Phyre 2 alignment of P0CE52 with d2bw3a2

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Job Description | P0CE52
Confidence | 3.55% | Date | Thu Jan 5 11:30:20 GMT 2012
Rank | 85 | Aligned Residues | 37
% Identity | 16% | Template | d2bw3a2
SCOP info | Ribonuclease H-like motif | Ribonuclease H-like | Hermes transposase-like
Resolution | 2.0

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | R | V | E | H | P | F | R | I | I | K | R | Q | F | G | F | V | K | A | R | Y | K | G | L | L | K | N | D | N | Q | L | A | M | L | F | T | L | A | N | L | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Sequence |  | A | A | S | E | R | T | F | S | L | A | G | N | I | I | T | E | K | R | N | R | . | . | . | I | G | Q | Q | T | V | D | S | . | L | L | F | L | N | S | F | Y | K
Template Known Secondary structure |  | T | T | T |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T | T |  | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 569 | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . |  |  |  | . | 590 | . | . | . | . | . | . |  | . | . | . | 600 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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