Phyre 2 alignment of P10905 with c1bctA_

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Job Description | P10905
Confidence | 1.12% | Date | Wed Jan 25 15:20:37 GMT 2012
Rank | 99 | Aligned Residues | 28
% Identity | 18% | Template | c1bctA_
PDB info | PDB header:photoreceptor | Chain: A: PDB Molecule:bacteriorhodopsin; | PDBTitle: three-dimensional structure of proteolytic fragment 163-2312 of bacterioopsin determined from nuclear magnetic3 resonance data in solution
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | R | P | V | F | R | S | R | W | L | P | Y | L | L | V | A | P | Q | L | I | I | T | V | I | F | F | I | W | P | A | G | E | A | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | P | E | V | A | S | . | . | . | . | . | T | F | K | V | L | R | N | V | T | V | V | L | W | S | A | Y | P | V | V | W | L | I
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Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 164 | . | . | . | . | . |  |  |  |  |  | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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