 |
| Job Description | P10905 | | Confidence | 1.32% | Date | Wed Jan 25 15:20:37 GMT 2012 |
| Rank | 88 | Aligned Residues | 30 |
| % Identity | 20% | Template | c2l0kA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:stage iii sporulation protein d; |
PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna
|
| Resolution | UNK |
|
|   |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
. | . | 210 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | I | E | A | A | A | I | D | G | A | G | P | I | R | R | F | F | K | I | A | . |
. |
L | P | L | I | A | P | V | S | F | F |
| Query Conservation |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   | . | . |
|
|   |   |   |
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|
|   |
| Template Sequence |   |
V | R | V | I | A | K | E | F | G | V | S | K | S | T | V | H | K | D | L | T | E | R | L | P | E | I | N | P | D | L | A | N |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|