27/01/2012 05:55:17 : INFO  : Run start: Fri Jan 27 05:55:15 GMT 2012
27/01/2012 05:55:22 : INFO  : Initialised job
27/01/2012 05:55:25 : INFO  : Renaming log file 'phyre2_20120127_055514.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/08543d9e34881e8a/phyre_20120127_055514.log'
27/01/2012 05:55:26 : INFO  : Initialised job:
Sequence
>batch____
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFV
TLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPA
VAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAA
LQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSG
GPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ

27/01/2012 05:55:27 : INFO  : Checked sequence
27/01/2012 05:55:31 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 05:55:32 : INFO  : PSI-BLAST 3 iterations
27/01/2012 05:58:15 : INFO  : PSI-BLAST 5 iterations
27/01/2012 06:02:14 : INFO  : Finished PSI-BLAST
27/01/2012 06:02:17 : INFO  : Running Buildali to generate a3m file
27/01/2012 07:34:05 : INFO  : Converting to HMM
27/01/2012 07:34:13 : INFO  : Calibrating HMM
27/01/2012 07:34:27 : INFO  : Searching HMM database
27/01/2012 07:39:40 : INFO  : Finished buildali
27/01/2012 07:39:44 : INFO  : Predicting secondary structure
27/01/2012 07:39:50 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 07:39:52 : INFO  : Predicting Disordered regions
27/01/2012 07:39:57 : INFO  : Predicted Disorder (Disopred)
27/01/2012 07:39:58 : INFO  : Running memsat_svm check
27/01/2012 07:41:43 : INFO  : Globular protein
27/01/2012 07:41:44 : INFO  : Predicted Transmembrane (memsat_svm) ID '08543d9e34881e8a'
27/01/2012 07:41:45 : INFO  : Initialising fold library search
27/01/2012 07:41:49 : INFO  : Initialised search input
27/01/2012 07:41:51 : INFO  : Building Ensemble models
27/01/2012 07:41:54 : INFO  : Building hh.c3fh6F_.model.1.pdb
27/01/2012 07:42:09 : INFO  : Building hh.c2r6gF_.model.2.pdb
27/01/2012 07:42:21 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/08543d9e34881e8a/hh.c2r6gF_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/08543d9e34881e8a/c2r6gF_.2.pdb
27/01/2012 07:42:25 : INFO  : Building c3fh6F_.1.pdb
27/01/2012 07:42:39 : INFO  : Building c2r6gF_.2.pdb
27/01/2012 07:42:55 : INFO  : Building d2r6gg1.3.pdb
27/01/2012 07:43:11 : INFO  : Building d2r6gf2.4.pdb
27/01/2012 07:43:26 : INFO  : Building d2onkc1.5.pdb
27/01/2012 07:43:40 : INFO  : Building c2onkC_.6.pdb
27/01/2012 07:43:55 : INFO  : Building d3d31c1.7.pdb
27/01/2012 07:44:09 : INFO  : Building c3d31D_.8.pdb
27/01/2012 07:44:21 : INFO  : Building d3dhwa1.9.pdb
27/01/2012 07:44:35 : INFO  : Building d2r6gf1.10.pdb
27/01/2012 07:44:53 : INFO  : Building c1umqA_.11.pdb
27/01/2012 07:45:12 : INFO  : Building d1umqa_.12.pdb
27/01/2012 07:45:29 : INFO  : Building d1fipa_.13.pdb
27/01/2012 07:45:41 : INFO  : Building d1ntca_.14.pdb
27/01/2012 07:45:54 : INFO  : Building d1etob_.15.pdb
27/01/2012 07:46:06 : INFO  : Building d1etxa_.16.pdb
27/01/2012 07:46:20 : INFO  : Building c3e7lD_.17.pdb
27/01/2012 07:46:33 : INFO  : Building d1g2ha_.18.pdb
27/01/2012 07:46:47 : INFO  : Building c2hx6A_.19.pdb
27/01/2012 07:47:01 : INFO  : Building c2cw1A_.20.pdb
27/01/2012 07:47:51 : INFO  : Finished HH model building
27/01/2012 07:47:53 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 07:48:47 : INFO  : html domain output complete ID '08543d9e34881e8a'
27/01/2012 08:26:35 : INFO  : Run end  : Fri Jan 27 08:26:34 GMT 2012
