Phyre 2 alignment of P10905 with c3ipdB_

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Job Description | P10905
Confidence | 1.63% | Date | Wed Jan 25 15:20:37 GMT 2012
Rank | 60 | Aligned Residues | 31
% Identity | 6% | Template | c3ipdB_
PDB info | PDB header:exocytosis | Chain: B: PDB Molecule:syntaxin-1a; | PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21
Resolution | 4.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | S | S | R | P | V | F | R | S | R | W | L | P | Y | L | L | V | A | P | Q | L | I | I | T | V | I | F | F | I | W | P | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | K | A | V | K | Y | Q | S | K | A | R | R | K | K | I | M | I | I | I | C | C | V | I | L | G | I | I | I | A | S | T | I
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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