BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (311 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 624 e-177 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 470 e-131 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 355 1e-96 UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clo... 276 7e-73 UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerot... 273 6e-72 UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotro... 246 9e-64 UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding... 194 4e-48 UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding... 177 5e-43 UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein ... 176 7e-43 UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Str... 171 3e-41 UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostri... 167 6e-40 UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesor... 166 9e-40 UniRef50_A1STY3 Transcriptional regulator, periplasmic binding p... 163 6e-39 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 159 1e-37 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 157 6e-37 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 155 2e-36 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 154 3e-36 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 154 4e-36 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 153 7e-36 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 150 5e-35 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 147 5e-34 UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpe... 147 7e-34 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 145 2e-33 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 144 4e-33 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 142 1e-32 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 142 1e-32 UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional... 138 2e-31 UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 137 6e-31 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 136 1e-30 UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostri... 135 1e-30 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 135 2e-30 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 134 4e-30 UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 134 4e-30 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 134 5e-30 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 132 1e-29 UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostri... 132 1e-29 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 129 1e-28 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 127 5e-28 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 126 1e-27 UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Rei... 126 1e-27 UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostri... 125 1e-27 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 125 2e-27 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 124 4e-27 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 124 6e-27 UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-bindi... 124 6e-27 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 123 7e-27 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 123 7e-27 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 122 1e-26 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 122 1e-26 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 122 2e-26 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 121 3e-26 UniRef50_C3RC01 ABC-type sugar transport system n=5 Tax=Bacteroi... 120 6e-26 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 120 8e-26 UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Pr... 118 3e-25 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 117 6e-25 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 115 3e-24 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 114 4e-24 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 113 9e-24 UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 T... 111 4e-23 UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia... 110 5e-23 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 108 2e-22 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 107 5e-22 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 105 2e-21 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 105 2e-21 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 105 2e-21 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 105 2e-21 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 103 6e-21 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 103 7e-21 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 103 8e-21 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 103 8e-21 UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional... 102 1e-20 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 102 2e-20 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 101 3e-20 UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional... 100 5e-20 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 100 6e-20 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 100 8e-20 UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional... 100 9e-20 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 100 1e-19 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 100 1e-19 UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-... 99 2e-19 UniRef50_Q21X74 Periplasmic binding protein/LacI transcriptional... 99 2e-19 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 99 2e-19 UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional... 99 2e-19 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 98 3e-19 UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional... 97 5e-19 UniRef50_Q67RD5 Ribose ABC transporter ATP-binding protein n=7 T... 97 5e-19 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 97 6e-19 UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostri... 97 6e-19 UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional... 97 9e-19 UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transc... 96 1e-18 UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional... 96 1e-18 UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional... 96 1e-18 UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional... 96 1e-18 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 96 2e-18 UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional... 95 2e-18 UniRef50_Q2RKM1 ABC transporter substrate-binding protein n=3 Ta... 95 3e-18 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 95 3e-18 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 95 4e-18 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 94 5e-18 UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional... 94 5e-18 UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional... 94 6e-18 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 94 9e-18 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 93 1e-17 UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curviba... 92 2e-17 UniRef50_A1WGA7 Periplasmic binding protein/LacI transcriptional... 92 2e-17 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 92 3e-17 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 91 4e-17 UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional... 91 4e-17 UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional... 91 5e-17 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 91 5e-17 UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Paste... 90 8e-17 UniRef50_B5K960 ABC transporter, periplasmic sugar binding prote... 90 9e-17 UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Ba... 90 1e-16 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 90 1e-16 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 89 1e-16 UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 89 1e-16 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 89 2e-16 UniRef50_A7II12 Periplasmic binding protein/LacI transcriptional... 89 2e-16 UniRef50_C8NCI4 Ribose ABC superfamily ATP binding cassette tran... 89 2e-16 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 89 2e-16 UniRef50_C0Z4C9 Putative ABC transporter substrate binding prote... 89 2e-16 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 89 3e-16 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 89 3e-16 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 88 3e-16 UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium ... 88 3e-16 UniRef50_B1BAU0 Putative transcriptional regulator, periplasmic ... 88 3e-16 UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional... 88 3e-16 UniRef50_A7NNR8 Anti-sigma-factor antagonist n=2 Tax=Roseiflexus... 88 3e-16 UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette tran... 88 4e-16 UniRef50_Q89KM1 ABC transporter substrate-binding protein n=1 Ta... 88 4e-16 UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional... 88 4e-16 UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthroba... 88 4e-16 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 88 4e-16 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 88 5e-16 UniRef50_B2SY92 Periplasmic binding protein/LacI transcriptional... 87 6e-16 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 87 6e-16 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 87 8e-16 UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminoc... 87 1e-15 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 87 1e-15 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 87 1e-15 UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcri... 86 1e-15 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 86 1e-15 UniRef50_Q92YT4 ABC transporter, periplasmic solute-binding prot... 86 1e-15 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 86 2e-15 UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Ga... 86 2e-15 UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=P... 86 2e-15 UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional... 86 2e-15 UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Ta... 86 2e-15 UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding prot... 86 2e-15 UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette tran... 85 3e-15 UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alph... 85 3e-15 UniRef50_A6KXA9 ABC-type sugar transport system, periplasmic com... 85 3e-15 UniRef50_Q2S7D2 ABC-type sugar transport system, periplasmic com... 85 4e-15 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 85 4e-15 UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostri... 85 4e-15 UniRef50_C2BT70 Ribose ABC superfamily ATP binding cassette tran... 84 5e-15 UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional... 84 5e-15 UniRef50_C7GDR0 Transcriptional regulator, LacI family n=1 Tax=R... 84 6e-15 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 84 7e-15 UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 84 8e-15 UniRef50_C9A2C8 Periplasmic ribose-binding protein n=1 Tax=Enter... 83 1e-14 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 83 1e-14 UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantel... 83 1e-14 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 83 1e-14 UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional... 83 1e-14 UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaeros... 83 1e-14 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 83 1e-14 UniRef50_Q0SII4 ABC ribose transporter, substrate-binding compon... 83 2e-14 UniRef50_B2JDH5 Periplasmic binding protein/LacI transcriptional... 83 2e-14 UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding... 83 2e-14 UniRef50_C2AKV1 Monosaccharide ABC transporter substrate-binding... 82 2e-14 UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional... 82 2e-14 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 82 2e-14 UniRef50_D2PTU2 Periplasmic binding protein/LacI transcriptional... 82 2e-14 UniRef50_B0K232 Periplasmic binding protein/LacI transcriptional... 82 2e-14 UniRef50_C1B1U9 Putative ABC transporter substrate-binding prote... 82 3e-14 UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional... 81 4e-14 UniRef50_B5J7Y9 Putative uncharacterized protein n=1 Tax=Octadec... 81 5e-14 UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional... 81 5e-14 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 81 5e-14 UniRef50_UPI0001C3221B ABC-type sugar transport system periplasm... 81 5e-14 UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional... 81 6e-14 UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional... 80 7e-14 UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribos... 80 7e-14 UniRef50_Q1AZ05 Periplasmic sugar binding protein-like protein n... 80 8e-14 UniRef50_C5ENT7 Predicted protein n=3 Tax=Clostridiales RepID=C5... 80 8e-14 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 80 1e-13 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 80 1e-13 UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding... 80 1e-13 UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional... 80 1e-13 UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional... 80 1e-13 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 79 1e-13 UniRef50_A9KMR5 Putative solute-binding component of ABC transpo... 79 1e-13 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 79 2e-13 UniRef50_Q930Q0 ABC transporter, periplasmic solute-binding prot... 79 2e-13 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 79 2e-13 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding ... 79 2e-13 UniRef50_B9KPX1 Periplasmic binding protein/LacI transcriptional... 79 2e-13 UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional... 79 2e-13 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 79 2e-13 UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_UPI0001C31E06 ribose ABC transporter, substrate binding... 79 2e-13 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 79 3e-13 UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostri... 79 3e-13 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 78 4e-13 UniRef50_C0CHG6 Putative uncharacterized protein n=1 Tax=Blautia... 78 5e-13 UniRef50_B1G3A1 Periplasmic sugar binding protein-like protein n... 78 5e-13 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 78 5e-13 UniRef50_A1WMZ2 Periplasmic binding protein/LacI transcriptional... 77 6e-13 UniRef50_C7IGF5 ABC-type sugar transport system periplasmic comp... 77 6e-13 UniRef50_C0C383 Putative uncharacterized protein n=2 Tax=Clostri... 77 6e-13 UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional... 77 7e-13 UniRef50_C0D9P1 Putative uncharacterized protein n=1 Tax=Clostri... 77 8e-13 UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional... 77 8e-13 UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional... 77 8e-13 UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional... 77 9e-13 UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibac... 77 9e-13 UniRef50_C0BVF8 Putative uncharacterized protein n=1 Tax=Bifidob... 77 1e-12 UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI fa... 77 1e-12 UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional... 77 1e-12 UniRef50_A9HFZ1 D-ribose-binding protein n=1 Tax=Gluconacetobact... 76 1e-12 UniRef50_A0QZW4 D-ribose-binding periplasmic protein RbsB n=1 Ta... 76 1e-12 UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea l... 76 1e-12 UniRef50_A1SYE6 Transcriptional regulator, periplasmic binding p... 76 2e-12 UniRef50_C6PN50 Periplasmic binding protein/LacI transcriptional... 76 2e-12 UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminoc... 76 2e-12 UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional... 76 2e-12 UniRef50_C6C3I7 Periplasmic binding protein/LacI transcriptional... 76 2e-12 UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacte... 76 2e-12 UniRef50_C0EIT8 Putative uncharacterized protein n=1 Tax=Clostri... 75 2e-12 UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales b... 75 2e-12 UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional... 75 3e-12 UniRef50_B1ZDA2 Periplasmic binding protein/LacI transcriptional... 75 3e-12 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 75 3e-12 UniRef50_B1JS18 ABC transporter, periplasmic sugar-binding prote... 75 3e-12 UniRef50_A0LST2 Periplasmic binding protein/LacI transcriptional... 75 4e-12 UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic com... 75 4e-12 UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasm... 75 4e-12 UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales Rep... 74 5e-12 UniRef50_C0RMD7 Rhizopine-binding protein n=23 Tax=Brucella RepI... 74 5e-12 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 74 5e-12 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 74 6e-12 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 74 6e-12 UniRef50_C7Q346 Sugar ABC transporter substrate-binding protein ... 74 6e-12 UniRef50_A6M1U1 Periplasmic binding protein/LacI transcriptional... 74 6e-12 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 74 6e-12 UniRef50_A7NMH5 ABC-type sugar transport system periplasmic comp... 74 6e-12 UniRef50_B5CR03 Putative uncharacterized protein n=1 Tax=Ruminoc... 74 6e-12 UniRef50_A6U6C1 Periplasmic binding protein/LacI transcriptional... 74 7e-12 >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF Sbjct: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD Sbjct: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE Sbjct: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK Sbjct: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE Sbjct: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 Query: 301 FKLVDSILVTQ 311 FKLVDSILVTQ Sbjct: 301 FKLVDSILVTQ 311 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 230/300 (76%), Positives = 263/300 (87%), Gaps = 1/300 (0%) Query: 12 LVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQ 71 ++GL+ S S ++A EYAV+LKTLSNPFWV MK+GIE+EAK LGV VDIFASPSEGD+QSQ Sbjct: 13 ILGLVCSVSVYSA-EYAVILKTLSNPFWVAMKEGIENEAKALGVDVDIFASPSEGDYQSQ 71 Query: 72 LQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA 131 LQLFEDL NKNYKGIAFAPLS NLVMP A+A++KGIYLVNLDEKID+ NL+KA GNVEA Sbjct: 72 LQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDIKNLQKAKGNVEA 131 Query: 132 FVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLV 191 F+TTDNVAVG K A FI+DKLG+EGGEVAIIEGKAGNASGEARR GA E F K+S IKLV Sbjct: 132 FITTDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGAREVFVKSSSIKLV 191 Query: 192 ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDG 251 ASQPADWDRIKALDVATNVL RNPN+KA Y ANDTMAMGVAQAV NAGK GK+LVVGTDG Sbjct: 192 ASQPADWDRIKALDVATNVLSRNPNLKAFYVANDTMAMGVAQAVINAGKQGKILVVGTDG 251 Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +PEARKMV ++TAT+AQ+PA IGA GLKL+VDA ++GK IP+D P+ + VDSIL++Q Sbjct: 252 VPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGKQIPVDVEPKIETVDSILISQ 311 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 355 bits (912), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 183/287 (63%), Positives = 223/287 (77%), Gaps = 1/287 (0%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 AE A+VLKTLSNPFWV+MK+GIE EA G+ VDI A+ SE D Q QL+L E+L +K YK Sbjct: 45 AEIAIVLKTLSNPFWVEMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYK 104 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 I APLS VN + + A KKGIY+VN+DEK+DM+ LKK+GG+V AFVTTDNV VGAKG Sbjct: 105 AIGIAPLSPVNTIPAIVEANKKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAKG 164 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A +II KL EGGEVAIIEGK+GNASGE RR GATEAFK S+ KLVASQPADWDR KAL Sbjct: 165 AEYIIGKL-PEGGEVAIIEGKSGNASGEFRRQGATEAFKADSKFKLVASQPADWDRSKAL 223 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 DVA N++Q+ PN+KAIY NDTMA+G QAVANAGKTG++LVVGTDG PEAR ++ G++ Sbjct: 224 DVAANLIQKYPNLKAIYACNDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSIDEGKL 283 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ATVAQ+PA IGAT LK++++A K I D + V+S L+++ Sbjct: 284 NATVAQDPAMIGATSLKILIEAIKDKPQISPDIEAKEVPVESNLISK 330 >UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH1_9FIRM Length = 356 Score = 276 bits (706), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 142/285 (49%), Positives = 194/285 (68%), Gaps = 2/285 (0%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 +YAV+LKT + FWV M KG+E E GV VD++++ SE D + QL + E + Y G Sbjct: 66 KYAVILKTQATDFWVKMWKGVEAETAVKGVKVDLYSAQSEDDLEGQLTILESCIQQGYDG 125 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 IA APLS VN++ + A KGI +V++DEK D L GG AFV TDNVAVGAKGA Sbjct: 126 IAIAPLSGVNVLPGIGEATAKGITIVDVDEKFDETELANQGGACVAFVATDNVAVGAKGA 185 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +I+D G EG +VAIIEGK+GN S E R GA +AF ++ +++SQ ADWDR KA+D Sbjct: 186 QYIVDTAG-EGAKVAIIEGKSGNQSSEDRTQGAKQAFTDG-KMDIISSQAADWDRQKAMD 243 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 +A+ ++Q+NP++K IYC ND MA+G QAV NA K G++++VGTDG EA + +++ Sbjct: 244 IASTLIQQNPDLKGIYCCNDGMALGAVQAVINANKLGEIMIVGTDGDAEAVSSIANNELS 303 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 ATVAQ+PA IGAT L L+++A +SGK + PE V+S+LVT Sbjct: 304 ATVAQDPAQIGATSLDLLIEAVESGKKGEVGTFPEKTPVESVLVT 348 >UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGH9_9FIRM Length = 288 Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 148/286 (51%), Positives = 201/286 (70%), Gaps = 5/286 (1%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK-NYKGIA 87 +VLKTLSNPFWVDM GI+ EA+ LGV+ DIFA +E D QL+ ED N +Y G+ Sbjct: 1 MVLKTLSNPFWVDMADGIQAEAEKLGVTADIFAVDAETDIDGQLKKCEDAINSGSYDGLG 60 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP+++ NL+ V A +KG+ +VN+D KID D LK+AGG V F T+DN VGA GA + Sbjct: 61 VAPITATNLISAVVAANQKGMPVVNIDAKIDEDALKEAGGYVVGFATSDNHKVGAIGAQY 120 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK--ASQIKLVASQPADWDRIKALD 205 I+++L +GG+VAIIEG+AG+ SGE RR+G E + + + ++V QPADWDR KALD Sbjct: 121 IMEQL-PDGGKVAIIEGRAGDLSGELRRDGCKETLEADGSGKYQVVDVQPADWDRQKALD 179 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 VATN++ + P++ A + ANDTMA+GV QA+AN G TGK+L+VGTD E ++ ++AG M Sbjct: 180 VATNIITKTPDLNAFFVANDTMALGVMQAIANTGNTGKILLVGTDASDETKEAIKAGNMV 239 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A V Q+PA IGAT L ++VDA K+G+ D KLVD+ LVT+ Sbjct: 240 A-VCQDPAAIGATCLDILVDAIKAGETGSPDYEAVSKLVDANLVTK 284 >UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7J1_ABIDE Length = 360 Score = 246 bits (627), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 142/273 (52%), Positives = 182/273 (66%), Gaps = 6/273 (2%) Query: 18 STSAFAAAE-YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 ST++ A E YA+VLKT S+ FW DMK GIE+EA LGV VD+ + +E D + Q+Q+ E Sbjct: 61 STASVAGEEKYAIVLKTQSSQFWQDMKAGIEEEAAKLGVKVDVQSGNTEDDVEGQVQVLE 120 Query: 77 D-LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 + +S YK I AP+S VNL +A KGI +++DEKID L + GG + A+V T Sbjct: 121 NFVSTGEYKAIGVAPISDVNLNNAIAEGCSKGIVFIDIDEKIDAKALGELGGGLYAYVAT 180 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 DN VG GA ++ ++G EVAIIEGKAG SGE RR+ +A +A+ KLV SQP Sbjct: 181 DNKEVGETGAGELLKQVG-NNAEVAIIEGKAGALSGEQRRD-GAKAAFEAAGAKLVDSQP 238 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 ADWDR KA+DVATN++ NPN+KAIYC NDTMAMG +AV +GK + V GTDG +A Sbjct: 239 ADWDRTKAMDVATNMISANPNLKAIYCCNDTMAMGAVEAVKKSGK--DIKVCGTDGNDDA 296 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 K V G++ ATVAQNP +GAT L LMV A K Sbjct: 297 IKAVADGELAATVAQNPKLVGATALNLMVKAVK 329 >UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS39_9DEIN Length = 320 Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 118/309 (38%), Positives = 183/309 (59%), Gaps = 5/309 (1%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 + L + L L T FA A ++KT +NPFW M+ GI D A+ V++ + A Sbjct: 2 RLLTASTAVLAALAWGTLGFAQQLTIAALMKTTANPFWGAMEAGIRDAAQKGNVNLILQA 61 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 SE D + QL +L + + + A ++SVNL+ + +A ++ I +V+LD +D Sbjct: 62 VASETDVEPQLNACLNLLQRKPQALVVAAINSVNLLPCLKQANQQNIPIVDLDGNLDPAV 121 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE-GGEVAIIEGKAGNASGEARRNGATE 180 L++ G + +++DN GA A +++ KLG G+V +IEG AGN +G ARR+G TE Sbjct: 122 LQREGVKIAFSISSDNRRAGASAAEYVVSKLGQGFSGKVLVIEGLAGNVTGAARRDGFTE 181 Query: 181 AFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 K+ A ++VA+ P DWDR+KA ++ + LQR+P++ AIYCANDTMA+G +AV AG Sbjct: 182 RLKQIAPNAQIVATLPGDWDRLKAANITNDTLQRHPDLAAIYCANDTMALGAVEAVFAAG 241 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 K KVLVVGTDG +A K + AG++ A+VAQ P +G+ ++ ++ K +V P P Sbjct: 242 K--KVLVVGTDGNSDAVKSIRAGRLNASVAQLPFLVGSRAIENVLKVIKGEQVDPKIIVP 299 Query: 300 EFKLVDSIL 308 + +IL Sbjct: 300 TLVIDKAIL 308 >UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Synergistaceae RepID=C1TNC1_9BACT Length = 338 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 148/239 (61%), Gaps = 3/239 (1%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V++ TLSNP+WV MK+ + AK +G+SV++ A+P+E D +SQL E + K Y GI Sbjct: 54 VLVITLSNPYWVTMKERYGEWAKEMGISVEVMAAPTEKDLKSQLNTLEAMVAKKYDGIIV 113 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P+ NL+ + +A +KGI +V ++ D LK+AG ++ ++T G A + Sbjct: 114 TPMDPFNLIPGIVKADEKGIPVVCSGPEVSRDGLKQAGAVMDGWITATFKDQGRLCAEDM 173 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +KL G EVAIIEG G +ARR GA+E F+KA +KLVA + +WDR +A D+ T Sbjct: 174 AEKL-PSGSEVAIIEGIPGAGQSKARREGASEGFEKAG-LKLVAVEAGNWDRNRAYDITT 231 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 N+++ +P +K IYCAND MA+ A+ AG G V V GTD IPEA + +++G++ + Sbjct: 232 NLVKAHPQLKGIYCANDVMALAAVDALEVAGIEG-VTVYGTDFIPEAAEAIKSGRLAGS 289 >UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein n=1 Tax=uncultured bacterium RepID=C6L1I6_9BACT Length = 324 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 104/280 (37%), Positives = 168/280 (60%), Gaps = 2/280 (0%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 L+ T A A EY V++KTL+NPFW M +G+E A+ GV+ + A S+ + QL + Sbjct: 17 LLAVTPAMADGEYGVLMKTLANPFWGAMGQGVEAGAQEAGVAYYMQAVESDQAAEPQLNV 76 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + +N + A ++S NL+ + A GI +V+LD +D L G + + Sbjct: 77 CNTMLERNPVAMITAAINSTNLLPCLKSAQDAGIKVVDLDGNLDQAILDAEGIEITFRIG 136 Query: 135 TDNVAVGAKGASFIIDKLGAEG-GEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVA 192 +DNV GA+GA +++ +LGA+ G V +IEG +GN +G+ R +G + + A +++VA Sbjct: 137 SDNVLAGAQGAEYVVSQLGADATGPVLVIEGLSGNITGQKRASGFADKLAELAPGLEIVA 196 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 S P DWDR KA ++ ++L RNP + AI+ AND MA+G ++V AGK G+V++VG DG Sbjct: 197 SLPGDWDRGKAANITNDILTRNPGLVAIFAANDGMALGAVESVFAAGKGGEVIIVGVDGN 256 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 +A K + G++TA+VAQ P +G ++ + A + G+V Sbjct: 257 SDAVKSINEGRLTASVAQLPYLVGKQAVENVKIAVEGGEV 296 >UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Streptomyces RepID=B4UZK6_9ACTO Length = 322 Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 99/282 (35%), Positives = 162/282 (57%), Gaps = 4/282 (1%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 A+ A+V + +NP+W ++ G E K GV V++ A SE D + L+ + Y Sbjct: 20 AKIAIVTRNFTNPYWAALRDGAIAEGKKQGVKVEVQAGASETDSTGENAKISTLAGQGYN 79 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 P+++ N++ P+ ++ I ++NLD +ID + K+AG + +F+ +DN++ G + Sbjct: 80 CFGVVPVNATNVITPLVPVAQRKIPILNLDTQIDANASKQAGVSYASFIGSDNLSAGQQA 139 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 ++ +G +G EVAI++G AG +G R+ G TE K A ++ +VA+QPAD+D+ K Sbjct: 140 GEGLLKLMGGKG-EVAILQGIAGEQNGINRQKGFTE--KVAGKLDIVATQPADYDQAKGQ 196 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 V +L+ +P I I+ ANDTM +G AQAV NAG TGKV ++ DGI A + V+AG + Sbjct: 197 TVTEAILKAHPKITGIFAANDTMGLGAAQAVRNAGLTGKVSIISVDGISAALEAVKAGTL 256 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 + T++Q P G ++ +D KV AP L+DS Sbjct: 257 SGTISQYPYAEGQLAVQACIDLVAKKKVPSRIVAP-IALIDS 297 >UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFD0_EUBSP Length = 367 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 102/284 (35%), Positives = 163/284 (57%), Gaps = 2/284 (0%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A + TL+N FWV M++G ED A+ GVS+D+ A+ S+ D QL + ++ K+Y+ IA Sbjct: 81 AAIESTLTNSFWVTMQEGYEDTAEEYGVSIDVQATDSDTDTTGQLDILNNMLVKDYEAIA 140 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 +PL+ L+ + A + + ++ +++ D+LK+AGG ++A +T D G GA + Sbjct: 141 VSPLTEDCLISGIVAANQNDVKIITTGNEVNEDSLKEAGGKIDAKITVDFYNQGVLGAQY 200 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 IIDK + G+VA+I G G +ARR+GA E F+ A +++VA + D+D KA D A Sbjct: 201 IIDKTDGK-GKVAVIAGNEGATQSDARRDGAKETFEDAG-MEVVAVEQCDFDAQKAYDAA 258 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 +++ NP+I I C ND MA+GV +A+ +V VVG D EA+ +E G AT Sbjct: 259 AAIIESNPDIVGIACGNDDMALGVVRALEEKDVKDQVAVVGVDFTEEAKAAIEEGTYDAT 318 Query: 268 VAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 VA +P +G + +M+ A + V + + +VDS V Q Sbjct: 319 VAMSPYLMGKEAVIIMLKALEGQDVSKVGDSTPMAVVDSTNVDQ 362 >UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STD2_9RHIZ Length = 329 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 166/291 (57%), Gaps = 12/291 (4%) Query: 8 FSGTLVGLMLSTSAFA--AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 S L+ + SA A AA+ A ++K L NPF+ M+KGIE++AK GV+V + A+ + Sbjct: 9 LSAGLLATIAPVSAHAEDAAKVAAIVKGLDNPFFQTMQKGIEEQAKASGVNVSVQAAANM 68 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 GD Q ++ +++ P+S NLV + +K +VN+D ID + K A Sbjct: 69 GDATGQADRLTAMAMQDFDCYLVNPISVSNLVQALVPVAQKKKPIVNIDSTIDAEQAKAA 128 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 G V ++ TDNVA GA ++ KL +G +VA+I G G+ AR G FK+A Sbjct: 129 GFAVSTYIGTDNVAAGALAGEEML-KLVPKGSKVALIAGIVGDVGSNARIKG----FKQA 183 Query: 186 SQIKL--VASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 + KL V ADWDR KAL AT++L +P++ + AND MA+GV +AV +GK Sbjct: 184 VEGKLEVVVMVSADWDREKALTAATDILAAHPDLAGFFAANDIMALGVERAVQTSGK--D 241 Query: 244 VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 V V+G DGI +A K + AG+++ATVAQ P +GA GL+ A K GK +P Sbjct: 242 VKVIGLDGIVDALKSIAAGELSATVAQYPYVVGAMGLEACAVAAK-GKELP 291 >UniRef50_A1STY3 Transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STY3_PSYIN Length = 334 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 101/280 (36%), Positives = 156/280 (55%), Gaps = 3/280 (1%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+V+KTL+NPF+ +M++G K LG+++ + + E Q Q+ + DL + Sbjct: 57 ALVMKTLTNPFFKEMERGARRAEKDLGINLLVKTAAQETSIQQQIGIVADLIELKVDALV 116 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP SV L+ + A KGI ++N+D +D + KK G F++ DN K Sbjct: 117 IAPGDSVELIPILKHAQDKGIIVINIDNLLDQEYSKKVGLLNVPFISVDNELAAYKSTKV 176 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + +KL + EVAIIEG G + E R+NGA AF ++ LVA++ A+W +A ++A Sbjct: 177 LTEKL-TQPTEVAIIEGIRGALNAELRKNGAIRAFSESKFATLVATESANWKIDEAFELA 235 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 + +NPNI AI+CAND MA+GV + + + GK V VV D IP+A V++G + AT Sbjct: 236 AKLYNKNPNIGAIFCANDMMALGVIEYLQSTGK-DNVQVVAFDAIPQALNAVQSGVLLAT 294 Query: 268 VAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 V Q+ A+ G G+ L + SGK PL E K++ + Sbjct: 295 VDQDAAEQGYQGI-LSANNILSGKKTPLKITIEAKIITKL 333 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 157/287 (54%), Gaps = 8/287 (2%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A + A+V+KTL+NPF+++M+KG K LG+ + + + E + Q+Q+ EDL + Sbjct: 48 ARKIALVMKTLTNPFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIEDLIRMKF 107 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I AP S+ LV + A + GI ++N+D ++D + +K G F++ DN + Sbjct: 108 DAIVIAPGDSLRLVPVLKAAQEAGIRIINIDNRLDAEAMKGQGMAPVPFISVDNEKAAYE 167 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A FI ++ + + AI+EG + RR GA AF++ I+LVA + A+W + Sbjct: 168 SAGFIAREIH-KPAQAAILEGIRSADNSRQRRVGAERAFRENPLIRLVARESANWKIDEG 226 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 DV + +P+I ++CAND MA+G Q + +G+ G V V D + EA++ + +G+ Sbjct: 227 RDVTRRLFSDHPDITLLFCANDMMALGAIQFLQESGRYG-VKVAAYDALEEAKRAILSGR 285 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 M TV Q A+ G G+ L + +V+ + PE LV++ LVT Sbjct: 286 MEVTVNQQAAEQGYQGIIL------ASRVLNGEAVPEVVLVETSLVT 326 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 147/258 (56%), Gaps = 4/258 (1%) Query: 17 LSTSAFAA--AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 L AFAA + A+++KTLSN +++ M++G E+ AK + + + + E + + L Sbjct: 19 LPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQVAEKEDSTEQLVGL 78 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 E++ K I P S+ + +A K GI +++LD ++D + AG +V Sbjct: 79 VENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKAAEAAGLKFN-YVG 137 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 DN G A + + +G +G VAI+EG G +GE R+ GA +AF + IK+VASQ Sbjct: 138 VDNFNGGYLEAKNLAEAIGKKGN-VAILEGIPGVDNGEQRKGGALKAFAEYPDIKIVASQ 196 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 A+W+ +AL V TN+L NPNI I+ AND MA+G AV NAG GKVLV G DGIP Sbjct: 197 SANWETEQALTVTTNILTANPNINGIFAANDNMAIGAVTAVENAGLAGKVLVSGYDGIPL 256 Query: 255 ARKMVEAGQMTATVAQNP 272 A + V+ G+M T+ Q P Sbjct: 257 AIEYVKQGKMQNTIDQLP 274 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 145/265 (54%), Gaps = 10/265 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 AVVLK L++ +W ++ G D AK LGV V + +E D Q L ED K + Sbjct: 42 AVVLKALNSDYWKTVQAGANDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDALV 101 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 APL + +A K+ I +V +D + D K +FV T N+A G G + Sbjct: 102 VAPLQPNAAITTFDKAEKEKIPVVLIDTDANWDKKK-------SFVGTGNIAAGKLGGEY 154 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 I KL +G E II G G+ + + R GA +A + A+ IK+V QPA+ +R KA+ V Sbjct: 155 ISKKL-KKGDEAIIIRGVPGDRTQDERTQGAQKALE-AAGIKVVEIQPANSEREKAISVM 212 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 N+LQ +PNIK ++C ND MA+G +A+ AGK ++ +G DG P+A K ++ G +T T Sbjct: 213 ENLLQTHPNIKGVFCTNDEMALGAVKALQQAGKK-NIISIGVDGSPDALKSIKEGGLTGT 271 Query: 268 VAQNPADIGATGLKLMVDAEKSGKV 292 VAQN DIG G++ V + KV Sbjct: 272 VAQNSYDIGKKGVETAVKVLRGEKV 296 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 161/297 (54%), Gaps = 20/297 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLS-----NPFWVDMKKGIEDEAKTLGVSV 57 K +K F + + +++ T AFA VL ++ NPFW +++G ++A LGV + Sbjct: 2 KLVKLFLASSLAIIIGTLAFAD----TVLLSMKGPGAGNPFWASVERGAREKAAELGVKI 57 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 + + P E D QSQ+ ED K IA A L + A GI +V +D K Sbjct: 58 VVLSPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTK- 116 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 + K F+ TDN A A FI D++ + G +VAI++G ++G+AR +G Sbjct: 117 ---GINKG----VTFIGTDNKAGAKMAADFICDRV-SRGSDVAILQGIITQSTGKARADG 168 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 A A K + +VA QPA+WDR + V N+L RN +KA++ +ND MA+G +A+ + Sbjct: 169 A-HAGLKGCGLNIVAEQPANWDRAQGRTVMENILTRNQKLKAVFASNDNMALGAVEALKD 227 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 A V+VVG D P+A K + AG+MTAT+AQ ++GA G++ ++ K G+ +P Sbjct: 228 ADMLNDVIVVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAK-GRSLP 283 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 161/298 (54%), Gaps = 16/298 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S L+ +S A A A+VL TL+NPF+V MK G E +AK LG ++ + Sbjct: 3 MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVL 62 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +L EDL+ + K I P S + + A + I ++ LD Sbjct: 63 --DSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRG---- 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + G V + + +DNV G FI K+G++ +V +EG AG ++ R G Sbjct: 117 ---ASRGEVVSHIASDNVVGGEMAGHFIEAKIGSDA-KVIQLEGIAGTSAARERGEGFMN 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K S+++L+ASQPAD+DR K L+V N+L NP+++A++ ND MA+G +A+ +GK Sbjct: 173 AVK-GSKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK 231 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL---MVDAEKSGKVIPL 295 + V++VG DG + VE GQ+ ATVAQ P IGA G++ M+ EK IP+ Sbjct: 232 S--VMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPV 287 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/268 (37%), Positives = 148/268 (55%), Gaps = 14/268 (5%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP 90 + T SNPF+V +KKG E+EA+ G++ + ++ D Q+ EDL K K I P Sbjct: 46 VSTQSNPFFVTLKKGAEEEAQKQGLT--LITVDAQDDPAKQIASIEDLIQKKVKVILVNP 103 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 S +V V A GI +V LD ++ GG V + V +DNVA G A ++++ Sbjct: 104 TDSDAVVGAVKAANAAGIPVVTLDRSVN-------GGEVASHVASDNVAGGKMAAEYLLE 156 Query: 151 KLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNV 210 K+G +G +V +EG G ++ R G + +A +K+V QPAD+DR K L V N+ Sbjct: 157 KIGNQG-DVVELEGIPGASAARERGQGFHDVIDQAKDVKVVGRQPADFDRAKGLSVMENI 215 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 LQ N N+K ++ ND MA+G QA+ AG V VVG D +A V+AG+M+ATVAQ Sbjct: 216 LQANKNVKGVFAHNDEMALGAVQALEAAGMK-DVTVVGFDATDDAVNAVKAGKMSATVAQ 274 Query: 271 NPADIGATGL---KLMVDAEKSGKVIPL 295 P IG T + K ++D + K +P+ Sbjct: 275 KPKLIGKTAVDAAKKIIDGQPVDKSLPV 302 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 154/281 (54%), Gaps = 13/281 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S L+ +S A A A+V+ TL+NPF+V MK G E AK LG ++ + Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIVL 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +L EDL+ + K I P S + + A + I ++ LD Sbjct: 61 --DSQNDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRG---- 114 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + G+V + + +DNV G +FI++K+G E +V +EG AG ++ R G Sbjct: 115 ---ASRGDVVSHIASDNVVGGEMAGNFIVEKVG-EKAKVIQLEGIAGTSAARERGEGFMN 170 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K S ++L+ASQPAD+DR K L+V N+L NP+++A++ ND MA+G +A+ +GK Sbjct: 171 AVK-GSHMELLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK 229 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 +V++VG DG + V G++ AT+AQ P IGA G++ Sbjct: 230 --EVMIVGFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIE 268 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 35/312 (11%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYA-------------VVLKTLSNPFWVDMKKGIE 47 M K L F+ L L LS + E+A + + TL NPF+V +K G+ Sbjct: 1 MKKTLTVFTA-LALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVV 59 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 EAK G+ V + ++ D Q EDL + + P S + V A G Sbjct: 60 KEAKKQGIEVIVV--DAQDDSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLG 117 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I +V LD + G VE V +DNV G A FI+++LG +G +VA +EG G Sbjct: 118 IPVVTLDRSAE-------NGKVETLVASDNVKGGQMAADFIVEQLG-KGAKVAELEGVPG 169 Query: 168 NASGEARRNGATEAFKKASQIKL--VASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 ++ R +G F K + KL +A Q AD+DR K L+V N+LQ NP+I+A++ ND Sbjct: 170 ASATRERGSG----FHKTADDKLNVIAKQTADFDRTKGLNVMENLLQGNPDIQAVFAHND 225 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL--- 282 MA+G +A+ ++GK ++LVVG DG +A K V+AG M+AT+AQ P IG ++ Sbjct: 226 EMALGAIEAIRSSGK--EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARD 283 Query: 283 MVDAEKSGKVIP 294 +++ +K K IP Sbjct: 284 ILNGKKVEKTIP 295 >UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX36_HERA2 Length = 335 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 15/289 (5%) Query: 4 YLKYFSGTLVGLM----------LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL 53 +L++ + T VGL+ +ST+ + +V+K+LSN F+ M+ G E+ A+ Sbjct: 22 FLRFGAFTTVGLLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQN 81 Query: 54 GVSVDIFAS--PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 D A+ E DF +Q+ FE L N+ Y I AP S+ LV PVA+A K GI ++ Sbjct: 82 ATRFDFTATGINDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVI 141 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASG 171 N+D +D + KKA G AF DN A GAK + ++ K GG+VA++EG + Sbjct: 142 NIDVALD-EATKKAAGIDLAFFGPDNRA-GAKMSGEVLAKALGAGGKVAVLEGNPEADNA 199 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 RR G +A S + LV ++ W+ + + L++ P+++ I CAND+MA G Sbjct: 200 VQRRLGFDDAIADGS-LNLVVAESGHWETSEGQSITAAWLKKYPDLQGIMCANDSMAFGA 258 Query: 232 AQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 QA+ A K+ VVG D IP + +++ G+M ATV Q A + A G+ Sbjct: 259 VQALEAANLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGM 307 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 143/254 (56%), Gaps = 14/254 (5%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 AVVLKTLS+P+W ++ G + K LGV V + +E + Q+ + ED N++ + Sbjct: 40 AVVLKTLSSPYWKYVEAGAKAAGKELGVDVTVVGPNAESEVMQQINMIEDQLNQSPGALV 99 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 +P S + V+PV + L++ D K+ N +F+ T+N G +G Sbjct: 100 VSP-SQPDTVVPVLETATVPVLLIDTDAKLK---------NKTSFIGTENYEAGYEGGK- 148 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 ++ L +G +VAII G GN + + R GA A ++A + +VA QPAD D+ KA+ V Sbjct: 149 LLSSLLQKGDKVAIISGALGNTATDERVKGAKAALEEAGMV-IVAEQPADSDKTKAMSVM 207 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 N+LQ+N ++K ++ AND MA+GV +AV G V V+GTDG EA + + G++ T Sbjct: 208 ENILQKNNDVKGVFAANDDMALGVLRAVEAKGL--DVKVIGTDGTLEAVESILDGKLAGT 265 Query: 268 VAQNPADIGATGLK 281 +AQNP +G G+K Sbjct: 266 IAQNPYKMGYEGVK 279 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA-----EYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 MN K FS L+ +ML TS + +VL TL+NPF+V+MK G E EA+ LG Sbjct: 1 MNINKKIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGY 60 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 D+ S+ D + EDL + P S +V V A K I ++ LD Sbjct: 61 --DLVVLDSQNDPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDR 118 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIE--GKAGNASGEA 173 + + GG + + + +DN+ G A +++DK E G + ++E G G ++ Sbjct: 119 QAN-------GGKITSHIASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRD 171 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQ 233 R G K + ++ Q AD+DR K L V N++Q NPNI+ ++ ND MA+G + Sbjct: 172 RGEGFHNIMDKNDKFNFISIQAADFDRQKGLQVMENIIQANPNIQVVFAHNDEMALGAVK 231 Query: 234 AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL 282 A+ +G LV+G DG +A+ ++A +MTA +AQ P IGA G++L Sbjct: 232 AIKASGINA--LVIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVEL 278 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 16/271 (5%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP 90 + TL+NPF+V M G+++EAK LGV V I D +QL EDL ++ I P Sbjct: 51 VSTLNNPFFVAMSNGVQEEAKKLGVQVTILNG--NNDPATQLNQVEDLIQQHVNAIILNP 108 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 S +L V +A + I ++ LD + GNV F+ +++V G A +I Sbjct: 109 TDSQSLSTAVEQANRAHIPVITLDRSVTK-------GNVACFIASNSVEAGKMAADELIK 161 Query: 151 KLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNV 210 LG +G +V ++G G ++ R G E KA I++VA Q A++DR +AL+V N+ Sbjct: 162 ALGGKG-QVVELQGVIGTSAEADREKGFDEEIGKAPGIRVVARQTANFDRSQALNVMQNI 220 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 LQ +PNI+ ++ ND MA+G +A+ AGK + +VG DG EA V G + A +AQ Sbjct: 221 LQAHPNIQGVFAQNDEMALGALKAIQEAGKH-NIKIVGIDGEKEAVNDVHKGLLYADIAQ 279 Query: 271 NPADIGATGLKL---MVDAEKSGKVI--PLD 296 P G G++ +V+ EK K + PL Sbjct: 280 QPVQEGILGVEYAVKLVEGEKVPKQVNSPLH 310 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 156/292 (53%), Gaps = 14/292 (4%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 +K S L+ + S SA A A+VL T++NPF+V MK G E +A LG + A Sbjct: 7 HKVSVLLSAALLSVSTSFSASAQDAIAIVLSTMNNPFFVTMKDGAEAKAAELGYK--LIA 64 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 S+ D +L EDL+ + K I P ++ + + A + I ++ LD Sbjct: 65 LDSQNDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDRT----- 119 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 A G++ + + +DN+A G FI +LG + +V +EG AG ++ R G + A Sbjct: 120 --AAHGDIVSHIASDNIAGGELAGEFIAQQLG-KNAKVIQLEGIAGTSAARERGEGFSNA 176 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 A+ +L++SQPAD+DR K L+V N+L N +++A++ ND MA+G +A+ AGK Sbjct: 177 VT-ANNFELLSSQPADFDRSKGLNVMENMLAANGDVQAVFAQNDEMALGALRAIEAAGK- 234 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 +LV+G DG E V Q++ATVAQ P +GAT + + D G+V+ Sbjct: 235 -DILVIGFDGTDEGIAAVRRQQLSATVAQQPELLGATAI-MTADRILKGQVV 284 >UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=A1AYL7_PARDP Length = 348 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 142/255 (55%), Gaps = 9/255 (3%) Query: 30 VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFA 89 V K L+N +W + +G ++ GV + A+PSEGD QL + E++ + Y+G+ + Sbjct: 61 VSKALTNEYWRSLGEGYKNMTDAQGVGLAYQAAPSEGDQLGQLSIAENMILQGYQGLLVS 120 Query: 90 PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 P + NL + A +GI +VN+++ + + + + GNV+ DN G + A + I Sbjct: 121 PQTDNNLQPAMETAASRGIAVVNVNDAV-IPSATQYVGNVQ----RDN---GVRVAQWFI 172 Query: 150 DKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATN 209 D GG+VA IEG+ G + R +G T +A ++VAS PA+W R +A D A+ Sbjct: 173 DNRPG-GGKVAAIEGQPGVFAAGQRTDGFTTTITEAGNFQVVASVPANWSREQAYDAAST 231 Query: 210 VLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVA 269 +LQ++P++ Y ND MA+GV +AV A +V V GTDGIP+A + AG +T TV Sbjct: 232 ILQQHPDLIGFYANNDGMALGVVEAVKAANLQEQVSVFGTDGIPDAYASIRAGDLTGTVD 291 Query: 270 QNPADIGATGLKLMV 284 P G +++++ Sbjct: 292 SFPVLTGEVAMEVVL 306 >UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5Z3_LARHH Length = 332 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 144/260 (55%), Gaps = 5/260 (1%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL-SNKNYKGI 86 A+V+K+LSNP++++M+KG + + A E Q+Q +D+ +NK I Sbjct: 52 ALVMKSLSNPYFIEMEKGARQAQTENRAELFVKAVGLETSIDQQIQFIDDIINNKLADAI 111 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P S L +ARA K GI+++NLD ++D D L + G F+ DN K A+ Sbjct: 112 IIVPADSSRLAPVIARAHKAGIHIINLDTRLDADALAQEGIGPLPFIGVDNHRAAYKAAA 171 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 + L + EVAIIEG + + R GA +A + A ++LV SQ + W +A ++ Sbjct: 172 HLAASLPPK-SEVAIIEGNSNAINALRRSEGARQALEAAG-MRLVPSQ-SSWTIEQAYEI 228 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N+L++NP ++ IYC +D +A+GV + +A+ G +V V G DGI +AR + + QM A Sbjct: 229 TGNLLKQNPELRGIYCISDLIALGVIRYLADHG-IRQVKVAGFDGIAQARAALASNQMVA 287 Query: 267 TVAQNPADIGATGLKLMVDA 286 TV Q PA+ G +K +DA Sbjct: 288 TVDQRPAEQGYLSVKAALDA 307 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 17/259 (6%) Query: 30 VLKTLSNPFWVDMKKGIEDEAKTL-----GVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 V K N +W +K+G E + +++D+ ++ EGD Q QL + ED+ NK Y Sbjct: 76 VAKAFENEYWRTLKEGEELGTQKFKENGYNITLDMKSAQGEGDEQGQLSIVEDMINKKYT 135 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + +P+S NLV V +A K I ++N+++ I +K N + FV + G Sbjct: 136 ALLLSPISDGNLVPGVEKAKKNNIPVINVNDGI----IK----NADIFVGPKAIMNGELA 187 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKA 203 A +I K+G EG EVAI+ G + R G K A+ +K+V Q ADWDR KA Sbjct: 188 AEWISKKIGGEG-EVAIVIGMPKAFAARQRTLGFENWMKSNAAGVKIVEKQNADWDRAKA 246 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D+A +++ PN+KAI+C ND MA+GV +AV NA K +LVVG DGI EA + + G+ Sbjct: 247 KDLAEIWIKKYPNLKAIFCNNDVMALGVQEAV-NASKR-DILVVGVDGIKEAYESIRKGE 304 Query: 264 MTATVAQNPADIGATGLKL 282 M ATV P G +++ Sbjct: 305 MDATVDSFPLYKGQIAVEM 323 >UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQT3_9CLOT Length = 354 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/252 (36%), Positives = 135/252 (53%), Gaps = 8/252 (3%) Query: 32 KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 91 KTL+NP+W+ + + A LGV + I E D + Q+ + E K I + Sbjct: 56 KTLNNPWWISVSDFAQQTADNLGVDLTIAIPQEEVDLEKQVSMIEAAIEKKADAIVVSAA 115 Query: 92 SSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDK 151 SS ++ + +A + GI +VN D +I ++ ++AFV D+VA K +I ++ Sbjct: 116 SSDGVIPAIKKAREAGIKIVNFDTRISDTSV------IDAFVGGDDVAGAYKAGKYICEQ 169 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 LG EG EVAII G ++G R G +A + IK+VA Q A+W KA DV TN+L Sbjct: 170 LGGEG-EVAIITGLMEQSTGVDRHAGFMQACAEYPGIKVVAEQGAEWSSDKAADVTTNIL 228 Query: 212 QRNPNIKAIYCANDTMAMG-VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 NPN+KAI+ ND MA+G V A A K +++VG DGI +A M G + A V+ Sbjct: 229 TANPNVKAIFACNDQMAVGMVNAAKAAGKKADDLILVGYDGILDAVNMTMDGDLDAFVSL 288 Query: 271 NPADIGATGLKL 282 D GA G+KL Sbjct: 289 PNLDEGAMGVKL 300 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 139/248 (56%), Gaps = 14/248 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L TL+NPF+V +++G+E+ A V I + ++ D +Q EDL + I Sbjct: 54 VSLSTLNNPFFVSIREGVEEAAGKENVETVI--TDAQNDSSTQNNQVEDLITQGVDLIVI 111 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P+ S + V +A + I ++ +D D G + +F+ ++NV G +I Sbjct: 112 NPVDSTAIATSVEKANEANIPVICVDRGSDQ-------GELVSFIASNNVEGGKLAGEYI 164 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 ++K+G E EV +EG G +S R G EA +I L+ASQ A++DR + + V Sbjct: 165 LEKVG-ENAEVIQLEGIPGASSTRERGEGFEEATN--GKINLLASQTANFDRAEGMTVME 221 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 N+LQ +P++KA++C ND MA+G ++A+ +GK V +VG DG +A K VE G ++ATV Sbjct: 222 NLLQAHPDVKAVFCQNDEMALGASEAIKASGK--DVTIVGFDGNEDAIKAVEEGNLSATV 279 Query: 269 AQNPADIG 276 AQ P ++G Sbjct: 280 AQKPKEMG 287 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 136/246 (55%), Gaps = 14/246 (5%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP 90 + TL+NPF+V +KKGIE EAK G+ V I ++ D Q EDL + + P Sbjct: 44 VSTLNNPFFVSLKKGIEKEAKKRGMKVIIV--DAQNDSSKQTSDVEDLIQQGVDALLINP 101 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 S + V A G+ +V +D + G VE V +DNV G A+FI D Sbjct: 102 TDSSAISTAVESANAVGVPVVTIDRSAEQ-------GKVETLVASDNVKGGEMAAAFIAD 154 Query: 151 KLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNV 210 KLG +G +VA +EG G ++ R +G + ++++V Q AD+DR K L V N+ Sbjct: 155 KLG-KGAKVAELEGVPGASATRERGSGFHNIADQ--KLQVVTKQSADFDRTKGLTVMENL 211 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 LQ +P+I+A++ ND MA+G +A+ ++GK +LV+G DG +A ++ +++ATVAQ Sbjct: 212 LQGHPDIQAVFAHNDEMALGALEAINSSGK--DILVIGFDGNKDALASIKDRKLSATVAQ 269 Query: 271 NPADIG 276 P IG Sbjct: 270 QPELIG 275 >UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9L7_LARHH Length = 330 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 91/287 (31%), Positives = 157/287 (54%), Gaps = 10/287 (3%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY- 83 A +V+K+ +NP++ ++ G G+ + I + + + Q++L +++ K+ Sbjct: 46 ARIVLVMKSPTNPYFSELANGASRAQLETGIDLSIKVAHEDDALEQQIRLIDEVIAKHQA 105 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I AP S+ LV +ARA K GI+++N+ +++ + G V ++ DN + + Sbjct: 106 DAIVIAPTDSIRLVPVLARARKAGIHVINIGNRLEPRIVALYGMPVVPLISIDNASAAYQ 165 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A + + L G +VAIIEG G + R GA +AF +A +++VA Q A W +A Sbjct: 166 VAGKLAEGL-PRGSKVAIIEGLLGTNNTRQRTEGALQAFSEAG-LRVVAKQSARWKGDEA 223 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 V +L+ P+++AI+C+ND MA+G A+ + G TG V + G DGI EAR + Q Sbjct: 224 YQVTAQLLRDYPDLRAIFCSNDMMALGAARYLREKGITG-VRLAGFDGITEARSALHQRQ 282 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + AT+ Q+ ++ G ++L VDA +G+ PL E LVD+ L+T Sbjct: 283 LVATIDQHASEQGYLAVRLAVDA-IAGR--PL---AEETLVDTELLT 323 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 139/260 (53%), Gaps = 23/260 (8%) Query: 30 VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFA 89 V KTL+N +W + +G + A LG+ A+ SEGD QL + E+L ++ + + F+ Sbjct: 62 VSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQGFNALLFS 121 Query: 90 PLSSVNLVMPVARAWKKGIYLVNLDEKI------DMDNLKKAGG-NVEAFVTTDNVAVGA 142 P + NL+ V A G+ ++N+++ + + N++K G NV + Sbjct: 122 PQTDANLIPAVEAATAAGVPVLNVNDAVIPSAANYVGNVQKGNGVNVANW---------- 171 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 FI ++ +GG+VA+IEG+ G + R G TE + ++VAS PA+W R + Sbjct: 172 ----FIANR--PDGGKVAVIEGQPGVYAAGQRTAGFTETITAGGKFEVVASVPANWSREE 225 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A + A+ +LQ+ P++ Y ND MA+GV +AV AGK +V V GTDGI +A V AG Sbjct: 226 AFNAASTILQQYPDLIGFYANNDGMALGVVEAVKAAGKAEQVAVFGTDGISDAYAAVRAG 285 Query: 263 QMTATVAQNPADIGATGLKL 282 +T TV P G +++ Sbjct: 286 DLTGTVDSFPVLTGEIAMEV 305 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 142/270 (52%), Gaps = 8/270 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF--ASPSEGDFQSQLQLFEDLSNKNY 83 E AVV K + FW +++G AK VD+ E D Q+ L ++ + Sbjct: 44 ELAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQGV 103 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 G+ +A + L +A +GI +VN+D D NV F TDNVA + Sbjct: 104 DGLVYAATDAKVLHDVTQQALDQGITVVNIDSGTD-----PQPENVPVF-ATDNVAAAER 157 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 +++++LG +GG+VA I + G A+ + R G K+ Q+KLVA Q ++ + +A Sbjct: 158 ATEYLVEQLGEDGGKVAFIPFQPGTATNDTRTEGFKNVLKENPQVKLVAEQSSESNYNRA 217 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 L V ++L +P++ AIY AN+ +G A+AV +AGK G++++VG D P+ K V G Sbjct: 218 LQVTEDILTAHPDLDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREGV 277 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVI 293 ++A +AQNP +G G+ V ++G+ + Sbjct: 278 VSALIAQNPFRMGYDGVNAAVKMIRTGEQV 307 >UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3L7_9CLOT Length = 378 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 2/245 (0%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V++ + SN FW MK E+ A+ LG+ + +F + +E D Q QL + + I Sbjct: 94 VLISSTSNEFWGTMKTRYEEAAEDLGIEIRVFEADAEDDTQGQLDALNTMVTMGFDAIIL 153 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 +P+ NL+ + A + I ++NL +D + L AGG+++ +T + G+ A+ + Sbjct: 154 SPIDGTNLIPGIVAANEAEIPVINLGPGVDAEALADAGGHLDGKITVNFEEQGSTVANDM 213 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 I ++ +GG+VAI+ G G R NGA F+ ++LVA+Q DWD KA + Sbjct: 214 ISRM-EDGGKVAILAGLEGAGQSVGRTNGAKTVFENTEGVELVAAQACDWDTEKAYEATK 272 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 ++L +P++K I+ ND MA+ QA+ G V+V G D +A+ +E G M ++ Sbjct: 273 DILTAHPDLKGIFACNDNMALAAVQALQEMGNK-DVMVYGVDYTTDAKAAIEDGTMMGSM 331 Query: 269 AQNPA 273 + A Sbjct: 332 TYSSA 336 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 20/285 (7%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP 90 + TL+N F+V +K G+E AK G D+ + + GD Q Q+ +L ++ + P Sbjct: 74 VSTLNNAFFVGLKAGVEKGAKEQGF--DLVQTNANGDAQQQVNDAINLLSQGVTALVLNP 131 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 + S ++ V +A I + LD D GG V +FV +DNVA+G A +I D Sbjct: 132 IDSKAIIPAVEKANAMNIPVFTLDRGSD-------GGKVTSFVASDNVALGQTAAKWIAD 184 Query: 151 KL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +L G+ G V + G G + R G ++ K IK+VA Q +D+ K+L+ Sbjct: 185 QLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAKYPDIKVVARQEGAFDQEKSLNA 244 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLVVGTDGIPEARKMVE 260 TN+LQ+ P I A++ AND +G +A+ NAG+ +LV+G DG +A + Sbjct: 245 MTNILQKYPQIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILVIGADGTAQALSAIR 304 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 AG+ AT++QNP + A L+ + D + K +P + A L+D Sbjct: 305 AGKQDATISQNPIQMAAKSLQFVAD-YTAKKDVPANYAWPTLLID 348 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 12/257 (4%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 +V+ TL+NPF+V +K+G E ++K LG ++ S+ D + EDL + Sbjct: 38 MVVSTLNNPFFVSLKEGAEKKSKELGY--ELLVLDSQNDPAKERSNIEDLIQGGISVLIV 95 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P S ++ V A K I ++ +D + + GG V + + +DN+ G +SFI Sbjct: 96 NPTDSDAVINSVQVANKANIPVITVDRQAN-------GGEVVSHIASDNIKGGELASSFI 148 Query: 149 IDKLGAEGG-EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 ID+L + +V ++G G ++ R G K S +KL++SQ A++DR + L V Sbjct: 149 IDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDKKSNLKLISSQAANFDRAQGLSVM 208 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 N++Q + A++ ND MA+G A+A+ A K K++VVG DG +A+ +E +++AT Sbjct: 209 ENIIQAQSDFDAVFAHNDEMALGAAKALKTANK--KIIVVGFDGDEDAKTAIEKSEISAT 266 Query: 268 VAQNPADIGATGLKLMV 284 VAQ PA +G+T ++ V Sbjct: 267 VAQQPALMGSTSIETAV 283 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 145/283 (51%), Gaps = 16/283 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 + + T +NPF+VD+K G++ A G+ +++ + ++ D Q++ E+L K I Sbjct: 70 LAMNTQTNPFFVDVKDGVQKAADEHGI--ELYITDAQDDPTIQMKDVENLITKKPDAIII 127 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 S +V + + GI + +D + + GG V + + D + G ++ Sbjct: 128 DTCDSDAIVSSIEACNEAGIPVFTMDREAN-------GGEVISHIGYDAIKSGRMAGQYL 180 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +D LG +G ++ I+G G + R G E K +++VA Q AD+DR K + V Sbjct: 181 VDTLGGKG-KIVEIQGIMGTNVAQNRSQGFNEVMKDNPDMEIVACQVADFDRAKGMSVME 239 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 N+LQ NP I +Y AND M +G +A+ AG+T +++ +G D I + ++AG++ AT+ Sbjct: 240 NILQANPEIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAMKAGKVDATI 299 Query: 269 AQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A+ P +G L D + +V P + ++D+ LVTQ Sbjct: 300 AEPPFFLGKAILNTAYDYLEGKQVEP------YVILDNQLVTQ 336 >UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF94_9GAMM Length = 319 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 3/257 (1%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 +V+K+L NPF++ M++G A LGV + + + +E + Q+ L ++ + Sbjct: 40 LVMKSLVNPFYIQMEQGARQAANELGVELIVRSGTNETLVEQQISLIDEQLAAGIDALVI 99 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 AP S+ ++ + RA + G+ +VN+D +ID + +++AG FV+ DN G A I Sbjct: 100 APADSIAILPVLIRANELGVKIVNIDNRIDTNAIQRAGLPAIPFVSVDN-EFGGYEAGKI 158 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 + +L + IIEG + RR+GA A ++ + I++VAS+ A W A + Sbjct: 159 LAELAGPDAKALIIEGPRSAINARERRDGARRALQE-NNIEVVASEVASWKLESAYALTQ 217 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 NV RNP + I+ AND MA+G A A L+ G D IP+AR V G++ T+ Sbjct: 218 NVHARNPELNVIFAANDMMALG-ALLYAQEHGLNDWLIAGFDNIPDARAAVREGRLAVTI 276 Query: 269 AQNPADIGATGLKLMVD 285 Q G G+ VD Sbjct: 277 DQQADRQGYQGVATAVD 293 >UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z738_9FIRM Length = 369 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 17/245 (6%) Query: 30 VLKTLSNPFWVDMKKGIEDEAKTL-----GVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + K+ SN FW + K G E K L VS+ I + E D Q + ++L N+ Y Sbjct: 78 IAKSFSNEFWRNFKNGYEQSEKVLKDAGVDVSIKIDGTTDESDEIGQQTMTDNLVNQGYN 137 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + +P+S NL V A K I +N+++ + + + FV D G Sbjct: 138 ALMLSPISDSNLTASVDNAKGKKIPTINVNDGL--------IASADYFVGPDAYQNGELA 189 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKA 203 A ++ +LG + G+VAI+ G A + R G K S + +VA Q ADWDR KA Sbjct: 190 AEWVSKQLG-DKGDVAIVIGMAKAFAARERTAGFKGWIKDNNSGLNVVAEQNADWDRQKA 248 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 ++A+ +Q+NP++KAI+C ND MA+GV +AV A K +LVVG DGI EA + AG+ Sbjct: 249 KELASTWIQQNPDLKAIFCNNDDMALGVVEAVEEAKK--DILVVGVDGIGEAYDSIRAGK 306 Query: 264 MTATV 268 + ATV Sbjct: 307 LDATV 311 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 14/260 (5%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + V L TLSNPF+V ++ GI+D AK +V + S ++ D Q EDL K Sbjct: 49 KVGVSLSTLSNPFFVSVRNGIQDLAKKNKTNVQV--SDAQNDTAKQNSNIEDLIQKKVDV 106 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + P+ S + V A GI ++ +D D GG V V +++ G A Sbjct: 107 LIINPVDSSAITPAVKDANDAGIPVITVDRSSD-------GGKVLTLVASNSTKGGQMAA 159 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++I+KLG + ++A ++G G ++ R G A K ++ +V+ Q A +DR K L Sbjct: 160 KYMIEKLGKDA-KIAELQGIPGASATRERGKGFDGAAK--GKLDIVSKQTAGFDRAKGLT 216 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 V N+LQ N +I I+ ND MA+G QAV AGK K+ +VG DG + K V+AG M Sbjct: 217 VTENILQGNGDIVGIFSQNDEMALGAVQAVKAAGK--KITIVGFDGEADGIKAVKAGDMA 274 Query: 266 ATVAQNPADIGATGLKLMVD 285 ATVAQ P ++G L+ D Sbjct: 275 ATVAQKPEEMGRLALQAAYD 294 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 141/275 (51%), Gaps = 12/275 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEG-DFQSQLQLFEDLSNKNYKG 85 + +V+ + ++ +W+ +K G ++ +G + +F P++ D Q Q+ L E+L N Sbjct: 53 FGLVVMSTNSDYWLTLKDGAQEAVDAIGGEL-VFTGPADNNDIQGQVSLMENLINSKVDA 111 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I PL S L PV +A GI ++ +D ++ D +F+ TDNVA G Sbjct: 112 ILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTDKYT-------SFIATDNVAGGRMAM 164 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +I+ +G G EV ++ AG S +AR GA E I ++ Q D+ +A+ Sbjct: 165 ERLIESIGGSG-EVVVVNALAGIPSNDARGQGAEEYAATVDGITVLPQQHC-LDQAEAMT 222 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 NV+ NPN+K I+ + A+G AQA+ + GK G++ +V D + K++E G + Sbjct: 223 ATENVIIGNPNLKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKLLEDGTID 282 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 A V Q P ++G G++ V A +G+ +P APE Sbjct: 283 ALVVQQPYEMGKIGIEYAVKA-LNGEEVPKTVAPE 316 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 86/264 (32%), Positives = 144/264 (54%), Gaps = 7/264 (2%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA--SPSEGDFQSQLQLFEDLSNKNYKGI 86 +++K+L+N F+ +M G E A+ G ++ A +E DF+SQ+ E+ + I Sbjct: 68 LIMKSLANEFFQNMMVGAEAHAEERG-DYELLAVGMQNETDFESQINAVENFITQGVDAI 126 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 AP S +V P+ RA + GI ++N D +D +++ G + AFV DN +GA+ A Sbjct: 127 VVAPADSRAMVRPLRRAMEAGITVINFDVALDTGAMEQQGIEL-AFVGPDN-RMGAEMAG 184 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 + + EGG V IIEG G + RR G +A ++L+ S+ A W+ +A V Sbjct: 185 NALGEALGEGGRVVIIEGNPGADNATQRRLGFEDAIATHG-LELLESRTAHWETEEANQV 243 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 +L +P+++ + AND+MA+GV +A+ AG+ +LVVG D +P M+E G+M A Sbjct: 244 FAAMLTAHPDLQGVMAANDSMAIGVIEALDAAGRD-DILVVGFDAVPAVLPMIEDGRMLA 302 Query: 267 TVAQNPADIGATGLKLMVDAEKSG 290 TV Q + A + L ++ ++G Sbjct: 303 TVDQFGQAMAANAIDLALEVLETG 326 >UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-binding protein n=82 Tax=Proteobacteria RepID=A3N967_BURP6 Length = 320 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 11/258 (4%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS--PSEGDFQSQLQLFEDLSNKNYKG 85 A+V+K+L+N F++ M+ G ++ K D+ + E D SQ+++ E + Sbjct: 39 ALVMKSLANEFFLTMENGAKEYQKHNASQFDLVTNGIKDETDTASQIRIVEQMIVSKVDA 98 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I AP S LV V +A GI +VN+D ++D D LK G NV FV DN KGA Sbjct: 99 IVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKGLNVP-FVGPDN----RKGA 153 Query: 146 SFIIDKLGAE---GGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 + D L G V I+EG + + R G +A K A+ K+V+ Q +W+ K Sbjct: 154 RMVGDYLAKRLKAGDAVGIVEGVPTTTNAQQRTAGFQDAMK-AAGAKVVSVQSGEWEIDK 212 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 VA +L PN+KA+ C ND MA+G AV AG+ GKV VVG D I + M++ G Sbjct: 213 GNAVAAAMLNEYPNLKALLCGNDNMAIGAVSAVRAAGRQGKVYVVGYDNINAIKPMLKDG 272 Query: 263 QMTATVAQNPADIGATGL 280 ++ AT Q A G+ Sbjct: 273 RVLATADQYAAKQAVFGI 290 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 G +T + +A L T +NPF+V M++ + +A LG++++ + + QS Sbjct: 36 TGDHTTTGSASAKTITFALSTQANPFFVQMRESAQKKADELGLAINFQDAADDSATQSN- 94 Query: 73 QLFEDLSNKNYKG---IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNV 129 L+N G + P S + V + + I +V +D ++ NV Sbjct: 95 ----QLANAAASGTGVVIINPTDSDAMAPAVQQLVDEKIPVVAVDRAVN-------NANV 143 Query: 130 EAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIK 189 +++ +DN G + A + D + EG E+ +++GK G+++ R G E K IK Sbjct: 144 ASYIASDNETGGKQAAKVLSDAINGEG-EILVLQGKTGSSASRERGKGFDEGLKDNPNIK 202 Query: 190 LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK-VLVVG 248 +VA Q A+++R K LDV TN+LQ +PN+KAI+ ND MA+G +A+ + K GK V V+G Sbjct: 203 VVAKQTAEFERAKGLDVTTNLLQAHPNVKAIFAENDEMALGAIEALGS--KAGKDVKVIG 260 Query: 249 TDGIPEARKMVEAGQMTATVAQNP 272 DG +A K ++ G+M A++AQ P Sbjct: 261 FDGAEDALKAIKDGRMYASIAQQP 284 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 157/307 (51%), Gaps = 23/307 (7%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE----GDFQSQLQ-L 74 +A + A + KT S+PFW M++G++ A+ LG+ + + + GD + Q+ + Sbjct: 73 TATQPWQIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKKQISTI 132 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 E + N + G+ AP S+ LV + +A ++GI ++ +D ID D + FVT Sbjct: 133 LELIDNNDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTDQ-------ILTFVT 185 Query: 135 TDNVAVGAKGASFIIDKLGAEGGE-----VAIIEGKAGNASGEARRNGATEAFKKASQ-- 187 DN G ++I KL + I+EG + RR G E K+A++ Sbjct: 186 FDNFEGGQILGEWVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKNY 245 Query: 188 -IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLV 246 ++++ + ADW+ KA + L++ P I I A+D MA+G ++AV A K+G +++ Sbjct: 246 SLEILDLKSADWETKKAKMITQAWLEKFPTIDVIMAADDQMAVGASEAVQEANKSG-III 304 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA-EKSGKVIPLDKAP-EFKLV 304 G DG P ++ GQ+ AT+ Q P + +LM+++ EK +PL + + + Sbjct: 305 TGFDGTPYGLNAIKTGQIDATINQLPRTQISLITQLMINSLEKEQTTLPLCQLIGQEQTE 364 Query: 305 DSILVTQ 311 +S+L+TQ Sbjct: 365 NSLLITQ 371 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 14/280 (5%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 TL+N + + + G + EA+ GV +++ A +QL + E++ GI P S Sbjct: 80 TLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQLGIIENMIANKVDGILLVPSS 139 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 S L + + + GI ++NLD K+ ++L G ++ F T+N GAK A + K Sbjct: 140 SDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDI-PFYGTNNYE-GAKLAGEYVAKN 197 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 +G + AI++G G + R NG E + +VA Q A+W+ + A N++ Sbjct: 198 FEKGTKTAILKGIEGQTNAADRYNGFIEG--AGDTVTVVAEQTANWEVDQGYTAAQNIIS 255 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 NP+++ +C ND M +G +A+ A ++ ++G D + EA +VE G+ ATVAQ P Sbjct: 256 ANPDVELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAVSEALNLVENGEFLATVAQYP 315 Query: 273 ADIGATGLKLMVDAEKSG----------KVIPLDKAPEFK 302 A++G G+ M+ G +VI D EFK Sbjct: 316 AEMGKLGVDNMLKIFDGGEAESYIDTGTEVITKDNVGEFK 355 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 128/246 (52%), Gaps = 10/246 (4%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLG--VSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 A ++K+L + F+++M + E + +SV+I A + + + Q+QL E Sbjct: 57 AFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQLVEQCITNKMDA 116 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I AP S +V + +A GI +V N K GG++ ++V N VG A Sbjct: 117 IVIAPCDSEGIVPAIKKANDAGILVVTA-------NTKANGGDIVSYVGAQNFDVGYSLA 169 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + + +KLG +G +V +IEGKAGN++ E R G EA K+ I+L+ASQPADWDR A+ Sbjct: 170 TALFEKLGGQG-KVILIEGKAGNSTSEERAEGFKEALKEYPGIELLASQPADWDRASAMT 228 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 V N LQ I + M +G +A+ +AG+ +++ + D + ++AG + Sbjct: 229 VMENCLQTYDQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDVISALKAGDLY 288 Query: 266 ATVAQN 271 A+ QN Sbjct: 289 ASGNQN 294 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 143/275 (52%), Gaps = 11/275 (4%) Query: 9 SGTLVGL-MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP-SEG 66 +G L G S S A+++K+ + +W+ +K G E AK G ++ IF P +E Sbjct: 17 AGVLAGCGQKSASDSTKKNIALIVKSTDSEYWLSVKAGAEKAAKEAGANI-IFKGPATEQ 75 Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 D Q ++ + ED N+ GI A + L+ PV A I LV +D +D D Sbjct: 76 DIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVTVDSGVDSDK----- 130 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS 186 V +F+ TDN ++ A + +G + G+V ++ G ++ R G + K S Sbjct: 131 --VASFIATDNEKAASQAADVCAELIG-KSGKVGVVNFVPGVSTAVQREKGFRDGMSKHS 187 Query: 187 QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLV 246 I+L+ +Q + D+ KA+ + ++L NP++KAI+ AN+ A+GVAQA+ G GKV V Sbjct: 188 GIELLKTQYSQSDKSKAMAITEDILTANPDVKAIFAANNRSALGVAQALKGKGVAGKVKV 247 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 V D P+ K +E G +TA + QNP +G G+K Sbjct: 248 VAFDADPDEIKGIEDGSITALIVQNPYKMGEEGVK 282 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 4/251 (1%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 TL+N + + + ++ LG+ +I A + QL + E+ ++ GI P + Sbjct: 89 TLNNEYHIIVANAVQQACNALGIKCEIQAGSQHASVEEQLTIIENYVSQGVDGIILVPAA 148 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 S L+ + I ++NLD K+D LK G ++ F TDN VG + + ++ Sbjct: 149 SEGLISALQECESANIPVINLDTKLDDSTLKTLGKDI-PFYGTDNY-VGGQLVGEEVAQM 206 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 +G + AI+ G G + + R NG + K + LVA Q A+W+ + N++Q Sbjct: 207 YPDGCKTAILRGVQGQTNDDDRYNGFLD--KAGDVVDLVAEQHANWETDQGYTAIQNIIQ 264 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 N +++ IYC ND M +G QAV AG T ++ + DG+ E + V G+ +T AQ P Sbjct: 265 ANKDLQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEGLQYVVDGKFVSTCAQQP 324 Query: 273 ADIGATGLKLM 283 +G G+ M Sbjct: 325 IKMGKLGVANM 335 >UniRef50_C3RC01 ABC-type sugar transport system n=5 Tax=Bacteroides RepID=C3RC01_9BACE Length = 282 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 139/258 (53%), Gaps = 6/258 (2%) Query: 29 VVLKTLSNPFWVDMKKG-IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 +V+K+L F+ MK+G I+ A + + + ++ + + Q+ L L ++ I Sbjct: 9 LVMKSLQADFFKVMKEGAIQYAAPLPFLDLVCVGTATQTEVKEQIDLMYSLIHQQVDAIV 68 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 P+ S LV P A +KGI ++N+D ++D L++AG V AFV DN A + Sbjct: 69 LVPIDSKALVQPAVEAVRKGIPVINIDIQLDAQLLEQAGVEV-AFVGPDNFAAAYEVGKL 127 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + KL E +VAIIEG A + + R+ G +A ++ ++LVAS+PADW+ KA +V Sbjct: 128 LGKKLRNED-KVAIIEGLAAADNAQQRKRGFIKAIEEKG-LRLVASEPADWETEKAAEVF 185 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 + R P++KA+YC+ND MA+GV Q + K + VVG D ++ + G++ AT Sbjct: 186 QAMWMRYPDLKAVYCSNDAMALGVLQQMQE--KKCYLPVVGFDNDAVMKEFLSTGKLVAT 243 Query: 268 VAQNPADIGATGLKLMVD 285 + + G++ +D Sbjct: 244 ADIFSSQMAVRGIEFALD 261 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 138/271 (50%), Gaps = 18/271 (6%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP 90 L +LSN F++ M+KG++D+ +G + + + GD QL EDL K + Sbjct: 48 LSSLSNAFFIGMEKGVKDKTSEIGCK--LIETNANGDIAKQLSDIEDLITKKVDILIVNA 105 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 L + +V V +A + I ++ LD + +++ F+ TDNV +G + A I+ Sbjct: 106 LDADAIVPAVKKAKEANIPIIFLDRGANSEDM-------TTFLETDNVKMGEQAAELILK 158 Query: 151 KL---GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 L G GG V IEG G ++ R G K ++K+VA Q D+++ K+++V Sbjct: 159 ALKDKGLNGGNVVEIEGLQGTSAARDRGKGFHNVMDKHKEVKIVAKQAGDFNQEKSMNVM 218 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAV------ANAGKTGKVLVVGTDGIPEARKMVEA 261 N+LQ NP I A++ ND +G +A+ AG + VVG DGI +A + V+ Sbjct: 219 QNILQANPKIDAVFGHNDDCTVGAEKAIIASNRMKPAGDKEHIFVVGIDGINQAIESVKK 278 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 G + +++Q+P +G +++ + A K +V Sbjct: 279 GNIDVSISQDPIGMGVQAVEVGLKAIKGEQV 309 >UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Proteobacteria RepID=A8I1T9_AZOC5 Length = 324 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 150/292 (51%), Gaps = 15/292 (5%) Query: 5 LKYFSGTLVGLMLSTSAFAAAE-YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 LK F L +L+TSAFAA E AV K +NP++ ++ G E AK +G V + Sbjct: 4 LKLFGVVLPAALLATSAFAADETIAVFTKNQTNPYFQTVRVGAEAAAKAMGAKVVHYIPT 63 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL- 122 QL ED+ K I F P+ +A G+ +N D KI + N+ Sbjct: 64 KPDSIPEQLSQIEDVIVKKPSAIVFVPVDY--------KAMVPGVEQIN-DAKIPVVNVT 114 Query: 123 -KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 + AGG AFV D+ ++G + +++ ++G +G V I+EG G+ + R G +A Sbjct: 115 DRSAGGKFLAFVGADDYSLGLETGRYLLKEMGGKG-NVVILEGVKGSLTNVDRVRGFNDA 173 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 K+ +KL+ASQPA++ R++ L V N++Q +P I + AND MA+G +A+ A + Sbjct: 174 LKEFKDVKLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANRK 233 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 K VVG +G EA +++G++ A+ N G G + + A + ++ Sbjct: 234 AK--VVGINGTKEAVDAIKSGKLLASGDYNGFLQGCIGTMVAIRALRKETIV 283 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 17/263 (6%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 F+VD++KG+++ A GV + I P+ GD +Q + ED + GI P+ S V Sbjct: 73 FYVDLEKGMQEVADAQGVKL-ITQDPN-GDLAAQTKQVEDFITQGVDGIVLCPIDSNAAV 130 Query: 98 MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 + GI LV D + AGG+V + + +DN G A FI ++LG G Sbjct: 131 TEAETINQAGIPLVTTD-------IAVAGGDVASHIASDNTLGGQLAAQFIGEQLGGTG- 182 Query: 158 EVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 +VA+I + E R G T+ +K I++VA Q + R K L V N+LQ NP+ Sbjct: 183 KVALINNPTITSLIE-RETGFTDTMAQKYPDIEIVAVQSGESKREKGLSVMENILQSNPD 241 Query: 217 IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADI 275 ++ ++ ND M +G QAV A + +++VG D EA K ++ G + A+VAQNP ++ Sbjct: 242 VQGVFAVNDMMGLGALQAV-QAAQRDDIVIVGFDATEEAVKYIKEGSALKASVAQNPVEL 300 Query: 276 GATGLKLM---VDAEKSGKVIPL 295 G T ++ M + E+ K IP+ Sbjct: 301 GKTTMETMLKVIAGEQVEKNIPV 323 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 143/283 (50%), Gaps = 14/283 (4%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V + T +NP++V M I+ AK + + S ++ D +QL ++ ++N I Sbjct: 53 VSISTTNNPYFVSMNNAIKSMAKEKNTKLTV--SDAQNDSATQLNNVQNFISQNVDAILI 110 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P+ S +V + A I ++ +D + GG V V +DNVA G K A+ Sbjct: 111 NPVDSDAIVPAIKAANNAHIPVIAMDRGSN-------GGTVLTTVASDNVAAG-KMAAQA 162 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 ++KL + +V + G G AS R + K + +++SQ A++DR L+ Sbjct: 163 VEKLVGKNVKVLELSGTPG-ASATIDRGKGFNSEAKTLGLNILSSQSANFDRTTGLNTTQ 221 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 N+LQ + +++AI+ ND MA+G A+AV G+ K+ + G DG E ++AG MTAT+ Sbjct: 222 NMLQSHKDVQAIFAQNDEMALGAAKAVQATGQ--KIAIFGIDGESETHDAIKAGTMTATI 279 Query: 269 AQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 AQ PA IG L+ D + K+ + +P + LVD V Q Sbjct: 280 AQQPAKIGEMALQATYDYYQGKKIAHMINSPIY-LVDKDNVDQ 321 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 10/270 (3%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 L F+ +K+ + EAK G+ V S + GD +Q+ +D ++ I + P + Sbjct: 50 LQADFFNQIKQSVTAEAKKKGIKV--IVSDARGDAATQVNQIQDFISRQVSAIIYIPAGA 107 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 +PV A + I +V +D G ++F+ +D+VA ++++ + G Sbjct: 108 TAAGVPVKAANRAKIPVVTVDRN-------PPGEPGKSFIASDSVAAARTLGNYVVKESG 160 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR 213 +G ++AI++G+ G R+ G +A K A IK+V+ QPADW + KA V+ ++LQ Sbjct: 161 GKG-QLAILQGQIGTTPQVDRQKGFGQALKNAPGIKVVSQQPADWAQDKAYSVSQDMLQA 219 Query: 214 NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPA 273 +P I ++ D MA+G AQAV +G K L+VG DG K V G + AT+ Q Sbjct: 220 HPGIDILWGQADAMALGAAQAVKASGSKKKHLIVGFDGDIAGLKAVRRGTVDATMVQQTR 279 Query: 274 DIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 +G + VD K KV P F L Sbjct: 280 KMGRMSVNTAVDIIKGKKVPAQQLQPAFLL 309 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 132/273 (48%), Gaps = 15/273 (5%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 A AE V LS PF+V M++ +EDEA LGV V + ++ + Q+ + + + Sbjct: 36 AEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVL--DAQNNSSKQISDLQAAAVQG 93 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA-FVTTDNVAVG 141 K + AP S L ++G+ ++++D I AGG V DNVA G Sbjct: 94 AKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNI-------AGGKTAVPHVGADNVAGG 146 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ-IKLVASQPADWDR 200 A +++ A G V +I G++S R G + K+V Q A+ R Sbjct: 147 RAMADWVVKTYPA-GARVVVITNDPGSSSSIERVKGVHDGLAAGGPAFKIVTEQTANSKR 205 Query: 201 IKALDVATNVL--QRNPNIKAIYCANDTMAMGVAQAVANAG-KTGKVLVVGTDGIPEARK 257 +AL V N+L R+ I C ND MAMG +AV AG + KV V+G D IPEA Sbjct: 206 DQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFDAIPEALA 265 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 ++AG+M ATV QNP T L+ VD KSG Sbjct: 266 RIKAGEMVATVEQNPGLQIRTALRQAVDKIKSG 298 >UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMU2_9FIRM Length = 369 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 127/269 (47%), Gaps = 7/269 (2%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+ + ++ N +W +G + A + GVS D+ S D QLQ +D + Sbjct: 55 AICIHSMDNEYWAQEAEGAKLAAASYGVSADVLTCDS--DDNKQLQGIKDYIAQYGDKAV 112 Query: 88 FA--PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 F P S+ N + G Y+ L + D K + A + D++A+G A Sbjct: 113 FVVDPSSTANTANIAELCEESGNYVAILAHRAD-GLYPKDYPHFVASLMLDDIAIGKATA 171 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + + +G EG +VA ++G G+ S R EA K I++V SQ A W + +A+ Sbjct: 172 KALFESIGGEG-QVAELQGLLGDDSATNRHKAFEEALKDYPNIEVVDSQTASWSQSEAMT 230 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 + N L + P++K +Y ANDTMA+G +A+ N G GK++V G DGI A V G M Sbjct: 231 LTENWLVKYPDLKGVYSANDTMALGAVEALKNKGLNGKIMVSGCDGIEAALNAVNDGDMV 290 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIP 294 T A N I G + A GK+ P Sbjct: 291 ITNANNGYMIAGYGASYAIQA-ALGKLDP 318 >UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSL0_9FIRM Length = 389 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 126/254 (49%), Gaps = 18/254 (7%) Query: 27 YAVVLKTLSNPFWVDMKKGIE---DEAKTLG--VSVDIFASPSEGDFQSQLQLFEDLSNK 81 +A +K N W ++ G E ++A G +SVD + E D + QL + +D K Sbjct: 94 FAGNVKAFENVVWQEIANGYEGFAEDATAAGCKLSVDTTSPMGESDEEGQLSILKDQVRK 153 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + +P+S N + + A + I + ++ + + + FV +++ G Sbjct: 154 GVNAVLLSPISDANCLPGIEAAHEADIPVYAVNNEFN---------GADMFVGPNSLEQG 204 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDR 200 A ++ +KLG G+VAI+ G A A R G E F S I++VA Q ADWDR Sbjct: 205 QLAAEWVNEKLGG-SGDVAIVMGMAKTAVTRNRTQGFEEWFADNDSDIQVVAKQNADWDR 263 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKM 258 +A DVA L+ P++KAI+C ND MA+GV +AV A T + V+G DG EA Sbjct: 264 SQAKDVAATFLKTYPDLKAIFCNNDVMALGVIEAVKEADLTLNKDIYVIGCDGQSEAYDS 323 Query: 259 VEAGQMTATVAQNP 272 + A +M AT+ P Sbjct: 324 IRANEMAATIDTFP 337 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 12/240 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 VVL ++N F+VDM +G A+ G V I+ S ++G+F +Q+ L E+ + I Sbjct: 64 VVLIDMTNQFFVDMIEGGNKAAEDYGCEV-IWKS-ADGNFDNQISLIENFIEQGVDCILV 121 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 PL S L + +A GI + + ++D++ + T N + + + Sbjct: 122 DPLDSEGLKPVIEKASAAGIPTITMAGQVDVET---------NYTTVYNDEENTRIIAEM 172 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 K+ E G+ A++ G GN + R+ G +K I +V QP +WD + A Sbjct: 173 TAKMIGEEGKTALLYGNKGNLVSDLRQKGYYAGMEKYPNITVV-EQPTNWDPPTGMKAAQ 231 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 +++ NP++KAI+C +D + + QAV AGK G+++V DG +A K VE+GQ T+TV Sbjct: 232 DLIAANPDLKAIHCISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDALKAVESGQFTSTV 291 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 148/267 (55%), Gaps = 24/267 (8%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 + L T NPF++ ++ G + +A LG+ + + + + + Q+ QL +D+S+ G+A Sbjct: 36 LALSTEKNPFFLQVRYGAQAKANELGIDLTVLDAGDDAEVQAA-QL-DDVSS----GVAV 89 Query: 89 A-PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 P S L V++ +KGI + +D I G +V A + ++N GA AS Sbjct: 90 VNPADSEALAPAVSQLNEKGIPAITVDRTI-------TGADVAALIDSNNTEGGAAAASV 142 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + + A+G EV ++ G G++S R G T+A + ++++VA++ AD+DR A D+ Sbjct: 143 LAKAIRAQG-EVIVLRGIEGSSSSAERYEGFTQAMAEHPRVRIVAAEAADFDRDTARDLV 201 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVA-NAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 T++L +P++ I+ ND MA+G A+ AGK V VVG DG E + V+ ++ A Sbjct: 202 TDLLADHPDVAGIFAENDEMALGAVDALGERAGK--DVKVVGFDGTEEGVRAVKNRKLVA 259 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVI 293 T+AQ +++GAT + E++GK++ Sbjct: 260 TIAQQSSELGATAI------EQAGKLL 280 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 19/302 (6%) Query: 11 TLVGLMLSTSAFAAAEYAV--VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD- 67 T +G ++TS A +Y + + K +NP+ V G+E K +G + I +P+ D Sbjct: 64 TGIGAQIATSVKAGGDYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTA-ITQAPTTADS 122 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 + Q+QL E++ ++ I S ++ V +A G+ ++ + D + G Sbjct: 123 VEEQVQLMENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGTPAAEDTFLRTG- 181 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 D G A + DKLG +G + I+EG AG ++ R NG + Sbjct: 182 -------VDYYESGYTMAKAVADKLGGKG-KFIILEGPAGASNAIERLNGINTGLSEYEG 233 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 I++VASQ A++ R + + V N++Q+ +I A+ ND A+G QA+ A VLV Sbjct: 234 IEIVASQTANFKRTEGMSVTENLIQQYTDIDAVIACNDESALGAVQAL-TAANMSDVLVC 292 Query: 248 GTDGIPEARKMVEAGQMTATVAQNPADIG----ATGLKLMVD-AEKSGKVIPLDKAPEFK 302 G DG +A V+ G M AT +P G A +K + D E GK IP A Sbjct: 293 GFDGSVDATNAVKEGTMFATYNTDPYGSGFVACAYAVKYLNDKTEPEGKFIPFPTAANDP 352 Query: 303 LV 304 LV Sbjct: 353 LV 354 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 8/264 (3%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 +V K + FW ++ G + + LGV V+ E + Q+ + E+ NK + Sbjct: 42 LVSKGYQHEFWRSVEAGAKKAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGI 101 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 A L L + +A I +V D + G +F+ TDN GA A Sbjct: 102 AALDPDALAVVAKKAMDAKIPVVTFDSNVK-------GDITSSFIATDNKVAGAM-AGEQ 153 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 + KL G+VAI+ G + R G EA K IK++ +Q +D D+ KAL + Sbjct: 154 LAKLINGKGKVAIVSHNPGTTTAIEREAGFREALAKYPDIKILNTQFSDGDKSKALAITL 213 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 +++ NP+I IY N+ G+A+ V G TGKV++VG D + K +E G ++ V Sbjct: 214 DIINANPDIAGIYGTNEPSIFGIAKGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLV 273 Query: 269 AQNPADIGATGLKLMVDAEKSGKV 292 Q+P ++G ++ + K KV Sbjct: 274 IQDPYNMGYQTVQQLYKLSKGEKV 297 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 IFA ++ D Q+ E+ I +P + L V+ A+ GI ++ LD KID Sbjct: 69 IFADAAQ-DNSKQIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVILLDRKID 127 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 D + F+ DNV +G +I D L +GG+V I+G G + G R NG Sbjct: 128 GDKYTQ-------FIGADNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGIDRDNGF 180 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 E KK +I++VA ADW R KA+ VA +LQ N I ND MA G A NA Sbjct: 181 REGIKKNDKIEIVAVNNADWLREKAITVAEEMLQTNDEIDLFLALNDPMAEGAYIAAKNA 240 Query: 239 GKTGKVLVVGTDGIP 253 G+ G +L VG DG+P Sbjct: 241 GREGDILFVGFDGLP 255 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/281 (29%), Positives = 139/281 (49%), Gaps = 19/281 (6%) Query: 21 AFAAAEYAVVLKTLS--NPFWVDMKKGIEDEAKTLGVSVDIFASPSE-GDFQSQLQLFED 77 A + +Y +VL T+ + W+ +K G E +AK LG F +P+E D Q+++ ED Sbjct: 43 ASSEKKYNIVLITMDSMDEHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMED 102 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 N+ I AP L V +A+ GI ++ +D + D +FV TDN Sbjct: 103 AINQKADAILIAPTDQTALTPVVEKAFDAGIPVILIDSPVKTDKYV-------SFVATDN 155 Query: 138 VAVGAKGASFIIDKLG---AEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVAS 193 + K A DKLG G++AII + G+ + R NG + K K I+++ + Sbjct: 156 I----KAAEMAADKLGELLGGKGKIAIISAQPGSGTTIMRENGFKDRLKEKYPDIQIITT 211 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 Q + D+ +AL+ A ++L +P++ Y N+ +G+A A+ GKV VVG D Sbjct: 212 QYSMGDKNRALNQALDILTAHPDLAGFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQ 271 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 ++ + A++ QNP +G G+++ VD + GK +P Sbjct: 272 ATINAIKENYIQASMVQNPYMMGYKGVEIAVD-KLQGKEVP 311 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 12/245 (4%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 ++ N F V++ ++ EA+ G+ ++ +E Q++ E + I P Sbjct: 47 SMQNEFIVNVHDEMDKEAQKAGI--ELITVDAERSALKQVEQVESFIAQKVDAIIMNPCE 104 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 VA+A I ++N++ + AFV +D+V FI DKL Sbjct: 105 VEASSPAVAKALAAKIPIINVN--------SETSSKPSAFVGSDDVESARIAMKFIADKL 156 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 G +G V ++ G G A+ R GA E K+ +KL+A Q +WDR KA+ + N +Q Sbjct: 157 GGKGN-VVMMHGYMGQAAQIKREQGAREILKQYPNLKLLAHQTGEWDRAKAMSLMENWIQ 215 Query: 213 R-NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQN 271 I A++ ND M +G +A+ +AG KV+VV D IP+A + V+ G + ATV QN Sbjct: 216 SYGSQINAVFAHNDEMGLGAVKALTDAGLKDKVIVVSIDAIPDALQAVKKGSLDATVFQN 275 Query: 272 PADIG 276 G Sbjct: 276 AEQQG 280 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 10/261 (3%) Query: 23 AAAEYAVVL--KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A+ +Y +++ K LS +W+ +K G E AK LG + E D Q+ + D N Sbjct: 27 ASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNVINDFVN 86 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K I A + L+ P+ RA + GI ++ +D I+ D + + T+N Sbjct: 87 KKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFPI-------SHIATNNKEA 139 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 K A + + +G +G EVA I AG A+ AR NG E I LVA Q + D Sbjct: 140 AKKAAEVLANIIGKKG-EVACIPFVAGAATSIARENGFKEGISNYKNIDLVAVQYSQSDY 198 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A+ V N+L +PN+K I+ AN+ A+G A+A+ GKT V++VG D ++ Sbjct: 199 ATAMKVTENILTAHPNLKGIFAANEAGAVGAARALKARGKTADVILVGFDAAQTEIDAMK 258 Query: 261 AGQMTATVAQNPADIGATGLK 281 G + A + Q P +G G+K Sbjct: 259 EGIIDALIVQRPYMMGYEGVK 279 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 14/316 (4%) Query: 1 MNKYLKY-FSGTLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTL 53 M+K +K+ F+ + L+++ + + A+ A++ ++ F++ M KG E+ AK L Sbjct: 1 MSKRVKWVFTVLTLSLLIAVAMYGLAQQQKKYTIALIPGLTTDGFYITMHKGAEEAAKRL 60 Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 GV + IF E +Q+ + + + I AP L+ P+ RA + GI ++ + Sbjct: 61 GVEL-IFQGGPEFSPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITV 119 Query: 114 DEKIDMDNLKKAG-GNVE---AFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNA 169 D I + + G GN + A+V +DNV G A + +G E G+V + K G + Sbjct: 120 DTFIGENGQYQTGKGNADFPLAYVASDNVEGGRIAARALAKAIG-EKGKVYVSNVKPGIS 178 Query: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 + + R G E KK I ++A+Q D D KA L RNP++ ++ AN A+ Sbjct: 179 TTDQREQGFKEEMKKYPGITVLATQYNDNDANKAASQLAAALARNPDLAGVFGANLFSAI 238 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G A V NAGK G V V D ++ G + V Q+PA++G ++ V A + Sbjct: 239 GAANGVKNAGKRGAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAVEWAVKA-LN 297 Query: 290 GKVIPLDKAPEFKLVD 305 G+ IP + ++D Sbjct: 298 GEKIPNRYGTGYTVID 313 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 87/278 (31%), Positives = 141/278 (50%), Gaps = 16/278 (5%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 L F+ +K+ +E E K GV I ++G+ +Q+ EDL + + + P + Sbjct: 38 LQADFFNQIKQSVEAEGKARGVK--IITVDAQGNSSTQVSQIEDLITRQIDALIYIPAGA 95 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 +PV A GI ++ +D N A G+ F+ +D+VA GAK + + K+ Sbjct: 96 TAAGVPVKAAKAAGIPVIAVDR-----NAPDAPGDT--FIASDSVA-GAKALAEYVGKVT 147 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR 213 G +AI++G+ G R G E K +K+VA QPA+W + K VA ++LQR Sbjct: 148 DGKGRIAILQGQLGTTPENDRAKGFQEGLKGFPGLKVVAEQPAEWAQDKGFAVAQDLLQR 207 Query: 214 NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPA 273 +PNI + D MA+G AQAV A + V+VVG DG K V +G + AT+ Q Sbjct: 208 DPNITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLKAVASGVLQATMTQQTQ 267 Query: 274 DIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +G + +D K+GK +P + +L++++L T+ Sbjct: 268 KMGRMAVASALDL-KAGKAVPKE-----QLLETVLTTK 299 >UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacillales RepID=C6D2L3_PAESJ Length = 332 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 18/271 (6%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 FW + G+ED A G +V + PSE + +Q + + + I A + N + Sbjct: 53 FWKVLITGVEDAANEFGANVTVIGPPSETEIDTQTEQLKQAIRQKPDAIVMAA-TDYNRL 111 Query: 98 MPVARAW-KKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL-GAE 155 +PVA+ K GI L+ +D +I+ D+ +F+ TDN+A G K + L + Sbjct: 112 VPVAQQIVKAGIKLITVDSRINSDD-------ALSFIATDNIAAGEKAGEEMAKLLPESS 164 Query: 156 GGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP 215 +VAI+ G +S R G + + S I++ ++ ++ KA ++ +L +P Sbjct: 165 SSKVAIMSYVYGTSSQLEREKGVRQWLEGHSHIEVASTLYSEGRLEKAYELTKELLSEDP 224 Query: 216 NIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADI 275 IK I N+ +G +A+ + G +GKV +VG D + K++E G + AT+ Q P ++ Sbjct: 225 GIKGIVGLNEPSTVGAGRAIRDLGLSGKVKLVGFDSSVDEVKLIEGGVLQATIVQKPYNM 284 Query: 276 GATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 G +K ++A + GK +P KL+D+ Sbjct: 285 GYLSVKTAIEAVR-GKKVP-------KLIDT 307 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/274 (30%), Positives = 134/274 (48%), Gaps = 12/274 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 E A+V K S FWV + +G +D A G +V ++ Q + ++ NK+ Sbjct: 37 EIAMVAKGFSQSFWVSVHQGADDAAAKYGATVTFNGPDNDSQVDKQADMVQNAINKSPDA 96 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 +A APL L V A I L D + + + + V T N VG A Sbjct: 97 VAIAPLDEAALTPAVQSAKSASIPLFAFDTAFETN-----ADAITSTVKTSNREVGKVAA 151 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVAS-QPADWDRIKA 203 +I L + G+ A+I +A+ RR+G + KK A +++V Q ++ D+ KA Sbjct: 152 ENLIALLNGK-GKYAVIAHSQTDATSTERRDGFLDYMKKNAPDMEMVGEVQYSNADQAKA 210 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG-KVLVVGTDGIPEARKMVEAG 262 D+A+ +LQ NP++ AI+ N+ +G A V +A K+G KVL+VG D ++ + G Sbjct: 211 QDIASAILQANPDLDAIFATNEATVVGAATPVESALKSGHKVLLVGVDSGKAQQQYIRDG 270 Query: 263 QMTATVAQNPADIGATGLKLMV---DAEKSGKVI 293 ++ +V+QNP IG ++ V + EK KVI Sbjct: 271 VISGSVSQNPYQIGYKTIENAVKSLNGEKIDKVI 304 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 7/257 (2%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ KT SNP++V +++ + +A G + A +GD + Q+ E++ + KGI Sbjct: 40 LITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAFDGDNEGQVTAIENMVGQGVKGILI 99 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P SS ++ + +A G+ ++ LD D ++ V+A TDN A G ++ Sbjct: 100 TPNSSTGVLDAIKKARDAGVVVIALDTATDPEDA------VDATFATDNKAAGVAQGKWV 153 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDVA 207 LG +V +++G G R +G E F + ++V + + D+ KA Sbjct: 154 KAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGLTDNSPEIVGQENTNGDQTKAQTAM 213 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 N+LQR P + A+Y N+ A G QA+ G+ +V + DG V+AG++ AT Sbjct: 214 ENLLQRAPGVNALYTINEPAAAGAYQAIQAVGRADQVTIGSIDGSCTGVADVKAGKIGAT 273 Query: 268 VAQNPADIGATGLKLMV 284 V Q PA + G++ +V Sbjct: 274 VMQFPAKMAELGVQAVV 290 >UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TUU8_ACIAC Length = 318 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 144/282 (51%), Gaps = 13/282 (4%) Query: 12 LVGLMLSTSAFAA--AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS--PSEGD 67 L G + + AFA + A+V+K+L+N F+ M+ G + K + A+ +E D Sbjct: 16 LAGGLFAQPAFAQDKPKVALVMKSLANEFFRTMEDGAKAHQKAHASEYTLVANGIKNETD 75 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 +Q+++ E + I AP S LV V A KGI +VN+D ++D + LK+ Sbjct: 76 TAAQIKMIEQAVAQKVNAIVLAPADSKALVPAVKAAVDKGILVVNIDNRLDANALKEKSL 135 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAE---GGEVAIIEGKAGNASGEARRNGATEAFKK 184 NV FV DN A GA + D L + G +V IIEG + + + R G +A K Sbjct: 136 NVP-FVGPDNRA----GAKLVGDYLAKQLKAGDKVGIIEGVSTTFNAQQRTLGFQDAMK- 189 Query: 185 ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKV 244 A+ I +V Q W+ K VA +L+ +P++ A+ ND+MA+G AV AGK GKV Sbjct: 190 AANINVVGVQSGQWEIEKGNTVAAGMLREHPDLVALLAGNDSMALGAVAAVRAAGKAGKV 249 Query: 245 LVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 VVG D I + M+ G++ AT Q A G+++ + A Sbjct: 250 QVVGYDNINAIKPMLADGRVLATADQYAAKQAVFGIEMALKA 291 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 14/258 (5%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 ++ N F V++ +E +AK +GV ++ +E Q++ E + I P + Sbjct: 40 SMQNEFIVNVSDAMEAKAKEMGV--ELITVDAERSALKQVEQVESFIGQGVDAIIMNP-A 96 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLK-KAGGNVEAFVTTDNVAVGAKGASFIIDK 151 V P + + +D KI + N+ + AFV +D+ +I +K Sbjct: 97 EVEASSPAIK--------LAMDAKIPIINVNSETSAKPTAFVGSDDTESARIAMKYIAEK 148 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 LG +G + ++ G G A+ R NGA + K +KL+A Q +WDR K + + N + Sbjct: 149 LGGKGN-ILMMHGFMGQAAQIKRDNGAKDILKANPGLKLLAEQSGEWDRAKGMSLTENWI 207 Query: 212 QR-NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 Q I AI+ ND M MG +A+ AG GKVLVV D IP+A + V+ G + ATV Q Sbjct: 208 QSYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTLDATVFQ 267 Query: 271 NPADIGATGLKLMVDAEK 288 N + G ++ V A K Sbjct: 268 NAKEQGGKAIETAVKAAK 285 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 20/296 (6%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 S+ + A + +L PFW MK GIED+AK V + S+ + +QL +D Sbjct: 47 SSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKDNANTQLANVQD 106 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 GI +P S + + ++ A + GI +V D D G +F++TDN Sbjct: 107 AITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTD-------SGEYVSFISTDN 159 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQPA 196 K ++ DKL +G E+A I +G R+ G E K+ ++K V Q Sbjct: 160 SGGAKKLGEYVADKLN-KGDEIAQIALNQARKNGVLRKEGFEEGIKE--KLKEVDFRQME 216 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +R + + +++ PN+K I+C ++ +MG A+ K +VG D PE Sbjct: 217 KVNRDEGVRYTQDLITSYPNLKCIFCHSEDPSMGAVTALKEIN-NDKCKIVGFDCSPEVV 275 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL-VDSILVTQ 311 + +++G + AT AQ P +G T + + G PE ++ VD++LVTQ Sbjct: 276 EAIKSGDILATAAQQPVFMGRTAVDCLKTHLDGG-------TPEKEISVDTLLVTQ 324 >UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY95_ACICJ Length = 329 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 8/258 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+V ++PF++ M+ G EAK LG+ + I+ S ++Q+ + L K+ + Sbjct: 39 ALVPGIATDPFYITMQHGAAAEAKKLGLHL-IWQGGSSFSPETQIPALQALLAKHPAALL 97 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP + L+ P+ + GI ++++D I + +++ +T++NV GA A Sbjct: 98 VAPTNEKALINPIRQFIAAGIPVISVDTTISDTAI------LKSRITSNNVQGGASAARA 151 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 I G+VA+I K G ++ +AR+ G K +K+VA + D KA A Sbjct: 152 IAG-FAHGKGDVAVINVKPGISTTDARQKGFLAQMKHYKGMKVVAIEYDDDSPTKAFTEA 210 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 +L + P++K I+ N GV +AV AGK GKV VVG D P K+++ G ++ Sbjct: 211 QLLLLKYPHLKGIFATNVFSGEGVGKAVVAAGKKGKVDVVGYDAEPGEVKLLKQGVISTL 270 Query: 268 VAQNPADIGATGLKLMVD 285 + Q PA+ G G+K D Sbjct: 271 IVQRPAEEGRLGVKYAYD 288 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 20 SAFAAAEYAVV---LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 S FA A+ + L T +PF+V +K+ +E A GV ++ S + D Q+ E Sbjct: 21 SQFALADDITIGASLLTQQHPFYVQLKQAMEKAADDNGV--ELIVSIANQDLNKQISDVE 78 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 D + I +P+ S +V + +A + GI ++ +D + G V+A V TD Sbjct: 79 DFIVRGVDAIVLSPVDSKGVVGAIIKAKRAGIPVITVD-------ISAEGVEVDAHVATD 131 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N G + A + K+ G+VAII+ S R G EA K I++VA QP Sbjct: 132 NY-YGGRIAGETMAKVLNGKGQVAIIDYPVVQ-SVRDRVAGFKEAVSKYPGIEIVAIQPG 189 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 R +AL+ A N+LQ +P + I+ D A+ AV +AG V V+G DG+ EAR Sbjct: 190 -ITRPEALNTAQNILQAHPEVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEAR 248 Query: 257 KMVEAGQ-MTATVAQNPADIGATGLKL---MVDAEKSGKVIPL 295 V+ + A V Q P ++G GL+ ++ EK K IP+ Sbjct: 249 NAVKKEESFVAVVCQYPGEMGRLGLETALRVIKGEKVEKEIPV 291 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 23/301 (7%) Query: 3 KYLKYFSGTLVGLMLSTSAFAA--------AEYAVVLKTLSN--PFWVDMKKGIEDEAKT 52 + + Y TL + LST AF+A A +++ LS P +V +++ +E EAKT Sbjct: 2 RKVTYLMTTL-AIALSTFAFSANAAPKGKDAPVTILVSALSYSFPHFVFLQEQLEAEAKT 60 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 LG +V I S + Q+ E + GI AP + L + A K+GI +V Sbjct: 61 LG-NVKIIRSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVT 119 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 +D ++ V A V DN+ +GA+ ++KL +G + ++G G+ + Sbjct: 120 IDRPVN------GVPEVIANVAADNL-IGAQRQGEAVEKLFPQGATIINLQGIPGDKTAN 172 Query: 173 ARRNGATEAFKKASQI-KLVASQPADWDRIKALDVATNVLQ--RNPNIKAIYCANDTMAM 229 R G + K ++ K VA Q A ++R + L V N+L NP I ND A+ Sbjct: 173 DRSKGVHDTLDKHPELYKFVAEQTARFNRDQGLSVTENLLTGLANPP-TVIVAGNDDSAL 231 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G AQAV G GK+ + G DG +A K V G +T TV Q P G +K++ D ++ Sbjct: 232 GAAQAVEARGLKGKIAIFGYDGSTDALKAVRDGVLTGTVDQYPGKQGREAVKILTDYIRT 291 Query: 290 G 290 G Sbjct: 292 G 292 >UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-binding protein n=9 Tax=Actinomycetales RepID=B5GEU2_9ACTO Length = 367 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 11/241 (4%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 +NPF + ++DEA+ GV + A ++ F Q+ +DL K + APL+S Sbjct: 92 ANPFRIAETASLKDEARKRGVK--LLAVNAQSQFSKQISDVQDLIAKGADLLVIAPLNSD 149 Query: 95 NLVMPVARAWK-KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 PV RA K I +V +D KI+ K + +F+ +D V G + A +I+ G Sbjct: 150 GW-EPVLRAASAKKIPIVTIDRKINAGPCK----DYVSFIGSDFVEQGRRAADKMIEATG 204 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKALDVATNVLQ 212 +G EVAI+ G AGN R G + +KA +K+V Q D+ R K V ++Q Sbjct: 205 GKG-EVAILLGAAGNNVTTERTKGFKDRVAEKAPGLKVVFEQTGDFAREKGQSVTEQLIQ 263 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQN 271 P IK IY ND M +G A+ +AGK G V +V DG A K + G ++ + N Sbjct: 264 SKPGIKGIYAENDEMGLGAVNALKSAGKKPGAVKIVTVDGTRNAVKQIVDGWISGVIESN 323 Query: 272 P 272 P Sbjct: 324 P 324 >UniRef50_Q21X74 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Bacteria RepID=Q21X74_RHOFD Length = 346 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 22/276 (7%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ KT +NPF+V MK+G + EAK G + +GD SQ+ E+++ K I Sbjct: 47 LITKTETNPFFVKMKEGAQAEAKKAGAKLMTATGKKDGDTASQITALENMAAAGAKTILI 106 Query: 89 APLSSVNLVMP-VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 S+ + ++P V + KG+ ++ LD D +A TDN G + Sbjct: 107 T--STGDAIIPTVKKVQAKGVQVIALDSPFD---------GADALFATDNYKAGVLIGQY 155 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF----------KKASQIKLVASQPAD 197 LG + ++A+++ G+ G R NG F + +S + V + D Sbjct: 156 AKAALGDKPAKIAMLDLFPGHPVGAQRHNGFMSGFGLKANDAKSNELSSTAETVCAGDTD 215 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 ++ K N LQ+NP+I +Y N+ A G A+ AGK V++V DG + K Sbjct: 216 GNQAKGQTAMENCLQKNPDINVVYTINEPAAAGAYNALKKAGKEKGVIIVSVDGGCQGVK 275 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 AG++ AT Q P + + G+ V+ K+GK + Sbjct: 276 DTAAGKIAATSQQYPLKMASMGVAAGVEYAKTGKKV 311 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 11/237 (4%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 T+++P+ V M +G + A VD+ + D Q+ E L + K + +PL+ Sbjct: 41 TMNHPWRVAMVEGNKKYAAEHYPDVDLIVTDGNNDASKQVADVESLIAQGIKVLMISPLT 100 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 L V A GI +V LD K++ GG +N+ +G F+ KL Sbjct: 101 EQALTPVVKEAMDAGIKVVTLDRKVNTPVTVHVGG--------ENLPLGVGAGEFLAKKL 152 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 +G + + +G AG ++ R G EA K +K+VASQ D+ R KA+ +++Q Sbjct: 153 NGKGNIIEL-QGTAGASATIDRNKGFAEAIAKHPDMKVVASQNCDYTRDKAVKFMEDMVQ 211 Query: 213 R-NP-NIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 R P I+A+Y ND MA+G Q + AG+ +V VVG DG A + V+ G++ AT Sbjct: 212 RFGPGQIQAVYAHNDEMALGAIQVLEAAGRLNEVAVVGIDGQETAFEAVKQGKLAAT 268 >UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZM3_ACICJ Length = 339 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 86/281 (30%), Positives = 132/281 (46%), Gaps = 13/281 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSN--PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 L A A Y L T SN P+W+ +++G + AK GVSV A S D Q+ + Sbjct: 34 LPVPAKPAKHYHFTLITKSNASPYWLAVREGADAAAKKFGVSVAFEAPASGTDLAGQIGM 93 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + GI A + L+ PV A I +V +D + N+ + F+ Sbjct: 94 VNNAVTGGTDGIILAAQNPQALLKPVKSALAHHIPVVTVDSGLS-PNIS------DCFLA 146 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS- 193 T NV A A + D L G+ AI++ ++G AR G K IK + Sbjct: 147 TSNVGAAAALAKYTADHLMGGKGQYAIVDFNHTASTGIARPKGFMLGMKSYPHIKKMGPI 206 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 Q ++ D L +AT +L + P++K I+ AND A+G A+AV A KV VVG D Sbjct: 207 QYSNNDVSAGLRIATTMLTQYPHLKVIFGANDRAALGPAEAVQRA--HAKVKVVGFDADL 264 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 +V+AG + A++ Q+P D+G + ++D + GK +P Sbjct: 265 GEIALVKAGIIQASILQSPYDMGYYAVVALLD-KLDGKTLP 304 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 6/258 (2%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP-SEGDFQSQLQLFEDLSNKNYKGI 86 AV++KT ++ +W +++KG D + F P SE Q+ + D + I Sbjct: 50 AVIVKTANSNYWQNVRKGAADAVAKVENYTMTFQGPTSESAVADQVNMVADAVTQKVAAI 109 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 AP LV + +AW+ I +V +D I K ++F+ TDN A G Sbjct: 110 VLAPSDPDALVPSIRKAWEAHIPVVLIDSMISDSGAKY----YQSFLATDNEAAGEALGK 165 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 ++D +G + G+VAI+ G S R G + + S I++V + A++ Sbjct: 166 EMVDHVG-QTGKVAIMSYVPGVGSEIGRVGGFRKYIAEHSHIQIVGPFYSQSQMALAMNQ 224 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 T+VL NP++K I+ AN+ A+GV +A+ AGK+GK+ + DG + + V +G Sbjct: 225 TTDVLASNPDLKGIFAANEMTAVGVGRAIQQAGKSGKLYAIAFDGNEDEQGFVRSGTFQL 284 Query: 267 TVAQNPADIGATGLKLMV 284 Q +GA G++ + Sbjct: 285 LAVQGSYAMGAKGVETAI 302 >UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Alphaproteobacteria RepID=A9HN30_GLUDA Length = 335 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 70 SQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNV 129 +Q+ E+ + + + + L V+ + KGI ++ LD + G Sbjct: 94 TQVSQVENFLTQQVDILFVSAFEAAPLTPAVSAVYDKGIPVIELDRR-------TTGEKF 146 Query: 130 EAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIK 189 +FV+ DN A+ A A L +GG+VAI+EG ++ R G ++K Sbjct: 147 TSFVSGDNRAI-AHEAGLYAASLLPDGGDVAILEGLPSSSPAIERLEGFKAGISTNPKVK 205 Query: 190 LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGT 249 ++A QP DW + KA++V + +LQ +P+IK +Y +ND A G AV AGK G+V ++GT Sbjct: 206 IIAVQPVDWMQDKAVEVFSAMLQAHPDIKLVYTSNDLAAAGAYIAVKQAGKLGQVKIIGT 265 Query: 250 DGIPEAR---KMVEAGQMTAT 267 DG+P + V GQ TAT Sbjct: 266 DGLPGPSGGIRAVAEGQWTAT 286 >UniRef50_Q67RD5 Ribose ABC transporter ATP-binding protein n=7 Tax=Bacteria RepID=Q67RD5_SYMTH Length = 429 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 4/142 (2%) Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 GE+ I G G A R G EA I +VASQPAD+DR K L V N+LQ +P+ Sbjct: 282 GEILGIAGLMG-AGRTHRGQGFHEAVDGVQGIDVVASQPADFDRAKGLTVMENILQAHPD 340 Query: 217 IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIG 276 I A++ ND MA+G +A+ AGK ++ VVG D +A K V+ G+M ATVAQ P ++G Sbjct: 341 IVAVFAHNDEMALGALEAIEAAGKADQIKVVGFDATDDAVKAVQEGRMAATVAQKPKEMG 400 Query: 277 ATGLKL---MVDAEKSGKVIPL 295 G++ ++ EK + IP+ Sbjct: 401 RLGVETALKHLNGEKVDEYIPV 422 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 123/245 (50%), Gaps = 15/245 (6%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 T++NPF+ +++ IE+ G ++ ++ D Q Q+ + EDL + + P+ Sbjct: 76 TMNNPFFHAIQEAIEEVVDENGD--ELIVIDAQNDAQKQISMVEDLLTQGIDLLFLCPID 133 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKI-DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDK 151 S ++ + + K G+ +VN D + D+D V + +DN G A ++ K Sbjct: 134 SASIKSSLEQCGKAGVPVVNFDTDVYDVDL-------VNTIIVSDNYYAGELVAEDMMKK 186 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 L EG +V I+ + A + R+NG + K K+V+ D +L +A +VL Sbjct: 187 L-PEGSKVCILTSPSAEACIK-RQNGFKD--KADGYFKIVSEIDGKGDTATSLGIAEDVL 242 Query: 212 QRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQN 271 Q NP++ A Y ND A+G QA+ + KT VLV G DG P ++ + G M AT AQ+ Sbjct: 243 QGNPDLGAFYAINDPSAIGCVQALESQKKT-DVLVYGVDGQPMGKQAISEGTMEATAAQS 301 Query: 272 PADIG 276 P +IG Sbjct: 302 PINIG 306 >UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUK5_9CLOT Length = 336 Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 11/275 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + ++K++ F + M G E A + +++ + + Q+QL E Sbjct: 58 FVFIVKSMQFSFMLSMIDGAEAAAALVPNINIKCIGPETPYSVEEQIQLVEQAITDGADA 117 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I P S +V + +A GI I N K GG+V ++ DN VG + Sbjct: 118 ILITPADSTGIVPAIEKANAAGI-------PIATPNTKAYGGDVLTWIGVDNYTVGYELG 170 Query: 146 SFIIDKLGAEG-GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 + + + L EG G+V +IEG AGN++ R +G +AFK I+L+ SQPAD++R K + Sbjct: 171 TALCEAL--EGTGKVVLIEGTAGNSTSTERVDGYLDAFKNYPGIELLDSQPADFNREKGM 228 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 V N LQR P I + N M MG +A G+ +++ V D + ++AG + Sbjct: 229 TVMENFLQRYPEIDGVGSINKDMTMGAIEACKAVGRDKEMVQVTFDVDNDCLDAIDAGDI 288 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 T AQ A + + A KV P P Sbjct: 289 LITGAQEEKSQIANAIYACLLACNGYKVAPEQYIP 323 >UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional regulator n=24 Tax=Bacteria RepID=C5CZB4_VARPS Length = 315 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 13/276 (4%) Query: 22 FAAAEYAV----VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 FA A+ + V K + FW +K G E AK L V V +E Q+ + Sbjct: 21 FAQAQQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKVKVTFEGPETEAMVDKQIDMLAA 80 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 K + I FA L S + + +A I +V D +D D TTDN Sbjct: 81 ALAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGVDSDIPVTT-------TTTDN 133 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPA 196 A A A + + +G + GEVA++ + +G RR+G K A IK+V+ Q Sbjct: 134 KAAAALAADKMAEMIG-KSGEVALVVHDQTSRTGVDRRDGFVNRIKSAYPNIKIVSVQYG 192 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 D++K+ ++ ++LQ +PN+K I+ AN+ A+GV V ++GKV+++G D + + Sbjct: 193 GGDQLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKVVIIGYDSGKQQK 252 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + G M + QNP +G +++ V A K K+ Sbjct: 253 NAIMDGSMAGAITQNPVGMGYKTVEMAVKAIKGEKL 288 >UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KYA7_9FIRM Length = 281 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 9/250 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA-SPSEGDFQSQLQLFEDLSNKNYKGI 86 A+ + ++N F + ++ EA+ LG + D F + D +Q+ E GI Sbjct: 2 ALFMSHMTNEFVKTLSSSVQKEAEELGYTGDSFKIYDGKNDVATQVSQIEQAVTLGVDGI 61 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+S+ +V V A K G+ +V L+++I N + FV DN + GA Sbjct: 62 IIEPVSTDGIVKAVKDAEKVGVKVVILNQRISDQNA------ADTFVGADNESTGAALMK 115 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +++ L +G V ++ G G+ R G + +K++AS ADWD KAL + Sbjct: 116 KVMEDLDGKGNIVELL-GPMGSDGQVGRSKGFDSVLAEYPDVKVIASDSADWDTAKALTL 174 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N L + +I+A+ ND MA+G AQA+ AG T K+ V G D + + G MT Sbjct: 175 TENWL-TSSDIQAVVAQNDGMAVGAAQAIKEAGLTDKIKVYGVDATSDGLNAIVNGGMTG 233 Query: 267 TVAQNPADIG 276 TV+Q + G Sbjct: 234 TVSQGTENQG 243 >UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Bacteria RepID=C6D2L0_PAESJ Length = 333 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 11/266 (4%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ K + FW +K G E A V + +E Q+++ + +K I F Sbjct: 50 IISKGFQHQFWQAVKAGAEKAATEFNVEITFEGPETEAQVDKQIEMLQAALDKKPSAIGF 109 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMD-NLKKAGGNVEAFVTTDNVAVGAKGASF 147 A L S V + +A GI ++ D +D D + A +T+NVA A A Sbjct: 110 AALDSQASVPLLQKAKAAGIPVIAFDSGVDSDIPITTA--------STNNVAAAALAADK 161 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDV 206 + + +G EG E+ +I + +G RR+G K K IK+V Q D +K+ D+ Sbjct: 162 MAELIGGEG-EIGVIVHDQTSVTGVDRRDGFVNRIKEKYPNIKIVDIQYGGGDHLKSTDL 220 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 A ++Q +PNIK + +N+ A+GV AV K G++ V+G D +++G M Sbjct: 221 AKAMIQAHPNIKGFFGSNEGSAVGVINAVTELKKEGQITVIGFDSGKAQIDAIKSGVMAG 280 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKV 292 + QNP IG +K V+A + KV Sbjct: 281 AITQNPVGIGYETVKAAVEAIRGEKV 306 >UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacteria RepID=A1WLB7_VEREI Length = 328 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/266 (32%), Positives = 135/266 (50%), Gaps = 16/266 (6%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 TL +PF+V +K+G E AK G + IF + GD Q +DL + + P++ Sbjct: 42 TLQSPFYVQLKEGAEAAAKAGGDEL-IFLD-ANGDVNKQNNDIQDLLTRKVDVLIINPVN 99 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 + +A A K G+ ++ +D I+ GG V A + DNV +G ++ +L Sbjct: 100 PDAVKPAIAAAQKNGVPVITVDRSIN-------GGGVTAHLGRDNVKMGKAVGDAVLAEL 152 Query: 153 GAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATN 209 +G G+V I+G AG ARR+G +A K S K+VA A++ R A+ + Sbjct: 153 KKKGTTRGKVIEIQGDAGGTVMAARRDGFHDALK-GSGFKIVAGPYAEYTRANAVTAMQD 211 Query: 210 VLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG-QMTATV 268 +LQ +P++K +Y ND MAMG + +A AGK V V G DG+ EA + G Q AT Sbjct: 212 LLQAHPDVKVVYAHNDDMAMGALKVLAEAGKK-DVFVAGVDGLSEALASMAGGDQYVATA 270 Query: 269 AQNPADIGATGLKLMVDAEKSGKVIP 294 +P +G ++ A K+GK +P Sbjct: 271 LNDPRYLGDMTVQ-TARAIKAGKKVP 295 >UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A6VWF2_MARMS Length = 322 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 26/313 (8%) Query: 12 LVGLMLSTSAFAAAEYAVVLKT-LSNP----------FWVDMKKGIEDEAKTLGVSVDIF 60 L+ + AF YA K +S P W K + +AK + + Sbjct: 10 LIAVFTMLFAFVGTSYAAKYKIGISVPSADHGWTAGLLWWANKAAADLKAKEKDIEFFVV 69 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 AS S Q+ EDL K + P + L + A+ +GIY V +D + Sbjct: 70 ASSSG---SKQVGDVEDLMIKGIDALVILPHNPATLQKVIEEAYDEGIYTVVVDRE---- 122 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 L NV F+ DN +G GA ++ ++ +G V +IEG + + R + + Sbjct: 123 -LAHPAQNV--FIAGDNAGLGRVGAQWLAKEMSGKG-NVVVIEGLQIPINKQ-RVDAFND 177 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 IK++ SQP DW KAL V N LQ++P I A++C +D M GV +A+ +G+ Sbjct: 178 VIAGYPNIKILDSQPGDWSTQKALSVMENFLQKHPKIDAVWCQDDDMLKGVLKAIEESGR 237 Query: 241 TGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 T V+G G + +M+++G + ATV +P+ I A+G+ L V K K+ L Sbjct: 238 TDIKTVLGGAGSKDIIEMIQSGNKMVRATVTYSPSMI-ASGIALAVHGVKHEKLGYLYHE 296 Query: 299 PEFKLVDSILVTQ 311 P ++ + LVT+ Sbjct: 297 PSRVILGADLVTK 309 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 8/264 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+++ + F+ M+ G A+ LG +++ P E +Q + + N I Sbjct: 50 ALIVGVTGDEFYTTMECGARAAARKLGARLNV-QGPEEFSPAAQTPILNAVVQSNPDAIL 108 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP +V P+ A + I +V +D I+ + + A +++DNV G Sbjct: 109 IAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEIALA------RISSDNVEGGRMAGEA 162 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + +++G +G +V +I K G ++ + R+ G EA K+ I+ + ++ + D +A + Sbjct: 163 LAEQIGGKG-KVLLISVKPGISTTDQRKQGFEEAIKQYPDIEYLGTEYCNDDPTQAASIT 221 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 T+ LQ +P++ I+ AN G V AGK +V VV D P + + G + Sbjct: 222 TSTLQAHPDLAGIFGANVFSGQGAGTGVRQAGKRDQVSVVAFDASPTQVEDLRRGNLDVL 281 Query: 268 VAQNPADIGATGLKLMVDAEKSGK 291 +AQ+P DIG G+++ V +SG+ Sbjct: 282 IAQHPNDIGRRGVQIAVRYLESGE 305 >UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZZ1_MARMS Length = 294 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 19/287 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVV---LKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 K LK F+ V L ++ A + VV L T S+PF++ + G+++ AK +++ + Sbjct: 2 KNLKRFTAIAVALASASFNLYAKDEPVVCASLLTQSHPFYIALGNGLKEGAKLQHINLKV 61 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 S + D Q+ ED KN I +P+ S + P+ +A + I ++ +D I Sbjct: 62 --SVANQDLAKQINDIEDCITKNVDAIVISPVDSKGIRGPLKKAERANIPVITVD--IGA 117 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 +N K + + + TDN G + +LG +G V + G +S EAR G Sbjct: 118 ENSK-----IVSHIATDNYGGGVVAGKLAVKQLGGKGQVVML--SYPGISSVEARLQGFR 170 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 +A + IK+VA QP R +++ N+LQ NP+ I+ D M +G AV Sbjct: 171 DAVAD-TDIKIVAVQPGKT-REESMTSTINMLQANPDTDLIFAFGDDMMIGAGLAVTK-- 226 Query: 240 KTGKVLVVGTDGIPEARKMV-EAGQMTATVAQNPADIGATGLKLMVD 285 + K +V+G DG+PE K V E + V Q+ +G T +K++ D Sbjct: 227 QKSKAVVIGFDGMPEGIKAVDENDHIIGVVKQDADAMGKTAMKVVAD 273 >UniRef50_Q2RKM1 ABC transporter substrate-binding protein n=3 Tax=Bacteria RepID=Q2RKM1_MOOTA Length = 358 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 17/272 (6%) Query: 43 KKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAR 102 K +E K LGV + + D Q ED++ K++ +A PL L PV + Sbjct: 67 KDTVERWGKWLGVDITWYDGALSVD--KQRAAVEDMATKDWDFVAIQPLGIGTLNEPVKK 124 Query: 103 AWKKGIYLVNLDEKIDMDNLKKAGGN--VEAFVTTDNVAVGAKGASFIIDKLGAEGGEVA 160 ++GI + IDMD + G + F+ DNV + ++ +G +G V Sbjct: 125 MLERGIPV------IDMDTMIAQPGELPITCFIAPDNVWGAEQVTEALMQAIGGKG-NVV 177 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 + +G G+ + R G K+ +K++ PAD+D K + N+L R I A Sbjct: 178 MTQGSLGHTGAQGRAQGFHNVIKRYPDVKVIDETPADFDVNKVAQIWENLLNRYDKIDAA 237 Query: 221 YCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADI--GAT 278 Y ND MA+ Q + NAG+ ++ + G DG+ A + V+ G M AT + I GA Sbjct: 238 YFHNDDMALAAYQVIKNAGREKEIKIGGNDGMQPAVEAVQKGIMVATARNSAPRIHWGAL 297 Query: 279 GLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + EK K P F L D ++T Sbjct: 298 MIGYYAATEKDAN----KKIPPFILADGPIIT 325 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 9/263 (3%) Query: 42 MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVA 101 ++ G+++ KT V++ + D QL E+ + I P+ +V+ V Sbjct: 74 LQDGMKEYEKTQK-DVEVIYVDAMNDASKQLSQVENFIQQKVDAIVLIPVDTVSAPEMVD 132 Query: 102 RAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAI 161 +A + I +V ++ D + KA A+V ++++ G + L +G ++AI Sbjct: 133 KANQANIPIVVVNRIFD--GVDKA----TAYVGSESIKAGIMQMEEVAKLLNGKG-KIAI 185 Query: 162 IEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIY 221 + G+ G+ + R G + KK +K+V A+WDR K + + N LQ I A+ Sbjct: 186 MNGQMGHEAQIKRTEGNKQVIKKYPDMKVVLEGTAEWDRAKGMSLMENWLQSGKKIDAVV 245 Query: 222 CANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 C ND MA+G A+ + GK V+V G D P+A + V+ G++ TV QN G GL+ Sbjct: 246 CNNDEMAIGAIMALEDEGKLDDVIVAGVDATPDALEYVKEGKLKVTVFQNAKGQGQLGLE 305 Query: 282 LMVDAEKSGKVIPLDKAPEFKLV 304 + + A K KV + P ++LV Sbjct: 306 VAIKAAKGEKVEKFNWIP-YELV 327 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 12/261 (4%) Query: 13 VGLMLSTSAFAAAE---YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQ 69 VG+ L S +A + ++++ SNP+W K E+ A+ LG D+ S +GD Sbjct: 15 VGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEADV--SSHKGDTN 72 Query: 70 SQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNV 129 ++ + + + I P ++ + V +A + GI + ++ +I+ L Sbjct: 73 TESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEINQQGL------A 126 Query: 130 EAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIK 189 EA + ++N A GA I +G + ++G + + R NG + ++ Sbjct: 127 EAQLVSNNAQGAALGAQQWIKSVG-DSARYVELKGAPSDNNAATRSNGYETVLSQYPGLE 185 Query: 190 LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGT 249 V S A+WDR + + ++LQ NP+I + ND MA+G A+ AGK V+V G Sbjct: 186 KVGSDVANWDRTQGFNKTQSMLQANPDIDGVISGNDEMALGAISALKEAGKLDDVVVGGF 245 Query: 250 DGIPEARKMVEAGQMTATVAQ 270 DG P+A + V+AG+M TV Q Sbjct: 246 DGSPDAVEAVKAGEMDYTVLQ 266 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 17/252 (6%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+V+ TL+NP++V + + + A+ LG IF S+ D + F+ + Y I Sbjct: 37 AIVISTLNNPWFVVLAETAKQRAEQLGYEATIF--DSQNDTAKESAHFDAIIAAGYDAII 94 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN----VAVGAK 143 F P + + V RA + GI + +D I+ A G A + +DN V +G Sbjct: 95 FNPTDADGSIANVKRAKEAGIPVFCVDRGIN------ARGLAVAQIYSDNYYGGVLMGEY 148 Query: 144 GASFIIDKLGAEGGEVAIIE--GKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 F+ +K + E+ E G R NG + + K+VA Q A++DR Sbjct: 149 FVKFLKEKY-PDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRD 207 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 A V +LQ +P IKAI+C ND MA+G +A AG+T + + G DG + ++ Sbjct: 208 TAYKVTEQILQAHPEIKAIWCGNDAMALGAMKACEAAGRT-DIYIFGFDGAEDVINAIKE 266 Query: 262 G-QMTATVAQNP 272 G Q+ AT+ Q P Sbjct: 267 GKQIVATIMQFP 278 >UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L479_THERP Length = 357 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 20/276 (7%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 L +PF+ D +KG E +AK LGV+ + + +P + D Q+++ EDL K I+ +P Sbjct: 84 LVHPFFEDCRKGGEQKAKELGVTFE-YVAPQQADPALQVKIIEDLIRKKVHAISISPNEP 142 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 ++ +A K+GI ++ D D N ++ ++ TDN A G K + KL Sbjct: 143 KSVEPVIAEGMKQGILMMTFDA--DSPNSQRV-----MYIGTDNKAAG-KTMGETMAKLL 194 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR 213 G+V II G G + R G E I++V Q D D K L V+ +L+ Sbjct: 195 NGRGKVGIITGGLGALNLNQRIEGFKEGV--GPNIQVVDVQATDDDLQKGLSVSEAMLRA 252 Query: 214 NPNIKAIYCANDTMAMGVAQAVANA---GKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 +P++ I C + T +AQ + + + GK+++V D + E ++ ++ G + AT+ Q Sbjct: 253 HPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAIQEGIIAATMVQ 312 Query: 271 NPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 P +G ++ D +GK P FK +D+ Sbjct: 313 RPVQMGVLTVQWAYDI-LTGKA-----KPPFKNIDT 342 >UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW07_CLOB8 Length = 326 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 9/251 (3%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 +NP+W+D+K G E AK G V+ F P+ + L+LF+ ++ GI Sbjct: 49 TNPYWLDIKAGAERAAKERGAVVE-FLGPTTASTEDGLKLFDMATSAKVSGIITYVQEEG 107 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 + A +KGI +V +D + N A+V TDNV G ++ ++G Sbjct: 108 QYKKKINSAMEKGIPVVTIDSD-------EEDSNRIAYVGTDNVLAGQVAGKEMVKQIGT 160 Query: 155 EGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRN 214 G VAI+ G + + R G T+ K S +K+V + +D ++A + +L RN Sbjct: 161 -SGNVAIVMGGKNVKNQKERVEGFTQYIKSNSNLKIVDTDSSDAMLLEAEIITRKILNRN 219 Query: 215 PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 NI A++C + +G A+AV + +V ++ D + + + G ++AT+ Q + Sbjct: 220 DNINALFCTSALDGIGAARAVKDLNYKDRVKIICFDDLDDTLSNIRNGLVSATIVQKSNE 279 Query: 275 IGATGLKLMVD 285 +G + +++D Sbjct: 280 MGYRAVNIIMD 290 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 7/260 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 +AV+ K ++ FW +K G E + +G + E D Q+ + + N G Sbjct: 143 HFAVIPKGTTHIFWQSVKHGAEQAGEEIGAKITFRGPSKENDRDEQINVVQGFLNARVDG 202 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I APL + LV PV A + G+ +V D ++ D G+ ++V TDN G Sbjct: 203 ILLAPLDADALVRPVKEASRAGVPVVIFDSGLNTDP-----GDFVSYVATDNFEGGKLAG 257 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS-QPADWDRIKAL 204 + + LG +GG+V ++ + G+ S R G + + S I++++S Q A A+ Sbjct: 258 EAMANALGEKGGDVILLRYEQGSESTHQREEGFLYSIAEYSNIRVLSSDQYAGTTTESAI 317 Query: 205 DVATNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D A +L R I + A G +A+ GKV +V D R+ + AG+ Sbjct: 318 DKAQALLNRFGDEADGICTVCEPTAEGALRALRERKLAGKVKLVTFDSSDSLRESLSAGE 377 Query: 264 MTATVAQNPADIGATGLKLM 283 + A V Q+P +G +K M Sbjct: 378 VNAIVLQDPVAMGYQAVKTM 397 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 14/271 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L TL NPF+ + I E K G D + D Q +D K I Sbjct: 45 VSLLTLDNPFFKVIGDNIVSEGKKRGY--DAVVVSGDKDVAKQSNQIKDFIVKKVSAIVL 102 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 +P S ++V + A GI + +D + G + + TDN G + A + Sbjct: 103 SPCDSKSIVPVIQEANAAGIPVFTVDIP-----CHEPGVKIATQIATDNYGGGKEAAKAM 157 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-----KKASQIKLVASQPADWDRIKA 203 I+ LG GG++AI+ K S + R G E + S++ +VA + + + Sbjct: 158 IEALGEAGGKIAILHFKQAE-SCQLRVKGFREIIDAHNAEGKSKVDIVAELESGGAKDQG 216 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 A + LQ NP++ I+ ND A+G A+ AGKT +V++VG DG PE ++ ++ G+ Sbjct: 217 YKAAEDTLQANPDLHGIFAINDPAALGARAALEKAGKTDQVVIVGFDGQPEGKQAIKEGK 276 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 + A Q P +GA + ++ K G+ +P Sbjct: 277 IYADPIQFPDKMGAQIVDAIIQQSK-GETLP 306 >UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X5_9BURK Length = 318 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 12/280 (4%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 GLM ++A A A + +N W + G + + GV I + +G+ QL Sbjct: 18 GLM--SAAMAETTIAYITNGNTNEGWTLINGGAKKAGQKAGVKF-IELAAEKGELSKQLA 74 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + ED+ + IA AP+ S + + +A GI +V +D I +G + ++V Sbjct: 75 IVEDMITRKVNAIAIAPVDSAGIAPAINKALAAGIKVVAVDTGI-------SGAKITSYV 127 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 TDN+ + +++ +G V + G G ++G+ R+ G + + V Sbjct: 128 ATDNIKAAMVQGDWTAEQI-KDGDTVIYVTGDQGQSTGQERKKGFLDGLNAKRKNVKVVE 186 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG-KTGKVLVVGTDGI 252 WD+ A + L+ NP K I CA D A+G A+ AG K G V + G DG Sbjct: 187 VATTWDQTMAQNGVETALRANPTAKVIACAWDGGALGAKAALMAAGKKAGDVKIAGFDGS 246 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 P M++ G +A AQ A IG G++ + A + KV Sbjct: 247 PGGLDMMKQGWQSANAAQMLAKIGQVGVETAIAAAEGKKV 286 >UniRef50_A1WGA7 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderiales RepID=A1WGA7_VEREI Length = 361 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 6/264 (2%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A ++L+NP+ KG + AK++G+ + EG + + L K + Sbjct: 48 ACSFRSLTNPYHAAFNKGAQSFAKSVGLPYVPLTT--EGSSEKGIADIRALLQKTGGNLV 105 Query: 88 FA--PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 P S + + V K G ++ + K + + + A ++ D +A GA A Sbjct: 106 LNVDPNDSADARVIVETCAKAGAHVTTIWNKPNDFHPWDFNPHYVAHLSFDGLAYGAATA 165 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + + +G +GG VA+ G N R+ G A KK I+L+ Q ADWD KA Sbjct: 166 TELFKAMGGQGGVVAL-GGIFSNVPAIERKAGLMAALKKFPDIQLLDFQVADWDSQKAFP 224 Query: 206 VATNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + L R N +K ++ AND MA+G +A+ G G++LV G DG ++AG++ Sbjct: 225 IMQAWLTRFNTKVKGVWAANDDMALGAIEALRAEGLAGQLLVSGMDGTQPGLAALKAGEL 284 Query: 265 TATVAQNPADIGATGLKLMVDAEK 288 ATV +P +G GL + + A++ Sbjct: 285 VATVDWDPYWLGGVGLSMGLSAQQ 308 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 19/253 (7%) Query: 25 AEYAVVLKTLSN---PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 AE +V+++T N F ++ K E+E K + I S+ D +Q+ E+ Sbjct: 67 AEVSVIIETFDNTFASFVMNAMKKYEEEHKD---KIHITYLDSKQDANTQISQVENQILN 123 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKK-GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + I + + P+ RA K+ G+ L+ + + N ++FV D Sbjct: 124 GTQAIICLAVDA-KQSEPIVRACKEAGVPLIAFNRIFE---------NCDSFVGADGAVA 173 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWD 199 G+ A F +K G +G VAI+ G G + RR+ E + +++V DW Sbjct: 174 GSLLARFTGEKTGGKG-NVAIVNGIMGQENQFIRRDAIVETLGEMYPDMQVVIEGAGDWK 232 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R KAL + LQ +I AI C ND MAMG AV AGK+ ++V G +G P+ V Sbjct: 233 RDKALQLVETWLQSGTDIDAILCLNDDMAMGTQLAVEQAGKSDDIIVCGVNGDPDGINAV 292 Query: 260 EAGQMTATVAQNP 272 G++ ATV QNP Sbjct: 293 RDGKIAATVFQNP 305 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 10/270 (3%) Query: 15 LMLSTSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 L+L +S +AAA Y V + + + F ++ G+E+ A+ V + ++GD Q+ Sbjct: 11 LLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQF--EDAQGDVVRQI 68 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 + ++ + P+ + A + + LV ++ D L K V Sbjct: 69 NQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKGVTTV--- 125 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 ++++ G ++ +K+G +G +A+I G S R G + K I +V Sbjct: 126 -ASNDIEAGQLQMRYLAEKMGGKG-TIALIMGDLAQNSTHDRSEGVKQVLKDYPGITIVE 183 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDG 251 Q A+W R K +D+ +N L AI ND MA+G A A+ AGK G+V +VG DG Sbjct: 184 QQTAEWQRNKGMDLTSNWLLAGRTFDAIVANNDEMAIGAAMALQQAGKAKGEVAIVGIDG 243 Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLK 281 +P+ ++ G + A+V Q+P T L+ Sbjct: 244 LPDGLAAIKRGMLAASVFQDPKAQATTALQ 273 >UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Firmicutes RepID=C8WV69_ALIAD Length = 349 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 19/248 (7%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 +W G++ AK LGV +F + D ++ + + K+ GI +++ + Sbjct: 69 YWKGCFAGMQAAAKDLGVKA-VFTGAPQYDINQEVTTMQQVIAKHPAGILVTSINAQAMT 127 Query: 98 MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 + +A GI +++ D D K+ A++ T N+ G K A ++ LG G Sbjct: 128 PVINQAIAAGIPVISFDS--DAPQSKR-----YAYLGTSNIEAGQKAADYLGQALGGHG- 179 Query: 158 EVAIIEGKAGNASGEARRNGATEAFK-----KASQIKLVASQPADWDRIKALDVATNVLQ 212 EVA+I GE + + FK K +K+VA Q + D+IK V + +LQ Sbjct: 180 EVAVI-----TTPGELNLDQRVQGFKDEMAAKYPGVKVVAVQNGNSDQIKTAQVTSALLQ 234 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 PN+ I+C G A AV AGKTG V +V D +++GQ+TATVAQ Sbjct: 235 TYPNLAGIFCTEADEGTGAATAVQEAGKTGTVKIVSFDTDKATLNAIKSGQITATVAQGT 294 Query: 273 ADIGATGL 280 ++G GL Sbjct: 295 WNMGFWGL 302 >UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Proteobacteria RepID=A1WJM2_VEREI Length = 330 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 131/278 (47%), Gaps = 20/278 (7%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 T AF + V +KTLS P++ + + K LG ++ A+ ++G Q Q+ EDL Sbjct: 33 TGAF---KIGVSMKTLSAPYFAAQMEAAKARGKELGY--EVLATDAQGKLQKQISDVEDL 87 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + K + P S LV V A G+ +V +D ++ N V + N Sbjct: 88 VTRGVKLLIINPADSEGLVNAVNNASANGVKVVVIDSTLN------PRANFVTQVQSSNS 141 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR----NGATEA----FKKASQIKL 190 GA ++I+++G + ++A++ G+ GN G+ RR +G EA F KA + + Sbjct: 142 INGALVGHWVIEEVGNKSLKIALLSGEKGNPVGQERRLGVLSGIIEAQLRKFGKAD-LTV 200 Query: 191 VASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTD 250 V W+ L ++L N +I + ND+M +G +A+ +AG+TG +LV D Sbjct: 201 VGQGWGHWNDEGGLKAMEDLLVANKDINMVLGENDSMVLGARRAIESAGRTGILLVAAAD 260 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 EA +++ G+ T +PA + T + L V K Sbjct: 261 AQKEALALIKQGKYGVTGLNDPALVARTAIDLGVKVVK 298 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 23/290 (7%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 AV+L + S F V + +G++D+AK LGV V + ++GD +Q+ +D + GI Sbjct: 41 AVLLYSQSFEFMVALGQGVKDKAKELGVEVTVL--DAKGDSSTQISQIQDQLAQGVDGIV 98 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 +P +S LV V G + +D I G +A V DN G GA Sbjct: 99 LSPNNSAELVPGVQMIHDAGKTVTTVDSVI-------PGDIADAAVAFDNEKAGKLGAEA 151 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + KL E G V +G G R G + K+ IK++ + A W AL + Sbjct: 152 LA-KLMGEKGTVLEYQGAKGAYHAILRGKGFNDGIKQFPGIKVIG-RDAQWTADNALSLT 209 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAV------ANAGKTGKVLVVGTDGIPEARKMVEA 261 + + +I ++ ND M G+ + A G + +VG DG P A + Sbjct: 210 VDNFTADSSINGLFSHNDEMVRGIVSGLSQINKDAPVGAANHIPLVGVDGTPLALDRIRN 269 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 G AT+ QNP ++GA L+ VD +V P+ +L D+ L+T+ Sbjct: 270 GVQDATMDQNPFEMGALALQAQVDLLDGKQV------PKMQLTDTKLITK 313 >UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Pasteurellaceae RepID=B0URJ4_HAES2 Length = 311 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 10/294 (3%) Query: 14 GLMLSTSAFAAAEYAV--VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQ 71 GL+L++ A A Y + + + ++ + ++ + D + V I + S D Q Sbjct: 12 GLLLTSQAVIAKNYVIGAPMNSFADKWQTYLQDAVRDFDEKHD-DVQIKLADSNSDPNIQ 70 Query: 72 LQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA 131 + L ++ ++N + P + A K GI L+ ++ K + ++++ V + Sbjct: 71 VNLVQNFIDQNVDALLVVPTDPTVVKRIGVLAKKAGIPLIVVNRKPNDEHMQY----VTS 126 Query: 132 FVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLV 191 FV +D + G +FI++ L + E I+ G G + R G E F + IK+V Sbjct: 127 FVGSDEIEGGRIQGNFIVNTLAGKNAESLILLGPLGQDAVTKRTQGNEEIFAQHKNIKVV 186 Query: 192 ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG-KTGKVLVVGTD 250 + Q W+R + L +A NVL N I I ND MA+G A G K + +VG D Sbjct: 187 SKQEGRWERDRGLAIAENVLAGNKGINVIVSNNDEMAIGAILATRKLGIKDEDITIVGLD 246 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 P+A + + G + ATV Q+ G TG ++ A K KV + P F+LV Sbjct: 247 ATPDALEYLGKG-LDATVFQSAQGQGYTGAEMAYLAAKGEKVPSVKWVP-FELV 298 >UniRef50_B5K960 ABC transporter, periplasmic sugar binding protein n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K960_9RHOB Length = 254 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 17/242 (7%) Query: 43 KKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAR 102 K+G+E E I+ P + D Q + E + GIA A L V V + Sbjct: 3 KRGVEIEM--------IWDQPPQADVADQNRRIETNIGRQPDGIAVACLDRVTNVQLMNE 54 Query: 103 AWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAII 162 A K G++++N + D D G +V G ++ ++LG EG +AI+ Sbjct: 55 AVKAGVHVINFNSFCD-DAFPFVG-------PKSSVQDGYDLGEYLAEELGGEG-TIAIL 105 Query: 163 EGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYC 222 G + R G +A + ++++V QP + +A+ + N+LQ +P+I I+ Sbjct: 106 SGSLTASDHVERIEGFKDALSQHPEMEIVFEQPDNDILDQAITLTENMLQAHPDIDGIFG 165 Query: 223 ANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL 282 +N + +G A+AV NAGK G++++VG D +PEA V +G ++A AQ D+G + Sbjct: 166 SNASNPIGAARAVQNAGKAGEIVIVGMDDLPEAVDFVCSGVISALKAQRQWDMGYWTILY 225 Query: 283 MV 284 +V Sbjct: 226 LV 227 >UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Bacillaceae RepID=A4IT20_GEOTN Length = 337 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 11/261 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + +V + L N +W ++KG + A+ L V ++ + P + + L++ + + G Sbjct: 51 HFVLVPEELDNDYWRLVEKGAKAAARELDVDLE-YIGPRQANIDEHLRILKKAAAAKVDG 109 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG-AKG 144 I L+ V + K I ++ +D D + G ++ TDN G G Sbjct: 110 IITQGLTEAEFVPVINEIVDKNIPVLTID--TDAPTSWRVG-----YIGTDNYYAGFIAG 162 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 + + D G VAII G + R G +A K +I++VA + + R++A Sbjct: 163 RALVEDTQGMVN--VAIITGSLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITRVQAA 220 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + +L+++P + A Y + A+G+A+ V + + ++G D +PE + ++ G + Sbjct: 221 EKTYTILKKHPEVNAFYGTSALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTI 280 Query: 265 TATVAQNPADIGATGLKLMVD 285 ATV Q P ++G +K+M D Sbjct: 281 EATVVQEPYEMGYRAVKMMAD 301 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 13/266 (4%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 TL + F++D+ +GI+++AK LGV V I P + D Q ED +N G+ Sbjct: 50 TLQHQFFIDIDEGIKEKAKELGVKV-IVNDPDQ-DVAKQTSAIEDFIQQNVDGMIVLGTD 107 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 + +V V A++K + +V +D ++ +N+ G V +G +I +KL Sbjct: 108 NSAIVPAVEGAFEK-MPVVTVDAVLNTENITSYVGTVSYDAGK---KLGEYTKKYIDEKL 163 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 G + E+AI+ + R +G +A K ++ +K++ SQP +DR ++L+ N++Q Sbjct: 164 GGKS-EIAIVTDLKSQIQMQ-RIDGFKDALKGSANVKILNSQPG-YDREESLNTVENLIQ 220 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 NP++ IY + +G A+A + K V +VG D EA + G + A + Q P Sbjct: 221 SNPDVDIIYATAENSVLG-AKAALESAKNKDVKIVGFDLTEEASSGITDGTILAMIQQQP 279 Query: 273 ADIGATGLKLMVDA---EKSGKVIPL 295 ++G ++ +V A EK K IP+ Sbjct: 280 KEMGRLAVEAVVKAIKGEKVEKNIPV 305 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 15/258 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 V L LSNPF+V M +G E EAK + G V + S D Q E+ N I Sbjct: 64 VTLGDLSNPFFVVMAQGAEKEAKKIGGEDVRVTVVSSGYDLNQQFNQIENFVAANTDLII 123 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 S + V +A + G ++ +D I+ D ++A VTT+NV G + Sbjct: 124 INAADSKGIRPAVDQARQAGKVVIAVDTAIEAD--------IDATVTTNNVQAGEISCQY 175 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQPADWDRIKALDV 206 I D+L + G V I+ G + + R +G + K IKL++ Q A+ R L V Sbjct: 176 IADRLKGK-GNVVIVNGPPVTSVIQ-RVDGCLKVLAKYPDIKLLSKDQNAEGSRDGGLRV 233 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ--M 264 +++L P I A++ ND +GV A AN K +VG DG PEA + + +G Sbjct: 234 MSDLLVTFPKIDAVFAINDPSGVGVDLA-ANQAKRQDFFIVGVDGAPEAIEAIASGDSLY 292 Query: 265 TATVAQNPADIGATGLKL 282 AT QNP + T +++ Sbjct: 293 AATATQNPRGMTQTAIQV 310 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 23/293 (7%) Query: 12 LVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGI---EDEAKTLGVSVD-IFASP-SEG 66 L + LS +A + AV+ K ++ +W + G + E + G+ VD I+ P E Sbjct: 15 LSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKGIKVDLIWKGPLRED 74 Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 D Q+Q+ E+ + G+ APL + +V PV A + I +V D + D Sbjct: 75 DRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVIFDSALKTDKYV--- 131 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGA--EG-GEVAIIEGKAGNASGEARRNGATEAFK 183 +FV TDN KG +++G EG G V ++ G+AS E R G + K Sbjct: 132 ----SFVATDNY----KGGQLAAERMGQLLEGKGNVILLRYAVGSASTEEREAGFMDTLK 183 Query: 184 -KASQIKLVAS-QPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGK 240 K IK+++S Q A R A + N+L R + I+C + + +A+A+ + GK Sbjct: 184 SKFPNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTVAMAKALRDIGK 243 Query: 241 T-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 GKV +VG D ++ ++ G + V QNP +G G+ MV + KV Sbjct: 244 AGGKVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQGEKV 296 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 21/293 (7%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 FSG V L + A +A L T +PF++ + ++ EA+ V +++ S + D Sbjct: 11 FSG--VALAMMAGAASAEGIGASLLTQQHPFYIALADAMKKEAQAENVPLEV--SIANQD 66 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 QL ED K I +P+ S + + +A K GI ++ +D + +N+ Sbjct: 67 LSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVD--VPANNV----- 119 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 +V +FV TDN A G K A + +G E G VA+I+ + + R G + K Sbjct: 120 DVTSFVGTDNFAGGEKAAELMAKTIG-EKGNVAVIDYPTVQSVVD-RIEGFKKGIAKYPD 177 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 IK+VA QP R +AL A N+LQ NP+I I+ D A+ A AV +A +V V+ Sbjct: 178 IKIVAIQPG-ITRPEALSAAQNILQANPDIVGIFGFGDDAALAAASAVKSAKLENQVKVI 236 Query: 248 GTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 G DG+ EAR V+ M +AQ P +G + E + KVI ++ P Sbjct: 237 GFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAV------ETAAKVIKGEEVP 283 >UniRef50_A7II12 Periplasmic binding protein/LacI transcriptional regulator n=42 Tax=Bacteria RepID=A7II12_XANP2 Length = 347 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 27/299 (9%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYA------VVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 + L S GL ++ A AA + A +V+KT +NPF+V MK+G E A LG+ Sbjct: 6 RLLMAASVAWAGLAATSPAGAAEKPADKPIVGIVIKTSTNPFFVKMKEGAEAAAARLGLE 65 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + FA +GD +Q+ E L KGI P S +V + +A KGI ++ LD Sbjct: 66 LRSFAGKMDGDTDAQVTAVESLIAAGAKGILITPSDSRAIVPVLEQARAKGILVIALDTP 125 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG--AEGGEVAIIEGKAGNASGEAR 174 +D G +A TDNV G + LG A+ +VA+++ S + Sbjct: 126 LD------PPGAADATFATDNVLAGKLVGEWAAKTLGANAKSAKVALLDLNVNQISVDVD 179 Query: 175 RN-GATEAFKKASQIKLVASQPADWDRIKALDVA-----------TNVLQRNPNIKAIYC 222 R+ G + F V D RI DV N+LQR+P + +Y Sbjct: 180 RDQGFLKGFGVNVADPAVIGDEKD-SRIVGHDVTLGNEEGGRRAMENLLQRDPYVSVVYA 238 Query: 223 ANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 N+ A G +A+ + G+ VLVV DG + V+ G + AT Q P + G++ Sbjct: 239 INEPAAAGAYEALRSIGRDKDVLVVAVDGGCPGVRNVKDGVIAATAMQFPLAMAQMGVE 297 >UniRef50_C8NCI4 Ribose ABC superfamily ATP binding cassette transporter, periplasmic ribose-binding protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCI4_9GAMM Length = 184 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 13/140 (9%) Query: 173 ARRNGATEAFKKASQ---IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 AR GA F KA+Q K++ASQPAD+DR K L+V N+L P ++ ++ ND MA+ Sbjct: 52 ARERGA--GFAKAAQAHDFKILASQPADFDRSKGLNVMENLLTAQPEVQGVFAQNDEMAL 109 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL---MVDA 286 G +A+ AGK VL VG DG + K V+ G+M AT+AQ P IG G++ ++ Sbjct: 110 GALRAIQAAGKKDLVL-VGFDGTDDGVKAVKGGKMAATIAQQPEKIGEIGVQTADKVLKG 168 Query: 287 EKSGKVIPLDKAPEFKLVDS 306 EK IP+ E KL++ Sbjct: 169 EKVEASIPV----ELKLINQ 184 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 35/259 (13%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN------ 82 ++++ +SNPF+ M KG ++ A ++G + + +QL DL+N+N Sbjct: 44 LMVQDMSNPFFSAMDKGAKEAAASIGATANTQ--------DAQL----DLANQNTQIDTF 91 Query: 83 -YKGIAFAPLSSV--NLVMP-VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 +G+ +S+V N + P + RA + GI ++ +D + +A V TD V Sbjct: 92 IQQGVNLIVISAVDENGIQPAIERAKQAGIIVIAVDTP---------AKSADAVVMTDAV 142 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G K ++ +++G +G V +++G + R G KK IK+V Q + Sbjct: 143 QAGEKSCQYLFEQMGGKG-NVLLVDGTPLQTIRD-RITGCNNVVKKFPGIKVVGQQASKN 200 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA-RK 257 DR L V T++L P+++ I+ ND A+G AV A K G V V G DG PEA + Sbjct: 201 DRASGLAVTTDMLTATPDVQGIFGMNDPSALGAVLAVQQAHKAGTVKVTGVDGSPEAVAE 260 Query: 258 MVEAGQ-MTATVAQNPADI 275 + ++G T QNPA++ Sbjct: 261 LKQSGSPFMGTATQNPAEM 279 >UniRef50_C0Z4C9 Putative ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4C9_BREBN Length = 328 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 134/273 (49%), Gaps = 21/273 (7%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A++++ +W +K G E AK +++ +A E D Q Q++L + + I Sbjct: 42 ALIVRMKHGDYWRTVKLGAEMAAKEYERNLNFYAPDYEEDAQRQMELVQQAIADGSETIV 101 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGN---VEAFVTTDNVAVGAKG 144 AP L + ++ I ++ LD GN V++++ TDN +G K Sbjct: 102 VAPSDERVLREAIKLTRERAIPILVLD----------TVGNDSAVKSYIGTDNYDMGRKA 151 Query: 145 AS---FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 ++I+K G++ ++ A+ + R G + + Q++LVA++ A D+ Sbjct: 152 FEKMVYLIEK----KGQIVLLGTDRIKANAKRREQGVLDLLPREMQVELVANENAPSDKK 207 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 + + +++++P +K + + + A+GVA+ + ++G KV +V D PE + ++ Sbjct: 208 QIGEWTRELIRKHPQLKGVIALDSSTAIGVAEELESSGLRDKVKIVAIDSPPEVLEYLQE 267 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 G ++AT+ Q P +G G+K V+A +G+ +P Sbjct: 268 GIISATIIQKPLSMGYLGVKYAVEA-SNGEAVP 299 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 131/289 (45%), Gaps = 14/289 (4%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 AF+A A++ NPF+ G E +AK LG + + + QS++ + Sbjct: 24 AFSADLIAIITPAHDNPFFKAEAVGAEAKAKELGYETLLMTHDDDANKQSEM--IDTAIG 81 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + K I + V V +A GI +D +I+ A G A + ++N Sbjct: 82 RGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREIN------ATGVAVAQIVSNNYQG 135 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 GA + +G +G V ++ GK + + R G + +K VA Q A+W + Sbjct: 136 AQLGAQEFVKLMGEKGNYVELV-GKESDTNAGIRSQGYHDVIDDYPDLKSVAKQSANWSQ 194 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 +A +LQ NP+IK + NDTMAMG A+ AG+ V+VVG DG + R ++ Sbjct: 195 TEAYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRK-DVIVVGFDGSNDVRDSIK 253 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 +G + ATV Q PA A DA K P + E +L+D +L+ Sbjct: 254 SGGIKATVLQ-PAYAQAQLAVEQADAYIKNKTTPKE---EKQLMDCVLI 298 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 20/283 (7%) Query: 7 YFSGTLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 ++ L L+L A +E V L T + F+ ++++G+++EA ++V + Sbjct: 11 WWLAALCALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQKLTVRLD 70 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 A E D Q E+ + + I P S + +ARA + I + D Sbjct: 71 AG--EFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTAD------ 122 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 ++ G V + + +DNVA G + +L G +VAII+ + E R G E Sbjct: 123 -IRAKEGAVVSHIASDNVAGGRLAGEYAAKRLNGRG-QVAIIDQPYIQSVIE-RVRGFEE 179 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K I++VA D R ++L A ++LQ + A++ ND A GV A+ AG+ Sbjct: 180 ALKPYPNIRVVARLTGDGVRDRSLKAAEDLLQSQRKLDAVFAVNDESAFGVVSAIEAAGR 239 Query: 241 TGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLK 281 G + V+G D EARK++ G+ + A +AQ+P IG ++ Sbjct: 240 KG-IFVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIR 281 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 20/310 (6%) Query: 4 YLKYFSGTLVGLMLSTSAFAA-AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 +LK + + STS A+ A++ + NPF+ +G + +AK LG D + Sbjct: 6 FLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGY--DTLVA 63 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 +GD Q QL E + K + + + + R K GI D +I+ Sbjct: 64 SHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREIN---- 119 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 K G V V+ N GA+ A +L +GGE + G + + + R G + Sbjct: 120 -KTGIAVTQIVS--NNFQGAQLAGEKFAELMGDGGEYVELLGPESDTNAQVRSEGFHDIL 176 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 + K+VA Q A+W + +A ++LQ NPNIK + ND+MA+G A+ AG+ Sbjct: 177 DNFPEFKMVARQSANWSQTEAFSRMESILQANPNIKGVITGNDSMALGAEAALQAAGRK- 235 Query: 243 KVLVVGTDGIPEAR-KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA--P 299 V +VG DG+ R +++ + AT+ Q PA A + AE++ I P Sbjct: 236 DVFIVGFDGLDYVRDSIIKGSNIKATIMQ-PAYAQAQRV-----AEQADLYIRTGSTGLP 289 Query: 300 EFKLVDSILV 309 E +L+D +L+ Sbjct: 290 EKQLMDCVLI 299 >UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFJ9_STRRD Length = 345 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 13/275 (4%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V++K + FW M G + G+ V F SE + Q+QL E+ ++ G+ Sbjct: 53 VIIKASDSSFWQTMIAGAKQSGGDFGLKVSTFGPTSETNIDQQVQLVENSISRGVDGLVI 112 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 AP SS L + RA K G+ ++ +D ++ + E F+ TDN+ G + + Sbjct: 113 APNSSSALNSAIERARKAGLKVITVDSRVTTAS--------EGFIGTDNLKAGMQAGKRM 164 Query: 149 IDKLGAE---GGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKAL 204 + L A+ G V I AG S R +G + Q+K+ + + D A Sbjct: 165 CELLKAQNKTSGSVMIESSVAGIQSLVDRDSGFKQGLANNCPQVKVTLQRYNNNDINTAA 224 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + L N + ++ N+T +G A+A+ + T V VV D P+ + AG + Sbjct: 225 SQVNDALTANRELAGVFADNNTSGVGAARAIQDNNVTDTVPVVAFDSDPQENAALAAGTI 284 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 A V QNP G G+ L +G++ P D P Sbjct: 285 DALVVQNPYFFGYQGV-LAAGMAAAGRIPPRDIDP 318 >UniRef50_B1BAU0 Putative transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BAU0_CLOBO Length = 342 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 11/261 (4%) Query: 32 KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD----FQSQLQLFEDLSNKNYKGIA 87 K+ + F ++KK I+ + K + F S + D + Q Q ++L+ GI Sbjct: 64 KSEGDKFIEEIKKNIQKDCKEKEYN---FISSNSKDSSQIVKYQKQTLQELAISKVDGII 120 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP SS LV+ + + + I +V +D ID + KK G FVT DN Sbjct: 121 LAPASSTELVLEIKKIQEAKIPMVIIDTNIDENEAKKNGLEKIPFVTVDNEKSAYDETKL 180 Query: 148 IIDKLGAEGGEVA--IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +I+K+ E + II G + + R++G +A + S I+ V+ + W + Sbjct: 181 VINKMIEEKKIIKPLIICGDLNSINAMERKDGTIKALAENS-IQPVSIEDGKWKISNGYN 239 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 + LQ+ +I I C ND MA+G Q + + G + +VG DG P + ++ GQ+ Sbjct: 240 ITKIQLQQYQDINLIICGNDEMALGANQYLQETNR-GDIAIVGFDGSPRTIESIKKGQIK 298 Query: 266 ATVAQNPADIGATGLKLMVDA 286 T+ Q+ +I L+ ++++ Sbjct: 299 LTIKQDKKEIAKASLQSIINS 319 >UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Rhizobiales RepID=B5ZNU3_RHILW Length = 329 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 13/282 (4%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 M TS A +++K ++ +W + G K LGV+V + +E D Q+ + Sbjct: 26 MPVTSFAADVTIPIIVKDTTSFYWQIVLAGARKAGKDLGVNVPELGAQAESDINGQISIL 85 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ + +P L P+ A K + ++ +D D K +F+TT Sbjct: 86 ENAVAGKPAAVVISPTEFKALGKPIDEAAKS-VPIIGIDSGADSKAFK-------SFLTT 137 Query: 136 DNVA---VGAKG-ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKL 190 DNV + A G A+ I + G E GE+ I+ G S E RR G + K K +K+ Sbjct: 138 DNVQGGRIAADGLAAAIKEMTGKEEGEIVILTNLPGVGSLEQRREGFLDQIKTKHPGLKV 197 Query: 191 VASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTD 250 +A + D L++ T+++ NP + ++ +N +A GV QA+A K+ V+G D Sbjct: 198 IADKYGDGQATTGLNMMTDLITANPKLVGVFASNLILAQGVGQAIAENKLGDKIKVIGFD 257 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + ++ G + V Q+P +G G+K + K KV Sbjct: 258 SDDKTVGFLKDGAIAGLVVQDPYRMGYDGIKTALAVSKGEKV 299 >UniRef50_A7NNR8 Anti-sigma-factor antagonist n=2 Tax=Roseiflexus RepID=A7NNR8_ROSCS Length = 445 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 28/265 (10%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 FW ++ G+ A GV+V ++Q+++ DL + + P Sbjct: 18 FWSILRHGVRARAADHGVTV---IDQDARTVEAQVEMVADLLRRRVHALILGPARET--- 71 Query: 98 MPVARAWKKGIYLVNLDEK--IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 RA+ + + L L I++D GG +E +V+ + +G I + L A Sbjct: 72 ----RAFAQHLELARLARVPVIEVD-----GGILEGYVSATVRSDERQGLMRIAELLTAR 122 Query: 156 GGE---VAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 GE +A+I G + R + +A ++ +I+++A DW R ++ L+ Sbjct: 123 LGEQLCIALIAGPHNH-----RADILADALRQWPRIRIMAQAVGDWTRESGRNLTEEWLR 177 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 I AI+ AND MA+G A+ GKV+VVG DG+PEA + + +G M ATV Q P Sbjct: 178 AGQPIDAIFAANDPMALGAVDALKAQNLAGKVVVVGFDGLPEALRAIHSGHMLATVNQEP 237 Query: 273 ADIGATGLKLMVDAEKSGKVIPLDK 297 IG + + + A + +P+++ Sbjct: 238 LRIGRQAVDVALQALRG---VPVER 259 >UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Actinomycetaceae RepID=C2KRR4_9ACTO Length = 326 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 12/251 (4%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 +V K + FW +KKG ++ K LG V+ +E QL ++ N I Sbjct: 44 LVSKGFQHTFWQSVKKGALEKGKELGYEVEFIGPKNETAVTEQLDQLKNALNAKPAAIGL 103 Query: 89 APLSSVNLVMPVARAWKK-GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 A L S P+ + K GI ++ D +D D V TDN GAK A Sbjct: 104 AALDS-KAAEPILQQIKNAGIPVIAFDSGVDSDIPLTT-------VQTDNRTAGAKAAEK 155 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKALDV 206 + +G +G + G+A +G+ R G + K+ A IKL+ Q AD +R KA D Sbjct: 156 LAQLMGNKGTVGIVCHGQA-TTTGKGRCFGFQDWMKEHAPDIKLLQEQWAD-ERGKAADA 213 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 A +++ N ++ A+Y +N+ A GV Q V AGK G++ +VG D +++G Sbjct: 214 AKAIVKSNTDVTAMYGSNEVTAAGVLQGVKEAGKMGQITIVGFDSGKAQIDAIKSGDEAG 273 Query: 267 TVAQNPADIGA 277 + Q P +GA Sbjct: 274 AITQAPVKMGA 284 >UniRef50_Q89KM1 ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89KM1_BRAJA Length = 352 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 16/258 (6%) Query: 43 KKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAR 102 K+ E K V V F + D Q ++++++ + +A L PV + Sbjct: 78 KQAAEFWGKLFNVEVTWF--DGQLDAVKQRAAIDNMASQKWDFVAIQAFGIGTLTQPVQK 135 Query: 103 AWKKGIYLVNLDEKI-DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAI 161 G ++++D I +D + NV +F+ DN +GA + + +G +G ++ + Sbjct: 136 MIDAGTPVIDMDTLIAPLDQI-----NVHSFLAPDNEFMGASVTQALCNAMGGKG-KIIM 189 Query: 162 IEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIY 221 +G G+ + R G K+ I+++ +QPADWD K + L + P I A + Sbjct: 190 TQGALGHTGAQGRAKGFNNVVKQFPGIEVLDTQPADWDVSKTARLWETYLTKYPQIDAAF 249 Query: 222 CANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPA---DIGA- 277 ND MA+ A + G+T +L+ G D +P A + V G+M ATV +NP+ GA Sbjct: 250 FHNDDMALAAANIMKARGRT-NILIGGVDAMPPAIQAVSEGRMFATV-RNPSCRIHGGAI 307 Query: 278 -TGLKLMVDAEKSGKVIP 294 G+ +V EKSG+ IP Sbjct: 308 IAGVSAVVGGEKSGQGIP 325 >UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH32_NAKMY Length = 350 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 8/257 (3%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 F++ M+ GIE EA LGV+V+ + D Q + + + I AP + Sbjct: 77 FYITMQCGIEAEAAKLGVTVNTQGG-QKFDPTLQTPILDSVVASKPDAILIAPTDVTAMQ 135 Query: 98 MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 P+ A GI +V +D + + + V++DN GA I DK GG Sbjct: 136 RPLENAAAAGIKVVLVDTTTEDPSFAVSQ------VSSDNEGGGAAAFKAIKDK-NPNGG 188 Query: 158 EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNI 217 +V +I G ++ +AR G +A K S + Q + D A + T LQ++P+I Sbjct: 189 KVLVISTDPGISTVDARVKGFEDAVGKDSTFDYLGVQYSHNDPATAAQLVTAALQKDPDI 248 Query: 218 KAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGA 277 I+ N A G + V AGK+ ++ +VG D P K ++ G + A VAQ PA IG Sbjct: 249 VGIFATNIFSAEGSSTGVKQAGKSDQMTIVGFDAGPNQVKALKDGTVQALVAQQPATIGT 308 Query: 278 TGLKLMVDAEKSGKVIP 294 GL + + G + P Sbjct: 309 DGLDQAIASLDGGTITP 325 >UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R356_ARTAT Length = 314 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 144/287 (50%), Gaps = 24/287 (8%) Query: 29 VVLKTLSNPFWV----DMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 V + + F+V MKK DE L V + G+ Q+ ++L + Sbjct: 32 VSMPEFHSLFYVAAVDGMKKAAADEGYELVVL------NANGNSSQQVNQVQNLVTQQVG 85 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + FA + VA A I ++ +D++ G+V F+ +D+V + Sbjct: 86 AVIFAMQDATAGAAGVAEAKGANIPVIAIDQRPQ--------GDVTTFIGSDSVKASTEL 137 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 ++ ++G +G +AII+G G+++ R G +K IK+V++ ADWD KA Sbjct: 138 CDYLAKQMGGKG-NLAIIKGVLGSSTEIERSKGCGSILEKNPDIKVVSTTNADWDENKAY 196 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 +VA +VL NP ++AI+ ND MA+G A+A A AG++ + +V DG P+ +E+GQ+ Sbjct: 197 NVAQDVLTANPELQAIFAQNDGMALGAAKAAAQAGRS-NLKIVSVDGFPQVYDAIESGQV 255 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 AT++Q P +G ++ + A SG+ + K +L ++LVT+ Sbjct: 256 LATMSQEPYQMGELAVRTAIKA-MSGEAGSIQKE---QLQPTVLVTK 298 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 14/254 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L T +NPF+ + I+ E G V++ + E D Q +D + I Sbjct: 55 VSLLTTTNPFFNVIADNIKSELVKEGYDVEVVSG--EFDVARQKNQVKDFIVAGHAAIVL 112 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P S + + A GI + D G V + + TDN+ G + A + Sbjct: 113 CPCDSRGIGPAIQEATAAGIPVFTADIA-----CLAPGAEVVSHIATDNLGGGKQAAEAM 167 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK------ASQIKLVASQPADWDRIK 202 I+ +G+ GG+V I++ KA S R G E K +S I +V+ P D + K Sbjct: 168 IEAVGSAGGKVVILDFKAAE-SCILRVQGFKEVIDKHNSENPSSAITIVSELPGDGQKDK 226 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 + A + LQ +P++ I+ ND A+G A+ A K +V +VG DG P+ + ++ G Sbjct: 227 SYKAAEDALQAHPDLAGIFAINDPSALGARAALEKANKADQVKIVGFDGQPDGMQAIDEG 286 Query: 263 QMTATVAQNPADIG 276 ++ A Q+P IG Sbjct: 287 KIFADPIQHPDQIG 300 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 22/250 (8%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQ-SQLQLFEDLSNKNYKGIAFAPLS 92 + NP+++ ++ I++E + + ++ D Q SQ+Q D +GI LS Sbjct: 70 MENPYFLTLESAIKEEVDGKNCELIVKDPKTDPDMQASQIQEMID------EGINAIILS 123 Query: 93 SVNL--VMPVARAWKKG-IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 V+ + P A K+ + +VN+D ++ K V+A++ +DN G +I Sbjct: 124 PVDWEKITPSLEALKEADVKIVNVDTQV------KEMDYVDAYIGSDNYNAGVLCGEDLI 177 Query: 150 DKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ-IKLVASQPADWDRIKALDVAT 208 K +GG+VAI+E N+ E R G E KA ++VA + + K+L+ A Sbjct: 178 -KRCPDGGKVAILECPTQNSVNE-RITGFEETLAKAENGFEIVAREDTSGEFQKSLEAAQ 235 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE--AGQMTA 266 +L N +I AI C ND MA+G A+ N + G++L+ G DG P+ +K ++ Q+ Sbjct: 236 KILSENSDIVAIMCGNDQMAVG-AKTAMNVAEQGQILIYGVDGSPDIKKELKKTENQIAG 294 Query: 267 TVAQNPADIG 276 TVAQ+P +G Sbjct: 295 TVAQSPISMG 304 >UniRef50_B2SY92 Periplasmic binding protein/LacI transcriptional regulator n=7 Tax=Burkholderia RepID=B2SY92_BURPP Length = 317 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 + + L+NP++V M+K + D A ++G +V + + + D Q+ ED+ K + Sbjct: 45 MTFQELNNPYFVTMQKALNDAAASIGATVVV--TDAHHDVSKQVSDVEDMLQKKIDILLV 102 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P S + + + + + A G V++FV + N G ++ Sbjct: 103 NPTDSTGI--------QSAVTSAKKAGVVVVAVDANANGPVDSFVGSKNYDAGEMACEYL 154 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +G G EVAI++G E R G A KA +KLV +Q +R AL V Sbjct: 155 AKSIGGSG-EVAILDGIPVVPILE-RVRGCKAALAKAPGVKLVDTQNGKQERATALSVTE 212 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA--GQMTA 266 N++Q +PN+K ++ ND +MG A+ ++GK K+ V DG PEA ++ + Sbjct: 213 NMIQAHPNLKGVFSVNDGGSMGALSAIESSGKDIKLTSV--DGAPEAIAAIQKPNSKFVE 270 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 T AQ PAD L + + A+K G +P + K++D Sbjct: 271 TSAQFPADQVRIALGIAL-AKKWGANVPKTIPVDVKMID 308 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 87/272 (31%), Positives = 131/272 (48%), Gaps = 18/272 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L T +PF++ +K IE EA V +++ S + D Q+ ED K I Sbjct: 43 VSLLTQQHPFYLSLKDAIEKEAAAQNVKLNV--SIANQDLNKQISDIEDFITKKVDAIII 100 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 +P+ S ++ V +A I ++ +D + G +V A V TDN G K A Sbjct: 101 SPVDSKGVLAAVKKAEAANIPVITVD-------VPAIGVDVAAHVATDNYT-GGKIAGEE 152 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 + +L GEVA+IE ++ + R G E K IK+VA Q A R +AL A Sbjct: 153 MARLLNGKGEVAVIEYPTVDSVVQ-RIEGFKEVIAKYPDIKIVAIQ-AGITRPEALTAAQ 210 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV-EAGQMTAT 267 N++Q N N+ I+ D A+ AV +AGK ++ V+G DG+ EAR V + A Sbjct: 211 NMIQANKNLGGIFGFGDDAALAAVAAVKSAGKEDQIKVIGFDGMQEARDAVTKEKSFAAV 270 Query: 268 VAQNPADIGA----TGLKLMVDAEKSGKVIPL 295 + Q P D+G T LK++ E+ K IP+ Sbjct: 271 ITQYPEDMGKIAVDTTLKIL-KGEQVEKNIPV 301 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 16/290 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L + S ++L T A V+ K++ +P+W +++G++ K LGV F Sbjct: 1 MRKLLVFLS-----VVLITGLSLALTIGVIGKSV-HPYWSQVEQGVKAAGKALGVDTKFF 54 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 P + D +QLQ+ E + GIA AP ++ + +A + GI ++ LD Sbjct: 55 V-PQKEDINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDT----- 108 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + +G V ++ TDN G A I+ +L G+V I G + R G + Sbjct: 109 DSPDSGRYV--YIGTDNYQAGYT-AGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKD 165 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A S+I++V + D +A+ +A L +P++ A + A V NAGK Sbjct: 166 AIAD-SEIEIVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAYNGPSQALVVKNAGK 224 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 GKV +V D P+ + V+ G + AT+ Q P +G + ++ K G Sbjct: 225 VGKVKIVCFDTTPDILQYVKEGVIQATMGQRPYMMGYLSVTVLYLMNKIG 274 >UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I6_RUMGN Length = 337 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 15/276 (5%) Query: 16 MLSTSAFAAAEYAVVL--KTL--SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQ 71 +L S+ Y +++ KT+ SN FW + +G + A+ G +++ S SE D++ Q Sbjct: 34 VLQDSSQNKRTYKIIMVPKTIDESNDFWTGLIEGAKLGAEEFGCEIEVVGSDSEDDYEGQ 93 Query: 72 LQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA 131 +L E+ KN AP S + V A GI ++ +D ID K+ V Sbjct: 94 NRLIEESIKKNPDAFLIAPCSYTHTTEAVQEAINAGIKVILVDSVID----KEIANGV-- 147 Query: 132 FVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKL 190 V TDN G + +F L + ++ ++ G+++ R +G E + ++I+ Sbjct: 148 -VATDNFKAGKELGTFAKTILKPD-SKIGVVAHVKGSSTATEREDGIREGLGEDQNRIQD 205 Query: 191 VASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTD 250 + + +D A D+ +L+ P I + N+ A+G A+ V G +V VVG D Sbjct: 206 IVYCNSSYDL--ASDLTEKMLKERPEIDVVIGTNEYSAVGAARGVKKMGMEDQVKVVGFD 263 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 E +++EAG V Q P +IG G++ V A Sbjct: 264 NSVEQIQLLEAGVFQGIVIQKPFNIGYLGVEQAVKA 299 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 10/244 (4%) Query: 32 KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 91 ++ SNPF I ++AK+LGV + + D +Q ED+ + K + AP Sbjct: 90 ESTSNPFRSTETDSITNQAKSLGVK--LIQRNANADVNAQNSQIEDMIAQGAKVLIVAPE 147 Query: 92 SSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDK 151 +S L +A A K I ++ +D + A + AF+ ++ A + Sbjct: 148 NSDGLGPALAEAKAKKIPVLTIDRTV----TGTACSDFIAFIGSNFYGQAQIAADDLATA 203 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDVATNV 210 G++ +VAI+ G GN R NG + K K + +VASQ +D+ V + Sbjct: 204 TGSQA-KVAILSGTPGNNVTTDRTNGFQDQVKAKYPNMTVVASQTGKFDQTDGQSVMAQM 262 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAG-KTGK-VLVVGTDGIPEARKMVEAGQMTATV 268 LQ NP I A+Y ND MA+G QA+ AG K GK + +V DG +A + V AG + A V Sbjct: 263 LQANPGITAVYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAGTIYADV 322 Query: 269 AQNP 272 NP Sbjct: 323 ETNP 326 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 13/256 (5%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 +P + M KG E A G V IFA + D Q ++ + GI P S Sbjct: 43 FDHPVYQLMMKGAEKVADEAGCKV-IFAD-GKDDPSVQASHIDNFIAQGVDGIILTPTVS 100 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNV--EAFVTTDNVAVGAKGASFIIDK 151 L+ V + GI LV D + ++ G + EA V+ D V G G + Sbjct: 101 DPLIPAVKKVNDAGIPLVMADRR-----MQTHGQPIKWEALVSWDMVKSGTIGGEQTVKA 155 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 +G +G + ++EG G S R N E +K IK++A PA+++R K +V N+L Sbjct: 156 IGGKG-NIVVVEGTPGAGSTIDRGNAFYEVIEKYPDIKILAKIPANFNRAKGQEVTENIL 214 Query: 212 QR-NP-NIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVA 269 QR P I AIY D M G QA+ AG+ G+ ++ DG EA ++ A ++ Sbjct: 215 QRFKPGEIDAIYYMADEMTFGGLQAIKAAGRLGEFKIISVDGQKEAMDLLRAREIDYEAI 274 Query: 270 QNPADIGATGLKLMVD 285 +P D A ++++ D Sbjct: 275 FHPDD-QAVAVRILCD 289 >UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55A58 Length = 331 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 7/261 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + A+V + PF++ M+ G ++EAK LG + + A P + D Q + L + Sbjct: 44 KLALVPGVQAEPFYISMQCGAQEEAKKLGYELTVQA-PQKFDATMQTSIVNSLGSNPPAA 102 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + AP ++ P+ + +G +V +D + K + V++DN G A Sbjct: 103 LLVAPTDDQAMLAPIQQVKNRGAKIVEVDTSL------KDKSVAVSSVSSDNAEGGKLAA 156 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + +G + G V I++ AG ++ AR G + K +K V Q + +A Sbjct: 157 QTMAKLVGDKPGSVLILDTIAGTSTTAARAKGFEDELKNHPNLKSVGIQFTQNEPEQAAS 216 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 T L P++ I+ N G A + NAGK GKV +VG D P ++ G+ Sbjct: 217 KVTAALVSTPDLVGIFATNLNTGEGAATGLRNAGKIGKVNLVGFDASPSEVDGLKKGEYQ 276 Query: 266 ATVAQNPADIGATGLKLMVDA 286 A +AQ+PA IG G+ V A Sbjct: 277 ALIAQDPAQIGTKGVDQAVAA 297 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 12/283 (4%) Query: 20 SAFAAAEYAVVLKTLSNP-FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 SAFAA ++ V +++ +V +K EA +V++ S + D QL ++ Sbjct: 22 SAFAADKFVVGYANMADTDVFVMARKNAFIEASKSDPAVEVNFSDANNDVSKQLDQIDNF 81 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + I P+ +V V +A + GI ++ L ++ AGG FV + N+ Sbjct: 82 IAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIAL-------GIQSAGGKY-TFVGSKNI 133 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G ++ + L +G ++ +EG G + + R+ G +A + S + +AS A++ Sbjct: 134 DAGRLQGEYMKEHL-PKGAKILYLEGTPGLSHTQERKKGFEDALGR-SDVTTLASLSANY 191 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 DR + + V + +Q P AI AND MA+G +A+ A + V++ G DG +A Sbjct: 192 DRAEGMKVTEDWIQSFPKFDAIVAANDQMALGALEALQGADRLKGVMISGVDGTADALNA 251 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 ++AG M+ T+ Q+ A ++ V+ K G+ P +K F Sbjct: 252 IKAGTMSQTIFQDAAGQAKAAFEV-VEGLKKGEDAPAEKLVPF 293 >UniRef50_Q92YT4 ABC transporter, periplasmic solute-binding protein n=2 Tax=Alphaproteobacteria RepID=Q92YT4_RHIME Length = 372 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 4/197 (2%) Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 G Y+ + K D + G N + +T + + A + + +G EGG V + G A Sbjct: 134 GGYISTIWNKTDDLHPWDFGDNYVSHMTWSDEKPAEETARILFEAMGGEGG-VVHLGGIA 192 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKAIYCAND 225 N R NG A K I+L+ +QPADWD K + ++ L R IK ++CAND Sbjct: 193 ANNPAVERLNGLKNALKDFPNIELLDAQPADWDTQKGAALMSSFLTRYGDRIKGVHCAND 252 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 +A GV +A+ G G + +V DG PEA +MV GQ+ ATV NP G L Sbjct: 253 NIAYGVIEALRAEGIEG-MPIVSYDGNPEAVQMVMDGQLLATVFTNPHWGGGITSALAYH 311 Query: 286 AEKSGKVIPLDKAPEFK 302 A +G P ++ E + Sbjct: 312 A-ATGSFKPSEEPKEHR 327 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 16/258 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDF--QSQLQLFEDLSNKNYKGI 86 + L +L N F V + + +A LGV + I+ +G++ +Q+ E + + I Sbjct: 58 MTLYSLKNEFTVRLSNAAKKKAAELGVELKIY----DGNYDPNTQINQVETMISDGVDAI 113 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P + + V +A I ++ ++ ++D + L ++V + +V G Sbjct: 114 ILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSEKLT-------SYVGSKDVYAGELEMQ 166 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 I DK+G +G + I++G G ++ R G KK IK++A + A+W R +A+ V Sbjct: 167 AIADKIGGKGN-IVILDGPLGQSAQLERSEGIQNVLKKYPDIKVLAEKTANWSRSEAMTV 225 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N LQ I A+ ND MA+G +A+ K + +G DGI +A VE G + A Sbjct: 226 MENWLQAFDKIDAVVAENDEMALGARKAI--EAKKLDIPTIGVDGITDALDAVEKGTLIA 283 Query: 267 TVAQNPADIGATGLKLMV 284 T+ Q+ A G+ L++ V Sbjct: 284 TIFQDGAGQGSKALEIAV 301 >UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Gammaproteobacteria RepID=C6V848_ECOBD Length = 357 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/279 (30%), Positives = 130/279 (46%), Gaps = 11/279 (3%) Query: 17 LSTSAFAA-AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 +S+SA A VV K + FW +K G E AK LG E Q+QL Sbjct: 57 VSSSALAKDLNLPVVSKGFQHEFWQTVKMGTEAAAKELGDKTSYVGPADETQIAEQIQLV 116 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ + G+ A L + L V A +GI +V D I+ D +FV T Sbjct: 117 ENAMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGINSDI-------PVSFVAT 169 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQ 194 +N GA+ A + ++ +G +V II AG +S R G E K K IK++ Q Sbjct: 170 NNRKAGAQAADALASQVNNKG-KVGIIAHVAGTSSAIERSEGFMERMKEKYPDIKVLPVQ 228 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 +D D KA+D +++Q NP++ IY N+ +GVA A+ + GKV V+G D Sbjct: 229 YSDGDPQKAMDKTIDMIQANPDLAGIYGTNEGSTLGVANAIDSQNLKGKVKVIGFDSTEA 288 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 ++ G + V Q+ IG G+K + +A SG+ + Sbjct: 289 IINFLKNGVIQGFVVQDAYQIGYQGIKTL-NAALSGQAV 326 >UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=Pseudonocardineae RepID=A4FMX8_SACEN Length = 323 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 7/256 (2%) Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 PF+V M+ + +A G +++ A P + + Q Q+ + + AP L Sbjct: 47 PFYVSMECAAKQQAAAAGYNINAQA-PEKFEQAEQSQMLTGIIGTRPGAVIIAPTDDKAL 105 Query: 97 VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG 156 P+ +A G+ +V +D ++ ++ A +++DN A G A + G + Sbjct: 106 AAPLQQAKNNGVQVVEVDTALEDRSIAVAS------LSSDNYAGGKLAAQTLAQLTGGKP 159 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 G V + KAG ++ + R G E K ++L+ +Q + + A + + L NP+ Sbjct: 160 GAVLALNTKAGTSTTDERAKGFEEEIAKHPNLRLLPTQYTENEPATAAQIVSATLAANPD 219 Query: 217 IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIG 276 + ++ N G A+ANAG++G+V +VG D P+ + + G++ A +AQ+PA IG Sbjct: 220 LVGVFATNLNTGEGAGTALANAGRSGQVQLVGFDASPKQVEDLRNGRVQALIAQDPAAIG 279 Query: 277 ATGLKLMVDAEKSGKV 292 G+ + A K V Sbjct: 280 REGVDRAIAAIKGQPV 295 >UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional regulator n=15 Tax=Bacteria RepID=A8L4W4_FRASN Length = 363 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 18/273 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ K+ +NPF+V M+ G + A+ V + +GD+ SQ+ E++ +GI Sbjct: 62 LITKSYTNPFFVKMRDGAQQAAREQKVELLTATGRFDGDYASQVSAIENMVAAGARGILI 121 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P S +V + +A +G+ ++ LD D ++ V+A +TDN G + Sbjct: 122 TPNDSKAIVPAIEQARHRGVLVIALDVPTDPESA------VDALFSTDNFKAGILIGEYA 175 Query: 149 IDKLGAEGGEVAIIEGKAG-NASGEARRNGATEAF----------KKASQIKLVASQPAD 197 +G +A ++ + G R NG F ++A+ +V S+ + Sbjct: 176 RAAMGDTPARIATMDVSSHITGGGLLRHNGFLVGFGALDVTVSETQQATPPSVVCSRDSK 235 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 D+ K + L+ +P+I +Y N+ A G A+ AGK V++V DG + Sbjct: 236 GDQAKGRTAMADCLRTDPDINLVYAVNEPAAFGARTALDAAGKA-DVMIVSIDGGCTGVR 294 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 V G++ AT Q P + G+ +VD K G Sbjct: 295 AVRDGKIAATSQQYPLKMAEQGVAAVVDYVKDG 327 >UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GKD2_9ACTO Length = 432 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 20/282 (7%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG--IAFAP 90 TLS P++V M K ++ AK GV ++ ++ + GD EDL +KN I+ P Sbjct: 155 TLSGPYFVGMDKAVKARAKKKGV--EVVSTDAGGDAAKLASNVEDLLSKNVDAVIISGGP 212 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 L S V+ ++ K LV+ K G +++ DN A+G + F+ Sbjct: 213 LESAPAVLNALKSAGKPAILVDR---------KFRSGTYASWIGPDNEAIGRQDGEFLAA 263 Query: 151 KLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNV 210 KLG + I G A N+ G AR G +A A + +W L V ++ Sbjct: 264 KLGKDATVALIKGGPADNSIGLARTTGVKKALDAAGIRMVEGPDYGNWASDGGLTVMESL 323 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 L + ++ A++C ND M +G +AV +AG+ ++++ G DG EA + + AG Sbjct: 324 LASHKDLDAVFCENDAMCLGAQRAVKDAGREKEIVLAGVDGQAEALQAIAAGGNYLVTGL 383 Query: 271 NPAD-IGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 N AD IG+ GL VD ++ K + +VDS VT+ Sbjct: 384 NDADQIGSLGLDRAVD------ILDGKKPEKDTVVDSPQVTK 419 >UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QS72_MYCS2 Length = 348 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 8/257 (3%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 F++ M+ G ++EA LGV+V+ P + D Q + + + + AP + Sbjct: 73 FYITMQCGAQEEAANLGVTVNT-QGPQKFDPTLQKPILDSIVASKPDALLVAPTDVQAMQ 131 Query: 98 MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 MP+ +A GI +V +D + + + + +DN G + A I +L EGG Sbjct: 132 MPLEQAAAAGIKVVLVDTTTNDPSYAVSA------IASDNEG-GGRAAFEAIKQLHPEGG 184 Query: 158 EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNI 217 +V ++ G ++ +AR G EA + V Q + D A + LQR+P++ Sbjct: 185 KVMVMGLDPGISTTDARTKGFEEAVAEDPGFTYVGVQYSHNDPATAAQLIGAQLQRDPDL 244 Query: 218 KAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGA 277 ++ AN A G A + AGK+ +V VVG D P + + G + A VAQ+P IG Sbjct: 245 VGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDAGPNQIQALREGTVQALVAQDPGTIGK 304 Query: 278 TGLKLMVDAEKSGKVIP 294 G+ V A + G+ P Sbjct: 305 FGVDEAVTALEGGENSP 321 >UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Clostridiales RepID=C2L0R0_9FIRM Length = 333 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 16/256 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L ++ F+ ++ +E++AK G ++D+ + GD QL +D K I Sbjct: 63 VSLLNSTHVFYNSIQTAMEEQAKEYGWTLDV--QDAAGDANKQLGQVQDFITKKVDAIVI 120 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 AP +S + A K GI + +D D G V TDN G A ++ Sbjct: 121 APTNSAGSKSMIELAEKAGIPVFTMDIASD--------GKPVTHVATDNKKGGQLAAEYV 172 Query: 149 IDKLGAEG-GEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKALDV 206 ++ + E G VA+I + + R G T+ K+ A IK+V Q D+ KA DV Sbjct: 173 VNNILTEKKGNVAVITYSEIESCVD-RETGFTDYLKENAPDIKVVDVQNYSGDQQKAADV 231 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA-RKMVEAGQMT 265 N+L +N NI ++C D A+G ++ A K ++G DG PE ++ + G Sbjct: 232 MQNMLLKNDNIDVVFCVGDPAAIGALSSITAANAATK--IIGYDGNPEGVAEIKKGGNWV 289 Query: 266 ATVAQNPADIGATGLK 281 A VAQ+PA IG T L+ Sbjct: 290 ADVAQDPAGIGKTTLE 305 >UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alphaproteobacteria RepID=A6UE72_SINMW Length = 310 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 23/300 (7%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 L L SA + + + L F+ +K G+E A+ G+ V + ++ D +Q+ Sbjct: 16 LALPASAAEVKKIGLAVPNLQADFFNQIKLGVEKHAREKGLEVVVV--DAKNDTNTQVSQ 73 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 +DL ++ + P + +P A + GI ++N+D + G + F+ Sbjct: 74 VQDLMIQDIDAFIYIPAGAAAAAVPTRLAREAGIPVINVDRVPE-------GAPGDTFIA 126 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 ++V FII+K G G ++AII G+ G R G A + ++L+ Q Sbjct: 127 GESVESAYAVCKFIIEKAGGSG-KMAIIHGQKGTTPEVDRFTGCKRAIDENKGVELIDQQ 185 Query: 195 PAD-WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 ++ W + +A N+LQ NP+I I+ D +AMG A+AV A + KV++ G DG Sbjct: 186 WSNMWSADEGFSIAQNMLQANPDITIIFGQADGLAMGAAKAVDVANLSDKVIIGGYDGDV 245 Query: 254 EARKMVE--AGQMTATVAQNPADIG----------ATGLKLMVDAEKSGKVIPLDKAPEF 301 A + + G AT Q+ +G A G K+ + + D APEF Sbjct: 246 SALEYLARCKGPFIATATQSTQKMGVLAVESALAVAAGEKVEERQTPNAVLTTCDNAPEF 305 >UniRef50_A6KXA9 ABC-type sugar transport system, periplasmic component n=1 Tax=Bacteroides vulgatus ATCC 8482 RepID=A6KXA9_BACV8 Length = 225 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 4/179 (2%) Query: 29 VVLKTLSNPFWVDMKKG-IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 +V+K+L F+ MK+G I+ A + + + ++ + + Q+ L L ++ I Sbjct: 9 LVMKSLQADFFKVMKEGAIQYAAPLPFLDLVCVGTATQTEVEEQVDLMYSLIHQQVDAIV 68 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 P+ S LV PV A +KG+ ++N+D ++D L++AG V AFV DN A + Sbjct: 69 LVPIDSKALVQPVVEAVRKGVPVINIDIRLDTQLLEQAGVEV-AFVGPDNFAAAYEVGKL 127 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 + KL E +VAIIEG A + + R+ G +A ++ ++LVAS+PADW+ KA +V Sbjct: 128 LDKKLRNE-DKVAIIEGLAAADNAQQRKRGFIKAIEEKG-LRLVASEPADWETEKAAEV 184 >UniRef50_Q2S7D2 ABC-type sugar transport system, periplasmic component n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7D2_HAHCH Length = 318 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 10/285 (3%) Query: 12 LVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQ 71 L+ LS + + +VLK SN +W + G + A GV++ ++ +GD Q Sbjct: 26 LIASPLSQADIHQPKLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQ 85 Query: 72 LQLFE-DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVE 130 +Q+ LS + AP S+ +L VA+ + I ++ +D + AG + Sbjct: 86 IQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL-------AGDAHQ 138 Query: 131 AFVTTDNVAVGAKGASFIIDKLG-AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIK 189 V TDN A G A ++ L ++ +A++ +AGNAS + R G + +K +I+ Sbjct: 139 GLVATDNYAAGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIR 198 Query: 190 LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGT 249 ++A+ A DR A +L+ P I ++ N++ +G A+ +G + + +G Sbjct: 199 IIAAPYAGDDRGAARSEMLRLLKETPTIDGLFTPNESTTIGALVAIRQSGMSKQFGFIGF 258 Query: 250 DGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 D E + AG+++ V QNP +G ++ +D + GK IP Sbjct: 259 DQTEELEAAMYAGEISNLVVQNPEYMGYLAVQRALDLVR-GKPIP 302 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 6/233 (2%) Query: 44 KGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARA 103 + +++ A+ + V + S D QL E + I P + RA Sbjct: 51 RAMQERARQVPGGVTLQVEDSGSDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERA 110 Query: 104 WKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIE 163 + GI LV L+ + ++ FV TD +G ++ +K+G +G ++AI+ Sbjct: 111 TRAGIPLVYLNSRPEVREFPAG----VVFVGTDERRLGQMQMEYLAEKMGGKG-DLAILL 165 Query: 164 GKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCA 223 G+ + R G + + QI++V Q DW R K LD+ N L A+ Sbjct: 166 GRLAHDDTRKRTAGVKDVLARYPQIRVVEEQSGDWQRDKGLDLTNNWLSSGREFDAVVAN 225 Query: 224 NDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIG 276 ND M +G A A+ AG+ +V V G DG P+ + GQ+ T+ ++P +G Sbjct: 226 NDEMGIGAAMALRQAGRR-EVSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMG 277 >UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C307_9CLOT Length = 372 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 20/276 (7%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ K L W M++ + A L + +I + E D Q++ F+ + ++ K I Sbjct: 47 LLHKGLDYYAWAAMQEAFDKYAGDLDCNYEILNA--ENDVSKQVEQFKTVLTQDPKAIIV 104 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 + S +L+ V A GI + D I GG+++ V DN+ G + A I Sbjct: 105 TAIDSESLIDCVKEANDAGIPVGVYDTPI-------TGGDIDITVDCDNLMAGQQAAEII 157 Query: 149 IDKL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 +DKL G E G+V + G + + R+ G +K I+++ + DR+ + Sbjct: 158 VDKLKEKNGEEKGKVLNVFGDLASQVMQERKQGFDNVMEKYPNIEVIEAS-GKGDRLLSQ 216 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLVVGTDGIPEARKM 258 D A+N L N +I A++ D GV +AV +AGK G +++V DG P A Sbjct: 217 DAASNALAANEDIDAVHAPCDNAFYGVYEAVESAGKLKKVGEEGHIIMVSLDGEPAALDR 276 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 + G M TV + + A L++M GK +P Sbjct: 277 ISEGYMDGTVNLDWHAVAAICLEMMDKYIFEGKDLP 312 >UniRef50_C2BT70 Ribose ABC superfamily ATP binding cassette transporter, ribose-binding protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BT70_9ACTO Length = 333 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 114/259 (44%), Gaps = 28/259 (10%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 AV+L +NP++V MK+G EDE G V++ + D +QL + + KN +A Sbjct: 54 AVLLPNQTNPYYVAMKEGFEDEGSKNGFKVEV--QIANDDDANQLAQAQAMLGKNPCALA 111 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 P+ S V A KG+ + ++ D D LK G +V ++ DN A GA+ A Sbjct: 112 LNPVKSEPAAAIVKAANDKGVPVFTVNISADPDALKAQGASVVQYLGADNAAGGAQMAEQ 171 Query: 148 IIDKLGA----------EGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 I+ LGA E EV ++E R G +A K K+VA + Sbjct: 172 IMKDLGADTAMEIGFVTEPDEVVVVE----------RDEGFKKAIAKNPNAKVVAEVDGN 221 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 AL+V + +LQ +P I I+ + A G +AV +GK KV A + Sbjct: 222 VKLTDALNVTSEMLQGHPGISVIFASTGPAAQGAVEAVKASGKDIKVYGFC------ASE 275 Query: 258 MVEAGQMTATVAQNPADIG 276 M A VAQ P D G Sbjct: 276 MQTNDAYPACVAQEPEDYG 294 >UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMK8_9CLOT Length = 329 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 11/259 (4%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 ++ SNP+W +K G E AK +D F P ++ GI Sbjct: 43 TLISHVYSNPYWKYIKLGAEKAAKQRNAVID-FQGPDTASAGEGIKFINMAYAAKVSGI- 100 Query: 88 FAPLSSVNLVMPVA-RAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 + + PV + GI +V +D D +N K+ A+V TDNV G GA Sbjct: 101 ITYVQDEAMYKPVIDKVLAGGIPIVTVDS--DAENSKRL-----AYVGTDNVTAGRVGAK 153 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +I +G G V II G + R NG TE K S++ + + +D ++A Sbjct: 154 EMIHHVGIYGN-VGIIMGGKNVKNQIERVNGFTEYIKSNSKLNISEIESSDSYLLEAELA 212 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 +L N +IKA++C + G A+A+ + G KV ++ D +PE ++ G +T+ Sbjct: 213 TKKILINNKDIKAVFCTSALDGQGAAKALISMGAAEKVKIICFDDLPETLDYIKNGTITS 272 Query: 267 TVAQNPADIGATGLKLMVD 285 T+ Q+P +G + +++D Sbjct: 273 TIVQDPYGMGYKAVNIIMD 291 >UniRef50_C7GDR0 Transcriptional regulator, LacI family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDR0_9FIRM Length = 339 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 17/269 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGV-SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 V+L NPF+ ++ G+ + + L + + D QSQLQ ++L + G+ Sbjct: 65 VLLFGAENPFFDEVMDGLRQKLEELSIYGCTVIERRISFDLQSQLQTIDELLKEEIHGLI 124 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 +P + + + W+ GI + ++ DM + K+ A+V +D G A Sbjct: 125 LSPYNDPAIQEKIDLLWENGIPCITIN--TDMPDSKRI-----AYVGSDYHKCGQTAAG- 176 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDV 206 ++ + V I+ G E R +G T K I++V D K+ +V Sbjct: 177 LLHLFSGDYASVGIVTGSHNVLCHEERISGFTSHLHTKHPNIRIVDVVENGDDDYKSYEV 236 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGV---AQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 +++L R+P++ A+Y A GV +AV NA + ++ D + +M+ G Sbjct: 237 VSDLLDRHPDLSALY----FTAAGVYGGCRAVLNASLQRPLKIITFDAVLSTCEMIRNGV 292 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKV 292 ++AT+ Q P + GA L L+VD +GK+ Sbjct: 293 ISATICQQPDEQGARSLSLLVDYLLTGKL 321 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 16/295 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAA---AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 M KYL + V L+ S SA+ A + K+ FW M+ G+E + G + Sbjct: 1 MKKYLTFLFACWV-LLSSGSAWPADNKLNIVFIPKSSDQMFWDLMRNGVERAMQEEG-QI 58 Query: 58 DI-FASPS-EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 D+ + P+ D SQ+++ + + I P LV PV +A + GI +V +D Sbjct: 59 DLTWRGPAYNDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDS 118 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 +D G+++ FVTTDN A G A + + +G + G V ++ AG+AS + R Sbjct: 119 ALD------GSGHLQ-FVTTDNHASGQLAARQLAELMG-QRGRVVLLRTVAGSASTDDRA 170 Query: 176 NGATEAFK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQA 234 G + A I +VA KA A+ +L ++ + AI+ N++ G+ +A Sbjct: 171 RGFIDYLSANAPAISIVADVYGGGSAGKARHSASALLAKSADFDAIFAVNESATDGMLRA 230 Query: 235 VANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 + AG G+ +G D P + +E ++ + Q+P +G +K +V A ++ Sbjct: 231 LREAGLAGRKRFIGFDSTPFLLEGLEKKEIDGLIVQDPDRMGYLAIKAVVAALRN 285 >UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDF0_9FIRM Length = 333 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 17/242 (7%) Query: 36 NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN 95 NP+ V + + ++ A GV+ I+ ++ D + + ED+ K+ + AP+ Sbjct: 61 NPWMVALTESMQQSADEYGVNY-IYTDAND-DMATHVANIEDMLAKDLDILVIAPMEDTG 118 Query: 96 LVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 L + A +KG+ ++ + + G V +D G + A I +K+ Sbjct: 119 LEAVLDEAAEKGVPVIL--------SARTTQGEYVTTVYSDQAWEGERCAELIGEKI--P 168 Query: 156 GGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKALDVATNVLQ-R 213 +V + G G +S R G + ++ +++V Q A++ R +A+D N+LQ + Sbjct: 169 DAKVVELRGIEGTSSVAGREKGFRDVMAEQYPDMEIVVEQTANFSRQEAMDAMANILQAK 228 Query: 214 NPN-IKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 P+ I A+YC ND MA+G QA+ +AG T + VVG DG EA ++V++G+M TV Sbjct: 229 GPDAIDAVYCHNDEMALGAVQAIKDAGLTPGEDIQVVGIDGQKEAWELVKSGEMLGTVQC 288 Query: 271 NP 272 +P Sbjct: 289 SP 290 >UniRef50_C9A2C8 Periplasmic ribose-binding protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A2C8_ENTGA Length = 352 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/278 (29%), Positives = 131/278 (47%), Gaps = 30/278 (10%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPS--EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN 95 +W MKKG ED AK LG ++ SPS + + ++ + KN GIA AP+ Sbjct: 49 YWNPMKKGAEDAAKELGYTLVTKTSPSAEPSKKEKHIGFIKEATAKNVAGIAIAPIEKKA 108 Query: 96 LVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG---AKGASFIIDKL 152 V P+ A K I ++ D D++N + A+V TDNV+ G K A+ + + Sbjct: 109 FVDPIKAAMDKDIPVITFD--ADLENPD----DRTAYVGTDNVSAGKELGKRAAEEMKEK 162 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKK-----ASQIKLVAS-----QPADWDRIK 202 G GG +AI+ + R G E F++ A K +A+ QP++ K Sbjct: 163 GITGGSIAIVCVDVAQPTMIDREKGLKEGFEEVYGTDAKNFKFLATIQDNDQPSE--SKK 220 Query: 203 ALDVATNVLQRNPNIKAIYC-ANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 L+ + N ++ ++ ++ +GV A+ + GK+GK+L G D K +E Sbjct: 221 QLE---GYISANKDLVTVFSLGSEGPDVGVMSAIESQGKSGKILHYGFDYTDTWLKGIED 277 Query: 262 GQMTATVAQNPADIGATGLKLMV---DAEKSGKVIPLD 296 G++TA V Q+ IG ++ +V D EK IP+D Sbjct: 278 GRITAIVDQDAYQIGYQVIENLVKAIDGEKIDATIPID 315 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 16/243 (6%) Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 P+ + I++EA + D + ++G Q EDL + I AP L Sbjct: 42 PWRIAETNSIKEEAAKHKKTYDFLITDAQGQTSKQFADIEDLIARQVDVIFLAPREYEGL 101 Query: 97 V--MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 + ARA K I+L ID + + G + +F+ +D +A G + ++ A Sbjct: 102 TPALEAARAAKIPIFL------IDREAAGRPGEHFVSFLGSDFIAQGRRVGEWLAK---A 152 Query: 155 EGGEVAIIE--GKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 G+ +I+E G AG++ R G A +K++A+Q AD+ R A+ V N++Q Sbjct: 153 TDGKASIVELTGTAGSSVAIDRAKGFRNAIATYPNMKIIATQTADFSRAAAVRVMENIIQ 212 Query: 213 -RNPNIKAIYCANDTMAMGVAQAVANAG-KTGKVLVVGT-DGIPEARKMVEAGQMTATVA 269 + +I A+Y ND MA+G QA+ +AG K GK ++VG+ DG A + + G++ +V Sbjct: 213 AKGSDITAVYAHNDEMALGAIQALKSAGMKPGKDVMVGSIDGQKAALEAIIRGELGVSVE 272 Query: 270 QNP 272 NP Sbjct: 273 SNP 275 >UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH93_9FIRM Length = 362 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 18/291 (6%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+++K +NPF + G A+ +G + + + + Q++L ED+ I Sbjct: 62 AMIVKNNTNPFMNGVLNGFSKAAEDIGFEAMLLSPQTADSNEDQVRLVEDMIQSGVDAIC 121 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 P+ S +V + +AW GI ++ + + D + G A T A + Sbjct: 122 IHPVDSNGIVPALEKAWDAGIPVLVQGTQANTDKIYGWYGTKYADEAT-------LIAEY 174 Query: 148 IIDKLGAEGGEVAII-EGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 + +KL +G V I +A NA E N F+K + L+ QP +++R ++ V Sbjct: 175 LAEKLDYKGNVVYITGPQQAQNAIDEI--NATHAVFEKYPDLNLIEEQPGNFNRATSMSV 232 Query: 207 ATNVLQR--NPNIKAIYCANDTMAMGVAQAVANAG-----KTGKVLVVGTDGIPEARKMV 259 N++Q+ +I + ND AMG A+ NAG + G + V G D +A + Sbjct: 233 MENLIQKYSEDDIDWVIGGNDECAMGAIAAMENAGWKLGFEDGGIGVSGIDCNKDASYAM 292 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA-PEFKLVDSILV 309 + G +T +V +P +G G +V+ G + P A P+F+ D +++ Sbjct: 293 QEGTLTVSVNPDPVSLGYIGAAFLVNYLNDGDLFPEYVAWPDFQTADDVVI 343 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 16/290 (5%) Query: 23 AAAEYAVV---LKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPSEGDFQ-SQLQLFED 77 AAAE V+ L+ LS F ++ +E + K V + I + S+ D Q SQL F Sbjct: 41 AAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNYDNVKLIINDAESQSDKQASQLDSF-- 98 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 + + +P+ + L V GI ++ + G + +V + N Sbjct: 99 -VAQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADV-------TGDQGQVWVGSSN 150 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 G ++ +KLG +G ++A++ G G + + R G K I++V Q + Sbjct: 151 ENGGEIEMKYVAEKLGGKG-KIAVLRGPLGAFAEQGRFAGYETVLKDYPDIEIVFDQTGN 209 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W R +A+ + N+L + AI C ND MA+G +AV AGK ++ + G D I +A Sbjct: 210 WQREEAMALIENLLTAGTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALD 269 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 ++AG++ AT Q+ G L + V A + V +D E D++ Sbjct: 270 SIKAGELDATCFQDAIGQGTNALDMAVKAARGETVERMDIPFELVTKDNV 319 >UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Proteobacteria RepID=A5FXE6_ACICJ Length = 328 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 14/284 (4%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A+ + +LSNPF+V +K +EA LG + G+ +QL L + ++ I Sbjct: 44 AIFVPSLSNPFFVAEEKFAAEEATKLGYGT--MVASHNGNAYTQLNLIKTAIARHVAAII 101 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 + + + V A K G+ + +D +I+ + KA V+ + +G F Sbjct: 102 LDNAGADSSISAVKLATKAGVPVFLIDREINAKGIAKA-----QIVSNNFQGAQLEGTEF 156 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 KL G + G + + + R G K S +K+VA Q ADW + K V Sbjct: 157 A--KLMGYKGTYVELTGLPSDTNAKVRSQGVASVLKHFSGMKMVAVQTADWSQSKGFQVT 214 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 +L+ +P+IK + NDTMAMG A+ A K V+V G DG P+ + GQ+ A Sbjct: 215 QTLLEAHPHIKGLIADNDTMAMGAEAALLAAHKP-NVIVTGFDGSPDVINSIRKGQIKAD 273 Query: 268 VAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 V Q I + +++A+K + K PE + ++ L+T+ Sbjct: 274 VLQ---PIATFSREAVIEADKYIRTGKTGK-PEKQELNCTLITK 313 >UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFL8_9FIRM Length = 312 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 19/280 (6%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 VV K+ S+ +W+ + G+E A LGV V I + +E D ++Q Q+ L K+ +A Sbjct: 46 VVTKSRSSEYWMSVCSGMEKAASDLGVKVIIMSPDTETDEKTQQQMIGSLLKKDIDALAV 105 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 +P++S N + +A +KGI +V+ D KI L+K ++ DN VG + A ++ Sbjct: 106 SPINSHNAKGYLKKAEEKGIQVVSYDTKI----LEKG----VPYIGIDNEKVGRELAQYM 157 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 ++ + G V II G +S +R G + K + IK+ ++ + + Sbjct: 158 AAQM-KKKGLVGIISGNLKQSSHASRLKGFRDYIDKNTDIKIAFTESGYSNLRMPEKEIS 216 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 +++ +P++ I+ + A+G+ + + + VL+ D +A V+ G++ A Sbjct: 217 RLMREHPDLNGIFATSAVTALGIMEYLGDR----PVLIATVDAQEDALDAVKKGKIGALA 272 Query: 269 AQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 Q +IG ++ +V+ +K GK K PE K++ + L Sbjct: 273 YQPGYEIGYETVRYIVN-QKEGK-----KQPEQKIIQADL 306 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 14/243 (5%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 L NP+W G+ A+ G+ V I S Q Q+ DL N+ + P+ Sbjct: 49 LQNPYWQSYAAGVRAGAEEAGIEVVIADQKSSQ--QEQVSGSLDLINQGISALIITPVQP 106 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 L + A + I +V D + G+ + ++ ++N G A +++KLG Sbjct: 107 SALPSTIDAAHGEKIPVVVADIGTE--------GDYDGYILSNNYEGGRLAAEHVVEKLG 158 Query: 154 AEGG--EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 G +V +IE AG+ GE R +G + + ++V+S + A ++L Sbjct: 159 GTPGPHQVGVIELHAGSVVGEERVSGFVDRLGEEENFEIVSSLDGNDTVDGGFTAAQDML 218 Query: 212 QRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVA 269 NP + IY AND A+G ++A+ AG + ++G DG A ++E G M+ TVA Sbjct: 219 SANPELDVIYAANDDSAVGASRAMETAGVSVANGFTLIGFDGSDPALDLIEQGVMSGTVA 278 Query: 270 QNP 272 Q+P Sbjct: 279 QDP 281 >UniRef50_Q0SII4 ABC ribose transporter, substrate-binding component n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SII4_RHOSR Length = 322 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 135/282 (47%), Gaps = 20/282 (7%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L SNPF++ + IE A V V + + D Q + + I Sbjct: 50 VTLNAASNPFFLAEGQAIETAAAEKRVEVSV--QYANADVAVQSDQIDTFIRQKVDSIIV 107 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 + S + + RA + I +V +D + G +A VT+DNV G + +++ Sbjct: 108 DAVDSDGIGPALLRATQANIPVVAVD-------VTAIGA--DATVTSDNVQAGREACTYL 158 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +++LG G +VAI++G A +A + R G EA I++VA+Q AD R KA++VA+ Sbjct: 159 VEQLGGSG-KVAIVDGAAVSAISD-RMQGCREALDAHPGIEVVATQRADLTRDKAMNVAS 216 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 +L NP++ + ND A+G++ A G KV+ V + ++ + AT Sbjct: 217 TILTANPDVDGFFGVNDPTAIGISLAAQQKGVDVKVVGVDG--AKQLTDLLGKSSIIATS 274 Query: 269 AQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 Q+PA +G +GL + V KV D AP L+ ++LVT Sbjct: 275 GQDPAQLGRSGLDIAVRLAGGEKV---DSAP--TLIPTVLVT 311 >UniRef50_B2JDH5 Periplasmic binding protein/LacI transcriptional regulator n=83 Tax=Proteobacteria RepID=B2JDH5_BURP8 Length = 321 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 21/281 (7%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 + + L+NP++V M+K + D A ++G +V + + + D Q+ ED+ K + Sbjct: 49 MTFQELNNPYFVTMQKALNDAAASIGATVVV--TDAHHDVSKQVSDVEDMLQKKIDILLV 106 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P S + + + + + A G V++FV + N G ++ Sbjct: 107 NPTDSTGI--------QSAVTSAKKAGAVVVAVDANANGPVDSFVGSKNFDAGQMSCEYL 158 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +G G EVAI++G E R G A K +K+V +Q +R AL V Sbjct: 159 AKAIGGSG-EVAILDGIPVVPILE-RVRGCKAALAKFPNVKVVDTQNGKQERATALSVTE 216 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA--GQMTA 266 N++Q +PN+K I+ ND +MG A+ ++GK K+ V DG PEA ++ + Sbjct: 217 NMIQAHPNLKGIFSVNDGGSMGALSAIESSGKDIKLTSV--DGAPEAITAIQKPNSKFIE 274 Query: 267 TVAQNPAD--IGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 T AQ P D A G+ L A+K G +P + KLVD Sbjct: 275 TSAQFPRDQIRLAIGVAL---AKKWGANVPKTIPVDVKLVD 312 >UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YA80_DICT6 Length = 338 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 13/309 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L L L+ S AV+ K++ +P+W +++ G++ AK LGV F Sbjct: 1 MRKILVAILIILFPLIFSIGYSKEIHVAVIGKSV-HPYWAEVELGVKQAAKDLGVKATFF 59 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 P + D +Q+ E GIA AP + + +A KGI ++ LD D Sbjct: 60 V-PQKEDIPAQISQMESFIAMGVDGIAIAPSDPTAIAPTIEKAMAKGIPVITLDT--DAP 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 K+ ++ TDN + G + D LG +GG+VAI G + R G + Sbjct: 117 QSKRL-----VYIGTDNYSAGKIAGMVMNDLLGIKGGKVAIGTGSLTAMNSLERIRGFMD 171 Query: 181 AFKKASQIKLVASQPA--DW-DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 +I +V ++PA D+ D +A+ +A L P+++ + A+AV Sbjct: 172 GIASNKRI-VVVTKPALCDFEDTGRAVTLAEQALLTYPDLRGFFGVYAFNGPAAAKAVKA 230 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 AGK G+VL+V D E ++++ G ++ATV Q P +G ++++ + G L + Sbjct: 231 AGKVGQVLIVCFDTTAEHMQLIKEGVISATVGQRPYMMGYKSVEVLTKMAQKGVDATLKE 290 Query: 298 APEFKLVDS 306 P +++D+ Sbjct: 291 LPANRIIDT 299 >UniRef50_C2AKV1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Actinomycetales RepID=C2AKV1_TSUPA Length = 336 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ KT +NPF+V +++ + +A G ++ A +GD + Q+ E+L ++ KGI Sbjct: 42 LITKTDTNPFFVKIREAAKAQADAKGANLVALAGKFDGDNEGQVAAIENLVSQGVKGILI 101 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 P SS ++ + +A G+ ++ LD + + V+A TDN G +++ Sbjct: 102 TPNSSTGILAAIKKARDAGVVVIALDTATEPADA------VDATFATDNTEAGRLQGAWV 155 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQPADWDRIKALDVA 207 L ++ +++G AG+ + R G + +A ++ + D+ KA Sbjct: 156 KGALAGAAPKLLMLDGTAGSTVSDFRHKGFLQGIGLTENAPEIAGTENTNGDQTKAQTAM 215 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 N+LQR P+ A+Y N+ A G QA AGK ++ + DG V+ G + AT Sbjct: 216 ENLLQRVPDANALYTINEPAAAGGYQAAKKAGKAAQLTIGSIDGSCAGVDNVKKGMIGAT 275 Query: 268 VAQNPADIGATGLKLMVDAEKSG 290 V Q PA + G+ +V K G Sbjct: 276 VLQFPAKMAQQGVDAVVAFAKDG 298 >UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D2PNL9_9ACTO Length = 335 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 17/202 (8%) Query: 90 PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 PL++V V +A+ +GI ++ LD K++ D F+ DNV +G + ++ Sbjct: 116 PLTAV-----VKKAYDQGIPVLVLDRKVEGDAYT-------GFIGGDNVQIGTEAGKYVA 163 Query: 150 DKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATN 209 +K+ GG V I+G AG R G K ++K+VA+ DW R K Sbjct: 164 EKVLPNGGNVVEIKGLAGATPQAERNQGFATGIKANPKVKVVATASGDWLREKGQAQMDA 223 Query: 210 VLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR---KMVEAGQMTA 266 +L+ NP I +Y ND MA G A G+ ++ +G D +P K VE G++TA Sbjct: 224 LLKANPKIDVVYAHNDPMAEGAYLAAKAVGREKEMKFIGIDALPIPSGGIKAVEQGRLTA 283 Query: 267 TVA--QNPADIGATGLKLMVDA 286 T N + A KL+VD Sbjct: 284 TFTYPTNGKEAIAAAKKLLVDC 305 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 5/267 (1%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 ++V +++GI+ A +V+I S + D QL EDL +K IA A + S Sbjct: 52 YFVAVREGIDKAAAE--NNVEITYSDAGWDASKQLSQVEDLISKKVDLIAIAAVDSNAAK 109 Query: 98 MPVARAWKKGIYLVNLDEKI-DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG 156 V A + I ++ I D +N + G + +V + V G LG +G Sbjct: 110 TAVRMANEANIPILAFTNAIGDKENGEYEG--LITYVGQNEVETGKLTGELAKSLLGEKG 167 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 G+V +IEG+ G + RR G EA ++V +Q ++W++ +AL + +++Q+N Sbjct: 168 GKVVLIEGRPGTSPQINRRKGVMEALDTNKNFEVVYTQTSNWEKEQALKIVEDLIQKNQT 227 Query: 217 IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIG 276 I I +D A+G A+ A K+LV+G G E V++G + T + + G Sbjct: 228 IDVIIAQDDNSAIGAGMALKEANLKDKILVIGLGGSTEGLNAVKSGLIDGTTYMSAVEEG 287 Query: 277 ATGLKLMVDAEKSGKVIPLDKAPEFKL 303 T + V KV P+ + + ++ Sbjct: 288 YTAITAAVKYLNGEKVEPVTQMKQVEV 314 >UniRef50_D2PTU2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PTU2_9ACTO Length = 361 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 2/153 (1%) Query: 131 AFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKL 190 + +T + V G + + +G GG +A+ +G A+ + R G + KK + +KL Sbjct: 150 SHITYNGVESGQQIGDALAQAIGGSGGIIAL-QGVLDTAAAKDRFAGLQASLKKNTGVKL 208 Query: 191 VASQPADWDRIKALDVATNVLQRN-PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGT 249 + Q A++ R +AL V +L ++ N+K I+ AND MA+G +A+ AG+ GKV VVG Sbjct: 209 LDQQAANFSRAEALAVTKTLLTKHGANVKGIWAANDDMALGALEALQQAGRAGKVAVVGI 268 Query: 250 DGIPEARKMVEAGQMTATVAQNPADIGATGLKL 282 D +P+A V+ G MTATV+ + G GL + Sbjct: 269 DAVPDAVTAVKNGTMTATVSSDGGWQGGIGLAI 301 >UniRef50_B0K232 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Thermoanaerobacterales RepID=B0K232_THEPX Length = 324 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 12/270 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + +V + +PFW ++K G D AK V+++ F +P + Q +LQ + G Sbjct: 37 HFYMVAQNSVDPFWKEVKMGAMDAAKRYNVAIE-FNAPKFNNIQEELQYLDIAILSKVDG 95 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I +S V + A+K+GI ++ ++ D + K+ +AF+ T++ +G + Sbjct: 96 IITHVSNSKEFVDLIEEAYKEGIPVITIEN--DAKDSKR-----QAFIGTNSFQLGEEAG 148 Query: 146 SFIIDKLGAEGGEVAII---EGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 +I + +AII + + + + NG +A K Q+K+V + + Sbjct: 149 KLMIQATKGKAN-IAIIVSNDYQLDTVNQNLKINGFLDAIKDYPQMKVVKVYTSKLGTLS 207 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A ++ +++ NI AIY + +G AQ + + K G + +VG + + ++ G Sbjct: 208 AEEITQSIISSKQNINAIYTTDSVDTIGTAQVIVDFNKVGDIAIVGYGDTADILRYIDKG 267 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + TV +P IG +K MV+ ++ V Sbjct: 268 IIYGTVMSDPYRIGYESVKSMVEIKEKNNV 297 >UniRef50_C1B1U9 Putative ABC transporter substrate-binding protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B1U9_RHOOB Length = 369 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 10/261 (3%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL-QLFEDLSNKNYKGIAFA 89 +++L+NP+ +G A++LG+ + + GD Q+ L QL L+ + Sbjct: 56 VRSLTNPYEAAWVQGSRAYAESLGIELKVIVY--GGDSQNALSQLQSVLAAGKTVLLNIN 113 Query: 90 PLSSVNLVMPVARAWKK--GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 P +S + + RA + G + + D+ + G ++V+ D V GA Sbjct: 114 PNTSAD-TPAIVRAVQNSGGCAVTQWSKPADL-HPWDVGNGWASYVSYDGVQQGADTGKA 171 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 ++D LG GG +A+ +G N + R G +A S + L+ QPAD+DR KA Sbjct: 172 LVDSLGGTGGVIAL-QGLLANDISQTRFQGFQQAMAGQSGVTLLDDQPADFDRNKAYTTT 230 Query: 208 TNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGKTGKV-LVVGTDGIPEARKMVEAGQMT 265 +L + + I+ A D+MA+G QAV AG+ G++ + D PE + G++ Sbjct: 231 QTLLNKYGDQVNGIWAATDSMALGALQAVREAGRAGEIKIASAADATPEGLGAIADGELL 290 Query: 266 ATVAQNPADIGATGLKLMVDA 286 +T +P GA GL + A Sbjct: 291 STYTTDPYFNGAMGLAICYQA 311 >UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8H8_ARTCA Length = 322 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 22/293 (7%) Query: 11 TLVGLMLSTSAFAAAEYA------VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 TL G S++A ++ E A VV+ L +P M ++ A GV ++I + S Sbjct: 20 TLTGCAGSSNATSSGEAAKTYNIGVVVLDLQDPDLAHMTDAMKKTADEKGVKLNI--TDS 77 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 + D S+L EDL + + PL R I L L + Sbjct: 78 KKDVGSELNQVEDLLTRQVDAVIMQPLDGDASQNAAKRVIAANIPLFILSTEF------A 131 Query: 125 AGGNV--EAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 G +V ++++ D+ G A ++ +KL GG + G G + + R+NG + Sbjct: 132 EGSDVGYKSYIGVDDTVAGQMQAEYL-NKLMPNGGNLVFAAGVYGASWTDRRKNGFDKTI 190 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPN--IKAIYCANDTMAMGVAQAVANAGK 240 + K+VA A R A + LQR P+ I A+ ND MA+G A A+A+AG+ Sbjct: 191 NE--NFKIVAEFQAKGSRDDAKRNMEDTLQRFPSGQIDAVVANNDEMAIGAASAIADAGR 248 Query: 241 TGKV-LVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 T + VVG DG A + +E G M+ATV Q+ A G ++++ D G V Sbjct: 249 TAEFKAVVGVDGTEPALQDIEGGTMSATVRQDSAGQGVKAVEVVTDFLNGGNV 301 >UniRef50_B5J7Y9 Putative uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J7Y9_9RHOB Length = 360 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 15/273 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG--- 85 V+++ L NP+ + G E + LG+ V + +S EG+ Q Q F DL + + Sbjct: 46 VMIRGLDNPYHANYVTGAEALGERLGLPVAVLSS--EGNSQKQ---FADLRAQIARTGGN 100 Query: 86 --IAFAPLSSVNLVMPVARAWKK-GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 + P ++V P+A+ + GIY VN K D +L+ V A + D V G Sbjct: 101 MVVNVDPNEGPDVV-PIAKILEDAGIYWVNWWNKPDQVSLEDYPHWV-AHIAFDAVDQGY 158 Query: 143 KGASFIIDKLGAEG-GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 AS + + G + I+G N + R NG +A ++ ++L+ + ADWD Sbjct: 159 YSASELFETFETPNKGTIIAIQGMLSNNAAIGRFNGLLKALEENPGVELLQWEAADWDTN 218 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +A + +L +P++ ++ AND MA+G A+ G+V+V G DG +A + Sbjct: 219 RAYESTKQLLAAHPDVDGVWAANDNMAVGAVAALKELDLDGQVMVSGVDGTLDALDAISE 278 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 G ++T Q+ GL + + A +G++ P Sbjct: 279 GTQSSTEFQDSRYQSQLGLTMAL-AAMNGELDP 310 >UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJT9_CLOCL Length = 330 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 18/295 (6%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 +ST +++L S+ +W ++K G E AK + ++I A GD Q L Sbjct: 32 ISTQNEKIKNISLILLNQSDDYWKNVKLGAETAAKEFDIKLNIVAPEDGGDITIQQNLIN 91 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + + P S LV PV A KGI ++ +D K++ + + TD Sbjct: 92 EAVAMKVDALLLVPSSFQELVEPVEAAVNKGIIVMTVDSKVNT-------AKIACCIATD 144 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEA-RRNGATEAFKKASQIKLVASQP 195 N++ G ++ L AI+ S E R G E K +I+++ Sbjct: 145 NLSAGKSAGEKLVS-LARMNSVAAIVGFDKKTGSNEFDRYKGIKEVTKDYKEIQVIDR-- 201 Query: 196 ADWDRIK----ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDG 251 W IK A +A ++ N +I I N ++GVA+A+ G GK+ VV DG Sbjct: 202 --WCDIKDSNGAERIAKELISNNEDISVIIALNYKASIGVARAIEKLGLKGKIKVVAFDG 259 Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 + K +E G + + V Q+P +G +K V + GK IP F ++D+ Sbjct: 260 DYQEVKYMEDGTIQSVVIQSPFSMGYLAVKNAV-LKLQGKSIPRYIESGFTVIDN 313 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 20/281 (7%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 L+ P+ V M + I A+ + D+ + + D Q+ E+ K + +P + Sbjct: 58 LAEPYRVRMDEDIRKAAEKV-PQFDVQFADAAKDNSKQVSDVENFMTKKVDLLMISPNEA 116 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 L V +A+ +GI +V LD K++ G ++ DNV +G + + + L Sbjct: 117 APLTDVVKKAYNEGIPVVVLDRKVE-------GEAFTTYIGADNVQIGRQAGEYFKNTLL 169 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR 213 +GG++ ++G +G+ R G E S+I++V + +W+R +L+ Sbjct: 170 PQGGKIVQLKGLSGSTPAAEREKGFMEGIA-GSKIEVVDTADGEWERSVGQQKMDALLKA 228 Query: 214 NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR---KMVEAGQMTATVAQ 270 +P+I+A+Y ND MA G A AG+ + VG DG+P K VE G+++AT Sbjct: 229 HPDIQAVYAQNDPMAEGAWLAAQAAGRK-DLKFVGIDGLPIESGGIKAVEQGRLSAT--- 284 Query: 271 NPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ TG + V+A + +I P+ + + + LVT+ Sbjct: 285 ---NLYPTGGEEAVEAARK-LLIDCQPVPKEQTLPTELVTR 321 >UniRef50_UPI0001C3221B ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3221B Length = 345 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 7/265 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED-LSNKNYK 84 + A + L+N F K+GIE+ A G SV F S+GD QL +D + + Sbjct: 46 QLAFFVPILANEFGAAYKRGIEETAAKRGASVQTF--DSQGDPARQLSQIQDAIVADRFD 103 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI--DMDNLKKAGGNVEAFVTTDNVAVGA 142 G VN+V V RA GI + +D I + D+L G + A V + G Sbjct: 104 GFVIYTDDGVNVVPGVDRAVDAGIEVTAIDTVIGTERDSLVPYDG-MTAMVGQTGASNGT 162 Query: 143 K-GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 K G + + +V ++ G A + R A + F+ I++V +Q A+++R Sbjct: 163 KIGEQVVAACAEQDPCKVLLMIGSAKYSIDRDRLEAAEKVFEGHPNIEVVGTQEANYERD 222 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 + V NVLQ P++ + D MA+G +A+AG+T ++ ++G + + A Sbjct: 223 RGRTVMQNVLQSTPDLDVVATWGDQMALGAIPVIASAGRTDQIKLIGNGASRPGVEAIRA 282 Query: 262 GQMTATVAQNPADIGATGLKLMVDA 286 G M ++ A P G L +DA Sbjct: 283 GTMESSYAFLPETAGRIATDLTLDA 307 >UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F472_THELT Length = 314 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 23/232 (9%) Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 PSE Q+ + L K + P S L +A++ GI+ + +D I+ + Sbjct: 63 EPSE-----QIAQVQALLAKGIDALVINPYESAPLTPICVQAFRDGIFTIIVDRGINSEE 117 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 ++ DN G +I +KLG +G V +IEG + E EA Sbjct: 118 YN-------VYIAGDNYMYGYLAGKYIAEKLGGKG-NVVVIEGIPSTINTER-----VEA 164 Query: 182 FKKASQ----IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 FKKA + +K++A QP W R KA ++ +L + PNI A++ +D M GV A+ Sbjct: 165 FKKALEPYPNVKIIAQQPGYWSREKAFEIMQTLLTKFPNIDAVWTGDDDMLHGVLLALKQ 224 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEK 288 AG+ +++VG KM+ G + P ++ +T + L V A K Sbjct: 225 AGRDKNIVLVGGACEKNIVKMIMDGHPLIGVDFTYPPNMISTAINLAVMALK 276 >UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AR66_RHILS Length = 333 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 13/214 (6%) Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 VD+ + +EG Q+ E L + K + + S + + + GI ++ L+ Sbjct: 62 VDLIVTNAEGKSAKQISDVESLMVQGMKVLMISAQDSAAIAPTIKQVLAAGIPVITLERS 121 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 +D+ V V N +G +I + L +G V I+G A R Sbjct: 122 LDIP--------VTLHVGPHNKPIGTLAGKYIAEALKGKGN-VVEIKGDPAVAPAVERHE 172 Query: 177 GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP--NIKAIYCANDTMAMGVAQA 234 G EA ++IK++A ADWD+ KAL + LQR P I+A+Y ND MA G +A Sbjct: 173 GFAEAIA-GTEIKVIAETHADWDQEKALKFMEDTLQRFPAGQIQAVYAHNDNMAFGALRA 231 Query: 235 VANAGKTGK-VLVVGTDGIPEARKMVEAGQMTAT 267 + AG+ + +L++G DG A + V G +TAT Sbjct: 232 IQAAGRDKEGILIIGIDGENAAIRAVAKGDLTAT 265 >UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribose) n=2 Tax=Agrobacterium RepID=B9K0T2_AGRVS Length = 329 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 10/288 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQ--SQLQLFEDLSNKNYKG 85 A++ ++ F++ M KG E A +G + +P DF +Q+ + + + K Sbjct: 36 ALIPGLTTDAFYITMHKGAEAAAAAIGAQIIFQGAP---DFNPVTQVPVLDAVIAKKPDA 92 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVE---AFVTTDNVAVGA 142 I AP + LV P+ +A GI ++ +D I + + G+ + +++ +DNV G Sbjct: 93 ILIAPTDTTQLVQPLKKAADAGIPMITVDTFIGTGDYQTGAGDGDFPLSYIASDNVLGGE 152 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 A + +G + G+V + K G ++ + R G K I ++ +Q D D K Sbjct: 153 IAARSLALAIG-DKGKVYVSNVKPGVSTTDQREQGFKSEMAKHPGITVLETQFNDNDANK 211 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A V RNP++ ++ AN +G A V AG++G + VV D +++G Sbjct: 212 AASQLQAVYARNPDLAGVFGANLFSGLGSANGVQQAGQSGTIKVVAFDAPGSVVDNLKSG 271 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + +AQ+PA+IG G+ + A +G+ IP F +++ VT Sbjct: 272 LIDFAIAQHPAEIGYYGV-ISAYAHLTGQSIPTKIGTGFTVINKSNVT 318 >UniRef50_Q1AZ05 Periplasmic sugar binding protein-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ05_RUBXD Length = 365 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 14/236 (5%) Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 G++ ++ ++ D Q Q+Q +L N+ I P S L + A GI ++++ Sbjct: 76 GLTEELVIESADVDVQGQIQQMRNLINQGVDAIIVNPNSVTGLNQVIKEASDAGIVVISV 135 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEA 173 D++I A G + V D + A +++++LG EG +V +I G AG+ + EA Sbjct: 136 DQEI------PAEGAIN--VVIDQAEWARRSAEWLVEQLGGEG-DVVVINGIAGHPANEA 186 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQ 233 R + E F + I+++A A+WD+ +N+L I ++ D MA GV Q Sbjct: 187 RYDAVKEVFSRNPGIEVIAEANANWDQATGQQKMSNILASETGIDGVWT-QDGMARGVLQ 245 Query: 234 AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ----NPADIGATGLKLMVD 285 A+ + +VVG + R E Q + NP +GA+GL++ V+ Sbjct: 246 AIVASDPERFPVVVGEARLGYMRLWHELRQQDEDFSSYGVINPPGVGASGLRVAVE 301 >UniRef50_C5ENT7 Predicted protein n=3 Tax=Clostridiales RepID=C5ENT7_9FIRM Length = 627 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 18/273 (6%) Query: 19 TSAFAAAEYAVVLKTLS--NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 T+A A+ EY + L T+ + WV + +G + EA+ LGVSV F SP+ D Q++ Sbjct: 348 TTAKASKEYRIALITMDSIDQHWVTLNEGAQKEAEALGVSV-TFMSPNTKDDAQQIECVN 406 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + Y+ I A + + A G+ +V +D ++D EA +TD Sbjct: 407 NAVAGGYEAIMVAANGPDAISSALKEAQSSGVKIVYVDSPANVD--------AEATFSTD 458 Query: 137 NVAVGAKGASFIIDKLGAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 N A G ++ L A G G + II A S R G AF + L+ + Sbjct: 459 NKAAGRTAGEEMLKALEAAGVTSGSIGIINVNAATDSCVMREEGFRSAF-EGKGFTLLET 517 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 Q + D K+ +A N + + + I+ N+ G A+ +GK G ++ VG D Sbjct: 518 QYGEGDAAKSQSIAENYITQ--GVVGIFGCNEGSTTGAGNAIKASGKDG-IIGVGFDKSD 574 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 +++ G + T+AQNP +G+ G++ V A Sbjct: 575 AILGLIDDGYLLCTMAQNPDVMGSKGVEACVKA 607 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 16/254 (6%) Query: 36 NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN 95 + WV + +G + A LGV+V F +P+ D Q++ + + K I A Sbjct: 76 DQHWVTLNEGAQKAAGELGVTVQ-FMAPNTKDDAQQIECVNNAVSAGAKAIIVAANGPDA 134 Query: 96 LVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 + + A G+ +V +D ++D EA +TDN A G ++ L A Sbjct: 135 ISSALKEAQSSGVKIVYVDSPANVD--------AEATFSTDNKAAGKTAGEEMLKALSAA 186 Query: 156 G---GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 G G + II A S R G AF+ ++ +Q + D K+ +A N + Sbjct: 187 GVTSGSIGIINVNAATDSCVMREEGFRSAFE-GKGFTMLETQYGEGDAAKSQSIAENYIT 245 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 + + I+ N+ G A+ +GK G ++ VG D ++ G + T+AQNP Sbjct: 246 QG--VVGIFGCNEGSTTGAGNAIKASGKDG-IIGVGFDKSDAIMGLIGDGYLLCTMAQNP 302 Query: 273 ADIGATGLKLMVDA 286 +G G+K V A Sbjct: 303 DVMGYEGVKAAVAA 316 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 12/232 (5%) Query: 42 MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVA 101 M +G+E +A+ LG D+ ++ D Q+Q+ E+L + I A + S ++ + Sbjct: 61 MTEGMEKKAEELGC--DLVMLDAQQDAQNQITQIENLIAQKVDVIIVAAVDSDAILPAIE 118 Query: 102 RAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAI 161 GI LV ++ + + +V D+V G ID++G EG V I Sbjct: 119 MCDDAGIPLVGVNMLFNTEEPYH-------YVGPDDVLAGELEMQNAIDEIGGEGN-VVI 170 Query: 162 IEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKA 219 +EG G ++ R G K +I ++A Q A+W R +AL + N L+ + I A Sbjct: 171 LEGPIGQSAQIQRLEGNQNILDKYEGKINVLADQTANWSREEALTLVENWLETFSGKIDA 230 Query: 220 IYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQN 271 I ND MA+G QA+ AG T K++V G D I + V+ G + TV Q+ Sbjct: 231 IVAHNDEMALGAIQALEAAGLTDKIVVTGVDAILDGCNAVKDGTLLGTVYQD 282 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 17/266 (6%) Query: 13 VGLMLSTSAFAAAEYAVVLKT--LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQS 70 + +S+ A +V T L+ PF V M++ AK LGV++ + S +G Sbjct: 11 MAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQVLDS--QGSSPK 68 Query: 71 QLQLFEDLSNKNYKGIAFAPLSSVNLVM-PVARAWKKGIYLVNLDEKIDMDNLKKAGGNV 129 Q+ E+ + +G +P + VN V V + +V LD + D V Sbjct: 69 QVADLENAITRGAQGFVVSP-NDVNAVSGAVTEIQDAKLPVVTLDRSVKTDK------KV 121 Query: 130 EAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQI 188 F +N G F+ + G ++ ++ G+ G++S R G ++ K S+ Sbjct: 122 PHF-GANNYKGGQAIGDFVKARF-PNGADIVLLTGQPGSSSNIERTQGIRDSLKAGGSKY 179 Query: 189 KLVASQPADWDRIKALDVATNVLQRNP-NIKAIYCANDTMAMGVAQAVANAG-KTGKVLV 246 +LVA Q +W R + + + +VL P + I AND MA+G +A+ + G K G+V+V Sbjct: 180 RLVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGLKPGEVMV 239 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNP 272 G D +PEA V G + AT Q P Sbjct: 240 TGFDAVPEALARVRDGWLAATADQRP 265 >UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Enterobacteriaceae RepID=B5XZZ5_KLEP3 Length = 311 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 10/252 (3%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 +++ +L NP++ KG ++A+ LG + + D + Q +L + K +GI Sbjct: 30 IMVNSLDNPYYASEAKGASEKAQALGYKTTVLSHGE--DVKKQNELIDTAIGKKVQGIIL 87 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 S V + +A K GI +V ++ +I +D++ +E +T +N G++ A+ Sbjct: 88 DNADSTASVAAIEKAKKAGIPVVLINREIPVDDVA-----LEQ-ITHNNFQAGSEVANVF 141 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 ++K+ AE G+ A + + + R + + + VA Q A I + Sbjct: 142 VEKM-AEKGKYAELTCNLADNNCVTRSKSFHQVIDQYPDMVSVAKQDAKGTLIDGKRIMD 200 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 ++LQ +P++K + C N +A+G A+ A ++ V+VVG DG + R V+AG + ATV Sbjct: 201 SILQAHPDVKGVICGNGPVALGAIAALKAANRS-DVIVVGIDGSNDERDAVKAGTLQATV 259 Query: 269 AQNPADIGATGL 280 I A G+ Sbjct: 260 MLQAQAIAAQGV 271 >UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridia RepID=A4XG54_CALS8 Length = 345 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 12/277 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 EY +V +W KG++ A GV I+ + D Q+ + + K G Sbjct: 49 EYYMVTFASGIEYWKGCFKGMKAAADLYGVKA-IYTGAPQFDVNQQVTVLRQVIAKKPAG 107 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I + L P+ A KKGI ++ D D+ K +V + T N GA A Sbjct: 108 ILVTCANPDALKAPIDEAIKKGIPVITFDA----DSPKSLRYSV---LETGNYNAGAMAA 160 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDRIKAL 204 ++ LG +G EV I A + E R+ G + KK IK+V+ + D KA Sbjct: 161 RYLGKLLGGKG-EVGI-STVAAQLNHEQRKQGFIDTLKKEFPGIKVVSIVNDENDSTKAA 218 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 +LQ +PNIK I+C + +GVA A+ A K GK+ +V D +++ G + Sbjct: 219 RGVAAMLQAHPNIKGIFCTDAPGGVGVATAIKEANKVGKIKIVSFDTDKGTLDLIKQGVI 278 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 A++AQ ++G G+ + K G V P+D +F Sbjct: 279 DASIAQGTWNMGFWGMTFLF-YLKHGIVNPVDNWKKF 314 >UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J484_9BACL Length = 329 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 8/248 (3%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 +++K +W K G E AK V ++ A +E D + Q++L E+ + I Sbjct: 44 MIVKMDRGDYWKTTKLGAEVAAKEFNVRLNFVAPENENDVEGQIRLMEEAIERRPDAIIL 103 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 A L R I ++++D ++ A V+ FV T+N G K A + Sbjct: 104 AASDYEALGQVTDRTSYYDIPVISMDSEV-------ASTKVKTFVGTNNYEAGQKAAERL 156 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +D G E+ II G + R G + + + +V Q D A + Sbjct: 157 VDLTGPVS-EIGIINFVKGARNANQREEGFLDYVARFPDVHVVDIQYCGSDEYLAYKLTA 215 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 ++L+R PN+ I + ++G +AV G GKV ++ D PE ++++ ++ A V Sbjct: 216 DMLKRFPNLNGIVSLSAESSIGAGRAVDELGYGGKVKMIAFDNPPEMLELLQEEKVQAMV 275 Query: 269 AQNPADIG 276 QNP + G Sbjct: 276 VQNPFNNG 283 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A++ + NPF+ +G + +A LG + + + D Q QL E + K I Sbjct: 30 AIITPSHDNPFFKAEAEGAKAKATELGYTT--LVASHDDDVNKQNQLIETAIARKAKAII 87 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 S + P+ +A GI +D +I+ + G V V+ +N GA Sbjct: 88 LDNAGSDATIGPLKKAKAAGIPAFLIDREIN-----ETGIAVSQIVS-NNYQGAQLGAEK 141 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + +G +G + ++ G+ + + R G + + S +K+VA Q A+W + +A + Sbjct: 142 FVTLMGGKGKYIELL-GRESDTNAHVRSQGYHDVIDEHSDMKMVAQQTANWSQTEAFNRM 200 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR-KMVEAGQMTA 266 ++LQ NP+I + NDTMA+G A+ AG+ V+VVG DG R ++ G + A Sbjct: 201 ESILQANPDITGVISGNDTMALGAEAALKAAGRN-DVVVVGFDGSDYVRDSIINNGNIKA 259 Query: 267 TVAQ 270 TV Q Sbjct: 260 TVLQ 263 >UniRef50_A9KMR5 Putative solute-binding component of ABC transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR5_CLOPH Length = 334 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 42/297 (14%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V++K L N +W ++ G E K LG V I + +E D + Q++ +D + I Sbjct: 38 VIVKVLGNQYWSVVQAGAEKAGKDLGCKVVIVGTAAESDIEGQVRYIQDAISAKADAIVV 97 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 APL L P++ +K G +V +D ++ ++ A + TDNV G A + Sbjct: 98 APLDRTALKNPISEQFKSGTPIVLIDSSVEGEDYSTA-------LMTDNVEAGRMAAKEM 150 Query: 149 IDKLGAEG------GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW---- 198 I +L A+G G +AI G G+ + R G E + + + PA W Sbjct: 151 IARLKAKGVAEDKEGTIAIQAGSTGSMAINDRLKGFNEYWGE--------NAPASWKVLN 202 Query: 199 --------DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTD 250 D KA+ + L N+ ++ N+ +G + A +T + ++G D Sbjct: 203 DDIKINDGDISKAVAFCQDFLTTYTNLIGVFGPNNGSTVGFVTGLTEAKRT-DLTMIGFD 261 Query: 251 GIPEARKMVEAGQM-TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 E +M+ G+ A++ Q +G G+K ++ GKV E K+VD+ Sbjct: 262 FSNEIEQMIRGGEYDVASMVQRQYMMGYDGVKTALELANGGKV-------ENKIVDT 311 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 28/298 (9%) Query: 13 VGLMLSTSAFAAA-----EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 +GL +A AA + V + +NPF+ K E K++G ++ + + D Sbjct: 24 IGLTGCATASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGA--EVLSQVANED 81 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 Q+Q + K I + + V RA GI + I +DN K Sbjct: 82 VQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPV------IGVDNQSK--- 132 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 N +TTDN G + DKLG +G ++AI+ G +A + R G + Sbjct: 133 NATVNITTDNKQAGEISCRSLADKLGGKG-KIAILNGTPVSAVDD-RVTGCKGILGQYPD 190 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 IK+VA Q + R AL +AT++L NP++ + ND A+GV A G + V++ Sbjct: 191 IKIVADQRGENSRDSALPIATDILTANPDLDGFFAINDPSAVGVQLAAEQKGAS--VVIT 248 Query: 248 GTDGIPEARKMVEAGQM-TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 DG A + AG + TAT AQ+PA LM A G I K P+ K++ Sbjct: 249 SVDGASSATDAIAAGGLITATAAQDPA-------ALMRQAIDLGISIVNGKEPDQKVI 299 >UniRef50_Q930Q0 ABC transporter, periplasmic solute-binding protein n=2 Tax=Sinorhizobium RepID=Q930Q0_RHIME Length = 321 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 70 SQLQLFEDLS-NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGN 128 +Q+ EDLS + + P +S L PV + K G ++ +D + ++ Sbjct: 79 AQVSALEDLSATRKLDALVILPFTSEELTGPVEQIKKNGTFISVVDRGLTDPTIQ----- 133 Query: 129 VEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQI 188 + +V DN+AVGA A ++ DKLG +G E+ ++ G E R G ++ K + I Sbjct: 134 -DLYVAGDNIAVGANTARWLSDKLGGQG-EIVVLRGIPTVIDDE-RIKGFSDVIDK-TNI 189 Query: 189 KLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVG 248 K++ Q A+W++ +A + + L + P I A++ +D M +GV +AV AG+ +G Sbjct: 190 KILDIQYANWNQDEAFKLMQDYLAKYPKIDAVWANDDDMLLGVIEAVDRAGRKDIKYALG 249 Query: 249 TDGIPEARKMVEAGQMTATVA 269 +G+ + +MV+ G V+ Sbjct: 250 GNGMKQVIEMVKEGNERTPVS 270 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 17/249 (6%) Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 V++ + E + Q+ E+L + + +P S L V +A I + LD Sbjct: 65 DVELIITDGEDRTEKQVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDR 124 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG---GEVAIIEGKAGNASGE 172 ++ D + FV DN +G + ++ LG +G G + I G G Sbjct: 125 NVETDQYTQ-------FVGGDNKLIGRAAGEYAVELLGGKGKAQGNIVEIWGGMGTQPAH 177 Query: 173 ARRNGATEAFKKASQIK-LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 R +G E K IK L+ Q DW + +A ++ L+ N I +Y ND MA G Sbjct: 178 DRHDGFHEFTDKEPGIKNLLDKQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGA 237 Query: 232 AQAVANAGKTGKVLVVGTDGIP-EARKMVEAGQMTATVAQNPADIGATGLKLMV---DAE 287 A +AG+ ++ +G D +P E V G++TAT A GA GL+ V E Sbjct: 238 YLAAKDAGREKEIKFIGIDALPNEGVTWVSNGELTATFLY--ATPGAEGLRQAVKFLKGE 295 Query: 288 KSGKVIPLD 296 K K + LD Sbjct: 296 KVEKTVTLD 304 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 20/257 (7%) Query: 25 AEYAVVLKTLSNP--FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 ++Y + L+N + + ++DEA+ G + + ++ + Q+ EDL +N Sbjct: 87 SDYLIGYSQLANTGTYRIAETNSMKDEAEKRGFK--LIVTDAQDNTAKQVSDVEDLIAQN 144 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK--AGGNVEAFVTTDNVAV 140 + +P L + A + + + I +D L K AG + ++ TD V Sbjct: 145 IDLLILSPREFEGLETALQTAKENSVPV------ILVDRLAKGEAGVDYVTYIATDFVWE 198 Query: 141 GAKGASFIIDKLGAEGGEVAIIE--GKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G ++ DK G G IIE G G++S + R G + +K++ASQ ++ Sbjct: 199 GQAAGEWLKDKTG---GTCNIIELTGTVGSSSAQDRATGFAGVVDQNEGMKIIASQTGNF 255 Query: 199 DRIKALDVATNVLQ-RNPNIKAIYCANDTMAMGVAQAVANAG--KTGKVLVVGTDGIPEA 255 +R + V N+LQ + A++C ND MA+G QA+ AG +LV+G DG ++ Sbjct: 256 ERSEGQKVMENLLQAHGGEVDAVFCHNDQMALGAVQAIKAAGYKPNEDILVIGIDGEMDS 315 Query: 256 RKMVEAGQMTATVAQNP 272 K V AG+M+ATV +P Sbjct: 316 FKSVIAGEMSATVVSSP 332 >UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI72_RHISN Length = 367 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 11/242 (4%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLG----VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 L T + ++ + G+++E G + + + A S+ Q++ E N I Sbjct: 76 LPTAMDTYYQRVLAGVKEEIDKRGGAEAIELLVQAPSSQSATDDQIRAMEAWINDGIDAI 135 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 A A + L+ + RA + GI + + DN V D G A Sbjct: 136 AVALYNEGALLPSIRRATEAGIPVFLFNSPF-ADNPYYVSD-----VGYDQSDGGRAQAQ 189 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +I+D G + ++ I+EG G + + R G E K K+VA QPA W R + L V Sbjct: 190 WIVDTYGDKEVKIGILEGLPGPHTSQ-RMKGFNEIISKHPNFKIVAQQPAGWVRAQGLSV 248 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N+ NP+I+ + D MA+G QA+ G GKV +VG + + EA + G +A Sbjct: 249 TENMFTANPDIEVLVALYDEMALGGLQALKAKGLNGKVAIVGYENMKEANAAILTGDFSA 308 Query: 267 TV 268 TV Sbjct: 309 TV 310 >UniRef50_B9KPX1 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B9KPX1_RHOSK Length = 321 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 22/228 (9%) Query: 76 EDL-SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 ED+ + +N + P S L PV + GI++ +D + ++ ++ + +V Sbjct: 85 EDMVATRNISALVVLPFESEPLTSPVQAVKEAGIWVTVVDRGLSVEGIE------DLYVA 138 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA---SQIKLV 191 DN G + L + G ++ ++ G E EAF A S I+++ Sbjct: 139 GDNPGFGRVAGEYFAQHLES-GKKIVVLRGIPTTLDNER-----VEAFTAAIDGSGIEVL 192 Query: 192 ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDG 251 Q +W+R A +V + L + P I A++ A+D MA+G +A+A AG+T ++ V+G G Sbjct: 193 DMQHGNWNRDDAFNVMQDFLSKYPQIDAVWAADDDMAIGAMEAIAQAGRTEEMWVMGGAG 252 Query: 252 IPEARKMVEAG--QMTATVAQNPADIGA----TGLKLMVDAEKSGKVI 293 + E + + G Q+ A V PA I T LKL+ SG+ I Sbjct: 253 MKEIIRRIADGDPQLPANVTYPPAQISTAIELTALKLVSSTPVSGRFI 300 >UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Proteobacteria RepID=A5G0N2_ACICJ Length = 345 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 12/242 (4%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 +NPF K + D AK V I+ + + + Q+ E++ N+ + + APL S Sbjct: 67 ANPFRAGETKSVRDAAKAFHVRRLIYTN-AHSNQSRQVADVENMINQGAQALIIAPLDST 125 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG- 153 L A+A K I ++ LD + AG +++ K +L Sbjct: 126 GLQPAFAQAAAKHIPILTLDRRT-------AGSKCSDYLSFLGSNFYFKQGEIDARELAK 178 Query: 154 AEGGE--VAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 A GG VA I+G GN+ AR G K +K+V Q +W A V + +L Sbjct: 179 ATGGHAMVAEIQGAYGNSVEVARTKGFAAGLKAYPGMKIVTEQTGNWFTTDAQKVMSQIL 238 Query: 212 QRNPNIKAIYCANDTMAMGVAQAVANAG-KTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 +PN+ A+Y DTMA G A+ +AG K G+V +V DG + + + G + A Sbjct: 239 LAHPNVNAVYAQADTMAFGAITALRDAGKKPGQVKIVSIDGTRQGVQDIVDGWIYADDET 298 Query: 271 NP 272 NP Sbjct: 299 NP 300 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 11/251 (4%) Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 +E+EAK L D+ ++GD Q +L + I P+ ++ A Sbjct: 55 MENEAKNLP-DTDLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIAND 113 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 GI + I ++N K + A+V +D++ G A + + +L +G V I++G+ Sbjct: 114 SGIPI------ISVNNFLKNQDDAAAYVGSDSITSGIMEAEYAVKQLNGKGN-VVILKGE 166 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 + + R G + + +IK++ Q DW R + + N ++ AI ND Sbjct: 167 PNHETAIKRTEGFKQVLQNYPEIKIIDEQYGDWKRTLGMQITENWIKNGTKFDAILANND 226 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL--- 282 MA+G A+ V V G D P+A K+++ G + TV QN A G+ +K Sbjct: 227 EMAIGAIMALKENNLINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYK 286 Query: 283 MVDAEKSGKVI 293 +V EK K I Sbjct: 287 LVKGEKINKKI 297 >UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQW7_9CLOT Length = 354 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 8/253 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 AV+ K+L +W ++ G + G ++D + ++ D + Q++L ED + I Sbjct: 66 AVIPKSLLFDYWQYVRIGAQSAGLDEGYAIDFQGTRTDTDLEGQVKLVEDFIQRGVSAIV 125 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 +P++ +V + +A GI ++ +D K++ D + V+T++ A G A Sbjct: 126 ISPVNPDGMVPVLQQAEDAGIPVIIMDGKLNADFPRST-------VSTNDEAAGKFAAEK 178 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 + + G GG AI+ G R G ++ K++ + DR + ++ Sbjct: 179 LKELAGDAGGTFAIVSAVPGAVQEGGREKGFSDELGTYPNYKIIGTYYGKGDRNQTYNIT 238 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTAT 267 ++L NP+I Y N+ + GV V G + + V D E + G + Sbjct: 239 QDILTSNPDITGFYTVNEGSSAGVTLGV-REGDLKEKIFVAFDPSTEVLDAIRDGYVDGA 297 Query: 268 VAQNPADIGATGL 280 VAQNP IG T + Sbjct: 298 VAQNPYLIGRTAV 310 >UniRef50_UPI0001C31E06 ribose ABC transporter, substrate binding protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E06 Length = 340 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 22/262 (8%) Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 PF+ + +G + +A + DI S SE D Q+ ++ + G+ +P+ L Sbjct: 61 PFFNRIGEGAKAQATVRRLDFDI--STSEIDPGKQIDSIDNAVAQQPDGLIVSPIDGSAL 118 Query: 97 VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG 156 V + A + G+ ++ L D L + G + +FV +D +G A++I D+LG +G Sbjct: 119 VPTIKGAVEDGVPVILL-----ADGLSEDVGQL-SFVGSDFAEIGRLKATYIADRLG-DG 171 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLV------ASQPADWDRIKALDVATNV 210 G VA++ G G + E + A E F++ I++V A P + L N+ Sbjct: 172 GTVAMVNGTRGMSFVEEQGEAAREVFEERG-IEIVDDVYTKAITPDE-----GLTATQNI 225 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAG-KTGKVLVVGTDGIPEARKMVEAGQMTATVA 269 L R+ ++ AIY + D A+G +A+A GK++VVGTD A V AG M TV+ Sbjct: 226 LTRHSDVGAIYYSGDDGALGGIRAIAARNIAPGKIVVVGTDANEGALAAVRAGTMALTVS 285 Query: 270 QNPADIGATGLKLMVDAEKSGK 291 Q + G + +M D ++GK Sbjct: 286 QCAYEQGGIAIDVMADYLETGK 307 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 20/257 (7%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWV-DMKKGIEDEAKTL-GVSVDIF 60 KY+K+ + L L+ A + + + S+ W M I EA GVSV+I Sbjct: 6 KYMKWITVLFCLLGLAACRQDAPRFRIGVAQCSDDSWRHKMNDEILREAMFYDGVSVEIR 65 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMP----VARAWKKGIYLVNLDEK 116 ++ + Q+ ED+ KG+ +S+ N P V A++KGI ++ +D K Sbjct: 66 SAADDNRKQA-----EDVHYFIDKGVDLLIISA-NEAAPMTPIVEEAYQKGIPVILVDRK 119 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 I D A++ DN +G ++I L +G V + G G+ R Sbjct: 120 ILSDKYT-------AYIGADNYEIGRAVGNYIASSLKGKGNVVELT-GLGGSTPAMERHQ 171 Query: 177 GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVA 236 G A IKL+ A W+R A ++L+R+P I A+Y ND +A G QA Sbjct: 172 GFMAAISNYPDIKLIDKADAAWEREPAEVEMDSMLRRHPKIDAVYAHNDRIAPGAYQAAK 231 Query: 237 NAGKTGKVLVVGTDGIP 253 AG+ +++ VG D +P Sbjct: 232 KAGREKEMIFVGIDALP 248 >UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTB0_9CLOT Length = 358 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 11/231 (4%) Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 ++ EA++ G + S +E D Q+ EDL ++ + AP+ + +MP A K Sbjct: 92 MQKEAESRGY--EFVMSNAELDTAKQISDVEDLLTQDLDFLFIAPID-MEAIMPAIEAAK 148 Query: 106 -KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEG 164 KG+ + LD + + G + + ++ + G A ++ + GA+ ++ I G Sbjct: 149 AKGVPTILLDREAN----GTPGVDYICTILSNYIWQGEACADWLSENGGADSYKIVQITG 204 Query: 165 KAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRN-PNIKAIYCA 223 K G + R+ G KK +++VA+Q +W R +A V N++Q + +YC Sbjct: 205 KVGGSDVRDRQAGFETGVKKYENMEIVATQSGEWSRTEAQKVMQNIIQSTGGDFNVVYCH 264 Query: 224 NDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 ND MA+GV A+ AG V V+ DG EA + + AG+M NP Sbjct: 265 NDEMALGVVLALKAAGMNPGTDVKVIAIDGQAEAVEAIIAGEMNCIATCNP 315 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 18/272 (6%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 A + + + FW G E +AK G + +GD + Q+ + K I Sbjct: 44 AFSIPEMFSTFWEACWYGFEKQAKEYGWEATLL--DPQGDLELQISQLQSQVTKGVDAIG 101 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP+ + + + + G+ + +D ++ G V + + TDNV G A Sbjct: 102 VAPIENEAIGPALTTVNEAGVPVFCVD--------RRGEGEVVSTLETDNVKAGEAMAEQ 153 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA-DWDRIKALDV 206 ++ G E +V II+G + R G +K I +V A ++ AL Sbjct: 154 LVKDYG-EDVDVLIIQGVLSDTPTLDRTQGVKNVLEKYENITIVGEPSAGEYSNEAALAT 212 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK------VLVVGTDGIPEARKMVE 260 N L+ NP++ I+ D + G+ A+ AGKTGK V + DG E K++E Sbjct: 213 TKNFLETNPDLDVIFTCTDALVPGIVAALKEAGKTGKVGEENHVGIYSVDGAGEVLKLIE 272 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 G + T +Q P G +K M GKV Sbjct: 273 DGTVDGTFSQYPIQFGIDTVKSMKTYLDGGKV 304 >UniRef50_C0CHG6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CHG6_9FIRM Length = 331 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 23/276 (8%) Query: 30 VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFA 89 V+ + + F+ ++ GIE +AK LG+ + +E D +DL+ + + IA + Sbjct: 57 VVGSFEHVFYQTIRDGIESKAKELGMEA--IVTDAELDPNIATNKVQDLTAQGCEAIALS 114 Query: 90 PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 + + + A +G+ + D D + + FV TDN G G ++ Sbjct: 115 CNDAAGVKPAIENADAEGVAMFTFDCSTDSEAIN-------CFVGTDNYKGGQLGGQELL 167 Query: 150 DKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATN 209 K +G V II ++ + R+NGA + K + +V D KA ++ N Sbjct: 168 -KYSEDGDTVGIICYPTASSCLD-RQNGALDVLKDEDRT-VVYDNDYQGDANKAQEIMEN 224 Query: 210 VLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ-----M 264 +L NP++ A++C D A G A+ AG K ++G DG PEA++ + + Sbjct: 225 MLTANPDMAAVFCVGDPAATGALAAIKAAGSDCK--IIGFDGNPEAKEAISDTEGNGKWW 282 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKV----IPLD 296 + +AQNP IG T ++ M GKV IP+D Sbjct: 283 VSEIAQNPTLIGETIVEQMQKYLDEGKVDAAEIPID 318 >UniRef50_B1G3A1 Periplasmic sugar binding protein-like protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G3A1_9BURK Length = 339 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 10/181 (5%) Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 VT D+ G + A +I+ +L +G V +++G G+ + EAR+ A + F K IK+V Sbjct: 127 VTVDHYKWGQRYAEWIVQQLNGKG-NVVVLDGIPGHPAAEARKKAALDTFAKYPGIKVVW 185 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDG- 251 S +WD KA V V+ P I A++ D MA+GV +A NA + +V V+ + Sbjct: 186 SGYGEWDEAKAQAVMATVIAAQPKIDAVFT-EDAMALGVLRAFENANR--RVAVMTGEAQ 242 Query: 252 ---IPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSGKVIPL-DKAPEFKLVDS 306 + E +K +AG M V NP DI T L + V + K+ PL D F + + Sbjct: 243 KGFLQEWKKQRDAGNPMKVFVQVNPPDISRTALGIAVRLAQGHKLKPLPDNTYYFPITKT 302 Query: 307 I 307 + Sbjct: 303 V 303 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 15/267 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V L T + F+ ++K I+++A+ G + D QL +D + I Sbjct: 58 VSLLTREHVFYNLIEKAIQEKAQ--GYKFKPIIMDASQDSNKQLAQVQDFITQKVDAIVL 115 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 AP +S + V A K GI + +D KA G+V++ V TDN A G A + Sbjct: 116 APTASAGIAPAVDLAKKAGIPVFTID--------IKAEGDVKSHVATDNYAGGKLAAKYA 167 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 +K+ G+VAII + + R G +A + IK+V + KA ++ Sbjct: 168 AEKVLNGKGKVAIITYSEVQSCVD-REKGFKDALAEYPNIKVVDVENCSGSAEKAANLTQ 226 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA-RKMVEAGQMTAT 267 ++L + P++ I+ D A+G + AG+ V V+G DG PEA +++ G A Sbjct: 227 DILLKFPDLDLIFAVGDPFAVGAVSTIKAAGRN--VKVIGFDGNPEAIQEIKNHGLWVAD 284 Query: 268 VAQNPADIGATGLKLMVDAEKSGKVIP 294 V Q+P IG + L+ D +GK +P Sbjct: 285 VVQHPDQIGGKVIDLIADYF-NGKSVP 310 >UniRef50_A1WMZ2 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Bacteria RepID=A1WMZ2_VEREI Length = 330 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 17/261 (6%) Query: 38 FWVD-MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 FW + KK +E L V + + S G Q+ QL + L+ + P S L Sbjct: 58 FWANKAKKDLEQAHPGLQV---VIKTASGGPEQAN-QLQDMLTANKIGALVIFPFESAAL 113 Query: 97 VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG 156 PVA+ KG+Y++ +D + + + +A+++ DN A G A F+ LG +G Sbjct: 114 TKPVAQVKAKGVYVLVVDRGLTDPSAQ------DAYLSYDNTAFGKIPAEFMAKTLGGKG 167 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 +V + G A E R +G K +IKL+ ++ A+W+R A V + L R + Sbjct: 168 -QVVALRGIATTLDNE-RMDGFNAVLKNNPEIKLLDAKYANWNRDDAFKVMQDYLTRFAH 225 Query: 217 IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ---MTATVAQNPA 273 I A++ A+D MA+GV +A+ A + LV G G K + G + A V+ +P Sbjct: 226 IDAVWAADDDMAVGVLKAIEQAKRKDIKLVFGGGGSKGMIKALMDGSNPVIQANVSFSPK 285 Query: 274 DIGATGLKLMVDAEKSGKVIP 294 I +KL +A G +P Sbjct: 286 FI-YEAIKLTAEARLKGDKLP 305 >UniRef50_C7IGF5 ABC-type sugar transport system periplasmic component-like protein n=2 Tax=Clostridium RepID=C7IGF5_9CLOT Length = 331 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 34/276 (12%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 A + + S+ F + ++DEAK + +D+F + D ++ + E+ Y + Sbjct: 45 AYIARAQSDSFAAWLANAVKDEAKKYPDIKLDVFDGQANDDTENSM--IENAITNKYDLV 102 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKI---------DMDNLKKAGGNVEAFVTTDN 137 P + V + K GI+ + + +I D + ++AG N A + + Sbjct: 103 IVQPNNGEAQRPYVEKVVKAGIHAITTNARISGIEGASSVDANPYEQAGVNARAAI--EQ 160 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG-ATEAFKKASQIKLVASQPA 196 + AK V +++G +GN + RR E F+K +K+V Q A Sbjct: 161 IPQNAK---------------VVVLDGPSGNFHADERRKSWQKEFFEKRPDVKIVGEQIA 205 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W++ +A+ + +Q N I A+ ND MA G + V + K +L G DG EA Sbjct: 206 NWNKDEAMKYMEDWIQSNDKIDAVISMNDNMAAGAIEVVKDNPKFKNMLAYGVDGTAEAL 265 Query: 257 KMVEAGQMTATVAQNPADIGA----TGLKLMVDAEK 288 +++ G+MT+T Q+ D+ +G KL+ EK Sbjct: 266 LLIQEGKMTSTCMQSAYDLATKLLESGNKLLTGGEK 301 >UniRef50_C0C383 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C383_9CLOT Length = 336 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 125/251 (49%), Gaps = 14/251 (5%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 + NP+++ ++ + ++ G + I P+ D +Q +++ + + P+ Sbjct: 61 MQNPYFITLEGATREAVESGGYRM-ITKDPAS-DAAAQAAQIQEMIAEGIDAVFLCPVDW 118 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 + + G+ ++N+D ++ K V+A++ +DN G +I+K Sbjct: 119 EEITDSLKALKDAGVRIINVDSQV------KEMEYVDAYIGSDNHNAGFICGEDLIEKR- 171 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ-IKLVASQPADWDRIKALDVATNVLQ 212 +GG++AI+E N+ + R G EA A + ++VA + + +AL+ A +L+ Sbjct: 172 PDGGKIAILECPTQNSIND-RITGFEEAIADAEKGFEVVAREDTGGEFDRALEAAEKILK 230 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK-MVEAG-QMTATVAQ 270 NP+I AI C ND +A+G AV N K V++ G DG P+ +K +AG Q+ T AQ Sbjct: 231 ENPDITAIMCGNDQIAVGAMTAV-NLAKMEDVIIYGVDGSPDIKKEFKKAGCQIAGTAAQ 289 Query: 271 NPADIGATGLK 281 +P ++G T K Sbjct: 290 SPINMGKTAAK 300 >UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSY2_BACS4 Length = 314 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 15/230 (6%) Query: 47 EDEAKTL--GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVA-RA 103 ED+AK L ++D + + + +Q+ EDL + I P+ S + + P+A + Sbjct: 50 EDQAKALVEDGTIDDYIFTTADNPSAQVNNVEDLIAQGVDAIVMLPIES-DALSPIALQV 108 Query: 104 WKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIE 163 + GI LV +D ++ D V DN G + +++LG G V I Sbjct: 109 EEAGIPLVIVDRELTNDAAT-------VVVKGDNYGAGVNAGEYFMEQLGGNGKVVEI-- 159 Query: 164 GKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCA 223 N+ + R +G EA + S I++VASQ ++ +L V N+L P I A+Y Sbjct: 160 AGPSNSVTQQRSDGFREAIE-GSDIEIVASQSGEFSTETSLQVMENILTSQPEIDAVYTQ 218 Query: 224 NDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV-EAGQMTATVAQNP 272 +D MA+GV QA+ A +T + G G + +++ + G +TAT +P Sbjct: 219 DDGMALGVLQAINEANRTDIQFITGVAGSKDVYEIIMDDGLITATFLYSP 268 >UniRef50_C0D9P1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9P1_9CLOT Length = 378 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 16/247 (6%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASP----SEGDFQSQLQLFEDLSNKNYKGIAFAP 90 +NPFW +K G+ D L S + +P SE D ++ E L + GI P Sbjct: 97 NNPFWDLIKAGLNDVTNYLA-SYNCTVTPVDMGSEADGKTIADYIETLELDDPAGIVCPP 155 Query: 91 LSSVNLVMPVARAWKKGIYLVN-LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 ++ + RA G+ + L E + + + FV +D VA GA A Sbjct: 156 MADGTEAY-IDRAVSDGVTVATYLSESTNQTDTRIC------FVGSDAVAGGATAAQMTA 208 Query: 150 DKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKALDVAT 208 D G +G V +I G E RR G + + A + L+ A + D A Sbjct: 209 DYTGGKG-TVGVITGYLTMNQHEERRKGFNDKLAELAPDLTLLEPVEAHDSATETYDAAV 267 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 +++ P++K IYC G AQAV + GKTG++ VV D +P+ + V G++ V Sbjct: 268 DLITAYPDLKVIYCTAGG-PYGAAQAVKDQGKTGEIGVVCFDWVPDNLQYVATGEIIGAV 326 Query: 269 AQNPADI 275 +Q+P ++ Sbjct: 327 SQDPENM 333 >UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TB6_SOLUE Length = 323 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 11/200 (5%) Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 V + S ++ D Q+ E + + AP L + +A + I ++ L+ Sbjct: 60 VKLVISDAQQDNSKQVAQVETFIRQKPDLLIVAPNERAALTAVMGQAMEAKIPVICLERD 119 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII----DKLGAEGGEVAIIEGKAGNASGE 172 I N +++ +DNVA+G FI+ K G G V + G G Sbjct: 120 ILQPNYT-------SYIHSDNVAIGRLAGQFIVGHLTKKYGKPAGNVVAMRGLLGVEGEI 172 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R GA E K +IK+VA ADW + KA D T VL+ P I +Y ND MA+G Sbjct: 173 NRDRGAKEILDKYPEIKIVADPVADWIQAKAKDRMTEVLRAQPKIDVVYGHNDPMAIGAY 232 Query: 233 QAVANAGKTGKVLVVGTDGI 252 G+ +++ VG DG+ Sbjct: 233 LGAKELGREKEMIFVGVDGL 252 >UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional regulator n=102 Tax=Proteobacteria RepID=A1WJI7_VEREI Length = 358 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 11/207 (5%) Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 D +Q FE + + Y GI F P+ V++A + I +V + +++ D L Sbjct: 95 DALTQNNQFETMITQKYDGILFVPIDLQAGADAVSKAAEANIPVVGSNGRVNSDKLL--- 151 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS 186 ++V +++V GA A ++D +G +G V I+EG G + RR G K Sbjct: 152 ----SYVGSNDVIAGAMQAQAVVDAMGGKG-NVVILEGPIGQSGQVERRQGNLSVLAKYP 206 Query: 187 QIKLVASQPADWDRIKALDVATNVLQRNP-NIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 +K++ + A+W R +AL + N L + I I ND MA+G +AV G K + Sbjct: 207 NVKVLEMKTANWSRAEALSLTENWLTAHAGKINGIIGQNDEMALGAIEAVKAKGLDPKTI 266 Query: 246 -VVGTDGIPEARKMVEAGQMTATVAQN 271 G DG+ +A + V+AG M A+V Q+ Sbjct: 267 PTAGIDGVSDAVRAVKAGIM-ASVLQD 292 >UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderiales RepID=Q221W3_RHOFD Length = 331 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 12/259 (4%) Query: 30 VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFA 89 V+ ++ PF+ D G + A LGV + P +Q+++ EDL +K GIA + Sbjct: 53 VIPKVAVPFFDDCNNGAKAAADKLGVQYQ-WVVPQNTQGSTQVRILEDLISKKVDGIAIS 111 Query: 90 PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 ++ + +A GI +V D A ++ T N A G + Sbjct: 112 VNEPKSVEAAIKKAVASGIKVVTFDSD-------SANSGRSMYIGTINSAAGETMGESMA 164 Query: 150 DKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATN 209 + EG EVAI+ G+ G A+ R G ++ K +IK+VA++ + D KA+ + Sbjct: 165 KAIDGEG-EVAILTGQLGAANLNERITGIKKSLSKYPKIKVVATEGTEDDLAKAVSTTES 223 Query: 210 VLQRNPNIKAIYCANDTMAMGVAQAVAN---AGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 + + +P +K I+ + V++ +A K G V V D +P+ K V+ G + Sbjct: 224 LFRGHPALKGIFGVSQVGGPAVSKVMATKEFGSKKGAVKVFAFDDLPDTVKGVKEGYIQG 283 Query: 267 TVAQNPADIGATGLKLMVD 285 + Q P +G ++ +VD Sbjct: 284 IMVQRPVTMGKLAVEHLVD 302 >UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J068_9BACL Length = 330 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 14/278 (5%) Query: 10 GTLVGLMLSTSAFAAAEYAVVL--KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 G++V + A Y +VL + +P+W ++KG + A+ G+ ++ F P + Sbjct: 36 GSIVKELQGQPASGEPRYHIVLIEQERYHPYWEMVEKGAAEAAEKYGIDIE-FTGPVRNN 94 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 + QL L E I L+ + +A ++GI +V +D D N ++ Sbjct: 95 MEEQLNLLEKAIAARVDAIIVQGLNEERFTPVIDKAVRRGIPVVTID--TDAPNSQRL-- 150 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 +V TDN+A G + +++ G G II A+ R +G + + Sbjct: 151 ---TYVGTDNLAAGERLGRLVVETTGGIGKIGVIIGSDQA-ANQLQRLDGLKKIVAEHEG 206 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 +++V + ++ ++A+ A N+L+ +P I + + T A+GV QA N + ++ Sbjct: 207 LEIVDVRSSNISHMEAIQQAANMLRNHPEITIMVGTSATDALGVLQAAKN---RDDLTII 263 Query: 248 GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 G D E + + G++ ATVAQ P +G T ++L+ + Sbjct: 264 GFDNQKETLEAIRKGEIEATVAQQPFLMGETAVRLLYE 301 >UniRef50_C0BVF8 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BVF8_9BIFI Length = 330 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 17/237 (7%) Query: 41 DMKKGIEDEAKTLGVSVDIFASPSEG-DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMP 99 D+KK ED D+ SP++ D Q Q+Q F N I + + Sbjct: 60 DLKKAFED------AGFDLVYSPTQNNDQQKQIQAFNKFVNDEVDAIVLSATNDSGWDDC 113 Query: 100 VARAWKKGIYLVNLDEKIDM--DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 + A + I + +D ID+ D KKA V + + NV G + A F+ +K +G Sbjct: 114 LENAAEAEIPVFTVDRNIDIKSDAAKKA---VVSHIGPSNVWAGEQAAEFV-NKSFPDGA 169 Query: 158 EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR--NP 215 I+EG AG + R G K AS IK++ SQ A+W +A V +L + + Sbjct: 170 NGFILEGPAGLSVVTDRGTGWDN--KAASNIKVLESQSANWSTDEAKTVTAGLLDKYKSD 227 Query: 216 NIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 N + I+ ND M +G AQAV AG GKV ++ DG A + + G ++ + NP Sbjct: 228 NPQFIFAQNDEMGLGAAQAVDAAGLKGKVKIITIDGTKAALQSLVDGDLSYVIEYNP 284 >UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI family n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQF4_AGRRK Length = 337 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 27/278 (9%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLK---------TLSNPFWVDMKK---GIEDEAKTLGV 55 T V +L T+ A YA K T N W D K + D TL V Sbjct: 9 LGATTVLCLLGTALTGAPAYAKTFKIAAIVQSLNTEYNVLWADAAKSHPALADGTATLTV 68 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 D +Q LF+ + Y I F P+ P+ RA GI + + Sbjct: 69 L------DGRQDVLTQSNLFDTAITEKYDAIIFIPVDIDAGNEPIERAKAAGIPVFGSNT 122 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 + L +A++ +++V G A +IDK G + +V ++EG G ++ R Sbjct: 123 VVSKTEL------YDAYINSNDVEAGEMLAKAVIDKAGKDA-KVVVLEGMLGQSAQVQRL 175 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQA 234 G K+ S + ++ A+W R +A+ + N L + + ++ + ND MA+G + Sbjct: 176 EGINNVLKQNSGVTILEQNTANWSRAEAITLMENFLTSHGDQVQGVLAENDEMAVGAIEG 235 Query: 235 VANAGKTGKVL-VVGTDGIPEARKMVEAGQMTATVAQN 271 + N G K L V G DGI +A + V+ G+ T ++ Q+ Sbjct: 236 IRNHGLDPKKLPVAGVDGIKDALEAVKRGEQTMSILQD 273 >UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderia RepID=Q0BAE1_BURCM Length = 321 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 81/280 (28%), Positives = 132/280 (47%), Gaps = 15/280 (5%) Query: 10 GTLVGLMLSTSAFAA--AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 GT+ G LST A AA A+++ T S +W KG + EA G+ VD+ + + + Sbjct: 14 GTISG-ALSTGADAANQPHVALLMPTQSVEYWALYIKGFQKEAAADGLKVDVKVTNYDAN 72 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 Q+ Q+ + L+ K I P+ S +V + + + I LV + D +K Sbjct: 73 EQA-TQVEQTLAQKP-DVIVLVPVDSSAMVPSIRKIDQARIPLVISNSMPD----QKYSR 126 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEG----GEVAIIEGKAGNASGEARRNGATEAFK 183 + F ++++ G A +I +G G+V +I G G R G + K Sbjct: 127 YWKVFTGPNDISNGEAAAKAMIQGFKEKGYGDKGKVIVINGPMGTPPQVQRYQGFVDGLK 186 Query: 184 K-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG-KT 241 K A I++V +QPADWD +KA A+ + + ++K +Y ND+ GV A G + Sbjct: 187 KNAPGIEVVGAQPADWDAVKAEAAASALFTQFKDVKGVYTENDSQLRGVVTAAQRLGLEP 246 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 K+++VG + + AG+ ATV Q+P D GA K Sbjct: 247 SKLVIVGHGCDAGGVEAISAGKAYATVEQSPFDDGAYAAK 286 >UniRef50_A9HFZ1 D-ribose-binding protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HFZ1_GLUDA Length = 330 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 16/269 (5%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 V + +L NPF++ +GI +AK LG + + + ++ D Q + + F Sbjct: 47 VTVGSLGNPFFIAAIRGITQQAKALGPTAPVQSVSADYDIGKQASQVDSFIAAGNDLVMF 106 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 + V R G +V D +A +TT+NV G +I Sbjct: 107 NAVDYQAAAPLVRRLHDSGATVVAFDV---------GAPGADATITTNNVKAGEISCQYI 157 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ-PADWDRIKALDVA 207 +D+L G +V I+ G A + R G F KA I+L++S A R L V Sbjct: 158 VDRLHGHG-DVVIVNGPPVTALSD-RVKGCQSVFAKAPGIRLLSSTLDAKGSRDGGLAVG 215 Query: 208 TNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ--MT 265 +V+ R + AI+ ND A+GV A AG+ + DG P+ + + G + Sbjct: 216 QSVMVRFDKVDAIFAVNDPTALGVELAARQAGRH-DFFLASVDGSPDVEQEMRGGNTLIA 274 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIP 294 AT +Q+P I T ++ D ++G++ P Sbjct: 275 ATASQDPFAIATTATRIGFDI-RAGRIKP 302 >UniRef50_A0QZW4 D-ribose-binding periplasmic protein RbsB n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QZW4_MYCS2 Length = 372 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 49/294 (16%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 LS+PF V K+ E+ K LG V++ ++ + + Q F D+ A A + Sbjct: 101 LSHPFLVKQKQLAEETGKRLGAQVNVISANDDVN-----QQFNDIQT------AIAQGTD 149 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 ++MP A +G+ V LK+A + + +G + AS ++ Sbjct: 150 ALMMMP---ATTQGLDAV----------LKQAEAAQIPYFFSQKGMLGVEPASQVLAPYS 196 Query: 154 AEG---GE-------------VAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 EG GE VAII G G+ S +AR N ++ +VA+QP + Sbjct: 197 NEGQQLGEWVVEHYKGQEDVKVAIISGIPGDQSSDARVNSFLLPLLRSCNFNVVANQPGN 256 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 + R + A N+L NP+I ++ AND A+G A+ ++G+ G V VVG DG + Sbjct: 257 YRRGDSEKAAQNMLAANPDIDLLFGANDEAALGGIAALKSSGRQG-VDVVGLDGQTDMFA 315 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +++GQ ATV P ++ VD + V PE++++D LVT+ Sbjct: 316 AIQSGQALATVIHKPT--AGIVVEEAVDYLRGKPV------PEYRVLDEDLVTK 361 >UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDP6_9FIRM Length = 309 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 19/273 (6%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 +G+ ++ T++NP++V+M + IE+ + G + I P + D + Q Sbjct: 16 IGIHEKKDTRKQLKFGATYMTMNNPYFVNMDENIEESVQAKG-DILITRDPLQ-DQKKQN 73 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMP-VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA 131 + +D+ N+ + P+ N V P + KK I + +D ++ + EA Sbjct: 74 EQIKDMINEGIDVLFLQPVDR-NKVRPALELCKKKHIPVFVIDSEV---------SDTEA 123 Query: 132 FVTT---DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQI 188 V+T DN G + A ++ K + I+ KA N+ E R G + K Q Sbjct: 124 VVSTIVSDNYDAGVQCAKDMMKK--KTSANIIIVNQKALNSINE-RVKGFRDTIKGHPQY 180 Query: 189 KLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVG 248 K+V + + + A+ V ++ N + ND +A+G A+ KT +V+V G Sbjct: 181 KIVEEKESAAEFEIAMKVMEKIIYEKKNYDVVMGGNDPIALGCIAAMQMTDKTDQVMVYG 240 Query: 249 TDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 DG P+ + M++AG + T AQ+P IG ++ Sbjct: 241 VDGSPDGKAMIKAGFLEGTAAQSPIKIGEKAVQ 273 >UniRef50_A1SYE6 Transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SYE6_PSYIN Length = 313 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 21/264 (7%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGI--EDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 TS A A+ L LSNPF++ + + I + EA+ G + I+ S D Q Q + Sbjct: 20 TSKAFALTVAISLVDLSNPFFIMLAEEISAQLEAQVEG-QLTIYVHSSAYDLNQQNQQIK 78 Query: 77 DLSNKNYKGIAFAPLSSVNLVMP-VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 D NK I F S+ + + P + A +KGI + +D ++ G ++ +T+ Sbjct: 79 DFINKEVD-IIFISASASDAIEPSIISAREKGIIVAAVD-------IESRGADIS--ITS 128 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQ 194 DN G +++D+LG +G E+AII G +S R G + KK IKLV+ S Sbjct: 129 DNFQAGQLSCQYLVDRLGGKG-EIAIINGWTTISSTSNRVAGCRDLLKKYPGIKLVSYSH 187 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP- 253 L+ T ++ PN++A++ ND A+G +A +G K+++ DG P Sbjct: 188 NGSGSFSGGLESMTYLMLEYPNLEAVFAINDLAALGAEEAAKQSGN-NKIIIASVDGSPL 246 Query: 254 --EARKMVEAGQMTATVAQNPADI 275 E K+ ++ + AT AQ P I Sbjct: 247 FLEHLKLKDS-LLVATAAQFPRAI 269 >UniRef50_C6PN50 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN50_9CLOT Length = 333 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 12/231 (5%) Query: 24 AAEYAVVLK--TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 + EY + + L P+ + M + I +EAK ++ I + GD Q + ++L N Sbjct: 38 SVEYVIGMSQANLYEPWRISMNEEISNEAKKYK-NIKIVYKDAGGDTNKQKKDIDELLNS 96 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + + S L V++A+K + +V LD ++ G N ++ DN +G Sbjct: 97 GIDLLIVSINDSEKLTPVVSKAYK-SVPVVVLDRAVE-------GYNYSVYIGPDNEKIG 148 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 + ++D LG G V I+G + R G EA K+ IK+V + +W + Sbjct: 149 REAGKMVVDLLGNSEGRVIEIQGLLNSHPDIDRSKGFREAIKQCDNIKIVRTVIGEWQKD 208 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 +A D +L+ + NI I+ ND MA+G +A G + ++G DG+ Sbjct: 209 EAEDKIEELLKEDRNIDIIFAHNDYMALGAYKAAYKLG-INNIKIIGVDGL 258 >UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRB9_9FIRM Length = 333 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 18/253 (7%) Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 P+ K E K L + V++ D Q ++ + GI +P+ + Sbjct: 48 PYIAAYKNCFEKAEKDLNIKVNLVDGG--WDANQQANAIQNAISSGADGIVISPVDPSAV 105 Query: 97 VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA--------VGAKGASFI 148 V A GI + L +I G+ E V + V VG Sbjct: 106 CTYVDEALDAGIEVCALTTQI-------GTGDAEDPVYPETVGLVGHIETEVGRTAMDIA 158 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 + L G++AIIEG G + E R+ G E K+ I++V+ +W KA Sbjct: 159 AEALD-RSGKIAIIEGTPGMSDTEGRKKGIDEENKEYPDIEVVSRVCGEWVVDKAYTAMQ 217 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 N++Q NP ++ + C +D MA+G A+A+ +A T KV +VG G +A +++ G++ T+ Sbjct: 218 NIIQSNPEVELVICHSDNMAVGAAKALEDADMTDKVKIVGIGGSKDALDLIKKGEIYGTI 277 Query: 269 AQNPADIGATGLK 281 P T L+ Sbjct: 278 MYVPETEAYTALE 290 >UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU6_PAESJ Length = 330 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 12/261 (4%) Query: 36 NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN 95 NP+W +++G + A+ G+ ++ + P+ D + +++ E GI L Sbjct: 59 NPYWRLVQQGAREAAQQKGIELE-YLGPARADVKEHIKILEMAIASKVDGIITQGLEENE 117 Query: 96 LVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 + A + GI ++ +D D + K+ A+V TDN A G +I K A Sbjct: 118 FTPIINEAARMGIPIITVDS--DAPHSKRV-----AYVGTDNYAAGYMAGRELIAK-SAG 169 Query: 156 GGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP 215 EVA+I G ++ + R G +A K I ++ ++ RI++ A + Q+ P Sbjct: 170 RAEVALITGSFTASNQKDRVRGFKDAVKTYPGIHIIDIAESNISRIQSAASAYTLAQKYP 229 Query: 216 NIKAIYCANDTMAMGVAQAVANAG-KTGK--VLVVGTDGIPEARKMVEAGQMTATVAQNP 272 I + +G+AQ + G +T K + ++ D +PE ++ G + +T+ Q P Sbjct: 230 EIDTFVGTSALDGLGIAQMLKEMGSETLKTPIRIIAFDDLPETLTLINQGVIESTIVQQP 289 Query: 273 ADIGATGLKLMVDAEKSGKVI 293 +G + L++D K K++ Sbjct: 290 FIMGRESVNLLMDYLKGEKIV 310 >UniRef50_C6C3I7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=C6C3I7_DICDC Length = 311 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 12/266 (4%) Query: 17 LSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 LS +A AA + +++ +L NP++ KG + +A+ LG + + D + Q +L Sbjct: 16 LSLTAHAAEKGTIMILVNSLDNPYYASEAKGADKKAQELGYKTTVLSHGE--DVKKQSEL 73 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + K +GI S V + +A GI +V ++ +I +D++ +T Sbjct: 74 IDAAIGKKVQGIVLDNADSTASVAAIKKAKAAGIPVVLINREIPVDDVALVQ------IT 127 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 +N G+ A+ ++K+G E G+ A + + + R + + + +A Q Sbjct: 128 HNNFQAGSDVANVFVEKMG-EKGKYAELTCSLADNNCVTRSKSFHQVLDQYPGMASIARQ 186 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 A I + ++LQ +P++K + C N +A+G A+ AG+ V+VVG DG + Sbjct: 187 DAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGRN-DVVVVGIDGSND 245 Query: 255 ARKMVEAGQMTATVAQNPADIGATGL 280 R V+ G + ATV I A G+ Sbjct: 246 ERDAVKEGSLKATVMLQAQAIAAQGV 271 >UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacteria RepID=B2T1S7_BURPP Length = 339 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 20/247 (8%) Query: 35 SNPFWVDMKKGIEDEAKTLG---VSVDIFASPSE--GDFQSQLQLFEDLSNKNYKGIAFA 89 +NP+ + K +D A G V D +S S+ D Q+ + DL + F Sbjct: 61 NNPWRLAETKSFKDIAAKCGWQLVMTDANSSNSKQVSDIQNMIAQHVDL-------LVFP 113 Query: 90 PLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII 149 P L V +A K GI ++ +D +D ++ KAG + F+ +D + G + A +++ Sbjct: 114 PREEKPLAPVVLQAKKAGIPVILVDRDVDQ-SVAKAGRDYITFIGSDFIDQGHRAADWLV 172 Query: 150 DKLGAEGGEVAIIE--GKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVA 207 A GG+ IIE G G ++ R+ G E K + ++ASQ D+ R K V Sbjct: 173 K---ATGGKAKIIELEGTTGASAANDRKKGFDEIIAKNPGMTIIASQSGDFARDKGRQVM 229 Query: 208 TNVLQRNPNIKAIYCANDTMAM-GVAQAVANAGKTGK-VLVVGTDGIPEARKMVEAGQMT 265 +LQ +P++ A+Y ND MA+ +A A + GK + +V DG + AG++ Sbjct: 230 ETLLQAHPDVTAVYAHNDEMALGAIAAIKAAGKQPGKDIQIVTIDGTKGGMDAIAAGELG 289 Query: 266 ATVAQNP 272 A+V +P Sbjct: 290 ASVQSSP 296 >UniRef50_C0EIT8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIT8_9CLOT Length = 338 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 15/269 (5%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 T F+ ++KG+ D+A LG+ +I + D + +L N + P Sbjct: 57 TRDQTFFQQLEKGVVDKATELGI--EIKTHDQKNDSNEMVTGCTNLINSGVDALIVCPCK 114 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 + V A +K I ++ D + + +A + +D A G + + L Sbjct: 115 PEAMGNIVTLAHQKDIPVIITD-------IGDGDSDKDAIIISDMKAGGQMAGVYTAELL 167 Query: 153 GAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATN 209 + GEVAII+ + + R G E +KA + A+ + + V + Sbjct: 168 KEKSITSGEVAIIKCEESAVYAQRRNEGYKEEIEKAG-FTVAKELVANSKQEEGYTVMKD 226 Query: 210 VLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVA 269 +L NP+I A++ AND MA G A A+ AGKT V+V G +G A + + G+M TVA Sbjct: 227 ILASNPDIVAVFAANDPMAAGAASALQEAGKT-DVIVTGFNGDDIALEYIADGKMMGTVA 285 Query: 270 QNPADIGATGLKLMVDAEKSGKVIPLDKA 298 Q+ IGA G++L A + GK IP D A Sbjct: 286 QDVLGIGAKGVELAKLAVE-GKDIPYDNA 313 >UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET05_9FIRM Length = 336 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 17/259 (6%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIA 87 AV+ + + F VD+ G E +A LG +V + GD Q ++ + EDL + I Sbjct: 57 AVLAWSQAEEFGVDIISGAEKKAAELG-NVTVVKPDPAGDMQKEIAILEDLIQQGVDAIC 115 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP+ + +V + + + GI LV+ D ID + +A V +DN A GA A + Sbjct: 116 VAPVDANAIVPYIDKVREAGIVLVDYD--IDTE------AQCDAKVLSDNAAGGAMAADY 167 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKALDV 206 ++ ++G E G+V I+ G + E R G + + A +++V Q ++ R Sbjct: 168 LVQEMGTE-GKVLILTEVPGVTTAEERIAGFKDRMAEIAPNVEMV-EQLSNGTRDTHRAT 225 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE----AG 262 N+LQ +P+I I+C ++G A + VL+ G D PE +++ Sbjct: 226 TENMLQAHPDITGIFCFMGDNSLGAYTACKTNNRQ-DVLIAGYDATPEQLDIMKNDGPDC 284 Query: 263 QMTATVAQNPADIGATGLK 281 + +VA P IG L+ Sbjct: 285 NLICSVALYPKKIGYVALE 303 >UniRef50_B7DPH3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPH3_9BACL Length = 329 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 23/282 (8%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 ++PF++ M G + EAK LGV + I+ S +Q + +++ + P Sbjct: 52 TDPFFISMAYGAQQEAKKLGVKL-IYEGASTYSPSAQTPYVNAMVSRHVNALIVCPTDLT 110 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 ++ P+ +A GI ++ D I +L + + +T+DN GA A F+ + Sbjct: 111 AMIPPIKQAVNAGIKVLTADSTISDASL------LTSRITSDNEQGGAAAADFL-GSMAH 163 Query: 155 EGGEVAIIEGKAGNASGEARRNG-ATEAFKKASQIKLVASQPADWDR---IKALDVATNV 210 G V +++ G ++ +AR +G E KK +IK+V ++D +A +A ++ Sbjct: 164 GQGVVGVLDPSPGISTDKARVDGFIAEMKKKYPKIKVVI----EYDNEQTTQAEQLAQDL 219 Query: 211 -LQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVA 269 L ++ I+ +DT A G AQ V ++G V +VG D P + ++ G ++A +A Sbjct: 220 MLHYGKSLVGIFGTDDTSASGAAQGVRSSGSATHVNIVGYDAEPAEVQDLKEGMISALIA 279 Query: 270 QNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 Q P G ++ V+A + V P+F + ++++T+ Sbjct: 280 QKPMIEGELAVEYAVEALEHKSV------PKFVQLPNVVITK 315 >UniRef50_B1ZDA2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZDA2_METPB Length = 308 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 1/173 (0%) Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 N A V+ +++ G + +LG + G VAI+ GK + + + R G E + Sbjct: 123 NRMAIVSANHLVAGRVQMRMLAQRLG-DRGNVAILRGKDSDNAAQERTAGVKEILGQRPG 181 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 +KL+A ADW R +A D T L+ AI ND MA+G A+ AG +GK+LV Sbjct: 182 LKLLAEASADWSRRQAQDQVTAWLRSGLKFDAIAANNDEMALGAVAALKAAGLSGKILVG 241 Query: 248 GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 G DG + V++G ++ +V Q+ GA + V + V P D P Sbjct: 242 GVDGTSDGIAAVKSGDVSVSVLQDAPLQGAQAVNDAVKLARGEYVQPYDWVPH 294 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 81/303 (26%), Positives = 129/303 (42%), Gaps = 11/303 (3%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 KYLK LV + +++ A V + F ++ I+ EAK G+SV Sbjct: 2 KYLKRI--VLVAALGCSTSVLAETIGVSMAYFDQNFLTIIRHSIDKEAKARGISVQF--E 57 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 + GD Q ++ + I P++S K GI LV ++ + D+ Sbjct: 58 DARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIPLVYVN-RTPGDSK 116 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 AG FV +D G + +L G VA++ G +A R + Sbjct: 117 LPAG---VVFVGSDEKQSGTLQMEELA-RLANYQGNVAVMIGNLTDAGALQRTKDVEQVV 172 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 K ++K+V Q A++ R + +D+ N + +I + ND MA+G A+ AGK G Sbjct: 173 AKYPKMKVVQKQSANYSRSEGMDLMLNWITNGESIDIVAANNDEMAIGAIMALQQAGKQG 232 Query: 243 -KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 KVLV G D P+ K + +G+M TV Q+ G + + K K+ P P F Sbjct: 233 SKVLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIKGEKLDPYYWIP-F 291 Query: 302 KLV 304 +LV Sbjct: 292 ELV 294 >UniRef50_B1JS18 ABC transporter, periplasmic sugar-binding protein n=23 Tax=Yersinia RepID=B1JS18_YERPY Length = 362 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 22/295 (7%) Query: 13 VGLMLSTSAFAAAEYAVVL--KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQS 70 +G+++ A A ++ K+L F+V + ++ L S + A+ + D Sbjct: 23 LGMVIGRGALAQNRLSIPYSNKSLDYYFFVIQEASVK--RAVLARSGEFQATNANFDNTR 80 Query: 71 QLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVE 130 QL+ ++ L I P+ S +V + R ++ I + +D D GG+V Sbjct: 81 QLEQWQSLLLSRPSAIISDPIDSQAIVSAIRRYNREKIPVGIIDTPAD-------GGDVA 133 Query: 131 AFVTTDNVAVGAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS 186 V+ DN G A I+++L G G V G + + R+ G F K Sbjct: 134 ITVSFDNFQGGVMAAEEIVNRLITRYGRPKGTVLNCYGALASVAWRLRKEGMDSVFAKYP 193 Query: 187 QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------ 240 I +A +P D K L V + L P++ A++ +D+ + G+ A+ G+ Sbjct: 194 GITYLA-RPTDGQLEKMLSVTLSTLSEYPDLDAVHAPSDSPSRGIVTALQQKGRWKKIGE 252 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 G V+ V DG P A K ++ G M A ++Q+P G + ++V G+ +PL Sbjct: 253 AGHVIFVNIDGEPIALKWIQDGYMDACISQDPVAYGEIAVDMIVKHALKGEAVPL 307 >UniRef50_A0LST2 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A0LST2_ACIC1 Length = 384 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 34/288 (11%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++LK +NP+W+ M+ + EA LGV + + A ++ D SQ+Q + + YKGI Sbjct: 64 LILKEFTNPYWISMENAAKAEAAKLGVDLHVSAGKADDDATSQIQQIDAAISAGYKGIII 123 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 A ++S + + RA G+ +V +D ++ + TDN+ G ++ Sbjct: 124 A-INSDAVNTALQRAKAAGLLVVVVDTPPIPASI------ADVTYATDNLQAGLFIGKWM 176 Query: 149 IDKLGAEGGEVAIIEGKAG------------------------NASGEARRNGATEAFKK 184 KL ++A+++ A N +G+ ++G K Sbjct: 177 AQKLNGANADIAMLDDLANQVITVDVDRDHGFLQGMGIPVGNPNVNGQEPKSGHYTGGKG 236 Query: 185 ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT-GK 243 S K+ P + L L ++PNI +Y N+ A G AQA+ NAGKT GK Sbjct: 237 GS-YKIACQLPTNGSATGGLSAMETCLSKDPNINVVYTINEPAAKGAAQALKNAGKTPGK 295 Query: 244 -VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 V +V DG ++ +G++ A Q P + G+ + K+G Sbjct: 296 DVTIVTIDGSCNYLSLLTSGEIGADSGQFPGKMAQLGVDAIAQFAKTG 343 >UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic component n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK7_ANOFW Length = 332 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/283 (21%), Positives = 130/283 (45%), Gaps = 11/283 (3%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAF 88 ++ + NP+W +++G ++ K V+++ + P Q++L E GI Sbjct: 57 LISQEFDNPYWRKIEQGAKEAGKNYDVNIE-YIGPLRTSVDEQVKLLEKAIASRVDGIIV 115 Query: 89 APLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFI 148 L + + +A + I ++ +D D ++ A+V T+N G + Sbjct: 116 QNLKDEAFIPLIDKAISRNIPVITIDA--DAPKSRRI-----AYVGTNNFEAGQLLGKAV 168 Query: 149 IDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVAT 208 + ++ E E+ ++ G + + R G + ++K+V+ ++ RI+A A Sbjct: 169 VSRVEGER-ELGVMIGTDTSENQRLRLQGFLSVIAEHPRLKVVSVASSNISRIQASIQAE 227 Query: 209 NVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATV 268 +L+++P+I + + A+G+ A N + + + G D + E + ++ G + ATV Sbjct: 228 QMLRKHPHISVMVGTSALDAIGIRMATKNLHRQD-IQIFGFDDVEETIEAIQQGDIVATV 286 Query: 269 AQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 Q P D+G + +KLMV+ SGK I + +++D V Q Sbjct: 287 VQKPYDMGYSAVKLMVE-HLSGKQIQKEHFTAIEVIDRQNVQQ 328 >UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasmic component) n=2 Tax=Firmicutes RepID=Q97J33_CLOAB Length = 325 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 9/210 (4%) Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 D Q+Q + K I P+ + + A GI ++ +D + D L Sbjct: 84 DKNKQMQQIYEFIKLKVKAIFINPVDWKQIKPALIAAKNAGIPVIVVDTPVYDDKL---- 139 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS 186 V V +DN G + A +++ K ++ + I KA SG R G + + Sbjct: 140 --VACTVISDNYDAGVQCAKYLM-KSKSKANIMLIEHSKA--KSGIDRIKGFVDTIGASK 194 Query: 187 QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLV 246 Q K+VA+ ++ K + + ++++++ N+ AI ND A+G A+ G GKV+V Sbjct: 195 QYKIVAAGDSEGQLDKTMSLVDDLIKKHTNVDAIMALNDPSALGALAALKENGLLGKVMV 254 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIG 276 G DG PEA+ M+ G MTAT AQ P IG Sbjct: 255 FGVDGSPEAKTMIHDGFMTATSAQFPNKIG 284 >UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales RepID=C5EPY8_9FIRM Length = 356 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 21/281 (7%) Query: 27 YAVVLKTLS--NPFWVDMKKGIEDEAKTL---GVSVDIFASPSEGDFQSQLQLFEDLSNK 81 Y V L S N + M++ EA+ L GV + + + S D Q+ +DL K Sbjct: 49 YVVALCNYSIGNSWRAQMEQEFVAEAEKLKAEGVVSEYYITNSNDDINKQISDMQDLITK 108 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 GI S L V A + GI +V+ D +D D A V D G Sbjct: 109 KVDGIVITAASPTALAPAVEEATEAGIKVVSFDNVVDTDEQV-------ATVGIDQTEFG 161 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 A +++ KL +G ++ ++ G AG A+ R NGA E FK+ I+++ S A WD Sbjct: 162 RVCADWLVKKLDGKG-KIVVLNGIAGTANDTMRWNGAEEVFKQYPDIEILGSANASWDYA 220 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA-RKMVE 260 + ++L P I ++ M G A AG+ K++ + ++G A R +E Sbjct: 221 QGKAAMESMLSAYPEIDGVWSQGGAMTQGAIDAFIAAGR--KLVPMTSEGNNGALRAWIE 278 Query: 261 AGQ--MTATVAQNPADIGATGLKLMV---DAEKSGKVIPLD 296 ++ +P GA L+ ++ D E+ K + LD Sbjct: 279 NRDNGLSCIAPSDPTYSGAEALRTVIKSLDGEEVPKRVTLD 319 >UniRef50_C0RMD7 Rhizopine-binding protein n=23 Tax=Brucella RepID=C0RMD7_BRUMB Length = 389 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 21/265 (7%) Query: 37 PFWV-DMKKGIEDEAKTL---GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 P W+ + I DE L G+ D+ + ++G+ Q+Q+Q + + + N I S Sbjct: 59 PTWMKQTEDTIVDEVAQLKKEGLVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGS 118 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 S L +A A +KGI ++N D +D +NL A + TD+ G + A +++D+L Sbjct: 119 SSALDRVIADACEKGIAVINFDSLVDTENLT-------AKINTDSAEWGERAAQWMVDQL 171 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQ 212 G + G++ I+ G AG + + RR GA I+++ +++ A + T++L Sbjct: 172 GGK-GKIIIMNGPAGVSVSDDRRKGAQPVLDANKGIEIITETNTEYNVAPAQEAMTSLLF 230 Query: 213 RNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ---MTATVA 269 NP I + + +A G A G+ V + G + AR+ +E + + A Sbjct: 231 ANPEIDGVLSLSGAIAAGAVLAFDRQGRD-PVPITGEN----ARQFLELWKEKGLKAWAT 285 Query: 270 QNPADIGATGLKLMVDAEKSGKVIP 294 P +GA + V A + GK IP Sbjct: 286 MQPNWLGAFSVYAAVQALE-GKDIP 309 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 9/251 (3%) Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 P++ + +G+ D + L V +D+ ++ D +Q+ + + I P+ +L Sbjct: 67 PYFSKLVEGMTDLQEELNVELDV--QDAQDDTNTQINQIQTFIAEGCDLIIMMPVQLESL 124 Query: 97 VMPVARAWKKG-IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 + P+A + I ++ +D K+ + K G ++ V D+V G K + LG E Sbjct: 125 I-PIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGELVHQLLGDE 183 Query: 156 GGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQR- 213 G +A+I+G G +S R+ G E + A I++VA+Q +D D+ +A+ V N L R Sbjct: 184 GS-IALIQGTLGASSQVLRQQGLEEYLSENAPGIEIVAAQNSDQDQSQAITVTQNFLTRF 242 Query: 214 -NPNIKAIYCANDTMAMGVAQAVANAGKTGKV-LVVGTDGIPEARKMVEAGQMTATVAQN 271 I AI + A+G A+ +A + + V+G D E ++A M + Q Sbjct: 243 AKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAKDMYGSTLQA 302 Query: 272 PADIGATGLKL 282 P D+GA L++ Sbjct: 303 PYDMGALTLQV 313 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 23/263 (8%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 ++ T++NPF+ ++K I E + G + I P+ D Q+ D+ + + Sbjct: 42 KFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQL-ITMDPAM-DVSKQIDQINDMITQGVEA 99 Query: 86 IAFAPLSSVNLVMPVARAWKKG-IYLVNLDEKI-DMDNLKKAGGNVEAFVTTDNVAVGAK 143 + P+ V P A KK I ++N D ++ DM+ V A+V +DN G Sbjct: 100 VFLNPVDWEG-VRPGLEALKKANIPIINFDTEVKDMNY-------VTAYVGSDNKNAGKV 151 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIK---LVASQPADWDR 200 ++ + GG++AI+ N+ N FK A + K +VA Q D Sbjct: 152 CGDDLVKRY-PNGGKIAILNCPTMNSI-----NDRIAGFKSAIEGKNFTIVAEQDGKGDL 205 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV- 259 ++ +A ++LQ + +I AI ND A+G A A + K K+L+ G DG P+A+K + Sbjct: 206 QTSMKLADDILQSHSDIVAIMGGNDPTALG-ALAACKSAKQSKILIYGVDGSPDAKKEIA 264 Query: 260 EAGQMTATVAQNPADIGATGLKL 282 GQ T AQ+P IG +L Sbjct: 265 SGGQFVGTGAQSPKQIGVKSAEL 287 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 13/280 (4%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPS 64 K+ G + ++L T+A A V + + F ++ G+ D +K L GV++ + + Sbjct: 3 KFIIGAAMSVLLGTAAHAET-VGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQV--EDA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK-IDMDNLK 123 + D Q ++ I P+ + A I LV ++ + +++D+L Sbjct: 60 QNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDSLP 119 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 +AFV +D G A + LG +G V I+ G+ N + R A + K Sbjct: 120 DG----QAFVASDETVAGTLEAKEVCRLLGGKGNAV-IMMGELSNQAARMRTQSAKDVLK 174 Query: 184 --KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 + I +V Q A+W R + D+ TN L A+ ND MA+G QA+ AGK Sbjct: 175 TDECKGISVVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKD 234 Query: 242 GKVLVV-GTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 K VV G D +A ++AG + TV Q+ A G L Sbjct: 235 MKSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGAL 274 >UniRef50_C7Q346 Sugar ABC transporter substrate-binding protein n=8 Tax=Actinomycetales RepID=C7Q346_CATAD Length = 350 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 17/262 (6%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 FW + A LG+S+ S S+ D + + KG+ AP + + Sbjct: 46 FWNSYIQYTPQFASQLGLSIKT--SNSQNDVAKLAANAQAFMAEGVKGVVMAPQDTAAIA 103 Query: 98 MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 +++ K I +V++D + D G+V V DN A G K F+ KL +G Sbjct: 104 PTLSQLAAKKIPVVSVDTRPDT-------GSVYMVVRADNRAYGTKACQFLGTKLSGKG- 155 Query: 158 EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNI 217 V ++EG + +G R + K++ V + +WD A L +P++ Sbjct: 156 SVVMLEGDLSSINGRDRTDAFNACMKQSFPGITVYGEATNWDAATAAQKLQTDLTAHPDV 215 Query: 218 KAIYCANDTMAMGVAQAVANAGKTG------KVLVVGTDGIPEARKMVEAGQMTATVAQN 271 K +Y + G Q + G V VV DGIPE K + AG++ ATV+Q Sbjct: 216 KGVYMESSFALSGTLQLLQQKGLMAPPSDPKHVFVVSNDGIPEELKDIAAGKIDATVSQ- 274 Query: 272 PADIGATGLKLMVDAEKSGKVI 293 PAD+ A + A GK Sbjct: 275 PADLYAKYALFYIQAAVQGKTF 296 >UniRef50_A6M1U1 Periplasmic binding protein/LacI transcriptional regulator n=44 Tax=Bacteria RepID=A6M1U1_CLOB8 Length = 335 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 12/227 (5%) Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 TL + D+ S + ++Q++ + IA P+ + A I +V Sbjct: 71 TLDPNFDLKFSDGQQKQENQIKAIRSFIAQKVDLIALDPVVETGWDTVLKEAKDAKIPVV 130 Query: 112 NLDEKIDM--DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG-EVAIIEGKAGN 168 +D K+ + D+L K F+ +D VA G K A +ID+ G + +A ++G G+ Sbjct: 131 IVDRKVTVSDDSLYKC------FLGSDMVAEGKKAAQILIDQFGKDATLNIAELQGTVGS 184 Query: 169 ASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTM 227 + R+ G +A K K++ SQ D+ R K +V L+ + + I ++ ND M Sbjct: 185 TAMVGRQQGFNDAIKDCPNYKIIKSQTGDFTRAKGKEVMEAFLKSDGDKINVLWSHNDDM 244 Query: 228 AMGVAQAVANAGKT-GK-VLVVGTDGIPEARKMVEAGQMTATVAQNP 272 AMG QA+ GK GK + +V DGI + + + G+ ATV NP Sbjct: 245 AMGAIQAIEEYGKKPGKDIFIVSVDGIKDIFQAMVDGKANATVECNP 291 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 79/293 (26%), Positives = 126/293 (43%), Gaps = 23/293 (7%) Query: 1 MNKYLKYFSGTLVGLML--STSAFAAAEYAVV--LKTLSNPFWVDMKKGIEDEAKTLGVS 56 MN+ + G M+ + S FA + ++ + L PF+V M I+ EA+ GV+ Sbjct: 21 MNRREFLLTSVAAGAMVLAAPSVFAEDKLTILGSVPNLGFPFFVHMLNEIKAEAQAQGVN 80 Query: 57 VDIFASPSEGDFQS----QLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 + +E D Q+ Q E + I +PL L + A K G+ +V Sbjct: 81 L------TESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGVPVVT 134 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 +D ++D + A V DNV G AS ++ G ++ ++G+ G Sbjct: 135 IDRRVD------GVQGILAHVGADNVKGGEAEASAMVAAF-PNGAKLFHLQGQPGAGPAI 187 Query: 173 ARRNGATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 R G + +++ Q A++ R +AL V L N AI CAND MA+G Sbjct: 188 DRNKGVHNVLDPLKDKYQIIFEQTANFARAEALSVTEAGLAANGKPDAIICANDDMALGA 247 Query: 232 AQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMV 284 +A A T V + G D +PEA V G++ TV Q P T +++ V Sbjct: 248 LEACAARNFT-DVKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAV 299 >UniRef50_A7NMH5 ABC-type sugar transport system periplasmic component-like protein n=2 Tax=Roseiflexus RepID=A7NMH5_ROSCS Length = 372 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 24/256 (9%) Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 + E G++ ++ ++ D Q+Q ++L NK I P L + A Sbjct: 74 VNKEYMERGITNELVIESADTDVAGQIQQLQNLINKGVDAILVNPSDVNGLNDTLQEAIN 133 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 KGI ++++D++++ + G D A ++ +KLG +G + +IEG Sbjct: 134 KGIIVISVDQELNTPGVYNVG--------IDQKEWAKISARWLAEKLGGQG-NIVLIEGF 184 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 G+ + AR G E K+ IK++ + WD V +N L PN+ Y D Sbjct: 185 PGHPANVARMEGVEEVLKEYPNIKVLGRETGKWDEATGQQVMSNFLASFPNLDG-YWTQD 243 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEAR---------KMVEAGQMTATVAQNPADIG 276 MA+G QAV A + ++VG E R ++ E NP + Sbjct: 244 GMAIGAMQAVMAANPSKWPVLVG-----EGRCQFLQLWDQRLKEDPNFETIAVANPPGVS 298 Query: 277 ATGLKLMVDAEKSGKV 292 TGL++ ++ + +V Sbjct: 299 PTGLRIAINMLQGKQV 314 >UniRef50_B5CR03 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CR03_9FIRM Length = 332 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 14/251 (5%) Query: 34 LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS 93 +SNPF+ +K ++ + G + + P+ GD + Q ++L ++ + P+ Sbjct: 59 MSNPFYATLKDSVQSALEEQGDKL-LIKDPA-GDAERQNTQIQELIEEDVDAVFLCPVDW 116 Query: 94 VNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG 153 + + + I ++NLD K+ G V AFV +DN G ++++ Sbjct: 117 KKIEPALDALEEADIPVINLDTKV------YESGKVAAFVGSDNRNAGYVCGEDLVER-K 169 Query: 154 AEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR 213 +GG+V I+E N+ E R G EA K + ++V D VL + Sbjct: 170 PDGGQVVIVENLNVNSVCE-RITGFEEAVSKGA-FEVVKRIQTGNDVSGLKQQVAQVLAQ 227 Query: 214 NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK-MVE-AGQMTATVAQN 271 NP++ AI C +D MA V +A+ AG+ KV V DG P ++K +VE G M AQ+ Sbjct: 228 NPDLDAIMCGDDQMAEQVREAITEAGQE-KVYVYSVDGSPASKKALVEHTGGMMGIGAQS 286 Query: 272 PADIGATGLKL 282 P ++G +K+ Sbjct: 287 PINLGKKAVKI 297 >UniRef50_A6U6C1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6U6C1_SINMW Length = 319 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 7/238 (2%) Query: 51 KTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYL 110 K LGV V+I A+P+ + Q+ + + + I P SS L+ P+ A G + Sbjct: 54 KELGVKVNIQAAPTYSASE-QIPVLNAVMATSPSAIVLDPTSSTALIAPLMEAAANGAKI 112 Query: 111 VNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNAS 170 V +D +D ++ + A V TDN +VG + A + L + G+VA I G ++ Sbjct: 113 VAVDTTLDDPSV------LSAVVGTDNESVGRETAKALAKALDGKSGKVAQINSIPGIST 166 Query: 171 GEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMG 230 +AR G E KK + + +Q A D KA +++ NP++ + ++ A+G Sbjct: 167 VDARIKGFEEEIKKYPNLTYIGNQFASEDIPKAQQAYVSLMSANPDLIGVVSQSNNPAIG 226 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 VA + + V+ + D + + G + A V Q P ++G G K V A K Sbjct: 227 VAGGIRSTETAESVVAIAVDADEAEIEALNEGLLDALVIQQPYEMGYVGFKQAVAAVK 284 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 377 e-103 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 324 2e-87 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 293 6e-78 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 262 1e-68 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 257 4e-67 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 251 2e-65 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 251 2e-65 UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clo... 250 4e-65 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 249 7e-65 UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerot... 249 1e-64 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 249 1e-64 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 247 5e-64 UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding... 246 6e-64 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 245 1e-63 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 244 3e-63 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 244 3e-63 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 240 5e-62 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 240 5e-62 UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Str... 239 1e-61 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 239 1e-61 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 239 1e-61 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 239 1e-61 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 238 2e-61 UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpe... 237 5e-61 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 236 6e-61 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 236 8e-61 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 235 1e-60 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 235 1e-60 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 235 1e-60 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 234 3e-60 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 234 5e-60 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 232 1e-59 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 231 2e-59 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 230 5e-59 UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein ... 229 8e-59 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 228 1e-58 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 228 1e-58 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 228 2e-58 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 228 2e-58 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 228 2e-58 UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding... 228 2e-58 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 227 4e-58 UniRef50_A1STY3 Transcriptional regulator, periplasmic binding p... 227 4e-58 UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 227 5e-58 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 226 6e-58 UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotro... 226 7e-58 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 225 1e-57 UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostri... 225 2e-57 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 224 2e-57 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 224 3e-57 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 223 4e-57 UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Pr... 222 1e-56 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 222 2e-56 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 222 2e-56 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 221 2e-56 UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional... 221 3e-56 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 220 4e-56 UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesor... 220 5e-56 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 220 6e-56 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 220 6e-56 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 219 8e-56 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 219 8e-56 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 219 9e-56 UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-bindi... 218 2e-55 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 217 3e-55 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 217 3e-55 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 217 4e-55 UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 217 4e-55 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 217 5e-55 UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Ga... 217 5e-55 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 217 5e-55 UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding... 216 6e-55 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 216 8e-55 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 215 1e-54 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 215 2e-54 UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostri... 215 2e-54 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 215 2e-54 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 214 2e-54 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 214 2e-54 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 214 3e-54 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 213 6e-54 UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Rei... 213 6e-54 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 213 6e-54 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 213 7e-54 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 213 9e-54 UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional... 212 1e-53 UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=... 212 1e-53 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 211 2e-53 UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic com... 211 3e-53 UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Ta... 210 4e-53 UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional... 210 4e-53 UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostri... 210 4e-53 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 210 4e-53 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 210 5e-53 UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia... 210 5e-53 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 210 7e-53 UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Ba... 209 8e-53 UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional... 209 8e-53 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 209 1e-52 UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional... 209 1e-52 UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostri... 209 1e-52 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 208 2e-52 UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic com... 207 3e-52 UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Paste... 207 3e-52 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 207 4e-52 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 207 5e-52 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 207 6e-52 UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostri... 206 7e-52 UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 T... 206 7e-52 UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional... 205 1e-51 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 205 1e-51 UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasm... 205 1e-51 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional... 205 2e-51 UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3... 205 2e-51 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 205 2e-51 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 204 2e-51 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 204 3e-51 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 204 4e-51 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 204 4e-51 UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 203 4e-51 UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional... 203 5e-51 UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Di... 203 7e-51 UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic suga... 203 8e-51 UniRef50_A7II12 Periplasmic binding protein/LacI transcriptional... 202 1e-50 UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transc... 202 1e-50 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 202 1e-50 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 202 1e-50 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 202 1e-50 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 202 1e-50 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 202 2e-50 UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional... 202 2e-50 UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional... 201 2e-50 UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaeros... 201 3e-50 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 201 3e-50 UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional... 201 3e-50 UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional... 200 4e-50 UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional... 200 4e-50 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 200 5e-50 UniRef50_C0Z4C9 Putative ABC transporter substrate binding prote... 200 6e-50 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 199 8e-50 UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantel... 199 8e-50 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 199 9e-50 UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional... 199 1e-49 UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium ... 198 2e-49 UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostri... 198 2e-49 UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional... 198 2e-49 UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=... 198 2e-49 UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-... 198 3e-49 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 198 3e-49 UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacte... 197 3e-49 UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette tran... 197 4e-49 UniRef50_UPI000185D1D6 putative DNA-binding response regulator/s... 197 5e-49 UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional... 197 5e-49 UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminoc... 197 5e-49 UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding ... 197 6e-49 UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibac... 197 6e-49 UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding prot... 197 7e-49 UniRef50_A1WGA7 Periplasmic binding protein/LacI transcriptional... 196 7e-49 UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional... 196 7e-49 UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional... 196 9e-49 UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Prot... 196 9e-49 UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthroba... 195 1e-48 UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding pro... 195 1e-48 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 195 1e-48 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 195 1e-48 UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional... 195 1e-48 UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding... 195 1e-48 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 195 2e-48 UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional... 195 2e-48 UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional... 195 2e-48 UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea D... 194 3e-48 UniRef50_A6DJR9 Periplasmic binding protein/LacI transcriptional... 194 3e-48 UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional... 194 3e-48 UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional... 194 4e-48 UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional... 193 5e-48 UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional... 193 5e-48 UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribos... 193 6e-48 UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcri... 193 6e-48 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 193 6e-48 UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 193 6e-48 UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional... 193 7e-48 UniRef50_C3RC01 ABC-type sugar transport system n=5 Tax=Bacteroi... 193 7e-48 UniRef50_B5K960 ABC transporter, periplasmic sugar binding prote... 193 7e-48 UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminoc... 193 7e-48 UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional... 193 8e-48 UniRef50_B2JDH5 Periplasmic binding protein/LacI transcriptional... 193 8e-48 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 193 8e-48 UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional... 192 1e-47 UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional... 192 1e-47 UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional... 192 1e-47 UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette tran... 192 1e-47 UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional... 192 1e-47 UniRef50_B2SY92 Periplasmic binding protein/LacI transcriptional... 192 2e-47 UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional... 192 2e-47 UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding... 192 2e-47 UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional... 192 2e-47 UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alph... 191 2e-47 UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional... 191 2e-47 UniRef50_Q1M6L8 Putative substrate-binding component of ABC tran... 191 3e-47 UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 191 3e-47 UniRef50_C5EI71 Predicted protein n=1 Tax=Clostridiales bacteriu... 191 3e-47 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 191 3e-47 UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Br... 191 3e-47 UniRef50_Q21X74 Periplasmic binding protein/LacI transcriptional... 191 3e-47 UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional... 191 3e-47 UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional... 190 5e-47 UniRef50_A3DI69 ABC-type sugar transport system periplasmic comp... 190 5e-47 UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional... 190 6e-47 UniRef50_Q2S7D2 ABC-type sugar transport system, periplasmic com... 190 6e-47 UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Ta... 190 8e-47 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 189 8e-47 UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional... 189 9e-47 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 189 9e-47 UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacte... 189 1e-46 UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasm... 188 2e-46 UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional... 188 2e-46 UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding... 188 2e-46 UniRef50_C6C3I7 Periplasmic binding protein/LacI transcriptional... 188 2e-46 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 188 2e-46 UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor h... 188 2e-46 UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curviba... 188 3e-46 UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales Rep... 187 3e-46 UniRef50_C2AKV1 Monosaccharide ABC transporter substrate-binding... 187 3e-46 UniRef50_D2QME7 Two component transcriptional regulator, AraC fa... 187 4e-46 UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 187 4e-46 UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostri... 187 5e-46 UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional... 186 7e-46 UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional... 186 8e-46 UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=... 186 8e-46 UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional... 186 9e-46 UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostri... 186 1e-45 UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea l... 186 1e-45 UniRef50_UPI0001C31E06 ribose ABC transporter, substrate binding... 186 1e-45 UniRef50_C6CWF6 Periplasmic binding protein/LacI transcriptional... 185 1e-45 UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 T... 185 1e-45 UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI fa... 185 2e-45 UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 1820... 185 2e-45 UniRef50_A9KMR5 Putative solute-binding component of ABC transpo... 185 2e-45 UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostri... 185 2e-45 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 184 3e-45 UniRef50_UPI0001973330 periplasmic binding protein/LacI transcri... 184 3e-45 UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n... 184 4e-45 UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales b... 184 4e-45 UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-bindin... 183 5e-45 UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protei... 183 5e-45 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 183 5e-45 UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=P... 183 5e-45 UniRef50_A8FI27 Sugar ABC superfamily ATP binding cassette trans... 183 6e-45 Sequences not found previously or not previously below threshold: >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF Sbjct: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD Sbjct: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE Sbjct: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK Sbjct: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE Sbjct: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 Query: 301 FKLVDSILVTQ 311 FKLVDSILVTQ Sbjct: 301 FKLVDSILVTQ 311 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 228/311 (73%), Positives = 264/311 (84%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M ++ S + ++ + + +AEYAV+LKTLSNPFWV MK+GIE+EAK LGV VDIF Sbjct: 1 MKRFKTLKSCLAILGLVCSVSVYSAEYAVILKTLSNPFWVAMKEGIENEAKALGVDVDIF 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ASPSEGD+QSQLQLFEDL NKNYKGIAFAPLS NLVMP A+A++KGIYLVNLDEKID+ Sbjct: 61 ASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDIK 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 NL+KA GNVEAF+TTDNVAVG K A FI+DKLG+EGGEVAIIEGKAGNASGEARR GA E Sbjct: 121 NLQKAKGNVEAFITTDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGARE 180 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 F K+S IKLVASQPADWDRIKALDVATNVL RNPN+KA Y ANDTMAMGVAQAV NAGK Sbjct: 181 VFVKSSSIKLVASQPADWDRIKALDVATNVLSRNPNLKAFYVANDTMAMGVAQAVINAGK 240 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 GK+LVVGTDG+PEARKMV ++TAT+AQ+PA IGA GLKL+VDA ++GK IP+D P+ Sbjct: 241 QGKILVVGTDGVPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGKQIPVDVEPK 300 Query: 301 FKLVDSILVTQ 311 + VDSIL++Q Sbjct: 301 IETVDSILISQ 311 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 293 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 184/291 (63%), Positives = 224/291 (76%), Gaps = 1/291 (0%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A AE A+VLKTLSNPFWV+MK+GIE EA G+ VDI A+ SE D Q QL+L E+L + Sbjct: 41 AEGQAEIAIVLKTLSNPFWVEMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLS 100 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K YK I APLS VN + + A KKGIY+VN+DEK+DM+ LKK+GG+V AFVTTDNV V Sbjct: 101 KGYKAIGIAPLSPVNTIPAIVEANKKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKV 160 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 GAKGA +II KL EGGEVAIIEGK+GNASGE RR GATEAFK S+ KLVASQPADWDR Sbjct: 161 GAKGAEYIIGKL-PEGGEVAIIEGKSGNASGEFRRQGATEAFKADSKFKLVASQPADWDR 219 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 KALDVA N++Q+ PN+KAIY NDTMA+G QAVANAGKTG++LVVGTDG PEAR ++ Sbjct: 220 SKALDVAANLIQKYPNLKAIYACNDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSID 279 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 G++ ATVAQ+PA IGAT LK++++A K I D + V+S L+++ Sbjct: 280 EGKLNATVAQDPAMIGATSLKILIEAIKDKPQISPDIEAKEVPVESNLISK 330 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 89/274 (32%), Positives = 148/274 (54%), Gaps = 14/274 (5%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + V L TL+NPF+V +++G+E+ A V I + ++ D +Q EDL + Sbjct: 51 KIGVSLSTLNNPFFVSIREGVEEAAGKENVETVI--TDAQNDSSTQNNQVEDLITQGVDL 108 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I P+ S + V +A + I ++ +D D G + +F+ ++NV G Sbjct: 109 IVINPVDSTAIATSVEKANEANIPVICVDRGSDQ-------GELVSFIASNNVEGGKLAG 161 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +I++K+G E EV +EG G +S R G EA +I L+ASQ A++DR + + Sbjct: 162 EYILEKVG-ENAEVIQLEGIPGASSTRERGEGFEEA--TNGKINLLASQTANFDRAEGMT 218 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 V N+LQ +P++KA++C ND MA+G ++A+ +GK V +VG DG +A K VE G ++ Sbjct: 219 VMENLLQAHPDVKAVFCQNDEMALGASEAIKASGK--DVTIVGFDGNEDAIKAVEEGNLS 276 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 ATVAQ P ++G ++ + K +V +P Sbjct: 277 ATVAQKPKEMGKLAIETAIKYLKGEEVEETVDSP 310 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 11/283 (3%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 T++ + + TL+NPF+V M G+++EAK LGV V I D +QL E Sbjct: 37 TGTASTKPIKLGFAVSTLNNPFFVAMSNGVQEEAKKLGVQVTILNGN--NDPATQLNQVE 94 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 DL ++ I P S +L V +A + I ++ LD + GNV F+ ++ Sbjct: 95 DLIQQHVNAIILNPTDSQSLSTAVEQANRAHIPVITLDRSV-------TKGNVACFIASN 147 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 +V G A +I LG +G +V ++G G ++ R G E KA I++VA Q A Sbjct: 148 SVEAGKMAADELIKALGGKG-QVVELQGVIGTSAEADREKGFDEEIGKAPGIRVVARQTA 206 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 ++DR +AL+V N+LQ +PNI+ ++ ND MA+G +A+ AGK + +VG DG EA Sbjct: 207 NFDRSQALNVMQNILQAHPNIQGVFAQNDEMALGALKAIQEAGK-HNIKIVGIDGEKEAV 265 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 V G + A +AQ P G G++ V + KV +P Sbjct: 266 NDVHKGLLYADIAQQPVQEGILGVEYAVKLVEGEKVPKQVNSP 308 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 27/312 (8%) Query: 1 MNK----YLKYFSGTLVGLMLSTSAFAAA---------EYAVVLKTLSNPFWVDMKKGIE 47 M K L L L +A + + TL+NPF+V +KKGIE Sbjct: 1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIE 60 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 EAK G+ V I ++ D Q EDL + + P S + V A G Sbjct: 61 KEAKKRGMKVIIV--DAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVG 118 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 + +V +D + G VE V +DNV G A+FI DKLG +G +VA +EG G Sbjct: 119 VPVVTIDRSAEQ-------GKVETLVASDNVKGGEMAAAFIADKLG-KGAKVAELEGVPG 170 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 ++ R +G + ++++V Q AD+DR K L V N+LQ +P+I+A++ ND M Sbjct: 171 ASATRERGSGFHNIADQ--KLQVVTKQSADFDRTKGLTVMENLLQGHPDIQAVFAHNDEM 228 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 A+G +A+ ++GK +LV+G DG +A ++ +++ATVAQ P IG + D Sbjct: 229 ALGALEAINSSGK--DILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDIL 286 Query: 288 KSGKVIPLDKAP 299 KV AP Sbjct: 287 HGKKVQKTISAP 298 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 104/312 (33%), Positives = 156/312 (50%), Gaps = 28/312 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA-------------EYAVVLKTLSNPFWVDMKKGIE 47 M K L F+ L L LS + + + + TL NPF+V +K G+ Sbjct: 1 MKKTLTVFTA-LALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVV 59 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 EAK G+ V + ++ D Q EDL + + P S + V A G Sbjct: 60 KEAKKQGIEVIVV--DAQDDSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLG 117 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I +V LD + G VE V +DNV G A FI+++LG +G +VA +EG G Sbjct: 118 IPVVTLDRSAE-------NGKVETLVASDNVKGGQMAADFIVEQLG-KGAKVAELEGVPG 169 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 ++ R +G + ++ ++A Q AD+DR K L+V N+LQ NP+I+A++ ND M Sbjct: 170 ASATRERGSGFHKTADD--KLNVIAKQTADFDRTKGLNVMENLLQGNPDIQAVFAHNDEM 227 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 A+G +A+ ++GK ++LVVG DG +A K V+AG M+AT+AQ P IG ++ D Sbjct: 228 ALGAIEAIRSSGK--EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDIL 285 Query: 288 KSGKVIPLDKAP 299 KV AP Sbjct: 286 NGKKVEKTIPAP 297 >UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH1_9FIRM Length = 356 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 142/290 (48%), Positives = 195/290 (67%), Gaps = 2/290 (0%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 + +YAV+LKT + FWV M KG+E E GV VD++++ SE D + QL + E Sbjct: 61 GVSDKKYAVILKTQATDFWVKMWKGVEAETAVKGVKVDLYSAQSEDDLEGQLTILESCIQ 120 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + Y GIA APLS VN++ + A KGI +V++DEK D L GG AFV TDNVAV Sbjct: 121 QGYDGIAIAPLSGVNVLPGIGEATAKGITIVDVDEKFDETELANQGGACVAFVATDNVAV 180 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 GAKGA +I+D G EG +VAIIEGK+GN S E R GA +AF ++ +++SQ ADWDR Sbjct: 181 GAKGAQYIVDTAG-EGAKVAIIEGKSGNQSSEDRTQGAKQAFTD-GKMDIISSQAADWDR 238 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 KA+D+A+ ++Q+NP++K IYC ND MA+G QAV NA K G++++VGTDG EA + Sbjct: 239 QKAMDIASTLIQQNPDLKGIYCCNDGMALGAVQAVINANKLGEIMIVGTDGDAEAVSSIA 298 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 +++ATVAQ+PA IGAT L L+++A +SGK + PE V+S+LVT Sbjct: 299 NNELSATVAQDPAQIGATSLDLLIEAVESGKKGEVGTFPEKTPVESVLVT 348 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 158/304 (51%), Gaps = 13/304 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S L+ +S A A A+V+ TL+NPF+V MK G E AK LG ++ + Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIVL 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +L EDL+ + K I P S + + A + I ++ LD Sbjct: 61 --DSQNDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASR- 117 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 G+V + + +DNV G +FI++K+G + +V +EG AG ++ R G Sbjct: 118 ------GDVVSHIASDNVVGGEMAGNFIVEKVGEK-AKVIQLEGIAGTSAARERGEGFMN 170 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K S ++L+ASQPAD+DR K L+V N+L NP+++A++ ND MA+G +A+ +GK Sbjct: 171 AVK-GSHMELLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK 229 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 +V++VG DG + V G++ AT+AQ P IGA G++ K +V P Sbjct: 230 --EVMIVGFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQVEDYIPVPL 287 Query: 301 FKLV 304 + Sbjct: 288 KVVT 291 >UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGH9_9FIRM Length = 288 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 148/286 (51%), Positives = 200/286 (69%), Gaps = 5/286 (1%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN-YKGIA 87 +VLKTLSNPFWVDM GI+ EA+ LGV+ DIFA +E D QL+ ED N Y G+ Sbjct: 1 MVLKTLSNPFWVDMADGIQAEAEKLGVTADIFAVDAETDIDGQLKKCEDAINSGSYDGLG 60 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP+++ NL+ V A +KG+ +VN+D KID D LK+AGG V F T+DN VGA GA + Sbjct: 61 VAPITATNLISAVVAANQKGMPVVNIDAKIDEDALKEAGGYVVGFATSDNHKVGAIGAQY 120 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK--ASQIKLVASQPADWDRIKALD 205 I+++L +GG+VAIIEG+AG+ SGE RR+G E + + + ++V QPADWDR KALD Sbjct: 121 IMEQL-PDGGKVAIIEGRAGDLSGELRRDGCKETLEADGSGKYQVVDVQPADWDRQKALD 179 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 VATN++ + P++ A + ANDTMA+GV QA+AN G TGK+L+VGTD E ++ ++AG M Sbjct: 180 VATNIITKTPDLNAFFVANDTMALGVMQAIANTGNTGKILLVGTDASDETKEAIKAGNMV 239 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A V Q+PA IGAT L ++VDA K+G+ D KLVD+ LVT+ Sbjct: 240 A-VCQDPAAIGATCLDILVDAIKAGETGSPDYEAVSKLVDANLVTK 284 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 2/290 (0%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 K + FS + L A + A+++KTLSN +++ M++G E+ AK + + + + Sbjct: 7 KNIFKFSALISALPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQVA 66 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 E + + L E++ K I P S+ + +A K GI +++LD ++D Sbjct: 67 EKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKAA 126 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 + AG +V DN G A + + +G +G VAI+EG G +GE R+ GA +AF Sbjct: 127 EAAGLKFN-YVGVDNFNGGYLEAKNLAEAIGKKG-NVAILEGIPGVDNGEQRKGGALKAF 184 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 + IK+VASQ A+W+ +AL V TN+L NPNI I+ AND MA+G AV NAG G Sbjct: 185 AEYPDIKIVASQSANWETEQALTVTTNILTANPNINGIFAANDNMAIGAVTAVENAGLAG 244 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 KVLV G DGIP A + V+ G+M T+ Q P A ++ + ++ Sbjct: 245 KVLVSGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAIAIEHALKQINKQEI 294 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 145/285 (50%), Gaps = 16/285 (5%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 + + T +NPF+VD+K G++ A G+ +++ + ++ D Q++ E+L K I Sbjct: 68 IGLAMNTQTNPFFVDVKDGVQKAADEHGI--ELYITDAQDDPTIQMKDVENLITKKPDAI 125 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 S +V + + GI + +D + + GG V + + D + G Sbjct: 126 IIDTCDSDAIVSSIEACNEAGIPVFTMDREAN-------GGEVISHIGYDAIKSGRMAGQ 178 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +++D LG +G ++ I+G G + R G E K +++VA Q AD+DR K + V Sbjct: 179 YLVDTLGGKG-KIVEIQGIMGTNVAQNRSQGFNEVMKDNPDMEIVACQVADFDRAKGMSV 237 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N+LQ NP I +Y AND M +G +A+ AG+T +++ +G D I + ++AG++ A Sbjct: 238 MENILQANPEIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAMKAGKVDA 297 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 T+A+ P +G L D + +V P + ++D+ LVTQ Sbjct: 298 TIAEPPFFLGKAILNTAYDYLEGKQVEP------YVILDNQLVTQ 336 >UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS39_9DEIN Length = 320 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 118/309 (38%), Positives = 183/309 (59%), Gaps = 5/309 (1%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 + L + L L T FA A ++KT +NPFW M+ GI D A+ V++ + A Sbjct: 2 RLLTASTAVLAALAWGTLGFAQQLTIAALMKTTANPFWGAMEAGIRDAAQKGNVNLILQA 61 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 SE D + QL +L + + + A ++SVNL+ + +A ++ I +V+LD +D Sbjct: 62 VASETDVEPQLNACLNLLQRKPQALVVAAINSVNLLPCLKQANQQNIPIVDLDGNLDPAV 121 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE-GGEVAIIEGKAGNASGEARRNGATE 180 L++ G + +++DN GA A +++ KLG G+V +IEG AGN +G ARR+G TE Sbjct: 122 LQREGVKIAFSISSDNRRAGASAAEYVVSKLGQGFSGKVLVIEGLAGNVTGAARRDGFTE 181 Query: 181 AFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 K+ A ++VA+ P DWDR+KA ++ + LQR+P++ AIYCANDTMA+G +AV AG Sbjct: 182 RLKQIAPNAQIVATLPGDWDRLKAANITNDTLQRHPDLAAIYCANDTMALGAVEAVFAAG 241 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 K KVLVVGTDG +A K + AG++ A+VAQ P +G+ ++ ++ K +V P P Sbjct: 242 K--KVLVVGTDGNSDAVKSIRAGRLNASVAQLPFLVGSRAIENVLKVIKGEQVDPKIIVP 299 Query: 300 EFKLVDSIL 308 + +IL Sbjct: 300 TLVIDKAIL 308 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S L+ +S A A A+VL TL+NPF+V MK G E +AK LG ++ + Sbjct: 3 MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVL 62 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +L EDL+ + K I P S + + A + I ++ LD Sbjct: 63 --DSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASR- 119 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 G V + + +DNV G FI K+G++ +V +EG AG ++ R G Sbjct: 120 ------GEVVSHIASDNVVGGEMAGHFIEAKIGSD-AKVIQLEGIAGTSAARERGEGFMN 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K S+++L+ASQPAD+DR K L+V N+L NP+++A++ ND MA+G +A+ +GK Sbjct: 173 AVK-GSKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK 231 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + V++VG DG + VE GQ+ ATVAQ P IGA G++ K KV Sbjct: 232 S--VMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKV 281 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 155/293 (52%), Gaps = 8/293 (2%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 +A A + A+V+KTL+NPF+++M+KG K LG+ + + + E + Q+Q+ ED Sbjct: 42 PDAAPNARKIALVMKTLTNPFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIED 101 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 L + I AP S+ LV + A + GI ++N+D ++D + +K G F++ DN Sbjct: 102 LIRMKFDAIVIAPGDSLRLVPVLKAAQEAGIRIINIDNRLDAEAMKGQGMAPVPFISVDN 161 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 + A FI ++ + + AI+EG + RR GA AF++ I+LVA + A+ Sbjct: 162 EKAAYESAGFIAREI-HKPAQAAILEGIRSADNSRQRRVGAERAFRENPLIRLVARESAN 220 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W + DV + +P+I ++CAND MA+G Q + +G+ G V V D + EA++ Sbjct: 221 WKIDEGRDVTRRLFSDHPDITLLFCANDMMALGAIQFLQESGRYG-VKVAAYDALEEAKR 279 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + +G+M TV Q A+ G G+ L V PE LV++ LVT Sbjct: 280 AILSGRMEVTVNQQAAEQGYQGIILASRVLNGEAV------PEVVLVETSLVT 326 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 11/285 (3%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 AVVLK L++ +W ++ G D AK LGV V + +E D Q L ED K + Sbjct: 41 VAVVLKALNSDYWKTVQAGANDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDAL 100 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 APL + +A K+ I +V +D + D K +FV T N+A G G Sbjct: 101 VVAPLQPNAAITTFDKAEKEKIPVVLIDTDANWDKKK-------SFVGTGNIAAGKLGGE 153 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +I KL +G E II G G+ + + R GA +A + A IK+V QPA+ +R KA+ V Sbjct: 154 YISKKL-KKGDEAIIIRGVPGDRTQDERTQGAQKALEAA-GIKVVEIQPANSEREKAISV 211 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N+LQ +PNIK ++C ND MA+G +A+ AGK ++ +G DG P+A K ++ G +T Sbjct: 212 MENLLQTHPNIKGVFCTNDEMALGAVKALQQAGKKN-IISIGVDGSPDALKSIKEGGLTG 270 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 TVAQN DIG G++ V + KV LVD V + Sbjct: 271 TVAQNSYDIGKKGVETAVKVLRGEKVE-TRIDTGTTLVDKQNVNE 314 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 154/299 (51%), Gaps = 13/299 (4%) Query: 7 YFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEG 66 VG + + +V+ TL+NPF+V +K+G E ++K LG + + S+ Sbjct: 16 LLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVL--DSQN 73 Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 D + EDL + P S ++ V A K I ++ +D + + G Sbjct: 74 DPAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQAN-------G 126 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGAEGG-EVAIIEGKAGNASGEARRNGATEAFKKA 185 G V + + +DN+ G +SFIID+L + +V ++G G ++ R G K Sbjct: 127 GEVVSHIASDNIKGGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDKK 186 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 S +KL++SQ A++DR + L V N++Q + A++ ND MA+G A+A+ A K K++ Sbjct: 187 SNLKLISSQAANFDRAQGLSVMENIIQAQSDFDAVFAHNDEMALGAAKALKTANK--KII 244 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 VVG DG +A+ +E +++ATVAQ PA +G+T ++ V +G+ I + + +L+ Sbjct: 245 VVGFDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVK-ISNGQNISKNIPVKLRLI 302 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 102/314 (32%), Positives = 151/314 (48%), Gaps = 26/314 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE---------------YAVVLKTLSNPFWVDMKKG 45 M+K +K + ++ + E + + T SNPF+V +KKG Sbjct: 1 MSKLMKSLMAGALVFAVAACSKQGPETAQAPDAGTDGGKPAIGLAVSTQSNPFFVTLKKG 60 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 E+EA+ G + + ++ D Q+ EDL K K I P S +V V A Sbjct: 61 AEEEAQKQG--LTLITVDAQDDPAKQIASIEDLIQKKVKVILVNPTDSDAVVGAVKAANA 118 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 GI +V LD ++ GG V + V +DNVA G A ++++K+G +G +V +EG Sbjct: 119 AGIPVVTLDRSVN-------GGEVASHVASDNVAGGKMAAEYLLEKIGNQG-DVVELEGI 170 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 G ++ R G + +A +K+V QPAD+DR K L V N+LQ N N+K ++ ND Sbjct: 171 PGASAARERGQGFHDVIDQAKDVKVVGRQPADFDRAKGLSVMENILQANKNVKGVFAHND 230 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 MA+G QA+ AG V VVG D +A V+AG+M+ATVAQ P IG T + Sbjct: 231 EMALGAVQALEAAG-MKDVTVVGFDATDDAVNAVKAGKMSATVAQKPKLIGKTAVDAAKK 289 Query: 286 AEKSGKVIPLDKAP 299 V P Sbjct: 290 IIDGQPVDKSLPVP 303 >UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Streptomyces RepID=B4UZK6_9ACTO Length = 322 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 164/288 (56%), Gaps = 4/288 (1%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A+ A+V + +NP+W ++ G E K GV V++ A SE D + L+ + Y Sbjct: 19 EAKIAIVTRNFTNPYWAALRDGAIAEGKKQGVKVEVQAGASETDSTGENAKISTLAGQGY 78 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 P+++ N++ P+ ++ I ++NLD +ID + K+AG + +F+ +DN++ G + Sbjct: 79 NCFGVVPVNATNVITPLVPVAQRKIPILNLDTQIDANASKQAGVSYASFIGSDNLSAGQQ 138 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 ++ +G +G EVAI++G AG +G R+ G TE K A ++ +VA+QPAD+D+ K Sbjct: 139 AGEGLLKLMGGKG-EVAILQGIAGEQNGINRQKGFTE--KVAGKLDIVATQPADYDQAKG 195 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 V +L+ +P I I+ ANDTM +G AQAV NAG TGKV ++ DGI A + V+AG Sbjct: 196 QTVTEAILKAHPKITGIFAANDTMGLGAAQAVRNAGLTGKVSIISVDGISAALEAVKAGT 255 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ T++Q P G ++ +D + K +P L+DS V + Sbjct: 256 LSGTISQYPYAEGQLAVQACIDLV-AKKKVPSRIVAPIALIDSTNVDK 302 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 149/299 (49%), Gaps = 18/299 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFA-----AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 MN K FS L+ +ML TS + +VL TL+NPF+V+MK G E EA+ LG Sbjct: 1 MNINKKIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGY 60 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + + S+ D + EDL + P S +V V A K I ++ LD Sbjct: 61 DLVVL--DSQNDPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDR 118 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG--EVAIIEGKAGNASGEA 173 + + GG + + + +DN+ G A +++DK E G V I+G G ++ Sbjct: 119 QAN-------GGKITSHIASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRD 171 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQ 233 R G K + ++ Q AD+DR K L V N++Q NPNI+ ++ ND MA+G + Sbjct: 172 RGEGFHNIMDKNDKFNFISIQAADFDRQKGLQVMENIIQANPNIQVVFAHNDEMALGAVK 231 Query: 234 AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 A+ +G LV+G DG +A+ ++A +MTA +AQ P IGA G++L K + Sbjct: 232 AIKASGINA--LVIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESI 288 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 7/267 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 +AV+ K ++ FW +K G E + +G + E D Q+ + + N G Sbjct: 143 HFAVIPKGTTHIFWQSVKHGAEQAGEEIGAKITFRGPSKENDRDEQINVVQGFLNARVDG 202 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I APL + LV PV A + G+ +V D ++ D G+ ++V TDN G Sbjct: 203 ILLAPLDADALVRPVKEASRAGVPVVIFDSGLNTD-----PGDFVSYVATDNFEGGKLAG 257 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLV-ASQPADWDRIKAL 204 + + LG +GG+V ++ + G+ S R G + + S I+++ + Q A A+ Sbjct: 258 EAMANALGEKGGDVILLRYEQGSESTHQREEGFLYSIAEYSNIRVLSSDQYAGTTTESAI 317 Query: 205 DVATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D A +L R + I + A G +A+ GKV +V D R+ + AG+ Sbjct: 318 DKAQALLNRFGDEADGICTVCEPTAEGALRALRERKLAGKVKLVTFDSSDSLRESLSAGE 377 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSG 290 + A V Q+P +G +K M + Sbjct: 378 VNAIVLQDPVAMGYQAVKTMAAHLRGE 404 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 13/295 (4%) Query: 21 AFAAAEYAVVLKTLS--NPFWVDMKKGIEDEAKTLG-VSVDIFASPSEGDFQSQLQLFED 77 A + +Y +VL T+ + W+ +K G E +AK LG V + A + D Q+++ ED Sbjct: 43 ASSEKKYNIVLITMDSMDEHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMED 102 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 N+ I AP L V +A+ GI ++ +D + D +FV TDN Sbjct: 103 AINQKADAILIAPTDQTALTPVVEKAFDAGIPVILIDSPVKTD-------KYVSFVATDN 155 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPA 196 + A + + LG +G ++AII + G+ + R NG + K K I+++ +Q + Sbjct: 156 IKAAEMAADKLGELLGGKG-KIAIISAQPGSGTTIMRENGFKDRLKEKYPDIQIITTQYS 214 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 D+ +AL+ A ++L +P++ Y N+ +G+A A+ GKV VVG D Sbjct: 215 MGDKNRALNQALDILTAHPDLAGFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQATI 274 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ + A++ QNP +G G+++ VD + GK +P ++ V + Sbjct: 275 NAIKENYIQASMVQNPYMMGYKGVEIAVDKLQ-GKEVPKRVDTGVTVMTKDNVDE 328 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 21/323 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA------EYAVVLKTLSNPFWVDMKKGIEDEAKTLG 54 M K L + L++S + A + A+V+ TL+NP++V + + + A+ LG Sbjct: 4 MKKSLFVVLVLVGLLLVSFTGLAQEQQKPKGKMAIVISTLNNPWFVVLAETAKQRAEQLG 63 Query: 55 VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 114 IF S+ D + F+ + Y I F P + + V RA + GI + +D Sbjct: 64 YEATIF--DSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVD 121 Query: 115 EKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG-----AEGGEVAIIEGKAGNA 169 I+ A G A + +DN G + + L A+ A + G Sbjct: 122 RGIN------ARGLAVAQIYSDNYYGGVLMGEYFVKFLKEKYPDAKEIPYAELLGILSAQ 175 Query: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 R NG + + K+VA Q A++DR A V +LQ +P IKAI+C ND MA+ Sbjct: 176 PTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQILQAHPEIKAIWCGNDAMAL 235 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEK 288 G +A AG+T + + G DG + ++ G+ + AT+ Q P + ++ + Sbjct: 236 GAMKACEAAGRT-DIYIFGFDGAEDVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLR 294 Query: 289 SGKVIPLDKAPEFKLVDSILVTQ 311 + P +LV + + Sbjct: 295 GERSFPEIVPVTVELVTRENIDK 317 >UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX36_HERA2 Length = 335 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 147/289 (50%), Gaps = 5/289 (1%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS-- 62 L GT +ST+ + +V+K+LSN F+ M+ G E+ A+ D A+ Sbjct: 33 LLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQNATRFDFTATGI 92 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 E DF +Q+ FE L N+ Y I AP S+ LV PVA+A K GI ++N+D +D Sbjct: 93 NDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVALDEATK 152 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 K AG ++ AF DN A + LGA GG+VA++EG + RR G +A Sbjct: 153 KAAGIDL-AFFGPDNRAGAKMSGEVLAKALGA-GGKVAVLEGNPEADNAVQRRLGFDDAI 210 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 S + LV ++ W+ + + L++ P+++ I CAND+MA G QA+ A Sbjct: 211 ADGS-LNLVVAESGHWETSEGQSITAAWLKKYPDLQGIMCANDSMAFGAVQALEAANLLD 269 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK 291 K+ VVG D IP + +++ G+M ATV Q A + A G+ K K Sbjct: 270 KIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEK 318 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 139/279 (49%), Gaps = 14/279 (5%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + V L TLSNPF+V ++ GI+D AK ++ S ++ D Q EDL Sbjct: 44 APKDLKVGVSLSTLSNPFFVSVRNGIQDLAKKN--KTNVQVSDAQNDTAKQNSNIEDLIQ 101 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K + P+ S + V A GI ++ +D D GG V V +++ Sbjct: 102 KKVDVLIINPVDSSAITPAVKDANDAGIPVITVDRSSD-------GGKVLTLVASNSTKG 154 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G A ++I+KLG + ++A ++G G ++ R G A K ++ +V+ Q A +DR Sbjct: 155 GQMAAKYMIEKLGKD-AKIAELQGIPGASATRERGKGFDGAAK--GKLDIVSKQTAGFDR 211 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 K L V N+LQ N +I I+ ND MA+G QAV AGK K+ +VG DG + K V+ Sbjct: 212 AKGLTVTENILQGNGDIVGIFSQNDEMALGAVQAVKAAGK--KITIVGFDGEADGIKAVK 269 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 AG M ATVAQ P ++G L+ D V ++P Sbjct: 270 AGDMAATVAQKPEEMGRLALQAAYDHFNGKTVKKNVESP 308 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 102/311 (32%), Positives = 160/311 (51%), Gaps = 19/311 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKT--LSNPFWVDMKKGIEDEAKTLGVSVDIF 60 K +K F + + +++ T AFA + +K NPFW +++G ++A LGV + + Sbjct: 2 KLVKLFLASSLAIIIGTLAFA-DTVLLSMKGPGAGNPFWASVERGAREKAAELGVKIVVL 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + P E D QSQ+ ED K IA A L + A GI +V +D K Sbjct: 61 SPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTK---- 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 F+ TDN A A FI D++ + G +VAI++G ++G+AR +GA Sbjct: 117 ----GINKGVTFIGTDNKAGAKMAADFICDRV-SRGSDVAILQGIITQSTGKARADGAHA 171 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 K + +VA QPA+WDR + V N+L RN +KA++ +ND MA+G +A+ +A Sbjct: 172 GLKGC-GLNIVAEQPANWDRAQGRTVMENILTRNQKLKAVFASNDNMALGAVEALKDADM 230 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 V+VVG D P+A K + AG+MTAT+AQ ++GA G++ ++ K P Sbjct: 231 LNDVIVVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKG------RSLPP 284 Query: 301 FKLVDSILVTQ 311 ++LVT+ Sbjct: 285 VVDTGTLLVTK 295 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 86/270 (31%), Positives = 142/270 (52%), Gaps = 8/270 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF--ASPSEGDFQSQLQLFEDLSNKNY 83 E AVV K + FW +++G AK VD+ E D Q+ L ++ + Sbjct: 44 ELAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQGV 103 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 G+ +A + L +A +GI +VN+D D NV F TDNVA + Sbjct: 104 DGLVYAATDAKVLHDVTQQALDQGITVVNIDSGTDPQPE-----NVPVF-ATDNVAAAER 157 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 +++++LG +GG+VA I + G A+ + R G K+ Q+KLVA Q ++ + +A Sbjct: 158 ATEYLVEQLGEDGGKVAFIPFQPGTATNDTRTEGFKNVLKENPQVKLVAEQSSESNYNRA 217 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 L V ++L +P++ AIY AN+ +G A+AV +AGK G++++VG D P+ K V G Sbjct: 218 LQVTEDILTAHPDLDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREGV 277 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVI 293 ++A +AQNP +G G+ V ++G+ + Sbjct: 278 VSALIAQNPFRMGYDGVNAAVKMIRTGEQV 307 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 9/285 (3%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 L + + ++ G+++ KT V++ + D QL E+ + I Sbjct: 59 IGAALPDFDDKWLSYLQDGMKEYEKTQK-DVEVIYVDAMNDASKQLSQVENFIQQKVDAI 117 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+ +V+ V +A + I +V ++ D + A+V ++++ G Sbjct: 118 VLIPVDTVSAPEMVDKANQANIPIVVVNRIFDGVD------KATAYVGSESIKAGIMQME 171 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 + L +G ++AI+ G+ G+ + R G + KK +K+V A+WDR K + + Sbjct: 172 EVAKLLNGKG-KIAIMNGQMGHEAQIKRTEGNKQVIKKYPDMKVVLEGTAEWDRAKGMSL 230 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N LQ I A+ C ND MA+G A+ + GK V+V G D P+A + V+ G++ Sbjct: 231 MENWLQSGKKIDAVVCNNDEMAIGAIMALEDEGKLDDVIVAGVDATPDALEYVKEGKLKV 290 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 TV QN G GL++ + A K KV + P ++LV V + Sbjct: 291 TVFQNAKGQGQLGLEVAIKAAKGEKVEKFNWIP-YELVTKDNVEE 334 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 35/330 (10%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF-----------------AAAEYAVVLKTLSNPFWVDMK 43 M K K + L L++ ++ + L +LSN F++ M+ Sbjct: 1 MKKTKKILAVLLSTLLIGSAILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGME 60 Query: 44 KGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARA 103 KG++D+ +G + + + GD QL EDL K + L + +V V +A Sbjct: 61 KGVKDKTSEIGCKL--IETNANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVKKA 118 Query: 104 WKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG---GEVA 160 + I ++ LD + +++ F+ TDNV +G + A I+ L +G G V Sbjct: 119 KEANIPIIFLDRGANSEDM-------TTFLETDNVKMGEQAAELILKALKDKGLNGGNVV 171 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 IEG G ++ R G K ++K+VA Q D+++ K+++V N+LQ NP I A+ Sbjct: 172 EIEGLQGTSAARDRGKGFHNVMDKHKEVKIVAKQAGDFNQEKSMNVMQNILQANPKIDAV 231 Query: 221 YCANDTMAMGVAQAV------ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 + ND +G +A+ AG + VVG DGI +A + V+ G + +++Q+P Sbjct: 232 FGHNDDCTVGAEKAIIASNRMKPAGDKEHIFVVGIDGINQAIESVKKGNIDVSISQDPIG 291 Query: 275 IGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 +G +++ + A K +V F + Sbjct: 292 MGVQAVEVGLKAIKGEQVEKHIYTKFFPIT 321 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 31/326 (9%) Query: 1 MNKYLKY---FSGTL----------VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIE 47 M K L + F+ L G S ++ + +V K + FW ++ G + Sbjct: 1 MKKLLLFLVVFAAVLSCGKSEDKKDAGAGKSANSGDKIKIELVSKGYQHEFWRSVEAGAK 60 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 + LGV V+ E + Q+ + E+ NK + A L L + +A Sbjct: 61 KAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGIAALDPDALAVVAKKAMDAK 120 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I +V D + G +F+ TDN GA + + +G +VAI+ G Sbjct: 121 IPVVTFDSNVK-------GDITSSFIATDNKVAGAMAGEQLAKLINGKG-KVAIVSHNPG 172 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 + R G EA K IK++ +Q +D D+ KAL + +++ NP+I IY N+ Sbjct: 173 TTTAIEREAGFREALAKYPDIKILNTQFSDGDKSKALAITLDIINANPDIAGIYGTNEPS 232 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 G+A+ V G TGKV++VG D + K +E G ++ V Q+P ++G ++ + Sbjct: 233 IFGIAKGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLVIQDPYNMGYQTVQQLYKLS 292 Query: 288 KSGKVIPLDKAPEFKLVDS--ILVTQ 311 K KV K +D+ ILVT+ Sbjct: 293 KGEKV--------EKRIDTGAILVTK 310 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 142/273 (52%), Gaps = 5/273 (1%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG-VSVDIFASPSEGDFQSQLQLFED 77 +A +++K+L+N F+ +M G E A+ G + +E DF+SQ+ E+ Sbjct: 58 AAAQDQPTVGLIMKSLANEFFQNMMVGAEAHAEERGDYELLAVGMQNETDFESQINAVEN 117 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 + I AP S +V P+ RA + GI ++N D +D +++ G + AFV DN Sbjct: 118 FITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVALDTGAMEQQGIEL-AFVGPDN 176 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 + + + LG EGG V IIEG G + RR G +A ++L+ S+ A Sbjct: 177 RMGAEMAGNALGEALG-EGGRVVIIEGNPGADNATQRRLGFEDAIATH-GLELLESRTAH 234 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W+ +A V +L +P+++ + AND+MA+GV +A+ AG+ +LVVG D +P Sbjct: 235 WETEEANQVFAAMLTAHPDLQGVMAANDSMAIGVIEALDAAGR-DDILVVGFDAVPAVLP 293 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 M+E G+M ATV Q + A + L ++ ++G Sbjct: 294 MIEDGRMLATVDQFGQAMAANAIDLALEVLETG 326 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 85/285 (29%), Positives = 141/285 (49%), Gaps = 14/285 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 V + T +NP++V M I+ AK + + S ++ D +QL ++ ++N I Sbjct: 51 IGVSISTTNNPYFVSMNNAIKSMAKEKNTKLTV--SDAQNDSATQLNNVQNFISQNVDAI 108 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+ S +V + A I ++ +D + GG V V +DNVA G A Sbjct: 109 LINPVDSDAIVPAIKAANNAHIPVIAMDRGSN-------GGTVLTTVASDNVAAGKMAAQ 161 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 ++KL + +V + G G ++ R G K + +++SQ A++DR L+ Sbjct: 162 A-VEKLVGKNVKVLELSGTPGASATIDRGKGFNSE-AKTLGLNILSSQSANFDRTTGLNT 219 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N+LQ + +++AI+ ND MA+G A+AV G+ K+ + G DG E ++AG MTA Sbjct: 220 TQNMLQSHKDVQAIFAQNDEMALGAAKAVQATGQ--KIAIFGIDGESETHDAIKAGTMTA 277 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 T+AQ PA IG L+ D + K+ + +P + LVD V Q Sbjct: 278 TIAQQPAKIGEMALQATYDYYQGKKIAHMINSPIY-LVDKDNVDQ 321 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 158/303 (52%), Gaps = 14/303 (4%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 +K S L+ + S SA A A+VL T++NPF+V MK G E +A LG + A Sbjct: 7 HKVSVLLSAALLSVSTSFSASAQDAIAIVLSTMNNPFFVTMKDGAEAKAAELGYKL--IA 64 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 S+ D +L EDL+ + K I P ++ + + A + I ++ LD Sbjct: 65 LDSQNDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDR------ 118 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 A G++ + + +DN+A G FI +LG + +V +EG AG ++ R G + A Sbjct: 119 -TAAHGDIVSHIASDNIAGGELAGEFIAQQLG-KNAKVIQLEGIAGTSAARERGEGFSNA 176 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 A+ +L++SQPAD+DR K L+V N+L N +++A++ ND MA+G +A+ AGK Sbjct: 177 V-TANNFELLSSQPADFDRSKGLNVMENMLAANGDVQAVFAQNDEMALGALRAIEAAGK- 234 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 +LV+G DG E V Q++ATVAQ P +GAT + D G+V+ Sbjct: 235 -DILVIGFDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTA-DRILKGQVVEKSIPVAL 292 Query: 302 KLV 304 K++ Sbjct: 293 KII 295 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 86/307 (28%), Positives = 156/307 (50%), Gaps = 23/307 (7%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE----GDFQSQLQLF 75 +A + A + KT S+PFW M++G++ A+ LG+ + + + GD + Q+ Sbjct: 73 TATQPWQIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKKQISTI 132 Query: 76 EDLS-NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 +L N + G+ AP S+ LV + +A ++GI ++ +D ID D + FVT Sbjct: 133 LELIDNNDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTD-------QILTFVT 185 Query: 135 TDNVAVGAKGASFIIDKL-----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ-- 187 DN G ++I KL + I+EG + RR G E K+A++ Sbjct: 186 FDNFEGGQILGEWVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKNY 245 Query: 188 -IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLV 246 ++++ + ADW+ KA + L++ P I I A+D MA+G ++AV A K+G +++ Sbjct: 246 SLEILDLKSADWETKKAKMITQAWLEKFPTIDVIMAADDQMAVGASEAVQEANKSG-III 304 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK-VIPLDK-APEFKLV 304 G DG P ++ GQ+ AT+ Q P + +LM+++ + + +PL + + + Sbjct: 305 TGFDGTPYGLNAIKTGQIDATINQLPRTQISLITQLMINSLEKEQTTLPLCQLIGQEQTE 364 Query: 305 DSILVTQ 311 +S+L+TQ Sbjct: 365 NSLLITQ 371 >UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein n=1 Tax=uncultured bacterium RepID=C6L1I6_9BACT Length = 324 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 107/308 (34%), Positives = 173/308 (56%), Gaps = 2/308 (0%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 K L+ T A A EY V++KTL+NPFW M +G+E A+ GV+ + A Sbjct: 5 KTTLKLGAAFATLLAVTPAMADGEYGVLMKTLANPFWGAMGQGVEAGAQEAGVAYYMQAV 64 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 S+ + QL + + +N + A ++S NL+ + A GI +V+LD +D L Sbjct: 65 ESDQAAEPQLNVCNTMLERNPVAMITAAINSTNLLPCLKSAQDAGIKVVDLDGNLDQAIL 124 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG-GEVAIIEGKAGNASGEARRNGATEA 181 G + + +DNV GA+GA +++ +LGA+ G V +IEG +GN +G+ R +G + Sbjct: 125 DAEGIEITFRIGSDNVLAGAQGAEYVVSQLGADATGPVLVIEGLSGNITGQKRASGFADK 184 Query: 182 FKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 + A +++VAS P DWDR KA ++ ++L RNP + AI+ AND MA+G ++V AGK Sbjct: 185 LAELAPGLEIVASLPGDWDRGKAANITNDILTRNPGLVAIFAANDGMALGAVESVFAAGK 244 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 G+V++VG DG +A K + G++TA+VAQ P +G ++ + A + G+V P Sbjct: 245 GGEVIIVGVDGNSDAVKSINEGRLTASVAQLPYLVGKQAVENVKIAVEGGEVAKEIIVPT 304 Query: 301 FKLVDSIL 308 L ++ Sbjct: 305 LVLTKDVM 312 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 14/305 (4%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 + G A+++ + F+ M+ G A+ LG +++ P E Sbjct: 28 VFLGGLTTSCGGGGGEGEGYRLALIVGVTGDEFYTTMECGARAAARKLGARLNVQ-GPEE 86 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 +Q + + N I AP +V P+ A + I +V +D I+ + + A Sbjct: 87 FSPAAQTPILNAVVQSNPDAILIAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEIALA 146 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 +++DNV G + +++G +G +V +I K G ++ + R+ G EA K+ Sbjct: 147 R------ISSDNVEGGRMAGEALAEQIGGKG-KVLLISVKPGISTTDQRKQGFEEAIKQY 199 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 I+ + ++ + D +A + T+ LQ +P++ I+ AN G V AGK +V Sbjct: 200 PDIEYLGTEYCNDDPTQAASITTSTLQAHPDLAGIFGANVFSGQGAGTGVRQAGKRDQVS 259 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 VV D P + + G + +AQ+P DIG G+++ V +SG+ PE K + Sbjct: 260 VVAFDASPTQVEDLRRGNLDVLIAQHPNDIGRRGVQIAVRYLESGE------EPENKQIT 313 Query: 306 SILVT 310 + T Sbjct: 314 TGFTT 318 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 13/287 (4%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 T + + V L TL NPF+ + I E K G + + D Q +D Sbjct: 34 PTGSASKGTIGVSLLTLDNPFFKVIGDNIVSEGKKRGYDAVVVSGDK--DVAKQSNQIKD 91 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 K I +P S ++V + A GI + +D + G + + TDN Sbjct: 92 FIVKKVSAIVLSPCDSKSIVPVIQEANAAGIPVFTVDIP-----CHEPGVKIATQIATDN 146 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-----SQIKLVA 192 G + A +I+ LG GG++AI+ K S + R G E S++ +VA Sbjct: 147 YGGGKEAAKAMIEALGEAGGKIAILHFKQ-AESCQLRVKGFREIIDAHNAEGKSKVDIVA 205 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 + + + A + LQ NP++ I+ ND A+G A+ AGKT +V++VG DG Sbjct: 206 ELESGGAKDQGYKAAEDTLQANPDLHGIFAINDPAALGARAALEKAGKTDQVVIVGFDGQ 265 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 PE ++ ++ G++ A Q P +GA + ++ K + P P Sbjct: 266 PEGKQAIKEGKIYADPIQFPDKMGAQIVDAIIQQSKGETLPPQMLIP 312 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 4/275 (1%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 ++ + V TL+N + + + G + EA+ GV +++ A +QL + E Sbjct: 64 AASGNYGDKTIGFVGMTLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQLGIIE 123 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 ++ GI P SS L + + + GI ++NLD K+ ++L G ++ F T+ Sbjct: 124 NMIANKVDGILLVPSSSDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDI-PFYGTN 182 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N ++ +G + AI++G G + R NG E + +VA Q A Sbjct: 183 NYEGAKLAGEYVAKNF-EKGTKTAILKGIEGQTNAADRYNGFIEG--AGDTVTVVAEQTA 239 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W+ + A N++ NP+++ +C ND M +G +A+ A ++ ++G D + EA Sbjct: 240 NWEVDQGYTAAQNIISANPDVELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAVSEAL 299 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK 291 +VE G+ ATVAQ PA++G G+ M+ G+ Sbjct: 300 NLVENGEFLATVAQYPAEMGKLGVDNMLKIFDGGE 334 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 20/304 (6%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 ++ +A + + TL+N F+V +K G+E AK G D+ + + GD Q Q+ Sbjct: 60 VANAAGGKTKIGFSVSTLNNAFFVGLKAGVEKGAKEQGF--DLVQTNANGDAQQQVNDAI 117 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 +L ++ + P+ S ++ V +A I + LD D GG V +FV +D Sbjct: 118 NLLSQGVTALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSD-------GGKVTSFVASD 170 Query: 137 NVAVGAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 NVA+G A +I D+L G+ G V + G G + R G ++ K IK+VA Sbjct: 171 NVALGQTAAKWIADQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAKYPDIKVVA 230 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLV 246 Q +D+ K+L+ TN+LQ+ P I A++ AND +G +A+ NAG+ +LV Sbjct: 231 RQEGAFDQEKSLNAMTNILQKYPQIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILV 290 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 +G DG +A + AG+ AT++QNP + A L+ + D + K +P + A L+D Sbjct: 291 IGADGTAQALSAIRAGKQDATISQNPIQMAAKSLQFVADY-TAKKDVPANYAWPTLLIDK 349 Query: 307 ILVT 310 + Sbjct: 350 SNID 353 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 10/307 (3%) Query: 4 YLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 + K F L+ L+ S A A+ V + + + F ++ G+E+ A+ V + Sbjct: 3 FCKLFIAVLL-LVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQF--ED 59 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 ++GD Q+ + ++ + P+ + A + + LV ++ D L Sbjct: 60 AQGDVVRQINQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLP 119 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 K V ++++ G ++ +K+G +G +A+I G S R G + K Sbjct: 120 KG----VTTVASNDIEAGQLQMRYLAEKMGGKG-TIALIMGDLAQNSTHDRSEGVKQVLK 174 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK-TG 242 I +V Q A+W R K +D+ +N L AI ND MA+G A A+ AGK G Sbjct: 175 DYPGITIVEQQTAEWQRNKGMDLTSNWLLAGRTFDAIVANNDEMAIGAAMALQQAGKAKG 234 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 +V +VG DG+P+ ++ G + A+V Q+P T L+ + K V P F+ Sbjct: 235 EVAIVGIDGLPDGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPVDAEVWVP-FQ 293 Query: 303 LVDSILV 309 L+ V Sbjct: 294 LITPEQV 300 >UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Synergistaceae RepID=C1TNC1_9BACT Length = 338 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 162/288 (56%), Gaps = 3/288 (1%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 V++ TLSNP+WV MK+ + AK +G+SV++ A+P+E D +SQL E + K Y Sbjct: 49 QERIGVLVITLSNPYWVTMKERYGEWAKEMGISVEVMAAPTEKDLKSQLNTLEAMVAKKY 108 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 GI P+ NL+ + +A +KGI +V ++ D LK+AG ++ ++T G Sbjct: 109 DGIIVTPMDPFNLIPGIVKADEKGIPVVCSGPEVSRDGLKQAGAVMDGWITATFKDQGRL 168 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A + +KL G EVAIIEG G +ARR GA+E F+KA +KLVA + +WDR +A Sbjct: 169 CAEDMAEKL-PSGSEVAIIEGIPGAGQSKARREGASEGFEKA-GLKLVAVEAGNWDRNRA 226 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D+ TN+++ +P +K IYCAND MA+ A+ AG G V V GTD IPEA + +++G+ Sbjct: 227 YDITTNLVKAHPQLKGIYCANDVMALAAVDALEVAGIEG-VTVYGTDFIPEAAEAIKSGR 285 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + + + A L + K + +P + LV+ + Q Sbjct: 286 LAGSTTFSQAAWTRGTLVYTLKLIKKDEDLPEKLSVPITLVNGENIGQ 333 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 14/321 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF-------AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL 53 M+K +K+ L +L A A++ ++ F++ M KG E+ AK L Sbjct: 1 MSKRVKWVFTVLTLSLLIAVAMYGLAQQQKKYTIALIPGLTTDGFYITMHKGAEEAAKRL 60 Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 GV + P E +Q+ + + + I AP L+ P+ RA + GI ++ + Sbjct: 61 GVELIFQGGP-EFSPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITV 119 Query: 114 DEKIDMDNLKKAGGNVE----AFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNA 169 D I + + G A+V +DNV G A + +G +G +V + K G + Sbjct: 120 DTFIGENGQYQTGKGNADFPLAYVASDNVEGGRIAARALAKAIGEKG-KVYVSNVKPGIS 178 Query: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 + + R G E KK I ++A+Q D D KA L RNP++ ++ AN A+ Sbjct: 179 TTDQREQGFKEEMKKYPGITVLATQYNDNDANKAASQLAAALARNPDLAGVFGANLFSAI 238 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G A V NAGK G V V D ++ G + V Q+PA++G ++ V A Sbjct: 239 GAANGVKNAGKRGAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAVEWAVKALNG 298 Query: 290 GKVIPLDKAPEFKLVDSILVT 310 K IP + ++D V Sbjct: 299 EK-IPNRYGTGYTVIDRANVD 318 >UniRef50_A1STY3 Transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STY3_PSYIN Length = 334 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 101/279 (36%), Positives = 155/279 (55%), Gaps = 3/279 (1%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 A+V+KTL+NPF+ +M++G K LG+++ + + E Q Q+ + DL Sbjct: 55 TIALVMKTLTNPFFKEMERGARRAEKDLGINLLVKTAAQETSIQQQIGIVADLIELKVDA 114 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + AP SV L+ + A KGI ++N+D +D + KK G F++ DN K Sbjct: 115 LVIAPGDSVELIPILKHAQDKGIIVINIDNLLDQEYSKKVGLLNVPFISVDNELAAYKST 174 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + +KL + EVAIIEG G + E R+NGA AF ++ LVA++ A+W +A + Sbjct: 175 KVLTEKL-TQPTEVAIIEGIRGALNAELRKNGAIRAFSESKFATLVATESANWKIDEAFE 233 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 +A + +NPNI AI+CAND MA+GV + + + GK V VV D IP+A V++G + Sbjct: 234 LAAKLYNKNPNIGAIFCANDMMALGVIEYLQSTGK-DNVQVVAFDAIPQALNAVQSGVLL 292 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 ATV Q+ A+ G G+ L + SGK PL E K++ Sbjct: 293 ATVDQDAAEQGYQGI-LSANNILSGKKTPLKITIEAKII 330 >UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9L7_LARHH Length = 330 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 10/289 (3%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + A +V+K+ +NP++ ++ G G+ + I + + + Q++L +++ K+ Sbjct: 44 SPARIVLVMKSPTNPYFSELANGASRAQLETGIDLSIKVAHEDDALEQQIRLIDEVIAKH 103 Query: 83 -YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 I AP S+ LV +ARA K GI+++N+ +++ + G V ++ DN + Sbjct: 104 QADAIVIAPTDSIRLVPVLARARKAGIHVINIGNRLEPRIVALYGMPVVPLISIDNASAA 163 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 + A + + L G +VAIIEG G + R GA +AF +A +++VA Q A W Sbjct: 164 YQVAGKLAEGL-PRGSKVAIIEGLLGTNNTRQRTEGALQAFSEA-GLRVVAKQSARWKGD 221 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +A V +L+ P+++AI+C+ND MA+G A+ + G TG V + G DGI EAR + Sbjct: 222 EAYQVTAQLLRDYPDLRAIFCSNDMMALGAARYLREKGITG-VRLAGFDGITEARSALHQ 280 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 Q+ AT+ Q+ ++ G ++L VDA E LVD+ L+T Sbjct: 281 RQLVATIDQHASEQGYLAVRLAVDAIAG------RPLAEETLVDTELLT 323 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 13/284 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 + ++ N F V++ +E +AK +G V++ +E Q++ E + I Sbjct: 34 IGATMLSMQNEFIVNVSDAMEAKAKEMG--VELITVDAERSALKQVEQVESFIGQGVDAI 91 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P + A I ++N++ + AFV +D+ Sbjct: 92 IMNPAEVEASSPAIKLAMDAKIPIINVNSE--------TSAKPTAFVGSDDTESARIAMK 143 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +I +KLG +G + ++ G G A+ R NGA + K +KL+A Q +WDR K + + Sbjct: 144 YIAEKLGGKG-NILMMHGFMGQAAQIKRDNGAKDILKANPGLKLLAEQSGEWDRAKGMSL 202 Query: 207 ATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 N +Q + I AI+ ND M MG +A+ AG GKVLVV D IP+A + V+ G + Sbjct: 203 TENWIQSYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTLD 262 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 ATV QN + G ++ V A K + + F+LVD V Sbjct: 263 ATVFQNAKEQGGKAIETAVKAAK-KEAFEKEVLIPFQLVDKGNV 305 >UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7J1_ABIDE Length = 360 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 144/304 (47%), Positives = 189/304 (62%), Gaps = 5/304 (1%) Query: 9 SGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDF 68 S + G + S +YA+VLKT S+ FW DMK GIE+EA LGV VD+ + +E D Sbjct: 53 SASKSGTGSTASVAGEEKYAIVLKTQSSQFWQDMKAGIEEEAAKLGVKVDVQSGNTEDDV 112 Query: 69 QSQLQLFEDLSNKN-YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 + Q+Q+ E+ + YK I AP+S VNL +A KGI +++DEKID L + GG Sbjct: 113 EGQVQVLENFVSTGEYKAIGVAPISDVNLNNAIAEGCSKGIVFIDIDEKIDAKALGELGG 172 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 + A+V TDN VG GA ++ ++G EVAIIEGKAG SGE RR+GA A +A+ Sbjct: 173 GLYAYVATDNKEVGETGAGELLKQVGNN-AEVAIIEGKAGALSGEQRRDGAKAA-FEAAG 230 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 KLV SQPADWDR KA+DVATN++ NPN+KAIYC NDTMAMG +AV +GK + V Sbjct: 231 AKLVDSQPADWDRTKAMDVATNMISANPNLKAIYCCNDTMAMGAVEAVKKSGK--DIKVC 288 Query: 248 GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 GTDG +A K V G++ ATVAQNP +GAT L LMV A K + ++ Sbjct: 289 GTDGNDDAIKAVADGELAATVAQNPKLVGATALNLMVKAVKENAKPEAGAEVTQTGIAAV 348 Query: 308 LVTQ 311 L+T+ Sbjct: 349 LITK 352 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 13/286 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 + ++ N F V++ ++ EA+ G+ ++ +E Q++ E + I Sbjct: 41 VGATMLSMQNEFIVNVHDEMDKEAQKAGI--ELITVDAERSALKQVEQVESFIAQKVDAI 98 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P VA+A I ++N++ + AFV +D+V Sbjct: 99 IMNPCEVEASSPAVAKALAAKIPIINVNSE--------TSSKPSAFVGSDDVESARIAMK 150 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 FI DKLG +G V ++ G G A+ R GA E K+ +KL+A Q +WDR KA+ + Sbjct: 151 FIADKLGGKG-NVVMMHGYMGQAAQIKREQGAREILKQYPNLKLLAHQTGEWDRAKAMSL 209 Query: 207 ATNVLQRN-PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 N +Q I A++ ND M +G +A+ +AG KV+VV D IP+A + V+ G + Sbjct: 210 MENWIQSYGSQINAVFAHNDEMGLGAVKALTDAGLKDKVIVVSIDAIPDALQAVKKGSLD 269 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ATV QN GA G+ + F+LV +++ Sbjct: 270 ATVFQNAEQQGAK-AIATAIKAAKGQPFDKETLVPFQLVTKDNLSK 314 >UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFD0_EUBSP Length = 367 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 164/288 (56%), Gaps = 2/288 (0%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + A + TL+N FWV M++G ED A+ GVS+D+ A+ S+ D QL + ++ K+Y Sbjct: 77 GKKLAAIESTLTNSFWVTMQEGYEDTAEEYGVSIDVQATDSDTDTTGQLDILNNMLVKDY 136 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 + IA +PL+ L+ + A + + ++ +++ D+LK+AGG ++A +T D G Sbjct: 137 EAIAVSPLTEDCLISGIVAANQNDVKIITTGNEVNEDSLKEAGGKIDAKITVDFYNQGVL 196 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 GA +IIDK +G +VA+I G G +ARR+GA E F+ A +++VA + D+D KA Sbjct: 197 GAQYIIDKTDGKG-KVAVIAGNEGATQSDARRDGAKETFEDA-GMEVVAVEQCDFDAQKA 254 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D A +++ NP+I I C ND MA+GV +A+ +V VVG D EA+ +E G Sbjct: 255 YDAAAAIIESNPDIVGIACGNDDMALGVVRALEEKDVKDQVAVVGVDFTEEAKAAIEEGT 314 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ATVA +P +G + +M+ A + V + + +VDS V Q Sbjct: 315 YDATVAMSPYLMGKEAVIIMLKALEGQDVSKVGDSTPMAVVDSTNVDQ 362 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 153/302 (50%), Gaps = 25/302 (8%) Query: 2 NKYLKYFSGTLVGLMLSTSAFA-----------AAEYAVVLKTLSNPFWVDMKKGIEDEA 50 K K FS +V ++ A AVVLKTLS+P+W ++ G + Sbjct: 3 KKKTKLFSTAVVLTCMALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAG 62 Query: 51 KTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYL 110 K LGV V + +E + Q+ + ED N++ + +P +V + A + + Sbjct: 63 KELGVDVTVVGPNAESEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPV 119 Query: 111 VNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNAS 170 + +D + N +F+ T+N G +G ++ L +G +VAII G GN + Sbjct: 120 LLIDTDAKLKNK-------TSFIGTENYEAGYEGGK-LLSSLLQKGDKVAIISGALGNTA 171 Query: 171 GEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMG 230 + R GA A ++A + +VA QPAD D+ KA+ V N+LQ+N ++K ++ AND MA+G Sbjct: 172 TDERVKGAKAALEEA-GMVIVAEQPADSDKTKAMSVMENILQKNNDVKGVFAANDDMALG 230 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 V +AV G V V+GTDG EA + + G++ T+AQNP +G G+K + A Sbjct: 231 VLRAVEAKGL--DVKVIGTDGTLEAVESILDGKLAGTIAQNPYKMGYEGVKNALAAINGE 288 Query: 291 KV 292 KV Sbjct: 289 KV 290 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 16/303 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L + S L+ T A V+ K++ +P+W +++G++ K LGV F Sbjct: 1 MRKLLVFLSVVLI-----TGLSLALTIGVIGKSV-HPYWSQVEQGVKAAGKALGVDTKFF 54 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 E D +QLQ+ E + GIA AP ++ + +A + GI ++ LD Sbjct: 55 VPQKE-DINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDTD---- 109 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 ++ TDN G + + LG +G +V I G + R G + Sbjct: 110 ---SPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKG-KVVIGTGSLTAMNSLQRIQGFKD 165 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A S+I++V + D +A+ +A L +P++ A + A V NAGK Sbjct: 166 AIAD-SEIEIVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAYNGPSQALVVKNAGK 224 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 GKV +V D P+ + V+ G + AT+ Q P +G + ++ K G L P+ Sbjct: 225 VGKVKIVCFDTTPDILQYVKEGVIQATMGQRPYMMGYLSVTVLYLMNKIGVQNTLMMLPK 284 Query: 301 FKL 303 + Sbjct: 285 VTV 287 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 13/305 (4%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 + V + ++A A V + N + + + +++ A+ + V + S Sbjct: 14 RAVLFATVLCLAGSTALADLRLGVSVGQFDN-YIAYLVRAMQERARQVPGGVTLQVEDSG 72 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 D QL E + I P + RA + GI LV L+ + ++ Sbjct: 73 SDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNSRPEVREFPAG 132 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 FV TD +G ++ +K+G +G ++AI+ G+ + R G + + Sbjct: 133 ----VVFVGTDERRLGQMQMEYLAEKMGGKG-DLAILLGRLAHDDTRKRTAGVKDVLARY 187 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 QI++V Q DW R K LD+ N L A+ ND M +G A A+ AG+ +V Sbjct: 188 PQIRVVEEQSGDWQRDKGLDLTNNWLSSGREFDAVVANNDEMGIGAAMALRQAGRR-EVS 246 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 V G DG P+ + GQ+ T+ ++P +G + + + + D + Sbjct: 247 VGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVRK------DVVQGDVWIP 300 Query: 306 SILVT 310 L+T Sbjct: 301 VHLIT 305 >UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Proteobacteria RepID=A8I1T9_AZOC5 Length = 324 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 151/304 (49%), Gaps = 12/304 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE-YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 M+K LK F L +L+TSAFAA E AV K +NP++ ++ G E AK +G V Sbjct: 1 MSK-LKLFGVVLPAALLATSAFAADETIAVFTKNQTNPYFQTVRVGAEAAAKAMGAKVVH 59 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + QL ED+ K I F P+ +V V + I +VN+ Sbjct: 60 YIPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNV------ 113 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + AGG AFV D+ ++G + +++ ++G +G V I+EG G+ + R G Sbjct: 114 -TDRSAGGKFLAFVGADDYSLGLETGRYLLKEMGGKG-NVVILEGVKGSLTNVDRVRGFN 171 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 +A K+ +KL+ASQPA++ R++ L V N++Q +P I + AND MA+G +A+ A Sbjct: 172 DALKEFKDVKLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGAN 231 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 + K VVG +G EA +++G++ A+ N G G + + A + ++ Sbjct: 232 RKAK--VVGINGTKEAVDAIKSGKLLASGDYNGFLQGCIGTMVAIRALRKETIVNEVVLK 289 Query: 300 EFKL 303 + Sbjct: 290 PTVV 293 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 133/310 (42%), Gaps = 15/310 (4%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 K K +++ ML S A + V + + F +++ ++ + K G +V Sbjct: 2 KLKKLIVTSVLMCMLPASVLAKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDG-NVSGQF 60 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 ++GD Q+Q E+ ++ I P+ + + + A I LV ++ + ++ Sbjct: 61 EDAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPEVTL 120 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 A+V +D+ G + + +G V I+ G+ N + R G E Sbjct: 121 PAG-----MAYVGSDSKLAGKLQMEELAKLMNGKG-NVMILMGELSNEATRDRTRGVEEV 174 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 K IK++ Q A W R +A+D+ T+ I AI ND MA+G A+ A K+ Sbjct: 175 AAKYPGIKILDKQTAKWGRKEAVDITTDWALTGQQIDAIASNNDEMAIGAILALKQAKKS 234 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 G VLV G DG P+A + ++ G + +V Q+ G ++ + K KV Sbjct: 235 G-VLVAGVDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVE------SN 287 Query: 302 KLVDSILVTQ 311 L+ L+T+ Sbjct: 288 VLIPYQLITK 297 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 19/300 (6%) Query: 4 YLKYFSGTLVGLMLSTSAFAA-----------AEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 K + + +MLS A A+++K+ + +W+ +K G E AK Sbjct: 2 LKKRLALITMSVMLSAGVLAGCGQKSASDSTKKNIALIVKSTDSEYWLSVKAGAEKAAKE 61 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 G ++ +E D Q ++ + ED N+ GI A + L+ PV A I LV Sbjct: 62 AGANIIFKGPATEQDIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVT 121 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 +D +D D V +F+ TDN ++ A + +L + G+V ++ G ++ Sbjct: 122 VDSGVDSD-------KVASFIATDNEKAASQAAD-VCAELIGKSGKVGVVNFVPGVSTAV 173 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R G + K S I+L+ +Q + D+ KA+ + ++L NP++KAI+ AN+ A+GVA Sbjct: 174 QREKGFRDGMSKHSGIELLKTQYSQSDKSKAMAITEDILTANPDVKAIFAANNRSALGVA 233 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 QA+ G GKV VV D P+ K +E G +TA + QNP +G G+K ++ K V Sbjct: 234 QALKGKGVAGKVKVVAFDADPDEIKGIEDGSITALIVQNPYKMGEEGVKNVLALMKGETV 293 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 16/289 (5%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + V K LS +W+ +K G E AK LG + E D Q+ + D N Sbjct: 27 ASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNVINDFVN 86 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K I A + L+ P+ RA + GI ++ +D I+ D + + T+N Sbjct: 87 KKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFP-------ISHIATNNKEA 139 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 K A + + +G +G EVA I AG A+ AR NG E I LVA Q + D Sbjct: 140 AKKAAEVLANIIGKKG-EVACIPFVAGAATSIARENGFKEGISNYKNIDLVAVQYSQSDY 198 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A+ V N+L +PN+K I+ AN+ A+G A+A+ GKT V++VG D ++ Sbjct: 199 ATAMKVTENILTAHPNLKGIFAANEAGAVGAARALKARGKTADVILVGFDAAQTEIDAMK 258 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G + A + Q P +G G+K V A + +V KL+D+ +V Sbjct: 259 EGIIDALIVQRPYMMGYEGVKNAVAALEGEEV--------EKLIDTGVV 299 >UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacillales RepID=C6D2L3_PAESJ Length = 332 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 144/324 (44%), Gaps = 24/324 (7%) Query: 1 MNKYLKYFSGTLVGLML-----------STSAFAAAEYAVVL----KTLSNPFWVDMKKG 45 M++Y + + + +L + S +++ K+ + FW + G Sbjct: 1 MSEYRRRSASVAIAAILIVVAVVGIYKWAASQRTEKTVDIIVTVKAKSSAIDFWKVLITG 60 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 +ED A G +V + PSE + +Q + + + I A LV + K Sbjct: 61 VEDAANEFGANVTVIGPPSETEIDTQTEQLKQAIRQKPDAIVMAATDYNRLVPVAQQIVK 120 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG-EVAIIEG 164 GI L+ +D +I+ D + +F+ TDN+A G K + L +VAI+ Sbjct: 121 AGIKLITVDSRINSD-------DALSFIATDNIAAGEKAGEEMAKLLPESSSSKVAIMSY 173 Query: 165 KAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAN 224 G +S R G + + S I++ ++ ++ KA ++ +L +P IK I N Sbjct: 174 VYGTSSQLEREKGVRQWLEGHSHIEVASTLYSEGRLEKAYELTKELLSEDPGIKGIVGLN 233 Query: 225 DTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMV 284 + +G +A+ + G +GKV +VG D + K++E G + AT+ Q P ++G +K + Sbjct: 234 EPSTVGAGRAIRDLGLSGKVKLVGFDSSVDEVKLIEGGVLQATIVQKPYNMGYLSVKTAI 293 Query: 285 DAEKSGKVIPLDKAPEFKLVDSIL 308 +A + GK +P E +++ Sbjct: 294 EAVR-GKKVPKLIDTESVIINKDN 316 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 20/295 (6%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 + + V L T +NPF+ + I+ E G V++ + E D Q +D Sbjct: 46 GSVSKGTVGVSLLTTTNPFFNVIADNIKSELVKEGYDVEVVSG--EFDVARQKNQVKDFI 103 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + I P S + + A GI + D G V + + TDN+ Sbjct: 104 VAGHAAIVLCPCDSRGIGPAIQEATAAGIPVFTAD-----IACLAPGAEVVSHIATDNLG 158 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA------SQIKLVAS 193 G + A +I+ +G+ GG+V I++ KA S R G E K S I +V+ Sbjct: 159 GGKQAAEAMIEAVGSAGGKVVILDFKA-AESCILRVQGFKEVIDKHNSENPSSAITIVSE 217 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 P D + K+ A + LQ +P++ I+ ND A+G A+ A K +V +VG DG P Sbjct: 218 LPGDGQKDKSYKAAEDALQAHPDLAGIFAINDPSALGARAALEKANKADQVKIVGFDGQP 277 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 + + ++ G++ A Q+P IG +V + +V P+ +L+ + L Sbjct: 278 DGMQAIDEGKIFADPIQHPDQIGKRVAASIVSYFRGEEV------PKEQLIPTGL 326 >UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STD2_9RHIZ Length = 329 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 170/303 (56%), Gaps = 8/303 (2%) Query: 8 FSGTLVGLMLSTSAFA--AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 S L+ + SA A AA+ A ++K L NPF+ M+KGIE++AK GV+V + A+ + Sbjct: 9 LSAGLLATIAPVSAHAEDAAKVAAIVKGLDNPFFQTMQKGIEEQAKASGVNVSVQAAANM 68 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 GD Q ++ +++ P+S NLV + +K +VN+D ID + K A Sbjct: 69 GDATGQADRLTAMAMQDFDCYLVNPISVSNLVQALVPVAQKKKPIVNIDSTIDAEQAKAA 128 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 G V ++ TDNVA GA ++ KL +G +VA+I G G+ AR G +A + Sbjct: 129 GFAVSTYIGTDNVAAGALAGEEML-KLVPKGSKVALIAGIVGDVGSNARIKGFKQAVE-- 185 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 ++++V ADWDR KAL AT++L +P++ + AND MA+GV +AV +GK V Sbjct: 186 GKLEVVVMVSADWDREKALTAATDILAAHPDLAGFFAANDIMALGVERAVQTSGK--DVK 243 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 V+G DGI +A K + AG+++ATVAQ P +GA GL+ A K GK +P + L++ Sbjct: 244 VIGLDGIVDALKSIAAGELSATVAQYPYVVGAMGLEACAVAAK-GKELPANVPAPVLLIN 302 Query: 306 SIL 308 Sbjct: 303 KDN 305 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 10/283 (3%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + +V+ + ++ +W+ +K G ++ +G + D Q Q+ L E+L N Sbjct: 52 TFGLVVMSTNSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDIQGQVSLMENLINSKVDA 111 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I PL S L PV +A GI ++ +D ++ D +F+ TDNVA G Sbjct: 112 ILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTD-------KYTSFIATDNVAGGRMAM 164 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +I+ +G GEV ++ AG S +AR GA E I ++ Q D+ +A+ Sbjct: 165 ERLIESIGG-SGEVVVVNALAGIPSNDARGQGAEEYAATVDGITVLPQQHCL-DQAEAMT 222 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 NV+ NPN+K I+ + A+G AQA+ + GK G++ +V D + K++E G + Sbjct: 223 ATENVIIGNPNLKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKLLEDGTID 282 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 A V Q P ++G G++ V A +V P APE + Sbjct: 283 ALVVQQPYEMGKIGIEYAVKALNGEEV-PKTVAPEVVIATKDN 324 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 13/278 (4%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 G +T + +A L T +NPF+V M++ + +A LG++++ + D +Q Sbjct: 37 GDHTTTGSASAKTITFALSTQANPFFVQMRESAQKKADELGLAINFQ--DAADDSATQSN 94 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + + + P S + V + + I +V +D ++ NV +++ Sbjct: 95 QLANAAASGTGVVIINPTDSDAMAPAVQQLVDEKIPVVAVDRAVN-------NANVASYI 147 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 +DN G + A + D + EG E+ +++GK G+++ R G E K IK+VA Sbjct: 148 ASDNETGGKQAAKVLSDAINGEG-EILVLQGKTGSSASRERGKGFDEGLKDNPNIKVVAK 206 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV-ANAGKTGKVLVVGTDGI 252 Q A+++R K LDV TN+LQ +PN+KAI+ ND MA+G +A+ + AGK V V+G DG Sbjct: 207 QTAEFERAKGLDVTTNLLQAHPNVKAIFAENDEMALGAIEALGSKAGK--DVKVIGFDGA 264 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 +A K ++ G+M A++AQ P + + K Sbjct: 265 EDALKAIKDGRMYASIAQQPVKMAEQAVIEASKLLKGE 302 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 78/314 (24%), Positives = 133/314 (42%), Gaps = 18/314 (5%) Query: 1 MNK--YLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 M K +LK + + STS A+ A++ + NPF+ +G + +AK LG Sbjct: 1 MKKKTFLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGY-- 58 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 D + +GD Q QL E + K + + + + R K GI D +I Sbjct: 59 DTLVASHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREI 118 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 + G + ++N + +G +GGE + G + + + R G Sbjct: 119 NK------TGIAVTQIVSNNFQGAQLAGEKFAELMG-DGGEYVELLGPESDTNAQVRSEG 171 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 + + K+VA Q A+W + +A ++LQ NPNIK + ND+MA+G A+ Sbjct: 172 FHDILDNFPEFKMVARQSANWSQTEAFSRMESILQANPNIKGVITGNDSMALGAEAALQA 231 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAG-QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 AG+ V +VG DG+ R + G + AT+ Q + ++G Sbjct: 232 AGRK-DVFIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQRVAEQADLYIRTGST---- 286 Query: 297 KAPEFKLVDSILVT 310 PE +L+D +L+ Sbjct: 287 GLPEKQLMDCVLID 300 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 123/315 (39%), Gaps = 18/315 (5%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE----------YAVVLKTLSNPFWVDMKKGIEDEAKT 52 K +A A + + + + F + +E+EAK Sbjct: 2 KKTSRILIIFAATCFLLTACAQKKSIVYKSKKYRIGLSIPASDDVFRNKIINAMENEAKN 61 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 L D+ ++GD Q +L + I P+ ++ A GI +++ Sbjct: 62 L-PDTDLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIANDSGIPIIS 120 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 ++ + + + A+V +D++ G A + + +L +G V I++G+ + + Sbjct: 121 VNNFLKNQD------DAAAYVGSDSITSGIMEAEYAVKQLNGKG-NVVILKGEPNHETAI 173 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R G + + +IK++ Q DW R + + N ++ AI ND MA+G Sbjct: 174 KRTEGFKQVLQNYPEIKIIDEQYGDWKRTLGMQITENWIKNGTKFDAILANNDEMAIGAI 233 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 A+ V V G D P+A K+++ G + TV QN A G+ +K K K+ Sbjct: 234 MALKENNLINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYKLVKGEKI 293 Query: 293 IPLDKAPEFKLVDSI 307 P +V + Sbjct: 294 NKKIFVPYELVVPND 308 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 9/288 (3%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 +A L+ LS F ++ +E + K +V + + +E Q + Sbjct: 41 AAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNYD-NVKLIINDAESQSDKQASQLDSFV 99 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + + +P+ + L V GI ++ + G + +V + N Sbjct: 100 AQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADV-------TGDQGQVWVGSSNEN 152 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 G ++ +KLG +G ++A++ G G + + R G K I++V Q +W Sbjct: 153 GGEIEMKYVAEKLGGKG-KIAVLRGPLGAFAEQGRFAGYETVLKDYPDIEIVFDQTGNWQ 211 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R +A+ + N+L + AI C ND MA+G +AV AGK ++ + G D I +A + Sbjct: 212 REEAMALIENLLTAGTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALDSI 271 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 +AG++ AT Q+ G L + V A + V +D E D++ Sbjct: 272 KAGELDATCFQDAIGQGTNALDMAVKAARGETVERMDIPFELVTKDNV 319 >UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-binding protein n=82 Tax=Proteobacteria RepID=A3N967_BURP6 Length = 320 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 7/295 (2%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS--PSEGDFQSQLQLFE 76 + A+V+K+L+N F++ M+ G ++ K D+ + E D SQ+++ E Sbjct: 30 AETAHKPKVALVMKSLANEFFLTMENGAKEYQKHNASQFDLVTNGIKDETDTASQIRIVE 89 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + I AP S LV V +A GI +VN+D ++D D LK G NV FV D Sbjct: 90 QMIVSKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKGLNV-PFVGPD 148 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N ++ +L A G V I+EG + + R G +A K A K+V+ Q Sbjct: 149 NRKGARMVGDYLAKRLKA-GDAVGIVEGVPTTTNAQQRTAGFQDAMKAA-GAKVVSVQSG 206 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W+ K VA +L PN+KA+ C ND MA+G AV AG+ GKV VVG D I + Sbjct: 207 EWEIDKGNAVAAAMLNEYPNLKALLCGNDNMAIGAVSAVRAAGRQGKVYVVGYDNINAIK 266 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 M++ G++ AT Q A G+ + A + LVT+ Sbjct: 267 PMLKDGRVLATADQYAAKQAVFGIDTALKALAEHRK--QADMTGVVATPVDLVTK 319 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 14/294 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE---YAVVLKTLSNPFWVDMKKGIEDEAKTLG-VS 56 M KYL + V L+ S SA+ A + K+ FW M+ G+E + G + Sbjct: 1 MKKYLTFLFACWV-LLSSGSAWPADNKLNIVFIPKSSDQMFWDLMRNGVERAMQEEGQID 59 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + D SQ+++ + + I P LV PV +A + GI +V +D Sbjct: 60 LTWRGPAYNDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDSA 119 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 +D G FVTTDN A G A + + +G G V ++ AG+AS + R Sbjct: 120 LD-------GSGHLQFVTTDNHASGQLAARQLAELMGQRG-RVVLLRTVAGSASTDDRAR 171 Query: 177 GATEAF-KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G + A I +VA KA A+ +L ++ + AI+ N++ G+ +A+ Sbjct: 172 GFIDYLSANAPAISIVADVYGGGSAGKARHSASALLAKSADFDAIFAVNESATDGMLRAL 231 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 AG G+ +G D P + +E ++ + Q+P +G +K +V A ++ Sbjct: 232 REAGLAGRKRFIGFDSTPFLLEGLEKKEIDGLIVQDPDRMGYLAIKAVVAALRN 285 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 139/289 (48%), Gaps = 10/289 (3%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL--GVSVDIFASPSEGDFQSQLQLF 75 + S + A ++K+L + F+++M + E + +SV+I A + + + Q+QL Sbjct: 47 TASTGQKYKIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQLV 106 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E I AP S +V + +A GI +V + K + GG++ ++V Sbjct: 107 EQCITNKMDAIVIAPCDSEGIVPAIKKANDAGILVVTANTKAN-------GGDIVSYVGA 159 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 N VG A+ + +KLG +G +V +IEGKAGN++ E R G EA K+ I+L+ASQP Sbjct: 160 QNFDVGYSLATALFEKLGGQG-KVILIEGKAGNSTSEERAEGFKEALKEYPGIELLASQP 218 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 ADWDR A+ V N LQ I + M +G +A+ +AG+ +++ + D + Sbjct: 219 ADWDRASAMTVMENCLQTYDQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDV 278 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 ++AG + A+ QN + V A KV P + Sbjct: 279 ISALKAGDLYASGNQNEQSQAYIAIMTAVFALDGYKVDSSQIMPITVVT 327 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 21/312 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLK--TLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 + + ++G M+ + A + + T+++P+ V M +G + A VD+ Sbjct: 9 RTTALAATLVLGAMMPGAVLAQDKIKIGFSQGTMNHPWRVAMVEGNKKYAAEHYPDVDLI 68 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + D Q+ E L + K + +PL+ L V A GI +V LD K++ Sbjct: 69 VTDGNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLDRKVNTP 128 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 V V +N+ +G F+ KL +G + ++G AG ++ R G E Sbjct: 129 --------VTVHVGGENLPLGVGAGEFLAKKLNGKG-NIIELQGTAGASATIDRNKGFAE 179 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRN--PNIKAIYCANDTMAMGVAQAVANA 238 A K +K+VASQ D+ R KA+ +++QR I+A+Y ND MA+G Q + A Sbjct: 180 AIAKHPDMKVVASQNCDYTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLEAA 239 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 G+ +V VVG DG A + V+ G++ AT P + G++ K +V Sbjct: 240 GRLNEVAVVGIDGQETAFEAVKQGKLAATFV-YPF-VAPEGIETAYKVAKGEEV------ 291 Query: 299 PEFKLVDSILVT 310 PE + ++ VT Sbjct: 292 PETITLPTVSVT 303 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 83/304 (27%), Positives = 134/304 (44%), Gaps = 20/304 (6%) Query: 1 MNKYLKYFSGT---LVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL---G 54 MN L+ L + LS +A + AV+ K ++ +W + G + L G Sbjct: 1 MNPVLRNLLTCALFLSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKG 60 Query: 55 VSVDIF--ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 + VD+ E D Q+Q+ E+ + G+ APL + +V PV A + I +V Sbjct: 61 IKVDLIWKGPLREDDRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVI 120 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 D + D +FV TDN G A + L +G V ++ G+AS E Sbjct: 121 FDSALKTD-------KYVSFVATDNYKGGQLAAERMGQLLEGKG-NVILLRYAVGSASTE 172 Query: 173 ARRNGATEAFK-KASQIKLV-ASQPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAM 229 R G + K K IK++ + Q A R A + N+L R + I+C + + Sbjct: 173 EREAGFMDTLKSKFPNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTV 232 Query: 230 GVAQAVANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 +A+A+ + GK GKV +VG D ++ ++ G + V QNP +G G+ MV + Sbjct: 233 AMAKALRDIGKAGGKVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQ 292 Query: 289 SGKV 292 KV Sbjct: 293 GEKV 296 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 5/296 (1%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 M+ ++ TL+N + + + ++ LG+ +I A + QL + Sbjct: 72 MVPDGDYSKYTIGFCGMTLNNEYHIIVANAVQQACNALGIKCEIQAGSQHASVEEQLTII 131 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ ++ GI P +S L+ + I ++NLD K+D LK G ++ F T Sbjct: 132 ENYVSQGVDGIILVPAASEGLISALQECESANIPVINLDTKLDDSTLKTLGKDI-PFYGT 190 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 DN G + ++ +G + AI+ G G + + R NG + K + LVA Q Sbjct: 191 DNYVGGQLVGEEVA-QMYPDGCKTAILRGVQGQTNDDDRYNGFLD--KAGDVVDLVAEQH 247 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 A+W+ + N++Q N +++ IYC ND M +G QAV AG T ++ + DG+ E Sbjct: 248 ANWETDQGYTAIQNIIQANKDLQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEG 307 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + V G+ +T AQ P +G G+ M +GK +L+ S Q Sbjct: 308 LQYVVDGKFVSTCAQQPIKMGKLGVANMAKIF-AGKDAESYIDTGCELITSENAKQ 362 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 19/318 (5%) Query: 1 MNKYLKYFSGTLVGLM---------------LSTSAFAAAEYAVVLKTLSNPFWVDMKKG 45 M K + F+ L+ + + + A + V++ ++V +++G Sbjct: 1 MKKIIFLFTILLLIMSCGNKQETKAEGAAGNTAETKEAKKKIGVLIPGPVG-YFVAVREG 59 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 I+ A V+I S + D QL EDL +K IA A + S V A + Sbjct: 60 IDKAAAENN--VEITYSDAGWDASKQLSQVEDLISKKVDLIAIAAVDSNAAKTAVRMANE 117 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 I ++ I + G + +V + V G LG +GG+V +IEG+ Sbjct: 118 ANIPILAFTNAIGDKENGEYEGLIT-YVGQNEVETGKLTGELAKSLLGEKGGKVVLIEGR 176 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 G + RR G EA ++V +Q ++W++ +AL + +++Q+N I I +D Sbjct: 177 PGTSPQINRRKGVMEALDTNKNFEVVYTQTSNWEKEQALKIVEDLIQKNQTIDVIIAQDD 236 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 A+G A+ A K+LV+G G E V++G + T + + G T + V Sbjct: 237 NSAIGAGMALKEANLKDKILVIGLGGSTEGLNAVKSGLIDGTTYMSAVEEGYTAITAAVK 296 Query: 286 AEKSGKVIPLDKAPEFKL 303 KV P+ + + ++ Sbjct: 297 YLNGEKVEPVTQMKQVEV 314 >UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Gammaproteobacteria RepID=C6V848_ECOBD Length = 357 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 10/310 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M ++ +L+ + S++ VV K + FW +K G E AK LG Sbjct: 42 MKTRHFIYALSLLACVSSSALAKDLNLPVVSKGFQHEFWQTVKMGTEAAAKELGDKTSYV 101 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 E Q+QL E+ + G+ A L + L V A +GI +V D I+ D Sbjct: 102 GPADETQIAEQIQLVENAMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGINSD 161 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 +FV T+N GA+ A + ++ +G +V II AG +S R G E Sbjct: 162 IP-------VSFVATNNRKAGAQAADALASQVNNKG-KVGIIAHVAGTSSAIERSEGFME 213 Query: 181 AFK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 K K IK++ Q +D D KA+D +++Q NP++ IY N+ +GVA A+ + Sbjct: 214 RMKEKYPDIKVLPVQYSDGDPQKAMDKTIDMIQANPDLAGIYGTNEGSTLGVANAIDSQN 273 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 GKV V+G D ++ G + V Q+ IG G+K + +A SG+ + + Sbjct: 274 LKGKVKVIGFDSTEAIINFLKNGVIQGFVVQDAYQIGYQGIKTL-NAALSGQAVEKEIDI 332 Query: 300 EFKLVDSILV 309 K V++ + Sbjct: 333 PVKFVNAENI 342 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 20/297 (6%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 S+ + A + +L PFW MK GIED+AK V + S+ + +QL + Sbjct: 46 ASSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKDNANTQLANVQ 105 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 D GI +P S + + ++ A + GI +V D D G +F++TD Sbjct: 106 DAITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTD-------SGEYVSFISTD 158 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQP 195 N K ++ DKL +G E+A I +G R+ G E K+ ++K V Q Sbjct: 159 NSGGAKKLGEYVADKLN-KGDEIAQIALNQARKNGVLRKEGFEEGIKE--KLKEVDFRQM 215 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 +R + + +++ PN+K I+C ++ +MG A+ K +VG D PE Sbjct: 216 EKVNRDEGVRYTQDLITSYPNLKCIFCHSEDPSMGAVTALKEIN-NDKCKIVGFDCSPEV 274 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL-VDSILVTQ 311 + +++G + AT AQ P +G T + + G PE ++ VD++LVTQ Sbjct: 275 VEAIKSGDILATAAQQPVFMGRTAVDCLKTHLDGG-------TPEKEISVDTLLVTQ 324 >UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YA80_DICT6 Length = 338 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 11/308 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L L L+ S AV+ K++ +P+W +++ G++ AK LGV F Sbjct: 1 MRKILVAILIILFPLIFSIGYSKEIHVAVIGKSV-HPYWAEVELGVKQAAKDLGVKATFF 59 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 E D +Q+ E GIA AP + + +A KGI ++ LD Sbjct: 60 VPQKE-DIPAQISQMESFIAMGVDGIAIAPSDPTAIAPTIEKAMAKGIPVITLDTDAPQ- 117 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 ++ TDN + G + D LG +GG+VAI G + R G + Sbjct: 118 ------SKRLVYIGTDNYSAGKIAGMVMNDLLGIKGGKVAIGTGSLTAMNSLERIRGFMD 171 Query: 181 AFKKASQIKLVASQP-ADW-DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 +I +V D+ D +A+ +A L P+++ + A+AV A Sbjct: 172 GIASNKRIVVVTKPALCDFEDTGRAVTLAEQALLTYPDLRGFFGVYAFNGPAAAKAVKAA 231 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 GK G+VL+V D E ++++ G ++ATV Q P +G ++++ + G L + Sbjct: 232 GKVGQVLIVCFDTTAEHMQLIKEGVISATVGQRPYMMGYKSVEVLTKMAQKGVDATLKEL 291 Query: 299 PEFKLVDS 306 P +++D+ Sbjct: 292 PANRIIDT 299 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 18/292 (6%) Query: 26 EYAVVLKTLSNPFWVDMKKGIE---DEAKTLGVSV--DIFASPSEGDFQSQLQLFEDLSN 80 + V K N +W +K+G E + K G ++ D+ ++ EGD Q QL + ED+ N Sbjct: 72 KLGSVAKAFENEYWRTLKEGEELGTQKFKENGYNITLDMKSAQGEGDEQGQLSIVEDMIN 131 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K Y + +P+S NLV V +A K I ++N+++ I N + FV + Sbjct: 132 KKYTALLLSPISDGNLVPGVEKAKKNNIPVINVNDGIIK--------NADIFVGPKAIMN 183 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWD 199 G A +I K+G EG EVAI+ G + R G K A+ +K+V Q ADWD Sbjct: 184 GELAAEWISKKIGGEG-EVAIVIGMPKAFAARQRTLGFENWMKSNAAGVKIVEKQNADWD 242 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R KA D+A +++ PN+KAI+C ND MA+GV +AV + + +LVVG DGI EA + + Sbjct: 243 RAKAKDLAEIWIKKYPNLKAIFCNNDVMALGVQEAVNASKR--DILVVGVDGIKEAYESI 300 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 G+M ATV P G +++ + + G+ +P L+DS V + Sbjct: 301 RKGEMDATVDSFPLYKGQIAVEMALRSL-GGQQLPRVIWTPQALIDSTNVNE 351 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 15/313 (4%) Query: 1 MNKYLKYFSGTLVGL-MLSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 M + VG+ +L++ A A + ++++ SNP+W K E+ A+ LG Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEA 62 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 D+ S +GD ++ + + + I P ++ + V +A + GI + ++ +I Sbjct: 63 DV--SSHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEI 120 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 + G EA + ++N A GA I +G + ++G + + R NG Sbjct: 121 NQQ------GLAEAQLVSNNAQGAALGAQQWIKSVG-DSARYVELKGAPSDNNAATRSNG 173 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 + ++ V S A+WDR + + ++LQ NP+I + ND MA+G A+ Sbjct: 174 YETVLSQYPGLEKVGSDVANWDRTQGFNKTQSMLQANPDIDGVISGNDEMALGAISALKE 233 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 AGK V+V G DG P+A + V+AG+M TV Q A +++ +G+ Sbjct: 234 AGKLDDVVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMADKYVTTGET---GV 290 Query: 298 APEFKLVDSILVT 310 E +L D L+T Sbjct: 291 DGEKQLFDCFLIT 303 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 6/292 (2%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDE-AKTLGVSVDI 59 M + L + + + + A AV++KT ++ +W +++KG D AK ++ Sbjct: 23 MRRLLCAATMLCAAVAVGQAHAADRGIAVIVKTANSNYWQNVRKGAADAVAKVENYTMTF 82 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 SE Q+ + D + I AP LV + +AW+ I +V +D I Sbjct: 83 QGPTSESAVADQVNMVADAVTQKVAAIVLAPSDPDALVPSIRKAWEAHIPVVLIDSMISD 142 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 K ++F+ TDN A G ++D +G G +VAI+ G S R G Sbjct: 143 SGAKY----YQSFLATDNEAAGEALGKEMVDHVGQTG-KVAIMSYVPGVGSEIGRVGGFR 197 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 + + S I++V + A++ T+VL NP++K I+ AN+ A+GV +A+ AG Sbjct: 198 KYIAEHSHIQIVGPFYSQSQMALAMNQTTDVLASNPDLKGIFAANEMTAVGVGRAIQQAG 257 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK 291 K+GK+ + DG + + V +G Q +GA G++ + K Sbjct: 258 KSGKLYAIAFDGNEDEQGFVRSGTFQLLAVQGSYAMGAKGVETAIGVLTGAK 309 >UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3L7_9CLOT Length = 378 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 82/286 (28%), Positives = 138/286 (48%), Gaps = 3/286 (1%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + V++ + SN FW MK E+ A+ LG+ + +F + +E D Q QL + + Sbjct: 89 GEKIGVLISSTSNEFWGTMKTRYEEAAEDLGIEIRVFEADAEDDTQGQLDALNTMVTMGF 148 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I +P+ NL+ + A + I ++NL +D + L AGG+++ +T + G+ Sbjct: 149 DAIILSPIDGTNLIPGIVAANEAEIPVINLGPGVDAEALADAGGHLDGKITVNFEEQGST 208 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A+ +I ++ +GG+VAI+ G G R NGA F+ ++LVA+Q DWD KA Sbjct: 209 VANDMISRM-EDGGKVAILAGLEGAGQSVGRTNGAKTVFENTEGVELVAAQACDWDTEKA 267 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 + ++L +P++K I+ ND MA+ QA+ G V+V G D +A+ +E G Sbjct: 268 YEATKDILTAHPDLKGIFACNDNMALAAVQALQEMG-NKDVMVYGVDYTTDAKAAIEDGT 326 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 M ++ + A I + M GK LV V Sbjct: 327 MMGSMTYSSA-IYTKAAEEMAMLIVQGKTFKDPVYLPLTLVTQDNV 371 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 10/286 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 T+ + + L F+ +K+ + EAK G+ V + S + GD +Q+ +D Sbjct: 35 TADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIV--SDARGDAATQVNQIQDF 92 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 ++ I + P + +PV A + I +V +D + K +F+ +D+V Sbjct: 93 ISRQVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPGK-------SFIASDSV 145 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 A ++++ + G +G ++AI++G+ G R+ G +A K A IK+V+ QPADW Sbjct: 146 AAARTLGNYVVKESGGKG-QLAILQGQIGTTPQVDRQKGFGQALKNAPGIKVVSQQPADW 204 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 + KA V+ ++LQ +P I ++ D MA+G AQAV +G K L+VG DG K Sbjct: 205 AQDKAYSVSQDMLQAHPGIDILWGQADAMALGAAQAVKASGSKKKHLIVGFDGDIAGLKA 264 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 V G + AT+ Q +G + VD K KV P F L Sbjct: 265 VRRGTVDATMVQQTRKMGRMSVNTAVDIIKGKKVPAQQLQPAFLLT 310 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 76/311 (24%), Positives = 130/311 (41%), Gaps = 18/311 (5%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWV-DMKKGIEDEAKTL-GVSVDIF 60 KY+K+ + L L+ A + + + S+ W M I EA GVSV+I Sbjct: 6 KYMKWITVLFCLLGLAACRQDAPRFRIGVAQCSDDSWRHKMNDEILREAMFYDGVSVEIR 65 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ++ D + Q + +K + + + + V A++KGI ++ +D KI D Sbjct: 66 SAAD--DNRKQAEDVHYFIDKGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILSD 123 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 A++ DN +G ++I L +G V + G G+ R G Sbjct: 124 -------KYTAYIGADNYEIGRAVGNYIASSLKGKG-NVVELTGLGGSTPAMERHQGFMA 175 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A IKL+ A W+R A ++L+R+P I A+Y ND +A G QA AG+ Sbjct: 176 AISNYPDIKLIDKADAAWEREPAEVEMDSMLRRHPKIDAVYAHNDRIAPGAYQAAKKAGR 235 Query: 241 TGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 +++ VG D +P ++V + AT G ++L ++ + K P + Sbjct: 236 EKEMIFVGIDALPGKGNGLELVLDNVLDATFIYPTN--GDKVMQLAMNILE-KKSYPRET 292 Query: 298 APEFKLVDSIL 308 +VD Sbjct: 293 VMNTAVVDRTN 303 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 14/293 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 + AF+A A++ NPF+ G E +AK LG + D Q ++ + Sbjct: 20 TALPAFSADLIAIITPAHDNPFFKAEAVGAEAKAKELGYETLLMTHDD--DANKQSEMID 77 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + K I + V V +A GI +D +I+ A G A + ++ Sbjct: 78 TAIGRGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREIN------ATGVAVAQIVSN 131 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N GA + +G +G V ++ GK + + R G + +K VA Q A Sbjct: 132 NYQGAQLGAQEFVKLMGEKGNYVELV-GKESDTNAGIRSQGYHDVIDDYPDLKSVAKQSA 190 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W + +A +LQ NP+IK + NDTMAMG A+ AG+ V+VVG DG + R Sbjct: 191 NWSQTEAYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRK-DVIVVGFDGSNDVR 249 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 +++G + ATV Q ++ K+ +K +L+D +L+ Sbjct: 250 DSIKSGGIKATVLQPAYAQAQLAVEQADAYIKNKTTPKEEK----QLMDCVLI 298 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 14/275 (5%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 + S F+VD++KG+++ A GV + GD +Q + ED + GI Sbjct: 62 VGFSNWSRSFEFYVDLEKGMQEVADAQGVKL--ITQDPNGDLAAQTKQVEDFITQGVDGI 119 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+ S V + GI LV D + AGG+V + + +DN G A Sbjct: 120 VLCPIDSNAAVTEAETINQAGIPLVTTDIAV-------AGGDVASHIASDNTLGGQLAAQ 172 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALD 205 FI ++LG G +VA+I S R G T+ K I++VA Q + R K L Sbjct: 173 FIGEQLGGTG-KVALIN-NPTITSLIERETGFTDTMAQKYPDIEIVAVQSGESKREKGLS 230 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ-M 264 V N+LQ NP+++ ++ ND M +G QAV A + +++VG D EA K ++ G + Sbjct: 231 VMENILQSNPDVQGVFAVNDMMGLGALQAVQAAQR-DDIVIVGFDATEEAVKYIKEGSAL 289 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 A+VAQNP ++G T ++ M+ +V P Sbjct: 290 KASVAQNPVELGKTTMETMLKVIAGEQVEKNIPVP 324 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 13/268 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 L T +PF+V +K+ +E A GV + + S + D Q+ ED + Sbjct: 30 TIGASLLTQQHPFYVQLKQAMEKAADDNGVELIV--SIANQDLNKQISDVEDFIVRGVDA 87 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I +P+ S +V + +A + GI ++ +D + G V+A V TDN G Sbjct: 88 IVLSPVDSKGVVGAIIKAKRAGIPVITVDISAE-------GVEVDAHVATDNYYGGRIAG 140 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + L +G +VAII+ S R G EA K I++VA QP R +AL+ Sbjct: 141 ETMAKVLNGKG-QVAIIDYPV-VQSVRDRVAGFKEAVSKYPGIEIVAIQPG-ITRPEALN 197 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ-M 264 A N+LQ +P + I+ D A+ AV +AG V V+G DG+ EAR V+ + Sbjct: 198 TAQNILQAHPEVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEARNAVKKEESF 257 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKV 292 A V Q P ++G GL+ + K KV Sbjct: 258 VAVVCQYPGEMGRLGLETALRVIKGEKV 285 >UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF94_9GAMM Length = 319 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 9/292 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 + + +V+K+L NPF++ M++G A LGV + + + +E + Q+ L ++ Sbjct: 30 ATPVDKPKVLLVMKSLVNPFYIQMEQGARQAANELGVELIVRSGTNETLVEQQISLIDEQ 89 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + AP S+ ++ + RA + G+ +VN+D +ID + +++AG FV+ DN Sbjct: 90 LAAGIDALVIAPADSIAILPVLIRANELGVKIVNIDNRIDTNAIQRAGLPAIPFVSVDNE 149 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G + + + G + + IIEG + RR+GA A ++ I++VAS+ A W Sbjct: 150 FGGYEAGKILAELAGPD-AKALIIEGPRSAINARERRDGARRALQEN-NIEVVASEVASW 207 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 A + NV RNP + I+ AND MA+G G L+ G D IP+AR Sbjct: 208 KLESAYALTQNVHARNPELNVIFAANDMMALGALLYAQEHGLNDW-LIAGFDNIPDARAA 266 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 V G++ T+ Q G G+ VD V + LV + ++T Sbjct: 267 VREGRLAVTIDQQADRQGYQGVATAVDLLNDKAVD------DVVLVKTRVIT 312 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 17/304 (5%) Query: 8 FSGTLVGLMLSTSAFAA--AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 T +G ++TS A + + K +NP+ V G+E K +G + A + Sbjct: 61 LPVTGIGAQIATSVKAGGDYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTAITQAPTTA 120 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 + Q+QL E++ ++ I S ++ V +A G+ ++ + D + Sbjct: 121 DSVEEQVQLMENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGTPAAEDTFLRT 180 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 D G A + DKLG +G + I+EG AG ++ R NG + Sbjct: 181 --------GVDYYESGYTMAKAVADKLGGKGKFI-ILEGPAGASNAIERLNGINTGLSEY 231 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 I++VASQ A++ R + + V N++Q+ +I A+ ND A+G QA+ A + VL Sbjct: 232 EGIEIVASQTANFKRTEGMSVTENLIQQYTDIDAVIACNDESALGAVQALTAANMS-DVL 290 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS-----GKVIPLDKAPE 300 V G DG +A V+ G M AT +P G V GK IP A Sbjct: 291 VCGFDGSVDATNAVKEGTMFATYNTDPYGSGFVACAYAVKYLNDKTEPEGKFIPFPTAAN 350 Query: 301 FKLV 304 LV Sbjct: 351 DPLV 354 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 13/293 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 S A + L +L N F V + + +A LGV + I+ D +Q+ E Sbjct: 46 TSKPADKKIVVGMTLYSLKNEFTVRLSNAAKKKAAELGVELKIY--DGNYDPNTQINQVE 103 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + + I P + + V +A I ++ ++ ++D + + ++V + Sbjct: 104 TMISDGVDAIILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSE-------KLTSYVGSK 156 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 +V G I DK+G +G + I++G G ++ R G KK IK++A + A Sbjct: 157 DVYAGELEMQAIADKIGGKG-NIVILDGPLGQSAQLERSEGIQNVLKKYPDIKVLAEKTA 215 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W R +A+ V N LQ I A+ ND MA+G +A+ K + +G DGI +A Sbjct: 216 NWSRSEAMTVMENWLQAFDKIDAVVAENDEMALGARKAIEA--KKLDIPTIGVDGITDAL 273 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 VE G + AT+ Q+ A G+ L++ V K G+ + + +F+ V V Sbjct: 274 DAVEKGTLIATIFQDGAGQGSKALEIAVAKAK-GENVDKEYWIDFEPVTKDNV 325 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 12/277 (4%) Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 F M +G+E +A+ LG + + ++ D Q+Q+ E+L + I A + S + Sbjct: 56 EFVTLMTEGMEKKAEELGCDLVML--DAQQDAQNQITQIENLIAQKVDVIIVAAVDSDAI 113 Query: 97 VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG 156 + + GI LV ++ + + +V D+V G ID++G EG Sbjct: 114 LPAIEMCDDAGIPLVGVNMLFNTEEPYH-------YVGPDDVLAGELEMQNAIDEIGGEG 166 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDRIKALDVATNVLQRNP 215 V I+EG G ++ R G K +I ++A Q A+W R +AL + N L+ Sbjct: 167 -NVVILEGPIGQSAQIQRLEGNQNILDKYEGKINVLADQTANWSREEALTLVENWLETFS 225 Query: 216 -NIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 I AI ND MA+G QA+ AG T K++V G D I + V+ G + TV Q+ Sbjct: 226 GKIDAIVAHNDEMALGAIQALEAAGLTDKIVVTGVDAILDGCNAVKDGTLLGTVYQDAGL 285 Query: 275 IGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 G+ ++ D + + K + V + Sbjct: 286 EGSEAVQKAYDVLEGKVTEKELSYIDMKWITKDNVDE 322 >UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZM3_ACICJ Length = 339 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 12/295 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSN--PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 L A A Y L T SN P+W+ +++G + AK GVSV A S D Q+ + Sbjct: 34 LPVPAKPAKHYHFTLITKSNASPYWLAVREGADAAAKKFGVSVAFEAPASGTDLAGQIGM 93 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + GI A + L+ PV A I +V +D + + + F+ Sbjct: 94 VNNAVTGGTDGIILAAQNPQALLKPVKSALAHHIPVVTVDSGLSPNIS-------DCFLA 146 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-S 193 T NV A A + D L G+ AI++ ++G AR G K IK + Sbjct: 147 TSNVGAAAALAKYTADHLMGGKGQYAIVDFNHTASTGIARPKGFMLGMKSYPHIKKMGPI 206 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 Q ++ D L +AT +L + P++K I+ AND A+G A+AV A KV VVG D Sbjct: 207 QYSNNDVSAGLRIATTMLTQYPHLKVIFGANDRAALGPAEAVQRA--HAKVKVVGFDADL 264 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 +V+AG + A++ Q+P D+G + ++D + P F L L Sbjct: 265 GEIALVKAGIIQASILQSPYDMGYYAVVALLDKLDGKTLPKRINTPYFLLTPKNL 319 >UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9KAG4_BACHD Length = 323 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 11/294 (3%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 ST V + L F M+ +++EA + S ++ D Q+ E+ Sbjct: 36 STGDSGQKVIGVSISNLD-EFLTYMQDAMKEEAANY-PDFEFIFSDAQNDSTQQMAQVEN 93 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 ++N I P+ + + V V GI ++ + D + AFV +++ Sbjct: 94 FISRNVDAIIVNPVDTTSAVDIVNMVNDAGIPIIIANRTFDGVDQ------ATAFVGSES 147 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 + G + L EG +AI++G+ G+ + R G + ++ +++V A Sbjct: 148 IQSGLLQMEEVAKLLNNEG-NIAIMDGELGHEAQIMRTEGNKQIIEEHDGLEVVLQGTAK 206 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 +DR + + + N L I A+ ND MA+G A+ GK V+V G D P A + Sbjct: 207 FDRSEGMRLMENWLNSGTEIDAVVANNDEMALGAILALEAVGKLDDVIVAGIDATPAALE 266 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ G++ TV Q+ GAT +K+ V A V D ++LV V + Sbjct: 267 AMKEGKLDVTVFQDAKGQGATSVKVAVQAANGEDV--EDAMIPYELVTPENVEE 318 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 10/307 (3%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 KYLK LV + +++ A V + F ++ I+ EAK G+SV Sbjct: 2 KYLKRI--VLVAALGCSTSVLAETIGVSMAYFDQNFLTIIRHSIDKEAKARGISVQF--E 57 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 + GD Q ++ + I P++S K GI LV ++ L Sbjct: 58 DARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIPLVYVNRTPGDSKL 117 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 FV +D G + +L G VA++ G +A R + Sbjct: 118 PAG----VVFVGSDEKQSGTLQMEELA-RLANYQGNVAVMIGNLTDAGALQRTKDVEQVV 172 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 K ++K+V Q A++ R + +D+ N + +I + ND MA+G A+ AGK G Sbjct: 173 AKYPKMKVVQKQSANYSRSEGMDLMLNWITNGESIDIVAANNDEMAIGAIMALQQAGKQG 232 Query: 243 -KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 KVLV G D P+ K + +G+M TV Q+ G + + K K+ P P Sbjct: 233 SKVLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIKGEKLDPYYWIPFE 292 Query: 302 KLVDSIL 308 + + + Sbjct: 293 LVTPANM 299 >UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic component n=12 Tax=Proteobacteria RepID=Q2SMT1_HAHCH Length = 309 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 11/311 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S + + A A + V + + F ++ GIE AK SVD+ Sbjct: 1 MKKL--ALSVLASAMFAGSVAAADLKIGVSMAVFDDNFLTALRNGIETAAKDK--SVDVQ 56 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + +QL ++ I P+ + V + A GI L+ ++ + Sbjct: 57 IEDGKNEVGTQLNQIQNFIASGVDAIIVNPVDTDATVSISSDAEAAGIPLIYVNRQPINV 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 N +AFV ++ G + LG +G V ++ G+ N + R + Sbjct: 117 NQLPDN---QAFVASNEEVSGTLQTEEVCRLLGGKG-NVVVMMGELSNQAAIQRTKDIHD 172 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 K + S +K+VA Q A+W R+K D+ TN L A+ ND MA+G QA+ + Sbjct: 173 VIKRKECSGMKVVAEQTAEWSRLKGNDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKAS 232 Query: 239 GKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G+ V+V G D P+A +++G + TV Q+ GA + V K V Sbjct: 233 GRKMDSVVVAGIDATPDALAAMKSGDLDVTVFQSAKGQGAGAVDAAVRLAKGENVDQKVW 292 Query: 298 APEFKLVDSIL 308 P + + L Sbjct: 293 VPFELVTPANL 303 >UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Tax=Bacteria RepID=A9GMT2_SORC5 Length = 340 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 13/272 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 AVV K ++ FW + G ++ L V V E D ++Q+ + + G Sbjct: 42 RIAVVPKGTTHEFWKSVHAGAVKASRELDVDVVWKGPLREDDLKAQVDVVSSFVAQGVSG 101 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I APL + L PV A + I +V D + D+ +FV TDN A G Sbjct: 102 IVLAPLDATALRAPVRAARQAKIPVVVFDSDLASDDH-------VSFVATDNEAAGRLAG 154 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS-QPADWDRIKAL 204 + +G +G +V ++ + G+AS + R G +A + + + + Q A Sbjct: 155 EHLGKAIGEDG-KVVVLRYQEGSASTQHREKGFLDAVRAMPGVTVASENQYGGATTESAF 213 Query: 205 DVATNVL----QRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 + ++L I ++ N++ G+ QA+ KV VG D + + Sbjct: 214 HKSESLLLAQRAAEGAIAGVFTPNESTTFGMLQALRKTNVARKVKFVGFDASEKLLGALR 273 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 G + A V QNP ++G +K MV KV Sbjct: 274 EGDIEALVVQNPFNMGYVAVKTMVAHLHGEKV 305 >UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGX3_SEBTE Length = 319 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 11/287 (3%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + V + + F M G++ A+ G +++ ++ D Q+ E+ + Sbjct: 40 KVGVSIANFDDTFLTYMMDGMKKAAEKEG-DIELEFVDAKEDIAKQMNQVENFVTQGKDV 98 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I P+ + A G +V ++ +V ++ G Sbjct: 99 IIVVPVDTSAADPMTNAAVTNGTKIVYVNRNPGNLPDGAY------YVGSEEKKAGIMQM 152 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++ +K+G +G + I+ GK N R G E KK IK++ Q W R + Sbjct: 153 EYLAEKMGGKG-NIVILMGKLDNEGTIKRTEGVEEIAKKYPDIKILDKQTGLWQRTDGMA 211 Query: 206 VATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 N L + N I AI ND MA+G QA+ ++GKTG + V+G D P+ + AG + Sbjct: 212 KTENWLNKYGNEINAIVSNNDDMALGAVQALKDSGKTG-IFVIGVDATPDGLAALAAGDI 270 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +ATV Q+ G +++ A V+ P FKLV + + Sbjct: 271 SATVFQDADGQGGGAVEVAKKAANGETVVKETWVP-FKLVTPENINE 316 >UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUK5_9CLOT Length = 336 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 15/296 (5%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPSEGDFQSQLQLF 75 + + + ++K++ F + M G E A + +++ + + Q+QL Sbjct: 48 AADPSVKTYNFVFIVKSMQFSFMLSMIDGAEAAAALVPNINIKCIGPETPYSVEEQIQLV 107 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E I P S +V + +A GI + N K GG+V ++ Sbjct: 108 EQAITDGADAILITPADSTGIVPAIEKANAAGIPIAT-------PNTKAYGGDVLTWIGV 160 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 DN VG + + + + L G +V +IEG AGN++ R +G +AFK I+L+ SQP Sbjct: 161 DNYTVGYELGTALCEALEGTG-KVVLIEGTAGNSTSTERVDGYLDAFKNYPGIELLDSQP 219 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 AD++R K + V N LQR P I + N M MG +A G+ +++ V D + Sbjct: 220 ADFNREKGMTVMENFLQRYPEIDGVGSINKDMTMGAIEACKAVGRDKEMVQVTFDVDNDC 279 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++AG + T AQ A + + A KV P P LVT+ Sbjct: 280 LDAIDAGDILITGAQEEKSQIANAIYACLLACNGYKVAPEQYIPM------TLVTK 329 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 15/291 (5%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 T V L T + F+ ++K I+++A+ G + D QL +D Sbjct: 48 TEKSGEKVIGVSLLTREHVFYNLIEKAIQEKAQ--GYKFKPIIMDASQDSNKQLAQVQDF 105 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + I AP +S + V A K GI + +D KA G+V++ V TDN Sbjct: 106 ITQKVDAIVLAPTASAGIAPAVDLAKKAGIPVFTID--------IKAEGDVKSHVATDNY 157 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 A G A + +K+ G+VAII S R G +A + IK+V + Sbjct: 158 AGGKLAAKYAAEKVLNGKGKVAIITYSE-VQSCVDREKGFKDALAEYPNIKVVDVENCSG 216 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 KA ++ ++L + P++ I+ D A+G + AG+ V V+G DG PEA + Sbjct: 217 SAEKAANLTQDILLKFPDLDLIFAVGDPFAVGAVSTIKAAGR--NVKVIGFDGNPEAIQE 274 Query: 259 VEA-GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 ++ G A V Q+P IG + L+ D +GK +P +VD+ Sbjct: 275 IKNHGLWVADVVQHPDQIGGKVIDLIADYF-NGKSVPPQVLIPPTIVDASN 324 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 23/293 (7%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + AV+L + S F V + +G++D+AK LGV V + ++GD +Q+ +D + Sbjct: 38 KKIAVLLYSQSFEFMVALGQGVKDKAKELGVEVTVL--DAKGDSSTQISQIQDQLAQGVD 95 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI +P +S LV V G + +D I G +A V DN G G Sbjct: 96 GIVLSPNNSAELVPGVQMIHDAGKTVTTVDSVI-------PGDIADAAVAFDNEKAGKLG 148 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A + +G +G V +G G R G + K+ IK++ + A W AL Sbjct: 149 AEALAKLMGEKG-TVLEYQGAKGAYHAILRGKGFNDGIKQFPGIKVIG-RDAQWTADNAL 206 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLVVGTDGIPEARKM 258 + + + +I ++ ND M G+ ++ K + +VG DG P A Sbjct: 207 SLTVDNFTADSSINGLFSHNDEMVRGIVSGLSQINKDAPVGAANHIPLVGVDGTPLALDR 266 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + G AT+ QNP ++GA L+ VD +V P+ +L D+ L+T+ Sbjct: 267 IRNGVQDATMDQNPFEMGALALQAQVDLLDGKQV------PKMQLTDTKLITK 313 >UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSL0_9FIRM Length = 389 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 19/300 (6%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIE---DEAKTLGVS--VDIFASPSEGDFQSQLQ 73 T + +A +K N W ++ G E ++A G VD + E D + QL Sbjct: 86 TKSSDEYSFAGNVKAFENVVWQEIANGYEGFAEDATAAGCKLSVDTTSPMGESDEEGQLS 145 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + +D K + +P+S N + + A + I + ++ + + + FV Sbjct: 146 ILKDQVRKGVNAVLLSPISDANCLPGIEAAHEADIPVYAVNNEFN---------GADMFV 196 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVA 192 +++ G A ++ +KLG G+VAI+ G A A R G E F S I++VA Sbjct: 197 GPNSLEQGQLAAEWVNEKLGG-SGDVAIVMGMAKTAVTRNRTQGFEEWFADNDSDIQVVA 255 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTD 250 Q ADWDR +A DVA L+ P++KAI+C ND MA+GV +AV A T + V+G D Sbjct: 256 KQNADWDRSQAKDVAATFLKTYPDLKAIFCNNDVMALGVIEAVKEADLTLNKDIYVIGCD 315 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 G EA + A +M AT+ P G ++ + G+ +P K++DS V Sbjct: 316 GQSEAYDSIRANEMAATIDTFPYYEGYMAAEVCYRSL-IGQTVPRVVFTPSKMLDSTNVD 374 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 14/286 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 ++ T++NPF+ +++ IE+ G + + ++ D Q Q+ + EDL + Sbjct: 69 KFGFAATTMNNPFFHAIQEAIEEVVDENGDELIVI--DAQNDAQKQISMVEDLLTQGIDL 126 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + P+ S ++ + + K G+ +VN D + +L V + +DN G A Sbjct: 127 LFLCPIDSASIKSSLEQCGKAGVPVVNFDTDVYDVDL------VNTIIVSDNYYAGELVA 180 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++ KL EG +V I+ + R+NG + K K+V+ D +L Sbjct: 181 EDMMKKL-PEGSKVCILT-SPSAEACIKRQNGFKD--KADGYFKIVSEIDGKGDTATSLG 236 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 +A +VLQ NP++ A Y ND A+G QA+ + KT VLV G DG P ++ + G M Sbjct: 237 IAEDVLQGNPDLGAFYAINDPSAIGCVQALESQKKT-DVLVYGVDGQPMGKQAISEGTME 295 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 AT AQ+P +IG + V P F L+D VT+ Sbjct: 296 ATAAQSPINIGKESVAAAYKILSGESVEKNILVPTF-LIDKNNVTE 340 >UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Bacillaceae RepID=A4IT20_GEOTN Length = 337 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 122/288 (42%), Gaps = 9/288 (3%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + +V + L N +W ++KG + A+ L V ++ + P + + L++ + + Sbjct: 46 AKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDVDLE-YIGPRQANIDEHLRILKKAAA 104 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 GI L+ V + K I ++ +D ++ TDN Sbjct: 105 AKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPT-------SWRVGYIGTDNYYA 157 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G +++ VAII G + R G +A K +I++VA + + R Sbjct: 158 GFIAGRALVEDTQG-MVNVAIITGSLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITR 216 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 ++A + +L+++P + A Y + A+G+A+ V + + ++G D +PE + ++ Sbjct: 217 VQAAEKTYTILKKHPEVNAFYGTSALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQ 276 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G + ATV Q P ++G +K+M D V + + L Sbjct: 277 KGTIEATVVQEPYEMGYRAVKMMADIVAGHDVPAITNTETKVIRKEDL 324 >UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Bacteria RepID=C6D2L0_PAESJ Length = 333 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 30/314 (9%) Query: 1 MNKYLKYFSGTLVGL-MLSTSAFAAAE--------------------YAVVLKTLSNPFW 39 M K+ L+ + MLS ++ ++ K + FW Sbjct: 1 MKKFTALLVVALMTVVMLSACGSNNSDGSSKSGTDNGGTKASGDKIYIPIISKGFQHQFW 60 Query: 40 VDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMP 99 +K G E A V + +E Q+++ + +K I FA L S V Sbjct: 61 QAVKAGAEKAATEFNVEITFEGPETEAQVDKQIEMLQAALDKKPSAIGFAALDSQASVPL 120 Query: 100 VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEV 159 + +A GI ++ D +D D T+NVA A A + + +G EG E+ Sbjct: 121 LQKAKAAGIPVIAFDSGVDSDIPITTAS-------TNNVAAAALAADKMAELIGGEG-EI 172 Query: 160 AIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIK 218 +I + +G RR+G K K IK+V Q D +K+ D+A ++Q +PNIK Sbjct: 173 GVIVHDQTSVTGVDRRDGFVNRIKEKYPNIKIVDIQYGGGDHLKSTDLAKAMIQAHPNIK 232 Query: 219 AIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGAT 278 + +N+ A+GV AV K G++ V+G D +++G M + QNP IG Sbjct: 233 GFFGSNEGSAVGVINAVTELKKEGQITVIGFDSGKAQIDAIKSGVMAGAITQNPVGIGYE 292 Query: 279 GLKLMVDAEKSGKV 292 +K V+A + KV Sbjct: 293 TVKAAVEAIRGEKV 306 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 14/314 (4%) Query: 1 MNKYLKYFSGTLVGLMLST--SAFAAAEYAVVLKTLSN-PFWVDMKKGIEDEAKTLGVSV 57 M K + L + SAFAA ++ V +++ +V +K EA +V Sbjct: 1 MKAISKLALACAISLATISTGSAFAADKFVVGYANMADTDVFVMARKNAFIEASKSDPAV 60 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 ++ S + D QL ++ + I P+ +V V +A + GI ++ L Sbjct: 61 EVNFSDANNDVSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIAL---- 116 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 ++ G FV + N+ G ++ + L +G ++ +EG G + + R+ G Sbjct: 117 ----GIQSAGGKYTFVGSKNIDAGRLQGEYMKEHL-PKGAKILYLEGTPGLSHTQERKKG 171 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 +A + S + +AS A++DR + + V + +Q P AI AND MA+G +A+ Sbjct: 172 FEDALGR-SDVTTLASLSANYDRAEGMKVTEDWIQSFPKFDAIVAANDQMALGALEALQG 230 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 A + V++ G DG +A ++AG M+ T+ Q+ A ++ V+ K G+ P +K Sbjct: 231 ADRLKGVMISGVDGTADALNAIKAGTMSQTIFQDAAGQAKAAFEV-VEGLKKGEDAPAEK 289 Query: 298 APEFKLVDSILVTQ 311 F + V Q Sbjct: 290 LVPFASITKDNVGQ 303 >UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU6_PAESJ Length = 330 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 121/290 (41%), Gaps = 13/290 (4%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 ++ + NP+W +++G + A+ G+ ++ + P+ D + +++ E Sbjct: 47 QLHLVLISQEYDNPYWRLVQQGAREAAQQKGIELE-YLGPARADVKEHIKILEMAIASKV 105 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 GI L + A + GI ++ +D A+V TDN A G Sbjct: 106 DGIITQGLEENEFTPIINEAARMGIPIITVDSDAPH-------SKRVAYVGTDNYAAGYM 158 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 +I K EVA+I G ++ + R G +A K I ++ ++ RI++ Sbjct: 159 AGRELIAKSAGR-AEVALITGSFTASNQKDRVRGFKDAVKTYPGIHIIDIAESNISRIQS 217 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG---KTGKVLVVGTDGIPEARKMVE 260 A + Q+ P I + +G+AQ + G + ++ D +PE ++ Sbjct: 218 AASAYTLAQKYPEIDTFVGTSALDGLGIAQMLKEMGSETLKTPIRIIAFDDLPETLTLIN 277 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 G + +T+ Q P +G + L++D K K++ + + K++ +T Sbjct: 278 QGVIESTIVQQPFIMGRESVNLLMDYLKGEKIVTVYNT-DVKVIHREDLT 326 >UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQT3_9CLOT Length = 354 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 97/280 (34%), Positives = 141/280 (50%), Gaps = 12/280 (4%) Query: 32 KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 91 KTL+NP+W+ + + A LGV + I E D + Q+ + E K I + Sbjct: 56 KTLNNPWWISVSDFAQQTADNLGVDLTIAIPQEEVDLEKQVSMIEAAIEKKADAIVVSAA 115 Query: 92 SSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDK 151 SS ++ + +A + GI +VN D +I ++ ++AFV D+VA K +I ++ Sbjct: 116 SSDGVIPAIKKAREAGIKIVNFDTRISDTSV------IDAFVGGDDVAGAYKAGKYICEQ 169 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 LG EG EVAII G ++G R G +A + IK+VA Q A+W KA DV TN+L Sbjct: 170 LGGEG-EVAIITGLMEQSTGVDRHAGFMQACAEYPGIKVVAEQGAEWSSDKAADVTTNIL 228 Query: 212 QRNPNIKAIYCANDTMAMGVAQ-AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 NPN+KAI+ ND MA+G+ A A K +++VG DGI +A M G + A V+ Sbjct: 229 TANPNVKAIFACNDQMAVGMVNAAKAAGKKADDLILVGYDGILDAVNMTMDGDLDAFVSL 288 Query: 271 NPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 D GA G+KL + L D LVT Sbjct: 289 PNLDEGAMGVKLATALVMNSD----YHYDREILYDCTLVT 324 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 12/307 (3%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 L S L S + ++ KT SNP++V +++ + +A G + A Sbjct: 16 LMAGSLVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAF 75 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 +GD + Q+ E++ + KGI P SS ++ + +A G+ ++ LD D ++ Sbjct: 76 DGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDA-- 133 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK 184 V+A TDN A G ++ LG +V +++G G R +G E F Sbjct: 134 ----VDATFATDNKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGL 189 Query: 185 ASQ-IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 ++V + + D+ KA N+LQR P + A+Y N+ A G QA+ G+ + Sbjct: 190 TDNSPEIVGQENTNGDQTKAQTAMENLLQRAPGVNALYTINEPAAAGAYQAIQAVGRADQ 249 Query: 244 VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 V + DG V+AG++ ATV Q PA + G++ +V + G K F Sbjct: 250 VTIGSIDGSCTGVADVKAGKIGATVMQFPAKMAELGVQAVVKFAEDGT-----KPSGFND 304 Query: 304 VDSILVT 310 S L+T Sbjct: 305 TGSELIT 311 >UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic component n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK7_ANOFW Length = 332 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 127/287 (44%), Gaps = 11/287 (3%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 ++ + NP+W +++G ++ K V+++ + P Q++L E Sbjct: 53 PHVILISQEFDNPYWRKIEQGAKEAGKNYDVNIE-YIGPLRTSVDEQVKLLEKAIASRVD 111 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI L + + +A + I ++ +D A+V T+N G Sbjct: 112 GIIVQNLKDEAFIPLIDKAISRNIPVITIDADAPK-------SRRIAYVGTNNFEAGQLL 164 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 ++ ++ E E+ ++ G + + R G + ++K+V+ ++ RI+A Sbjct: 165 GKAVVSRVEGE-RELGVMIGTDTSENQRLRLQGFLSVIAEHPRLKVVSVASSNISRIQAS 223 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 A +L+++P+I + + A+G+ A N + + + G D + E + ++ G + Sbjct: 224 IQAEQMLRKHPHISVMVGTSALDAIGIRMATKNLHRQ-DIQIFGFDDVEETIEAIQQGDI 282 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ATV Q P D+G + +KLMV+ SGK I + +++D V Q Sbjct: 283 VATVVQKPYDMGYSAVKLMVEHL-SGKQIQKEHFTAIEVIDRQNVQQ 328 >UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Pasteurellaceae RepID=B0URJ4_HAES2 Length = 311 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 17/313 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAV--VLKTLSNPFWVDMKKGIEDEAKTLGVSVD 58 M K + GL+L++ A A Y + + + ++ + ++ + D V Sbjct: 1 MKK--TLLAMLCGGLLLTSQAVIAKNYVIGAPMNSFADKWQTYLQDAVRDF-DEKHDDVQ 57 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 I + S D Q+ L ++ ++N + P + A K GI L+ ++ K + Sbjct: 58 IKLADSNSDPNIQVNLVQNFIDQNVDALLVVPTDPTVVKRIGVLAKKAGIPLIVVNRKPN 117 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 ++++ V +FV +D + G +FI++ L + E I+ G G + R G Sbjct: 118 DEHMQY----VTSFVGSDEIEGGRIQGNFIVNTLAGKNAESLILLGPLGQDAVTKRTQGN 173 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 E F + IK+V+ Q W+R + L +A NVL N I I ND MA+G A Sbjct: 174 EEIFAQHKNIKVVSKQEGRWERDRGLAIAENVLAGNKGINVIVSNNDEMAIGAILATRKL 233 Query: 239 G-KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G K + +VG D P+A + + G + ATV Q+ G TG ++ A K KV Sbjct: 234 GIKDEDITIVGLDATPDALEYLGKG-LDATVFQSAQGQGYTGAEMAYLAAKGEKV----- 287 Query: 298 APEFKLVDSILVT 310 P K V LVT Sbjct: 288 -PSVKWVPFELVT 299 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 14/294 (4%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + + L NP+W G+ A+ G+ V I + + Q Q+ DL N Sbjct: 36 AKDPLKIGYSVYDLQNPYWQSYAAGVRAGAEEAGIEVVI--ADQKSSQQEQVSGSLDLIN 93 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + + P+ L + A + I +V D + G+ + ++ ++N Sbjct: 94 QGISALIITPVQPSALPSTIDAAHGEKIPVVVADIGTE--------GDYDGYILSNNYEG 145 Query: 141 GAKGASFIIDKLGAEGG--EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G A +++KLG G +V +IE AG+ GE R +G + + ++V+S + Sbjct: 146 GRLAAEHVVEKLGGTPGPHQVGVIELHAGSVVGEERVSGFVDRLGEEENFEIVSSLDGND 205 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEAR 256 A ++L NP + IY AND A+G ++A+ AG + ++G DG A Sbjct: 206 TVDGGFTAAQDMLSANPELDVIYAANDDSAVGASRAMETAGVSVANGFTLIGFDGSDPAL 265 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 ++E G M+ TVAQ+P G ++ + D+A + +VT Sbjct: 266 DLIEQGVMSGTVAQDPFGQGQKAVETALALLNGEDPGYSDEATKTIYFPVEMVT 319 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 21/308 (6%) Query: 6 KYFSGTLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 ++ L L+L A +E V L T + F+ ++++G+++EA + + Sbjct: 10 FWWLAALCALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQ--KLTV 67 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 E D Q E+ + + I P S + +ARA + I + D Sbjct: 68 RLDAGEFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTAD----- 122 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 ++ G V + + +DNVA G + +L G +VAII+ + S R G Sbjct: 123 --IRAKEGAVVSHIASDNVAGGRLAGEYAAKRLNGRG-QVAIID-QPYIQSVIERVRGFE 178 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 EA K I++VA D R ++L A ++LQ + A++ ND A GV A+ AG Sbjct: 179 EALKPYPNIRVVARLTGDGVRDRSLKAAEDLLQSQRKLDAVFAVNDESAFGVVSAIEAAG 238 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 + G + V+G D EARK++ G+ + A +AQ+P IG ++ V +G+ + Sbjct: 239 RKG-IFVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIR-AVATHLAGQPVEPVI 296 Query: 298 APEFKLVD 305 +LVD Sbjct: 297 PVPVRLVD 304 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 129/306 (42%), Gaps = 15/306 (4%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLK--TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 S G + ++A +Y + + L P+ V M I A+ ++ + + Sbjct: 16 VSVLAAGTVTVSAAEKKDKYVIGMSQCNLGEPWRVAMNDQIAMAAEKH-PEFEVIFADAA 74 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 D Q+ E+ I +P + L V+ A+ GI ++ LD KID Sbjct: 75 QDNSKQIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVILLDRKID------- 127 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 G F+ DNV +G +I D L +GG+V I+G G + G R NG E KK Sbjct: 128 GDKYTQFIGADNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGIDRDNGFREGIKKN 187 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 +I++VA ADW R KA+ VA +LQ N I ND MA G A NAG+ G +L Sbjct: 188 DKIEIVAVNNADWLREKAITVAEEMLQTNDEIDLFLALNDPMAEGAYIAAKNAGREGDIL 247 Query: 246 VVGTDGIPE---ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 VG DG+P + V G+++ T G ++ GK + + Sbjct: 248 FVGFDGLPTPDGGIRSVMDGRLSMTQVYPTG--GTEAIESAYQLLVEGKELDKTLTLTSE 305 Query: 303 LVDSIL 308 +V Sbjct: 306 IVTPDN 311 >UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQW7_9CLOT Length = 354 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 9/286 (3%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 A AV+ K+L +W ++ G + G ++D + ++ D + Q++L ED + Sbjct: 61 AEKVIAVIPKSLLFDYWQYVRIGAQSAGLDEGYAIDFQGTRTDTDLEGQVKLVEDFIQRG 120 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 I +P++ +V + +A GI ++ +D K++ D + + V+T++ A G Sbjct: 121 VSAIVISPVNPDGMVPVLQQAEDAGIPVIIMDGKLNADFPR-------STVSTNDEAAGK 173 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 A + + G GG AI+ G R G ++ K++ + DR + Sbjct: 174 FAAEKLKELAGDAGGTFAIVSAVPGAVQEGGREKGFSDELGTYPNYKIIGTYYGKGDRNQ 233 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 ++ ++L NP+I Y N+ + GV V K+ V D E + G Sbjct: 234 TYNITQDILTSNPDITGFYTVNEGSSAGVTLGVREGDLKEKIF-VAFDPSTEVLDAIRDG 292 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP-EFKLVDSI 307 + VAQNP IG T + + V P + +D++ Sbjct: 293 YVDGAVAQNPYLIGRTAVLNAIKVLNGETVEKKIDVPVTWVTIDNL 338 >UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMU2_9FIRM Length = 369 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 9/293 (3%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + A+ + ++ N +W +G + A + GVS D+ S D QLQ +D + Sbjct: 50 SDYHLAICIHSMDNEYWAQEAEGAKLAAASYGVSADVLTCDS--DDNKQLQGIKDYIAQY 107 Query: 83 YK--GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 P S+ N + G Y+ L + D K + A + D++A+ Sbjct: 108 GDKAVFVVDPSSTANTANIAELCEESGNYVAILAHRADGLYPKDYP-HFVASLMLDDIAI 166 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G A + + +G EG +VA ++G G+ S R EA K I++V SQ A W + Sbjct: 167 GKATAKALFESIGGEG-QVAELQGLLGDDSATNRHKAFEEALKDYPNIEVVDSQTASWSQ 225 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 +A+ + N L + P++K +Y ANDTMA+G +A+ N G GK++V G DGI A V Sbjct: 226 SEAMTLTENWLVKYPDLKGVYSANDTMALGAVEALKNKGLNGKIMVSGCDGIEAALNAVN 285 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV--DSILVTQ 311 G M T A N I G + A GK+ P +L+ + LVT+ Sbjct: 286 DGDMVITNANNGYMIAGYGASYAIQAAL-GKLDPTTIPDNERLIFCKTTLVTK 337 >UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J484_9BACL Length = 329 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 129/308 (41%), Gaps = 16/308 (5%) Query: 5 LKYFSGTLVGLMLSTSAFAA-------AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 + +G L+ L+ S + + +++K +W K G E AK V + Sbjct: 13 ILLMAGALITLLSSCGGPGSGADHQQIYDVDMIVKMDRGDYWKTTKLGAEVAAKEFNVRL 72 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 + A +E D + Q++L E+ + I A L R I ++++D ++ Sbjct: 73 NFVAPENENDVEGQIRLMEEAIERRPDAIILAASDYEALGQVTDRTSYYDIPVISMDSEV 132 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 A V+ FV T+N G K A ++D G E+ II G + R G Sbjct: 133 -------ASTKVKTFVGTNNYEAGQKAAERLVDLTGPVS-EIGIINFVKGARNANQREEG 184 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 + + + +V Q D A + ++L+R PN+ I + ++G +AV Sbjct: 185 FLDYVARFPDVHVVDIQYCGSDEYLAYKLTADMLKRFPNLNGIVSLSAESSIGAGRAVDE 244 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G GKV ++ D PE ++++ ++ A V QNP + G + V A + K+ Sbjct: 245 LGYGGKVKMIAFDNPPEMLELLQEEKVQAMVVQNPFNNGYMAVAAAVQAARGEKLED-RI 303 Query: 298 APEFKLVD 305 + KL+D Sbjct: 304 PTDTKLID 311 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 10/288 (3%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 A + V KTL+N +W + +G + A LG+ A+ SEGD QL + E+L ++ Sbjct: 54 AAGTKVGGVSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQ 113 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + + F+P + NL+ V A G+ ++N+++ + +V G Sbjct: 114 GFNALLFSPQTDANLIPAVEAATAAGVPVLNVNDAVIPSAAN--------YVGNVQKGNG 165 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 A++ I +GG+VA+IEG+ G + R G TE + ++VAS PA+W R Sbjct: 166 VNVANWFI-ANRPDGGKVAVIEGQPGVYAAGQRTAGFTETITAGGKFEVVASVPANWSRE 224 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +A + A+ +LQ+ P++ Y ND MA+GV +AV AGK +V V GTDGI +A V A Sbjct: 225 EAFNAASTILQQYPDLIGFYANNDGMALGVVEAVKAAGKAEQVAVFGTDGISDAYAAVRA 284 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G +T TV P G +++ + +G+ +P A L+ V Sbjct: 285 GDLTGTVDSFPVLTGEIAMEVALR-LMAGQDLPRVVATPQALITKDNV 331 >UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasmic component) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C460_9PLAN Length = 321 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 15/292 (5%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 ++A + + +T++NPF+VD+ +G++ E + G + I ++ + Q DL Sbjct: 34 STADSGRLFGASFQTMNNPFFVDLGEGLKKELEANGDRLVIL--DAQFNSLKQKNDLSDL 91 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 +N GI P++ L + A +K + ++ +D + + + + V +DNV Sbjct: 92 ILQNVAGIFVNPVNWEGLKGSLLEANRKKVPIIIVDAPVKKADEEL----IVCTVASDNV 147 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G A + K+ + V + + N + R G +K ++K++ Q A Sbjct: 148 RAGELAAQALA-KVNPKARLVVL--HLSVNKACIDRVAGFKTELEKHPEMKILDVQEAQG 204 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 A V +++ R P++ A++ ND A+GV A+ +A K +V +V DG K Sbjct: 205 TTEGARPVMRDLIGRYPDLDAVFAINDPNALGVISALDSANKLDQVTIVTVDGSQAGIKA 264 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 ++AG++ +T AQ P +IG + M+ K P++K + ++ L+T Sbjct: 265 IQAGKLHSTSAQFPREIGKIAAEKMLAHLKGE---PVEKDVKVRV---ELIT 310 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 12/288 (4%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 AE +V+++T N F + ++ + + I S+ D +Q+ E+ Sbjct: 66 PAEVSVIIETFDNTFASFVMNAMKKYEEEHKDKIHITYLDSKQDANTQISQVENQILNGT 125 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 + I + + V + G+ L+ + + N ++FV D G+ Sbjct: 126 QAIICLAVDAKQSEPIVRACKEAGVPLIAFNRIFE---------NCDSFVGADGAVAGSL 176 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIK 202 A F +K G +G VAI+ G G + RR+ E + +++V DW R K Sbjct: 177 LARFTGEKTGGKG-NVAIVNGIMGQENQFIRRDAIVETLGEMYPDMQVVIEGAGDWKRDK 235 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 AL + LQ +I AI C ND MAMG AV AGK+ ++V G +G P+ V G Sbjct: 236 ALQLVETWLQSGTDIDAILCLNDDMAMGTQLAVEQAGKSDDIIVCGVNGDPDGINAVRDG 295 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 ++ ATV QNP L+ + K P F+LV + V Sbjct: 296 KIAATVFQNPDRQAEEALEAALQYIHGEKPESKIMIP-FELVTADNVD 342 >UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=A1AYL7_PARDP Length = 348 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 92/286 (32%), Positives = 149/286 (52%), Gaps = 10/286 (3%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + V K L+N +W + +G ++ GV + A+PSEGD QL + E++ + Y Sbjct: 55 GTQIGGVSKALTNEYWRSLGEGYKNMTDAQGVGLAYQAAPSEGDQLGQLSIAENMILQGY 114 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 +G+ +P + NL + A +GI +VN+++ + + G V DN G + Sbjct: 115 QGLLVSPQTDNNLQPAMETAASRGIAVVNVNDAVIPSATQYVGN-----VQRDN---GVR 166 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A + ID GG+VA IEG+ G + R +G T +A ++VAS PA+W R +A Sbjct: 167 VAQWFIDN-RPGGGKVAAIEGQPGVFAAGQRTDGFTTTITEAGNFQVVASVPANWSREQA 225 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D A+ +LQ++P++ Y ND MA+GV +AV A +V V GTDGIP+A + AG Sbjct: 226 YDAASTILQQHPDLIGFYANNDGMALGVVEAVKAANLQEQVSVFGTDGIPDAYASIRAGD 285 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 +T TV P G +++++ +G+ IP A L+ + V Sbjct: 286 LTGTVDSFPVLTGEVAMEVVLRLL-AGQGIPRVVATPQALITADNV 330 >UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3_BACV8 Length = 908 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 16/293 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDI 59 M K+L + L+G++ S S Y V + + + M I EA GV V+I Sbjct: 1 MKKHLLFLILCLMGILTSCSQKHTRYYIGVSQCSDDEWRHKMNHEIVREALFYDGVEVEI 60 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 ++ + ++Q++ ++ + AP + + V +A+ GI +V +D KI Sbjct: 61 RT--AKDNSRNQIEDINYFIDRKVDLLIVAPNEAAAVTPVVEKAYGLGIPVVVIDRKILS 118 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 D AFV DN +G +I+++LG +G ++ I G G+ R G Sbjct: 119 DR-------YTAFVGADNCEIGKDVGQYIVNRLGGKG-KILEITGLEGSTPAMERHRGLA 170 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 +A K I++ AS W + A + ++LQ N I ++ ND MA+G + Sbjct: 171 DALKAEPGIEITASVDGAWLQSVAGEKMDSILQDNKGINLVFAQNDRMAVGAYLSARQRQ 230 Query: 240 KTGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 ++L VG D +P + V G + AT G +++ +D + Sbjct: 231 LEKEMLFVGIDALPGKGYGVEQVLEGVLDATFIYPTG--GDKVMQVAMDILEK 281 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 135/305 (44%), Gaps = 15/305 (4%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 + L+ + A + A++ + NPF+ +G + +A LG + + + + D Sbjct: 10 LTAALISMAGVAGAASNGLIAIITPSHDNPFFKAEAEGAKAKATELGYTTLV--ASHDDD 67 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 Q QL E + K I S + P+ +A GI +D +I+ G Sbjct: 68 VNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREINE------TG 121 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 + + ++N GA + +G +G + ++ G+ + + R G + + S Sbjct: 122 IAVSQIVSNNYQGAQLGAEKFVTLMGGKGKYIELL-GRESDTNAHVRSQGYHDVIDEHSD 180 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 +K+VA Q A+W + +A + ++LQ NP+I + NDTMA+G A+ AG+ V+VV Sbjct: 181 MKMVAQQTANWSQTEAFNRMESILQANPDITGVISGNDTMALGAEAALKAAGR-NDVVVV 239 Query: 248 GTDGIPEARK-MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 G DG R ++ G + ATV Q + K+GK E +L+D Sbjct: 240 GFDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTGKT----GLEEKQLMDC 295 Query: 307 ILVTQ 311 +L+ + Sbjct: 296 VLIDE 300 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 128/292 (43%), Gaps = 20/292 (6%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + + L+ P+ V M + I A+ + D+ + + D Q+ E+ K Sbjct: 47 SKYTIGMSQANLAEPYRVRMDEDIRKAAEKV-PQFDVQFADAAKDNSKQVSDVENFMTKK 105 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 + +P + L V +A+ +GI +V LD K++ G ++ DNV +G Sbjct: 106 VDLLMISPNEAAPLTDVVKKAYNEGIPVVVLDRKVE-------GEAFTTYIGADNVQIGR 158 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 + + + L +GG++ ++G +G+ R G E S+I++V + +W+R Sbjct: 159 QAGEYFKNTLLPQGGKIVQLKGLSGSTPAAEREKGFMEGIA-GSKIEVVDTADGEWERSV 217 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP---EARKMV 259 +L+ +P+I+A+Y ND MA G A AG+ + VG DG+P K V Sbjct: 218 GQQKMDALLKAHPDIQAVYAQNDPMAEGAWLAAQAAGRK-DLKFVGIDGLPIESGGIKAV 276 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 E G+++AT G ++ I P+ + + + LVT+ Sbjct: 277 EQGRLSATNLYPTG--GEEAVEAARKLL-----IDCQPVPKEQTLPTELVTR 321 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 87/301 (28%), Positives = 135/301 (44%), Gaps = 20/301 (6%) Query: 1 MNKYLKYFSGTLVGL-MLSTSAFAAAE-------YAVVLKTLSNPFWVDMKKGIEDEAKT 52 M K + + L + SA AA + V + S P +V +++ +E EAKT Sbjct: 1 MRKVTYLMTTLAIALSTFAFSANAAPKGKDAPVTILVSALSYSFPHFVFLQEQLEAEAKT 60 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 LG +V I S + Q+ E + GI AP + L + A K+GI +V Sbjct: 61 LG-NVKIIRSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVT 119 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 +D ++ V A V DN+ + ++KL +G + ++G G+ + Sbjct: 120 IDRPVN------GVPEVIANVAADNLIGAQRQGEA-VEKLFPQGATIINLQGIPGDKTAN 172 Query: 173 ARRNGATEAFKKASQI-KLVASQPADWDRIKALDVATNVLQ--RNPNIKAIYCANDTMAM 229 R G + K ++ K VA Q A ++R + L V N+L NP I ND A+ Sbjct: 173 DRSKGVHDTLDKHPELYKFVAEQTARFNRDQGLSVTENLLTGLANP-PTVIVAGNDDSAL 231 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G AQAV G GK+ + G DG +A K V G +T TV Q P G +K++ D ++ Sbjct: 232 GAAQAVEARGLKGKIAIFGYDGSTDALKAVRDGVLTGTVDQYPGKQGREAVKILTDYIRT 291 Query: 290 G 290 G Sbjct: 292 G 292 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 137/306 (44%), Gaps = 20/306 (6%) Query: 1 MNKYLKYFSGTLVGLM---LSTSAFAAA--------EYAVVLKTLSNPFWVDMKKGIEDE 49 M K + LS + E A+V K S FWV + +G +D Sbjct: 1 MKKSKYIALAAVAAFTVAPLSACGAGQSNGSESKNYEIAMVAKGFSQSFWVSVHQGADDA 60 Query: 50 AKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIY 109 A G +V ++ Q + ++ NK+ +A APL L V A I Sbjct: 61 AAKYGATVTFNGPDNDSQVDKQADMVQNAINKSPDAVAIAPLDEAALTPAVQSAKSASIP 120 Query: 110 LVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNA 169 L D + + + + V T N VG A +I L +G + A+I +A Sbjct: 121 LFAFDTAFETNADA-----ITSTVKTSNREVGKVAAENLIALLNGKG-KYAVIAHSQTDA 174 Query: 170 SGEARRNGATEAFKK-ASQIKLVAS-QPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 + RR+G + KK A +++V Q ++ D+ KA D+A+ +LQ NP++ AI+ N+ Sbjct: 175 TSTERRDGFLDYMKKNAPDMEMVGEVQYSNADQAKAQDIASAILQANPDLDAIFATNEAT 234 Query: 228 AMGVAQAVANAGKTG-KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 +G A V +A K+G KVL+VG D ++ + G ++ +V+QNP IG ++ V + Sbjct: 235 VVGAATPVESALKSGHKVLLVGVDSGKAQQQYIRDGVISGSVSQNPYQIGYKTIENAVKS 294 Query: 287 EKSGKV 292 K+ Sbjct: 295 LNGEKI 300 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 86/296 (29%), Positives = 128/296 (43%), Gaps = 20/296 (6%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS-VDIFASPSEGDFQSQLQLFEDL 78 S V L LSNPF+V M +G E EAK +G V + S D Q E+ Sbjct: 55 SPHKLRSVGVTLGDLSNPFFVVMAQGAEKEAKKIGGEDVRVTVVSSGYDLNQQFNQIENF 114 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 N I S + V +A + G ++ +D I+ D ++A VTT+NV Sbjct: 115 VAANTDLIIINAADSKGIRPAVDQARQAGKVVIAVDTAIEAD--------IDATVTTNNV 166 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQPAD 197 G +I D+L +G V I+ G S R +G + K IKL++ Q A+ Sbjct: 167 QAGEISCQYIADRLKGKG-NVVIVNGPP-VTSVIQRVDGCLKVLAKYPDIKLLSKDQNAE 224 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 R L V +++L P I A++ ND +GV A A K +VG DG PEA + Sbjct: 225 GSRDGGLRVMSDLLVTFPKIDAVFAINDPSGVGVDLAANQA-KRQDFFIVGVDGAPEAIE 283 Query: 258 MVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + +G AT QNP + T +++ D K L+ + L+T+ Sbjct: 284 AIASGDSLYAATATQNPRGMTQTAIQVGNDILHGKK-----PESPNILIPAKLITK 334 >UniRef50_C1D5Z3 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5Z3_LARHH Length = 332 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 9/310 (2%) Query: 6 KYFSGTLVGLMLSTSAFAA---AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 K + T S A A+V+K+LSNP++++M+KG + + A Sbjct: 27 KIEAVTTASAASPESGKATGNLPRIALVMKSLSNPYFIEMEKGARQAQTENRAELFVKAV 86 Query: 63 PSEGDFQSQLQLFEDLSNKN-YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 E Q+Q +D+ N I P S L +ARA K GI+++NLD ++D D Sbjct: 87 GLETSIDQQIQFIDDIINNKLADAIIIVPADSSRLAPVIARAHKAGIHIINLDTRLDADA 146 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 L + G F+ DN K A+ + L + EVAIIEG + + R GA +A Sbjct: 147 LAQEGIGPLPFIGVDNHRAAYKAAAHLAASLPPKS-EVAIIEGNSNAINALRRSEGARQA 205 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 + A ++LV SQ + W +A ++ N+L++NP ++ IYC +D +A+GV + +A+ G Sbjct: 206 LEAA-GMRLVPSQSS-WTIEQAYEITGNLLKQNPELRGIYCISDLIALGVIRYLADHGIR 263 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 +V V G DGI +AR + + QM ATV Q PA+ G +K +DA +GK + E Sbjct: 264 -QVKVAGFDGIAQARAALASNQMVATVDQRPAEQGYLSVKAALDAI-AGKPVTGQIKVET 321 Query: 302 KLVDSILVTQ 311 +L+ V Q Sbjct: 322 ELLTRTSVRQ 331 >UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridia RepID=A4XG54_CALS8 Length = 345 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 20/297 (6%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 EY +V +W KG++ A GV I+ + D Q+ + + K Sbjct: 47 KEEYYMVTFASGIEYWKGCFKGMKAAADLYGVKA-IYTGAPQFDVNQQVTVLRQVIAKKP 105 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 GI + L P+ A KKGI ++ D + + T N GA Sbjct: 106 AGILVTCANPDALKAPIDEAIKKGIPVITFDAD-------SPKSLRYSVLETGNYNAGAM 158 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIK 202 A ++ LG +G I A + E R+ G + KK IK+V+ + D K Sbjct: 159 AARYLGKLLGGKGE--VGISTVAAQLNHEQRKQGFIDTLKKEFPGIKVVSIVNDENDSTK 216 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A +LQ +PNIK I+C + +GVA A+ A K GK+ +V D +++ G Sbjct: 217 AARGVAAMLQAHPNIKGIFCTDAPGGVGVATAIKEANKVGKIKIVSFDTDKGTLDLIKQG 276 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK--------APEFKLVDSILVTQ 311 + A++AQ ++G G+ + K G V P+D P + +++VT+ Sbjct: 277 VIDASIAQGTWNMGFWGMTFLF-YLKHGIVNPVDNWKKFGINPLPPYVDTGTMVVTK 332 >UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YAA5_DICT6 Length = 331 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 134/321 (41%), Gaps = 23/321 (7%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLG---- 54 M K+L F ++ L+++T+A + +A + K L+NP + + G A+ L Sbjct: 1 MKKFLMIFFIVVIFLLMATTAQTPKKLVFAWIPKALNNPVFELGRDGAFKRAEELSKKGP 60 Query: 55 VSVDI-FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 V++ + + D Q ++ ED+ + GIA + L+ + +A + GI ++ Sbjct: 61 YKVEVLYVASVASDATEQARVVEDVVARKVDGIAISCNDPTALIDVINKAVEAGIPVMTF 120 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEA 173 D ++ +N G A ++ +G G+VA++ G G + E Sbjct: 121 DAD-------SPKSKRFTYLGVNNYEGGKWAAKLLVRAMG-TSGDVALLTGVPGALNLEE 172 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIY--CANDTMA-MG 230 R G + KK +IK+V + D + + V +Q+ P ++ + +A G Sbjct: 173 RMRGFKDEIKKYPKIKIVTTVACYDDINRGVQVVEETMQKYPKLRGWFFVGLWPLLAERG 232 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 A K KV V D +P ++++ G + V Q G + ++ Sbjct: 233 SMPLWEKAAKAKKVFTVAFDTLPVELQLLKEGYLCGLVGQKYWGWGYDAIDILYR----- 287 Query: 291 KVIPLDKAPEFKLVDSILVTQ 311 KV+ +K P++ +VTQ Sbjct: 288 KVVNNEKFPDWIDSGMDIVTQ 308 >UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic sugar-binding n=4 Tax=Vibrionaceae RepID=Q1Z3C1_PHOPR Length = 355 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 23/319 (7%) Query: 1 MNKYLK-----YFSGTLVGLMLSTSAFAAA---EYAVVLKTLSNPFWVDMKKGIEDEAKT 52 MNK K F L+ L+ A + V + + F V+MK + A Sbjct: 41 MNKPKKAVQGVLFITGLMALVACGGEKADSNVTRIGVAIPNFDDTFLVNMKDSMSAYAAK 100 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 ++++ ++ D QL ++ + GI P+++ K GI LV Sbjct: 101 QD-NLELIFVDAKEDTVKQLGQIQNFIIQQVDGIILVPVNTDATQPMTDDILKAGIELVY 159 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 L+ + + A+V ++ + G + A + ++GG + II G + Sbjct: 160 LNRRP------TYLPDGVAYVGSEELRFGEEQAKYAASH--SDGGNIGIIMGMMTVEAAI 211 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R G + FK+ + ++ Q A W R + + V N + + I ND MA+G Sbjct: 212 LRTQGVEDFFKEKPEYNIIRKQTALWQRSQGMVVMENWINSGDKLDIIISNNDDMALGAI 271 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 QA+ AGK +V+G D P+ ++ G + ATV Q+ + + Sbjct: 272 QALRAAGKLDDTIVIGVDATPDGLMAIKNGALDATVFQDGRSQARGAIDAALSGINK--- 328 Query: 293 IPLDKAPEFKLVDSILVTQ 311 P DK + + LVT+ Sbjct: 329 TPRDKI---TWIPAELVTK 344 >UniRef50_A7II12 Periplasmic binding protein/LacI transcriptional regulator n=42 Tax=Bacteria RepID=A7II12_XANP2 Length = 347 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 86/327 (26%), Positives = 136/327 (41%), Gaps = 25/327 (7%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 + L S GL ++ A AA + +V+KT +NPF+V MK+G E A LG+ Sbjct: 6 RLLMAASVAWAGLAATSPAGAAEKPADKPIVGIVIKTSTNPFFVKMKEGAEAAAARLGLE 65 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + FA +GD +Q+ E L KGI P S +V + +A KGI ++ LD Sbjct: 66 LRSFAGKMDGDTDAQVTAVESLIAAGAKGILITPSDSRAIVPVLEQARAKGILVIALDTP 125 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA--EGGEVAIIEGKAGNASGE-A 173 +D G +A TDNV G + LGA + +VA+++ S + Sbjct: 126 LDPP------GAADATFATDNVLAGKLVGEWAAKTLGANAKSAKVALLDLNVNQISVDVD 179 Query: 174 RRNGATE----------AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCA 223 R G + ++V + N+LQR+P + +Y Sbjct: 180 RDQGFLKGFGVNVADPAVIGDEKDSRIVGHDVTLGNEEGGRRAMENLLQRDPYVSVVYAI 239 Query: 224 NDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLM 283 N+ A G +A+ + G+ VLVV DG + V+ G + AT Q P + G++ + Sbjct: 240 NEPAAAGAYEALRSIGRDKDVLVVAVDGGCPGVRNVKDGVIAATAMQFPLAMAQMGVEAV 299 Query: 284 VDAEKSGKVIPLDKAPEFKLVDSILVT 310 + G +F LVT Sbjct: 300 LKYATDGTKPKPADGQDFVNTGVELVT 326 >UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KYA7_9FIRM Length = 281 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 10/286 (3%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVD-IFASPSEGDFQSQLQLFEDLSNKNYKG 85 A+ + ++N F + ++ EA+ LG + D + D +Q+ E G Sbjct: 1 MALFMSHMTNEFVKTLSSSVQKEAEELGYTGDSFKIYDGKNDVATQVSQIEQAVTLGVDG 60 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I P+S+ +V V A K G+ +V L+++I N + FV DN + GA Sbjct: 61 IIIEPVSTDGIVKAVKDAEKVGVKVVILNQRISDQNA------ADTFVGADNESTGAALM 114 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +++ L +G + + G G+ R G + +K++AS ADWD KAL Sbjct: 115 KKVMEDLDGKG-NIVELLGPMGSDGQVGRSKGFDSVLAEYPDVKVIASDSADWDTAKALT 173 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 + N L +I+A+ ND MA+G AQA+ AG T K+ V G D + + G MT Sbjct: 174 LTENWLTS-SDIQAVVAQNDGMAVGAAQAIKEAGLTDKIKVYGVDATSDGLNAIVNGGMT 232 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 TV+Q + G L + G+ +P + + V + Sbjct: 233 GTVSQGTENQGKISADLCSNLI-YGQSVPKEVIATNVVYTKENVNE 277 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 81/302 (26%), Positives = 129/302 (42%), Gaps = 16/302 (5%) Query: 1 MNKYLKYFSGTLVGLML--STSAFAAAEYAVV--LKTLSNPFWVDMKKGIEDEAKTLGVS 56 MN+ + G M+ + S FA + ++ + L PF+V M I+ EA+ GV+ Sbjct: 21 MNRREFLLTSVAAGAMVLAAPSVFAEDKLTILGSVPNLGFPFFVHMLNEIKAEAQAQGVN 80 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + S + Q E + I +PL L + A K G+ +V +D + Sbjct: 81 LT--ESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGVPVVTIDRR 138 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 +D + A V DNV G AS ++ G ++ ++G+ G R Sbjct: 139 VD------GVQGILAHVGADNVKGGEAEASAMVAAF-PNGAKLFHLQGQPGAGPAIDRNK 191 Query: 177 GATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G + +++ Q A++ R +AL V L N AI CAND MA+G +A Sbjct: 192 GVHNVLDPLKDKYQIIFEQTANFARAEALSVTEAGLAANGKPDAIICANDDMALGALEAC 251 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 A T V + G D +PEA V G++ TV Q P T +++ V K+ K P Sbjct: 252 AARNFT-DVKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAVAYAKN-KTEPK 309 Query: 296 DK 297 +K Sbjct: 310 EK 311 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 14/293 (4%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 A AE V LS PF+V M++ +EDEA LGV V + ++ + Q+ + + + Sbjct: 36 AEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVL--DAQNNSSKQISDLQAAAVQG 93 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 K + AP S L ++G+ ++++D I G V DNVA G Sbjct: 94 AKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNI------AGGKTAVPHVGADNVAGGR 147 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDRI 201 A +++ G V +I G++S R G + K+V Q A+ R Sbjct: 148 AMADWVVKTY-PAGARVVVITNDPGSSSSIERVKGVHDGLAAGGPAFKIVTEQTANSKRD 206 Query: 202 KALDVATNVLQRNPN--IKAIYCANDTMAMGVAQAVANAGK-TGKVLVVGTDGIPEARKM 258 +AL V N+L + I C ND MAMG +AV AG + KV V+G D IPEA Sbjct: 207 QALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFDAIPEALAR 266 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++AG+M ATV QNP T L+ VD KSG + L+ S +T+ Sbjct: 267 IKAGEMVATVEQNPGLQIRTALRQAVDKIKSGAALKSVSLKP-VLITSGNLTE 318 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 122/295 (41%), Gaps = 13/295 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE----YAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 M + + V L S + A A+ + +P + M KG E A G Sbjct: 6 MGRRIVLGLIASVALAGSLAVPAQAQEMKTIGWSVAYFDHPVYQLMMKGAEKVADEAGCK 65 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 V + + D Q ++ + GI P S L+ V + GI LV D + Sbjct: 66 VIF--ADGKDDPSVQASHIDNFIAQGVDGIILTPTVSDPLIPAVKKVNDAGIPLVMADRR 123 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 + EA V+ D V G G + +G +G + ++EG G S R N Sbjct: 124 MQTHGQP---IKWEALVSWDMVKSGTIGGEQTVKAIGGKG-NIVVVEGTPGAGSTIDRGN 179 Query: 177 GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP--NIKAIYCANDTMAMGVAQA 234 E +K IK++A PA+++R K +V N+LQR I AIY D M G QA Sbjct: 180 AFYEVIEKYPDIKILAKIPANFNRAKGQEVTENILQRFKPGEIDAIYYMADEMTFGGLQA 239 Query: 235 VANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 + AG+ G+ ++ DG EA ++ A ++ +P D A ++++ D Sbjct: 240 IKAAGRLGEFKIISVDGQKEAMDLLRAREIDYEAIFHPDDQ-AVAVRILCDIVNG 293 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 123/326 (37%), Gaps = 33/326 (10%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAA---------------EYAVVLKTLSNPFWVDMKKGI 46 ++L F + L L+ + + A + + + FW G Sbjct: 3 KRFLAAFLCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWYGF 62 Query: 47 EDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK 106 E +AK G + +GD + Q+ + K I AP+ + + + + Sbjct: 63 EKQAKEYGWEATLL--DPQGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVNEA 120 Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 G+ + +D + G V + + TDNV G A ++ G + +V II+G Sbjct: 121 GVPVFCVDRR--------GEGEVVSTLETDNVKAGEAMAEQLVKDYGED-VDVLIIQGVL 171 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPA-DWDRIKALDVATNVLQRNPNIKAIYCAND 225 + R G +K I +V A ++ AL N L+ NP++ I+ D Sbjct: 172 SDTPTLDRTQGVKNVLEKYENITIVGEPSAGEYSNEAALATTKNFLETNPDLDVIFTCTD 231 Query: 226 TMAMGVAQAVANAGKTGK------VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATG 279 + G+ A+ AGKTGK V + DG E K++E G + T +Q P G Sbjct: 232 ALVPGIVAALKEAGKTGKVGEENHVGIYSVDGAGEVLKLIEDGTVDGTFSQYPIQFGIDT 291 Query: 280 LKLMVDAEKSGKVIPLDKAPEFKLVD 305 +K M GKV + D Sbjct: 292 VKSMKTYLDGGKVEEKVYYNGDVVTD 317 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 87/307 (28%), Positives = 128/307 (41%), Gaps = 27/307 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE--------------YAVVLKTLSNPFWVDMKKGI 46 M K L L + AA + V L T +PF++ +K I Sbjct: 1 MKKILLVLVTMLFIFSCGSKDQAAGKTEDKPTETGEKTYTIGVSLLTQQHPFYLSLKDAI 60 Query: 47 EDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK 106 E EA V +++ S + D Q+ ED K I +P+ S ++ V +A Sbjct: 61 EKEAAAQNVKLNV--SIANQDLNKQISDIEDFITKKVDAIIISPVDSKGVLAAVKKAEAA 118 Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 I ++ +D G +V A V TDN G + L +G EVA+IE Sbjct: 119 NIPVITVDVPA-------IGVDVAAHVATDNYTGGKIAGEEMARLLNGKG-EVAVIEY-P 169 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDT 226 S R G E K IK+VA Q A R +AL A N++Q N N+ I+ D Sbjct: 170 TVDSVVQRIEGFKEVIAKYPDIKIVAIQ-AGITRPEALTAAQNMIQANKNLGGIFGFGDD 228 Query: 227 MAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV-EAGQMTATVAQNPADIGATGLKLMVD 285 A+ AV +AGK ++ V+G DG+ EAR V + A + Q P D+G + + Sbjct: 229 AALAAVAAVKSAGKEDQIKVIGFDGMQEARDAVTKEKSFAAVITQYPEDMGKIAVDTTLK 288 Query: 286 AEKSGKV 292 K +V Sbjct: 289 ILKGEQV 295 >UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional regulator n=60 Tax=Proteobacteria RepID=B2ILF2_BEII9 Length = 333 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 124/314 (39%), Gaps = 19/314 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L S LV M + A V + +L N ++V + + E +AK + V + Sbjct: 23 MIKQLLMGSAILVLAMGAAGAKDLKSVGVSVGSLGNLYFVALSQSAEAKAKEINPDVKVI 82 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S D Q ++ I A + + RA GI ++ D Sbjct: 83 TVDSNYDLNKQFNQIDNFIASGVDLILLAAADPKAIAPAIKRAQNAGIVVMATD------ 136 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 A +A V T+NV G +I+DKLGA GG++ I G +S R +G + Sbjct: 137 ---VAAVGADATVQTNNVQAGEIACQYIVDKLGAAGGQIIIQNGPQ-ISSIIDRVSGCRK 192 Query: 181 AFKKASQIKLV-ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 + +I ++ Q R + + + L R+ I A++ D A G A G Sbjct: 193 SLANNPKITILSDDQNGKCSRDEGMKIMQGHLTRHRKIDAVFTVCDPQATGSDLAAQQFG 252 Query: 240 KTGKVLVVGTDGIPEARKMVEAG--QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 + + + DG P+ K + G ++ A+ +Q+P + +++ + K Sbjct: 253 R-NEFFIASVDGAPDIEKAFKGGNTRIQASASQDPYGMAQQAVQIGYEIMNGKKPDN--- 308 Query: 298 APEFKLVDSILVTQ 311 L+ S L+T+ Sbjct: 309 --PMILMPSTLLTK 320 >UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L479_THERP Length = 357 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 23/291 (7%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 A+V K L +PF+ D +KG E +AK LGV+ + + +P + D Q+++ EDL K Sbjct: 77 TIAMVPK-LVHPFFEDCRKGGEQKAKELGVTFE-YVAPQQADPALQVKIIEDLIRKKVHA 134 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I+ +P ++ +A K+GI ++ D ++ TDN A G Sbjct: 135 ISISPNEPKSVEPVIAEGMKQGILMMTFDAD-------SPNSQRVMYIGTDNKAAGKTMG 187 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + L G +V II G G + R G E I++V Q D D K L Sbjct: 188 ETMAKLLNGRG-KVGIITGGLGALNLNQRIEGFKEGV--GPNIQVVDVQATDDDLQKGLS 244 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVAN---AGKTGKVLVVGTDGIPEARKMVEAG 262 V+ +L+ +P++ I C + T +AQ + + + GK+++V D + E ++ ++ G Sbjct: 245 VSEAMLRAHPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAIQEG 304 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS--ILVTQ 311 + AT+ Q P +G ++ D P FK +D+ +VT+ Sbjct: 305 IIAATMVQRPVQMGVLTVQWAYDILTGK------AKPPFKNIDTGVTVVTK 349 >UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFL8_9FIRM Length = 312 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 134/282 (47%), Gaps = 19/282 (6%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 VV K+ S+ +W+ + G+E A LGV V I + +E D ++Q Q+ L K+ + Sbjct: 44 IGVVTKSRSSEYWMSVCSGMEKAASDLGVKVIIMSPDTETDEKTQQQMIGSLLKKDIDAL 103 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 A +P++S N + +A +KGI +V+ D KI + ++ DN VG + A Sbjct: 104 AVSPINSHNAKGYLKKAEEKGIQVVSYDTKILEKGVP--------YIGIDNEKVGRELAQ 155 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 ++ ++ +G V II G +S +R G + K + IK+ ++ + Sbjct: 156 YMAAQMKKKGL-VGIISGNLKQSSHASRLKGFRDYIDKNTDIKIAFTESGYSNLRMPEKE 214 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 + +++ +P++ I+ + A+G+ + + + VL+ D +A V+ G++ A Sbjct: 215 ISRLMREHPDLNGIFATSAVTALGIMEYLGDR----PVLIATVDAQEDALDAVKKGKIGA 270 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 Q +IG ++ +V+ ++ K PE K++ + L Sbjct: 271 LAYQPGYEIGYETVRYIVNQKEGKK------QPEQKIIQADL 306 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 10/308 (3%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 K+ G + ++L T+A A V + + F ++ G+ D +K L V + + Sbjct: 2 KKFIIGAAMSVLLGTAAHAE-TVGVSMALFDDNFLTVLRNGMLDYSKELK-GVTLQVEDA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 + D Q ++ I P+ + A I LV ++ + + Sbjct: 60 QNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDSLP 119 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK- 183 G +AFV +D G A + LG +G V I+ G+ N + R A + K Sbjct: 120 DG---QAFVASDETVAGTLEAKEVCRLLGGKGNAV-IMMGELSNQAARMRTQSAKDVLKT 175 Query: 184 -KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 + I +V Q A+W R + D+ TN L A+ ND MA+G QA+ AGK Sbjct: 176 DECKGISVVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAAGKDM 235 Query: 243 KVLVV-GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 K VV G D +A ++AG + TV Q+ A G L + K K+ P F Sbjct: 236 KSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVYIP-F 294 Query: 302 KLVDSILV 309 +LV V Sbjct: 295 QLVTPENV 302 >UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY95_ACICJ Length = 329 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 12/286 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 A+V ++PF++ M+ G EAK LG+ + I+ S ++Q+ + L K+ Sbjct: 36 KTIALVPGIATDPFYITMQHGAAAEAKKLGLHL-IWQGGSSFSPETQIPALQALLAKHPA 94 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + AP + L+ P+ + GI ++++D I + K+ +T++NV GA Sbjct: 95 ALLVAPTNEKALINPIRQFIAAGIPVISVDTTISDTAILKSR------ITSNNVQGGASA 148 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A I +G +VA+I K G ++ +AR+ G K +K+VA + D KA Sbjct: 149 ARAIAGFAHGKG-DVAVINVKPGISTTDARQKGFLAQMKHYKGMKVVAIEYDDDSPTKAF 207 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 A +L + P++K I+ N GV +AV AGK GKV VVG D P K+++ G + Sbjct: 208 TEAQLLLLKYPHLKGIFATNVFSGEGVGKAVVAAGKKGKVDVVGYDAEPGEVKLLKQGVI 267 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + + Q PA+ G G+K D + P K + +I VT Sbjct: 268 STLIVQRPAEEGRLGVKYAYDILTGKSA----QVPASKRLANITVT 309 >UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional regulator n=24 Tax=Bacteria RepID=C5CZB4_VARPS Length = 315 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 10/292 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 A +V K + FW +K G E AK L V V +E Q+ + Sbjct: 22 AQAQQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKVKVTFEGPETEAMVDKQIDMLAAA 81 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 K + I FA L S + + +A I +V D +D D TTDN Sbjct: 82 LAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGVDSDIPVTTT-------TTDNK 134 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPAD 197 A A A + + +G + GEVA++ + +G RR+G K IK+V+ Q Sbjct: 135 AAAALAADKMAEMIG-KSGEVALVVHDQTSRTGVDRRDGFVNRIKSAYPNIKIVSVQYGG 193 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 D++K+ ++ ++LQ +PN+K I+ AN+ A+GV V ++GKV+++G D + + Sbjct: 194 GDQLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKVVIIGYDSGKQQKN 253 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 + G M + QNP +G +++ V A K K +P F D + Sbjct: 254 AIMDGSMAGAITQNPVGMGYKTVEMAVKAIKGEK-LPKVVDTGFFWYDKTNI 304 >UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Rhizobiales RepID=B5ZNU3_RHILW Length = 329 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 14/295 (4%) Query: 4 YLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 + ++ + ++FAA +++K ++ +W + G K LGV+V + Sbjct: 13 FTALAGAAVIATAMPVTSFAADVTIPIIVKDTTSFYWQIVLAGARKAGKDLGVNVPELGA 72 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 +E D Q+ + E+ + +P L P+ A K + ++ +D D Sbjct: 73 QAESDINGQISILENAVAGKPAAVVISPTEFKALGKPIDEAAKS-VPIIGIDSGADSKAF 131 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGA 178 K +F+TTDNV G A + + G E GE+ I+ G S E RR G Sbjct: 132 K-------SFLTTDNVQGGRIAADGLAAAIKEMTGKEEGEIVILTNLPGVGSLEQRREGF 184 Query: 179 TEAFK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 + K K +K++A + D L++ T+++ NP + ++ +N +A GV QA+A Sbjct: 185 LDQIKTKHPGLKVIADKYGDGQATTGLNMMTDLITANPKLVGVFASNLILAQGVGQAIAE 244 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 K+ V+G D + ++ G + V Q+P +G G+K + K KV Sbjct: 245 NKLGDKIKVIGFDSDDKTVGFLKDGAIAGLVVQDPYRMGYDGIKTALAVSKGEKV 299 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 35/328 (10%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAA---------------AEYAVVLKTLSNPFWVDMKKG 45 M + +K + + L+ + AA + ++++ +SNPF+ M KG Sbjct: 1 MKQLVKKSAVFTAAVTLAALSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKG 60 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 ++ A ++G + + ++ D +Q + + I + + + + RA + Sbjct: 61 AKEAAASIGATAN--TQDAQLDLANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQ 118 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 GI ++ +D +A V TD V G K ++ +++G +G V +++G Sbjct: 119 AGIIVIAVDTPAKS---------ADAVVMTDAVQAGEKSCQYLFEQMGGKG-NVLLVDGT 168 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 + R G KK IK+V Q + DR L V T++L P+++ I+ ND Sbjct: 169 P-LQTIRDRITGCNNVVKKFPGIKVVGQQASKNDRASGLAVTTDMLTATPDVQGIFGMND 227 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE-AGQ-MTATVAQNPADIGATGLKLM 283 A+G AV A K G V V G DG PEA ++ +G T QNPA++ +++ Sbjct: 228 PSALGAVLAVQQAHKAGTVKVTGVDGSPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVA 287 Query: 284 VDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + + A L+ S LVT+ Sbjct: 288 QNIIDNK-----PPAETTILIPSELVTR 310 >UniRef50_C0Z4C9 Putative ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4C9_BREBN Length = 328 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 146/316 (46%), Gaps = 18/316 (5%) Query: 2 NKYLKYFSGTLVGLML--STSAF-------AAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 ++ Y LV + L S SA A++++ +W +K G E AK Sbjct: 7 KRFTVYGLVFLVAVTLFYSCSASLTDVVVDKKKTVALIVRMKHGDYWRTVKLGAEMAAKE 66 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 +++ +A E D Q Q++L + + I AP L + ++ I ++ Sbjct: 67 YERNLNFYAPDYEEDAQRQMELVQQAIADGSETIVVAPSDERVLREAIKLTRERAIPILV 126 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 LD + V++++ TDN +G K ++ L + G++ ++ A+ + Sbjct: 127 LDTVGND-------SAVKSYIGTDNYDMGRKAFEKMV-YLIEKKGQIVLLGTDRIKANAK 178 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R G + + Q++LVA++ A D+ + + +++++P +K + + + A+GVA Sbjct: 179 RREQGVLDLLPREMQVELVANENAPSDKKQIGEWTRELIRKHPQLKGVIALDSSTAIGVA 238 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + + ++G KV +V D PE + ++ G ++AT+ Q P +G G+K V+A +G+ Sbjct: 239 EELESSGLRDKVKIVAIDSPPEVLEYLQEGIISATIIQKPLSMGYLGVKYAVEAS-NGEA 297 Query: 293 IPLDKAPEFKLVDSIL 308 +P K++D Sbjct: 298 VPSLVDTGTKVIDREN 313 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 14/287 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 ++ T++NPF+ ++K I E + G + D Q+ D+ + + Sbjct: 42 KFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQLITMDPA--MDVSKQIDQINDMITQGVEA 99 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + P+ + + K I ++N D ++ N V A+V +DN G Sbjct: 100 VFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNY------VTAYVGSDNKNAGKVCG 153 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++ + GG++AI+ S R G A + +VA Q D ++ Sbjct: 154 DDLVKRY-PNGGKIAILNC-PTMNSINDRIAGFKSAI-EGKNFTIVAEQDGKGDLQTSMK 210 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA-GQM 264 +A ++LQ + +I AI ND A+G A +A K K+L+ G DG P+A+K + + GQ Sbjct: 211 LADDILQSHSDIVAIMGGNDPTALGALAACKSA-KQSKILIYGVDGSPDAKKEIASGGQF 269 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 T AQ+P IG +L V F L++ V++ Sbjct: 270 VGTGAQSPKQIGVKSAELGYKVLNKQNVEKKTPVQTF-LINKDNVSK 315 >UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH93_9FIRM Length = 362 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 16/293 (5%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 A+++K +NPF + G A+ +G + + + + Q++L ED+ Sbjct: 60 TIAMIVKNNTNPFMNGVLNGFSKAAEDIGFEAMLLSPQTADSNEDQVRLVEDMIQSGVDA 119 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I P+ S +V + +AW GI ++ + + D + G A A Sbjct: 120 ICIHPVDSNGIVPALEKAWDAGIPVLVQGTQANTDKIYGWYGTKYA-------DEATLIA 172 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++ +KL +G V I G + N F+K + L+ QP +++R ++ Sbjct: 173 EYLAEKLDYKG-NVVYITGPQQAQNAIDEINATHAVFEKYPDLNLIEEQPGNFNRATSMS 231 Query: 206 VATNVLQRN--PNIKAIYCANDTMAMGVAQAVANAG-----KTGKVLVVGTDGIPEARKM 258 V N++Q+ +I + ND AMG A+ NAG + G + V G D +A Sbjct: 232 VMENLIQKYSEDDIDWVIGGNDECAMGAIAAMENAGWKLGFEDGGIGVSGIDCNKDASYA 291 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA-PEFKLVDSILVT 310 ++ G +T +V +P +G G +V+ G + P A P+F+ D +++ Sbjct: 292 MQEGTLTVSVNPDPVSLGYIGAAFLVNYLNDGDLFPEYVAWPDFQTADDVVID 344 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 133/292 (45%), Gaps = 13/292 (4%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 K L + V L + A +A L T +PF++ + ++ EA+ V +++ Sbjct: 3 RKSLSRILFSGVALAMMAGAASAEGIGASLLTQQHPFYIALADAMKKEAQAENVPLEV-- 60 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 S + D QL ED K I +P+ S + + +A K GI ++ +D + Sbjct: 61 SIANQDLSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPAN--- 117 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 +V +FV TDN A G K A + +G +G VA+I+ S R G + Sbjct: 118 ----NVDVTSFVGTDNFAGGEKAAELMAKTIGEKG-NVAVIDY-PTVQSVVDRIEGFKKG 171 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 K IK+VA QP R +AL A N+LQ NP+I I+ D A+ A AV +A Sbjct: 172 IAKYPDIKIVAIQPG-ITRPEALSAAQNILQANPDIVGIFGFGDDAALAAASAVKSAKLE 230 Query: 242 GKVLVVGTDGIPEARKMVE-AGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 +V V+G DG+ EAR V+ M +AQ P +G ++ K +V Sbjct: 231 NQVKVIGFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAVETAAKVIKGEEV 282 >UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Firmicutes RepID=C8WV69_ALIAD Length = 349 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 11/257 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 Y +V +W G++ AK LGV +F + D ++ + + K+ Sbjct: 56 ETYYMVTFLSGIEYWKGCFAGMQAAAKDLGVKA-VFTGAPQYDINQEVTTMQQVIAKHPA 114 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI +++ + + +A GI +++ D A++ T N+ G K Sbjct: 115 GILVTSINAQAMTPVINQAIAAGIPVISFDSDAPQ-------SKRYAYLGTSNIEAGQKA 167 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKA 203 A ++ LG G EVA+I G + + R G + K +K+VA Q + D+IK Sbjct: 168 ADYLGQALGGHG-EVAVIT-TPGELNLDQRVQGFKDEMAAKYPGVKVVAVQNGNSDQIKT 225 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 V + +LQ PN+ I+C G A AV AGKTG V +V D +++GQ Sbjct: 226 AQVTSALLQTYPNLAGIFCTEADEGTGAATAVQEAGKTGTVKIVSFDTDKATLNAIKSGQ 285 Query: 264 MTATVAQNPADIGATGL 280 +TATVAQ ++G GL Sbjct: 286 ITATVAQGTWNMGFWGL 302 >UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFJ9_STRRD Length = 345 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 13/285 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + V++K + FW M G + G+ V F SE + Q+QL E+ ++ Sbjct: 49 KKIDVIIKASDSSFWQTMIAGAKQSGGDFGLKVSTFGPTSETNIDQQVQLVENSISRGVD 108 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 G+ AP SS L + RA K G+ ++ +D ++ + E F+ TDN+ G + Sbjct: 109 GLVIAPNSSSALNSAIERARKAGLKVITVDSRVTTAS--------EGFIGTDNLKAGMQA 160 Query: 145 ASFIIDKLGAE---GGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDR 200 + + L A+ G V I AG S R +G + Q+K+ + + D Sbjct: 161 GKRMCELLKAQNKTSGSVMIESSVAGIQSLVDRDSGFKQGLANNCPQVKVTLQRYNNNDI 220 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A + L N + ++ N+T +G A+A+ + T V VV D P+ + Sbjct: 221 NTAASQVNDALTANRELAGVFADNNTSGVGAARAIQDNNVTDTVPVVAFDSDPQENAALA 280 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 AG + A V QNP G G+ L +G++ P D P + D Sbjct: 281 AGTIDALVVQNPYFFGYQGV-LAAGMAAAGRIPPRDIDPGAVVAD 324 >UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z738_9FIRM Length = 369 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 26 EYAVVLKTLSNPFWVDMKKGIE---DEAKTLGVSVDIF--ASPSEGDFQSQLQLFEDLSN 80 + + K+ SN FW + K G E K GV V I + E D Q + ++L N Sbjct: 74 KMGAIAKSFSNEFWRNFKNGYEQSEKVLKDAGVDVSIKIDGTTDESDEIGQQTMTDNLVN 133 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + Y + +P+S NL V A K I +N+++ + + + FV D Sbjct: 134 QGYNALMLSPISDSNLTASVDNAKGKKIPTINVNDGLI--------ASADYFVGPDAYQN 185 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWD 199 G A ++ +LG +G +VAI+ G A + R G K S + +VA Q ADWD Sbjct: 186 GELAAEWVSKQLGDKG-DVAIVIGMAKAFAARERTAGFKGWIKDNNSGLNVVAEQNADWD 244 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R KA ++A+ +Q+NP++KAI+C ND MA+GV +AV A K +LVVG DGI EA + Sbjct: 245 RQKAKELASTWIQQNPDLKAIFCNNDDMALGVVEAVEEAKK--DILVVGVDGIGEAYDSI 302 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 AG++ ATV + ++ + +G+ IP L+D V + Sbjct: 303 RAGKLDATVDSFGYYMSQVATEVTLRVL-AGQDIPRVTHTPQALIDKTNVDK 353 >UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A6VWF2_MARMS Length = 322 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 21/318 (6%) Query: 2 NKYLKYFSG-TLVGLMLSTSAFAAAEYAVVLKTLSNPF-----WVDMKKGIEDEAKTLGV 55 NK ++ + T++ + TS A + + + + + + W K + +AK + Sbjct: 5 NKIMRLIAVFTMLFAFVGTSYAAKYKIGISVPSADHGWTAGLLWWANKAAADLKAKEKDI 64 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + AS S Q+ EDL K + P + L + A+ +GIY V +D Sbjct: 65 EFFVVASSSGS---KQVGDVEDLMIKGIDALVILPHNPATLQKVIEEAYDEGIYTVVVDR 121 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 ++ A F+ DN +G GA ++ ++ +G V +IEG + R Sbjct: 122 EL-------AHPAQNVFIAGDNAGLGRVGAQWLAKEMSGKG-NVVVIEGLQ-IPINKQRV 172 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 + + IK++ SQP DW KAL V N LQ++P I A++C +D M GV +A+ Sbjct: 173 DAFNDVIAGYPNIKILDSQPGDWSTQKALSVMENFLQKHPKIDAVWCQDDDMLKGVLKAI 232 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVI 293 +G+T V+G G + +M+++G + ATV +P + A+G+ L V K K+ Sbjct: 233 EESGRTDIKTVLGGAGSKDIIEMIQSGNKMVRATVTYSP-SMIASGIALAVHGVKHEKLG 291 Query: 294 PLDKAPEFKLVDSILVTQ 311 L P ++ + LVT+ Sbjct: 292 YLYHEPSRVILGADLVTK 309 >UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K692_BACHD Length = 332 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 31/310 (10%) Query: 1 MNKYLKY---FSGTLVGLMLSTSAFAA------------------AEYAVVLKTLSNPFW 39 M ++L + F + L S +F + + ++ + +N +W Sbjct: 1 MKRHLFFVVGFMICISALATSIYSFVQVTRVETNVPSSTSISLPSSHFVLIAEEENNSYW 60 Query: 40 VDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMP 99 ++KG + V V+ + +P + + QL+L + + GI ++ Sbjct: 61 RLVEKGAREAENQFDVLVE-YKAPKRSNPEEQLKLIDMAISAKVDGIIVQAVNEEMFTPL 119 Query: 100 VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEV 159 + +A GI ++ +D N A++ TDN G ++D + + V Sbjct: 120 INKAVDAGIPVITIDTDA-------PRSNRVAYIGTDNYYSGTIAGKAMLDDMEGD-IHV 171 Query: 160 AIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKA 219 A+I G ++ + R G + ++ LV + ++ R++A A +++ +P+I A Sbjct: 172 AVITGSLESSHQKLRVQGFIDMISNEPRVTLVEVEASNISRLEAELKAHQLMEEHPHINA 231 Query: 220 IYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATG 279 Y + +G+ A G + V+ D +PE ++E ++ A V Q P ++G Sbjct: 232 FYGTSALDGIGIVAAAEKLGL-DDLYVIAFDTLPENLSLLEQEKIDAIVVQEPFEMGLKS 290 Query: 280 LKLMVDAEKS 289 ++L++D + Sbjct: 291 VELLLDIREG 300 >UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-binding protein n=9 Tax=Actinomycetales RepID=B5GEU2_9ACTO Length = 367 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 10/260 (3%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 +NPF + ++DEA+ GV + A ++ F Q+ +DL K + APL+S Sbjct: 92 ANPFRIAETASLKDEARKRGVKL--LAVNAQSQFSKQISDVQDLIAKGADLLVIAPLNSD 149 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 + A K I +V +D KI+ K + +F+ +D V G + A +I+ G Sbjct: 150 GWEPVLRAASAKKIPIVTIDRKINAGPCK----DYVSFIGSDFVEQGRRAADKMIEATGG 205 Query: 155 EGGEVAIIEGKAGNASGEARRNGATE-AFKKASQIKLVASQPADWDRIKALDVATNVLQR 213 +G EVAI+ G AGN R G + +KA +K+V Q D+ R K V ++Q Sbjct: 206 KG-EVAILLGAAGNNVTTERTKGFKDRVAEKAPGLKVVFEQTGDFAREKGQSVTEQLIQS 264 Query: 214 NPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 P IK IY ND M +G A+ +AGK G V +V DG A K + G ++ + NP Sbjct: 265 KPGIKGIYAENDEMGLGAVNALKSAGKKPGAVKIVTVDGTRNAVKQIVDGWISGVIESNP 324 Query: 273 ADIGATGLKLMVDAEKSGKV 292 G + + K +V Sbjct: 325 -RFGPLAFQTLDTFTKGEEV 343 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 123/308 (39%), Gaps = 14/308 (4%) Query: 1 MNKYLKY---FSGTLVGLMLSTSAFAAAEYAVVLKTLSN--PFWVDMKKGIEDEAKTLGV 55 M K L + + + LS + V N P+ + I++EA Sbjct: 1 MPKLLVFSAYVAIAISAFSLSGCIREKTKKIVGFSQTENIGPWRIAETNSIKEEAAKHKK 60 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + D + ++G Q EDL + I AP L + A I + +D Sbjct: 61 TYDFLITDAQGQTSKQFADIEDLIARQVDVIFLAPREYEGLTPALEAARAAKIPIFLIDR 120 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 + + G + +F+ +D +A G + ++ + + + G AG++ R Sbjct: 121 ----EAAGRPGEHFVSFLGSDFIAQGRRVGEWLAKATDGK-ASIVELTGTAGSSVAIDRA 175 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAMGVAQA 234 G A +K++A+Q AD+ R A+ V N++Q +I A+Y ND MA+G QA Sbjct: 176 KGFRNAIATYPNMKIIATQTADFSRAAAVRVMENIIQAKGSDITAVYAHNDEMALGAIQA 235 Query: 235 VANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + +AG V+V DG A + + G++ +V NP G M + K+ Sbjct: 236 LKSAGMKPGKDVMVGSIDGQKAALEAIIRGELGVSVESNP-RFGPLVFATMEEYFAGKKI 294 Query: 293 IPLDKAPE 300 P + Sbjct: 295 PPRIILKD 302 >UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacteria RepID=B2T1S7_BURPP Length = 339 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 22/326 (6%) Query: 2 NKYLKYFSGTLVGLMLS---TSAFAAA-----------EYAVVLKTLSNPFWVDMKKGIE 47 + ++ +G+L+ L + +A A + +NP+ + K + Sbjct: 14 KQQIRPLAGSLLALAIGFGVATAHADDALPKLASKTPLKVGFAQTESNNPWRLAETKSFK 73 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 D A G + + + Q+ +++ ++ + F P L V +A K G Sbjct: 74 DIAAKCGWQL--VMTDANSSNSKQVSDIQNMIAQHVDLLVFPPREEKPLAPVVLQAKKAG 131 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I ++ +D +D ++ KAG + F+ +D + G + A +++ G + ++ +EG G Sbjct: 132 IPVILVDRDVDQ-SVAKAGRDYITFIGSDFIDQGHRAADWLVKATGGK-AKIIELEGTTG 189 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 ++ R+ G E K + ++ASQ D+ R K V +LQ +P++ A+Y ND M Sbjct: 190 ASAANDRKKGFDEIIAKNPGMTIIASQSGDFARDKGRQVMETLLQAHPDVTAVYAHNDEM 249 Query: 228 AMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 A+G A+ AGK + +V DG + AG++ A+V +P G + Sbjct: 250 ALGAIAAIKAAGKQPGKDIQIVTIDGTKGGMDAIAAGELGASVQSSPF-FGPLACDVAQR 308 Query: 286 AEKSGKVIPLDKAPEFKLVDSILVTQ 311 K K IP K D V Q Sbjct: 309 YAKGEK-IPTWVKVSDKFYDKSNVQQ 333 >UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Actinomycetaceae RepID=C2KRR4_9ACTO Length = 326 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 10/268 (3%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + + +V K + FW +KKG ++ K LG V+ +E QL ++ N Sbjct: 39 SKKIILVSKGFQHTFWQSVKKGALEKGKELGYEVEFIGPKNETAVTEQLDQLKNALNAKP 98 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I A L S + + GI ++ D +D D V TDN GAK Sbjct: 99 AAIGLAALDSKAAEPILQQIKNAGIPVIAFDSGVDSDIPLTT-------VQTDNRTAGAK 151 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDRIK 202 A + +G +G V I+ +G+ R G + K+ IKL+ Q AD +R K Sbjct: 152 AAEKLAQLMGNKG-TVGIVCHGQATTTGKGRCFGFQDWMKEHAPDIKLLQEQWAD-ERGK 209 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A D A +++ N ++ A+Y +N+ A GV Q V AGK G++ +VG D +++G Sbjct: 210 AADAAKAIVKSNTDVTAMYGSNEVTAAGVLQGVKEAGKMGQITIVGFDSGKAQIDAIKSG 269 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSG 290 + Q P +GA + A K Sbjct: 270 DEAGAITQAPVKMGAETVAAADKAIKGE 297 >UniRef50_UPI000185D1D6 putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D1D6 Length = 903 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 122/310 (39%), Gaps = 20/310 (6%) Query: 4 YLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 ++ + L + V + + + M + ++ E ++ Sbjct: 7 HILFLYFALFACLACQRERNPRYVIGVSQCSEDLWRQTMNEELKREVALYQADAEVLIRS 66 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 + D Q+ E + + +P S + +A+++GI ++ +D KI ++ Sbjct: 67 VKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATES-- 124 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 A+V +N +G + + I L +G +A + G G+ S R G +A K Sbjct: 125 -----YTAYVGANNYQIGKEAGLYAIGVLKGKG-NIAEVRGTKGSTSDAERHKGFVDALK 178 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 A ++++VA ++ + A + Q +P+I ++ ND MA G +A GK Sbjct: 179 NAPEVQIVAETWGNFLQADAKTQMQQIFQEHPHIDLVFAMNDPMAAGTHEAAMQFN--GK 236 Query: 244 V-LVVGTDGIPE-ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 + ++G D + + + +E A+ G ++L + K++ Sbjct: 237 IPFIIGVDALQQVGIQNIENSVQDASFIYPTG--GEKVIELAM------KILHKQPFQRE 288 Query: 302 KLVDSILVTQ 311 ++++ +V + Sbjct: 289 NILNTTVVDK 298 >UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderiales RepID=Q221W3_RHOFD Length = 331 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 133/320 (41%), Gaps = 21/320 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSA--------FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 M K F L+ + L+ + AV+ K ++ PF+ D G + A Sbjct: 17 MKKLPPLFQFALLAIPLTLAVQMNATAKDVKDLRIAVIPK-VAVPFFDDCNNGAKAAADK 75 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 LGV + P +Q+++ EDL +K GIA + ++ + +A GI +V Sbjct: 76 LGVQYQ-WVVPQNTQGSTQVRILEDLISKKVDGIAISVNEPKSVEAAIKKAVASGIKVVT 134 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 D A ++ T N A G + + EG EVAI+ G+ G A+ Sbjct: 135 FDSD-------SANSGRSMYIGTINSAAGETMGESMAKAIDGEG-EVAILTGQLGAANLN 186 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV- 231 R G ++ K +IK+VA++ + D KA+ ++ + +P +K I+ + V Sbjct: 187 ERITGIKKSLSKYPKIKVVATEGTEDDLAKAVSTTESLFRGHPALKGIFGVSQVGGPAVS 246 Query: 232 -AQAVANAG-KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 A G K G V V D +P+ K V+ G + + Q P +G ++ +VD Sbjct: 247 KVMATKEFGSKKGAVKVFAFDDLPDTVKGVKEGYIQGIMVQRPVTMGKLAVEHLVDQITG 306 Query: 290 GKVIPLDKAPEFKLVDSILV 309 + P D +V S + Sbjct: 307 KEPAPKDVDTGVNVVTSQNL 326 >UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I6_RUMGN Length = 337 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 11/266 (4%) Query: 26 EYAVVLKTL--SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + +V KT+ SN FW + +G + A+ G +++ S SE D++ Q +L E+ KN Sbjct: 46 KIIMVPKTIDESNDFWTGLIEGAKLGAEEFGCEIEVVGSDSEDDYEGQNRLIEESIKKNP 105 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 AP S + V A GI ++ +D ID + V TDN G + Sbjct: 106 DAFLIAPCSYTHTTEAVQEAINAGIKVILVDSVIDKEIANGV-------VATDNFKAGKE 158 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 +F + ++ ++ G+++ R +G E + ++ + A Sbjct: 159 LGTF-AKTILKPDSKIGVVAHVKGSSTATEREDGIREGLGEDQN-RIQDIVYCNSSYDLA 216 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D+ +L+ P I + N+ A+G A+ V G +V VVG D E +++EAG Sbjct: 217 SDLTEKMLKERPEIDVVIGTNEYSAVGAARGVKKMGMEDQVKVVGFDNSVEQIQLLEAGV 276 Query: 264 MTATVAQNPADIGATGLKLMVDAEKS 289 V Q P +IG G++ V A + Sbjct: 277 FQGIVIQKPFNIGYLGVEQAVKAIEG 302 >UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI72_RHISN Length = 367 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 11/283 (3%) Query: 31 LKTLSNPFWVDMKKGIEDEAKTLG----VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 L T + ++ + G+++E G + + + A S+ Q++ E N I Sbjct: 76 LPTAMDTYYQRVLAGVKEEIDKRGGAEAIELLVQAPSSQSATDDQIRAMEAWINDGIDAI 135 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 A A + L+ + RA + GI + + + V D G A Sbjct: 136 AVALYNEGALLPSIRRATEAGIPVFLFNSPF------ADNPYYVSDVGYDQSDGGRAQAQ 189 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +I+D G + ++ I+EG G R G E K K+VA QPA W R + L V Sbjct: 190 WIVDTYGDKEVKIGILEGLPG-PHTSQRMKGFNEIISKHPNFKIVAQQPAGWVRAQGLSV 248 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N+ NP+I+ + D MA+G QA+ G GKV +VG + + EA + G +A Sbjct: 249 TENMFTANPDIEVLVALYDEMALGGLQALKAKGLNGKVAIVGYENMKEANAAILTGDFSA 308 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 TV + G ++ + + G +P K+ D+ + Sbjct: 309 TVDTGAKEEGRNIVRAVDEFLMKGNPLPKKIFVSPKVYDATNI 351 >UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J068_9BACL Length = 330 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 15/305 (4%) Query: 9 SGTLVGLMLSTSAFAAAEYAVVLKTLS--NPFWVDMKKGIEDEAKTLGVSVDIFASPSEG 66 G++V + A Y +VL +P+W ++KG + A+ G+ ++ F P Sbjct: 35 IGSIVKELQGQPASGEPRYHIVLIEQERYHPYWEMVEKGAAEAAEKYGIDIE-FTGPVRN 93 Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 + + QL L E I L+ + +A ++GI +V +D Sbjct: 94 NMEEQLNLLEKAIAARVDAIIVQGLNEERFTPVIDKAVRRGIPVVTIDTDA-------PN 146 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS 186 +V TDN+A G + +++ G G II A+ R +G + + Sbjct: 147 SQRLTYVGTDNLAAGERLGRLVVETTGGIGKIGVIIGSDQ-AANQLQRLDGLKKIVAEHE 205 Query: 187 QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLV 246 +++V + ++ ++A+ A N+L+ +P I + + T A+GV QA N + + Sbjct: 206 GLEIVDVRSSNISHMEAIQQAANMLRNHPEITIMVGTSATDALGVLQAAKNR---DDLTI 262 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 +G D E + + G++ ATVAQ P +G T ++L+ + G+ + E K++++ Sbjct: 263 IGFDNQKETLEAIRKGEIEATVAQQPFLMGETAVRLLYEHF-GGQALKKAYFTEVKVLNA 321 Query: 307 ILVTQ 311 V + Sbjct: 322 HNVEE 326 >UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QS72_MYCS2 Length = 348 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 9/290 (3%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A A + + + F++ M+ G ++EA LGV+V+ P + D Q + + + Sbjct: 56 ASKNYNIAFLQGVVGDQFYITMQCGAQEEAANLGVTVNTQ-GPQKFDPTLQKPILDSIVA 114 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + AP + MP+ +A GI +V +D + + + + +DN Sbjct: 115 SKPDALLVAPTDVQAMQMPLEQAAAAGIKVVLVDTTTNDPSY------AVSAIASDNEGG 168 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G A I +L EGG+V ++ G ++ +AR G EA + V Q + D Sbjct: 169 GR-AAFEAIKQLHPEGGKVMVMGLDPGISTTDARTKGFEEAVAEDPGFTYVGVQYSHNDP 227 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A + LQR+P++ ++ AN A G A + AGK+ +V VVG D P + + Sbjct: 228 ATAAQLIGAQLQRDPDLVGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDAGPNQIQALR 287 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 G + A VAQ+P IG G+ V A + G+ P + F ++ + Sbjct: 288 EGTVQALVAQDPGTIGKFGVDEAVTALEGGENSP-NVQTGFTIITRENLD 336 >UniRef50_A1WGA7 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderiales RepID=A1WGA7_VEREI Length = 361 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 7/310 (2%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 F+ G+ + A ++L+NP+ KG + AK++G+ + E Sbjct: 26 TAFAVAGSGMPGLSFGTGPTTLACSFRSLTNPYHAAFNKGAQSFAKSVGLPYVPLTT--E 83 Query: 66 GDFQSQLQLFEDLSNK--NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 G + + L K + P S + + V K G ++ + K + + Sbjct: 84 GSSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIVETCAKAGAHVTTIWNKPNDFHPW 143 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 + A ++ D +A GA A+ + +G +GG VA + G N R+ G A K Sbjct: 144 DFNPHYVAHLSFDGLAYGAATATELFKAMGGQGGVVA-LGGIFSNVPAIERKAGLMAALK 202 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGKTG 242 K I+L+ Q ADWD KA + L R N +K ++ AND MA+G +A+ G G Sbjct: 203 KFPDIQLLDFQVADWDSQKAFPIMQAWLTRFNTKVKGVWAANDDMALGAIEALRAEGLAG 262 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG-KVIPLDKAPEF 301 ++LV G DG ++AG++ ATV +P +G GL + + A++ V L K Sbjct: 263 QLLVSGMDGTQPGLAALKAGELVATVDWDPYWLGGVGLSMGLSAQQKKMDVARLPKERRE 322 Query: 302 KLVDSILVTQ 311 + LV++ Sbjct: 323 SFCKATLVSK 332 >UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacteria RepID=A1WLB7_VEREI Length = 328 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 88/298 (29%), Positives = 139/298 (46%), Gaps = 16/298 (5%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 + + A + TL +PF+V +K+G E AK G + + GD Q Sbjct: 25 LTPVAHAAGLKIGFSQVTLQSPFYVQLKEGAEAAAKAGGDELIFL--DANGDVNKQNNDI 82 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 +DL + + P++ + +A A K G+ ++ +D I+ GG V A + Sbjct: 83 QDLLTRKVDVLIINPVNPDAVKPAIAAAQKNGVPVITVDRSIN-------GGGVTAHLGR 135 Query: 136 DNVAVGAKGASFIIDKLGAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 DNV +G ++ +L +G G+V I+G AG ARR+G +A K S K+VA Sbjct: 136 DNVKMGKAVGDAVLAELKKKGTTRGKVIEIQGDAGGTVMAARRDGFHDALK-GSGFKIVA 194 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 A++ R A+ ++LQ +P++K +Y ND MAMG + +A AGK V V G DG+ Sbjct: 195 GPYAEYTRANAVTAMQDLLQAHPDVKVVYAHNDDMAMGALKVLAEAGKK-DVFVAGVDGL 253 Query: 253 PEARKMVEAGQMT-ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 EA + G AT +P +G ++ A K+GK +P K V V Sbjct: 254 SEALASMAGGDQYVATALNDPRYLGDMTVQTA-RAIKAGKKVPAFVDAGTKAVTKANV 310 >UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z758_9NEIS Length = 313 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 128/314 (40%), Gaps = 21/314 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE-YAVVLKTLSNPFWVDMKKGIEDEAKTLG-VSVDIF 60 +Y + L GL + A + V + L+NPF+V + KG ED AK +G V + Sbjct: 4 RYTVLTAAVLAGLAAPSFAARPLKSVGVAVGDLANPFFVAIGKGAEDAAKKIGGPGVKVT 63 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +Q+ E+ I + + + +A GI + Sbjct: 64 TVSSKYDLNTQVGQIENFIANKVDVILVNASDPMGIEPVLKKARAAGI---------AVV 114 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + +A V +DN GA+ F+ +LG G V I+ G A AR G + Sbjct: 115 AVDVGAVGADATVMSDNAMAGAESCKFMAQQLGGRG-NVVIVNGPPVTAVS-ARVAGCKK 172 Query: 181 AFKKASQIKLV-ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 IKL+ +Q A R ++ N+L + I A++ ND +G AV AG Sbjct: 173 VLGNYPGIKLLSDNQDAHGSRDGGMETMANLLTAHKKIDAVFAINDPTGIGAELAVKQAG 232 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 ++ L+ DG P+A K ++ + + AQNP + +++ D + Sbjct: 233 RSDVKLIAAVDGAPDAEKALKDKKSLFAVSAAQNPYTMATMAVQIGYDILNGKR-----P 287 Query: 298 APEFKLVDSILVTQ 311 A L+ + VT+ Sbjct: 288 AKSQVLLPTPAVTK 301 >UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Proteobacteria RepID=MOCB_RHIME Length = 309 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 123/307 (40%), Gaps = 9/307 (2%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 K+ G +++ST+A A + + F ++ G+ED AKTL VD+ + Sbjct: 2 KKFIIGIAAAVLVSTAAHAE-TIGASMAVFDDKFGTLLRNGMEDYAKTLD-GVDLQIEDA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 D Q ++ I P+ + + A GI LV ++ + + Sbjct: 60 LNDVAKQQSQIQNFIAAGVDAIIVQPVDTDATTVMSKLAADAGIPLVYVNREPVNIDTLP 119 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK- 183 +AFV ++ V G I L +G V I+ G+ N + R + Sbjct: 120 ---EKQAFVASNEVDSGTLQTREICKLLDGKGKAVVIM-GELSNQAARMRTKDIHDVLAT 175 Query: 184 -KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT- 241 + I++V Q A+W R + D+ TN L A+ ND MA+G QA+ AG++ Sbjct: 176 DQCKGIEIVQEQTANWQRTQGADLMTNWLSAGIEFDAVIANNDEMAIGAIQALKAAGRSM 235 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 V++ G D +A + AG++ +V Q+ G + + K V P Sbjct: 236 DSVVIGGIDATDDALAAMAAGELDVSVFQDAVGQGKGSIDAALKLSKGEAVERKIYIPFE 295 Query: 302 KLVDSIL 308 + + L Sbjct: 296 LVTKANL 302 >UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R356_ARTAT Length = 314 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 16/296 (5%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 + V + + F+V G++ A G + + + G+ Q+ Sbjct: 19 AANAGGTGKKTIGVSMPEFHSLFYVAAVDGMKKAAADEGYELVVL--NANGNSSQQVNQV 76 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 ++L + + FA + VA A I ++ +D ++ G+V F+ + Sbjct: 77 QNLVTQQVGAVIFAMQDATAGAAGVAEAKGANIPVIAID--------QRPQGDVTTFIGS 128 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 D+V + ++ ++G +G +AII+G G+++ R G +K IK+V++ Sbjct: 129 DSVKASTELCDYLAKQMGGKG-NLAIIKGVLGSSTEIERSKGCGSILEKNPDIKVVSTTN 187 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 ADWD KA +VA +VL NP ++AI+ ND MA+G A+A A AG++ + +V DG P+ Sbjct: 188 ADWDENKAYNVAQDVLTANPELQAIFAQNDGMALGAAKAAAQAGRSN-LKIVSVDGFPQV 246 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +E+GQ+ AT++Q P +G ++ + A + +L ++LVT+ Sbjct: 247 YDAIESGQVLATMSQEPYQMGELAVRTAIKAMSGE----AGSIQKEQLQPTVLVTK 298 >UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K631_BACHD Length = 327 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 10/278 (3%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 ++ F + G++ +V++ +E D Q+ EDL + I Sbjct: 48 IGFAHPDFNDMFLGFLLAGVQAYEAEQ-TNVEVVYVDAENDSDGQIAQVEDLIAQGVDAI 106 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+ + V RA + G+ +V ++ + +A+V +D++ G Sbjct: 107 MAIPVDLIATEFIVDRAQQAGVPVVLINR--------DSVEREDAYVGSDSLQAGTIQME 158 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 + L +G ++AI+ G+ G+ + R G + + +++V W R K ++ Sbjct: 159 EVAAVLKGKG-KIAIMNGQMGHTAQINRTLGNKQVVDQYPGMEVVIEGTGGWSREKGKEL 217 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 + ++ A+ ND MA+G A AG +++ G DG P+A + G++T Sbjct: 218 MESWIESGQTFDAVVANNDEMAIGAIMAAEEAGIVDELVFAGIDGTPDALDYMSKGKLTI 277 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 +V Q+ G TGL+ + K + P + Sbjct: 278 SVFQDAKGQGQTGLEQAIKLAKGESAEKMTNIPYETIT 315 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 18/278 (6%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 V TL + F++D+ +GI+++AK LGV V + + + D Q ED +N G Sbjct: 43 TIGVSTITLQHQFFIDIDEGIKEKAKELGVKVIV--NDPDQDVAKQTSAIEDFIQQNVDG 100 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + + +V V A++K + +V +D ++ +N + ++V T + G K Sbjct: 101 MIVLGTDNSAIVPAVEGAFEK-MPVVTVDAVLNTEN-------ITSYVGTVSYDAGKKLG 152 Query: 146 SF----IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 + I +KLG + E+AI+ + R +G +A K ++ +K++ SQP +DR Sbjct: 153 EYTKKYIDEKLGGKS-EIAIVTDLKSQIQMQ-RIDGFKDALKGSANVKILNSQPG-YDRE 209 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 ++L+ N++Q NP++ IY + +G A+ +A K V +VG D EA + Sbjct: 210 ESLNTVENLIQSNPDVDIIYATAENSVLGAKAALESA-KNKDVKIVGFDLTEEASSGITD 268 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 G + A + Q P ++G ++ +V A K KV P Sbjct: 269 GTILAMIQQQPKEMGRLAVEAVVKAIKGEKVEKNIPVP 306 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 14/274 (5%) Query: 18 STSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 A A + VVL ++N F+VDM +G A+ G V ++ D +Q+ L Sbjct: 51 GQPAGGADKIVCGVVLIDMTNQFFVDMIEGGNKAAEDYGCEVIWKSADGNFD--NQISLI 108 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ + I PL S L + +A GI + + ++D++ + T Sbjct: 109 ENFIEQGVDCILVDPLDSEGLKPVIEKASAAGIPTITMAGQVDVE---------TNYTTV 159 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 N + + + K+ E G+ A++ G GN + R+ G +K I +V QP Sbjct: 160 YNDEENTRIIAEMTAKMIGEEGKTALLYGNKGNLVSDLRQKGYYAGMEKYPNITVV-EQP 218 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 +WD + A +++ NP++KAI+C +D + + QAV AGK G+++V DG +A Sbjct: 219 TNWDPPTGMKAAQDLIAANPDLKAIHCISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDA 278 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 K VE+GQ T+TV G +++ + Sbjct: 279 LKAVESGQFTSTVLTGAKKTGYWNIQVALQLASG 312 >UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F3L8_THELT Length = 321 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 19/316 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG--VSVD 58 M K+L + LS F A E A V+K + FW G ++ L V V Sbjct: 1 MRKFLLVLAMVF---TLSALVFGAYEIAFVVKATDSDFWQYTIVGAKNAEHDLQGLVKVT 57 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 ++ PSE D Q+ + ED+ I + SS + +A+++GI ++ +D + Sbjct: 58 VYGPPSEADIDKQVAILEDVIRTKPDAIVISSTSSHATAPALNKAYQQGIKIILIDNFV- 116 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG----GEVAIIEGKAGNASGEAR 174 +F+ T+N G A +++ L G G+V +I AG R Sbjct: 117 ------YDTGYHSFLATNNKVGGGLAAEKVVELLKKSGRPLKGKVGLISSMAGVQVLIDR 170 Query: 175 RNGATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVA 232 +G T K+ A ++++ ++ D D KA A +++ + + AI+ N+ GVA Sbjct: 171 DDGFTARLKELAPDLEILPTRYVDNDIAKAAAAAEDLITAYGDQLVAIFADNNHTGDGVA 230 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + + KV+ V D P+ + + G + A + Q+P +G G+ A +G+ Sbjct: 231 RVIEEQNLQDKVIAVAYDSDPQEVEALRNGSLKALIVQDPHGMGYKGVMFAFMAI-NGET 289 Query: 293 IPLDKAPEFKLVDSIL 308 +P +V Sbjct: 290 LPSYFDTGVYVVTKEN 305 >UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Selenomonas RepID=C9LWW5_9FIRM Length = 347 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 13/278 (4%) Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 + F + +K ++AK+ G+ V+ ++GD Q+ + + I + Sbjct: 79 DDAFAMQLKNTFAEKAKSAGLDVEFL--DAKGDSNLQIDQLNEAISNKAAAIVLLAMDGT 136 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 ++V V +A + GI +V ++ ++ + + +D+ G F+ L Sbjct: 137 SIVPTVEKAREAGIPVVIMNRDVNDPKVIGSL--------SDDREAGRMQGEFMASHL-P 187 Query: 155 EGGEVAIIEGKAGNASGEARRNGATEA-FKKASQIKLVASQPADWDRIKALDVATNVLQR 213 +V + G++ + R G EA K +KL+AS W + + + T L Sbjct: 188 PNAKVVYLMGESSLSVAVKRWEGFKEACLDKRPDVKLLASVDGSWSKAEGMKAMTLWLSF 247 Query: 214 NPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPA 273 P I + AND MA+G QA+ A + LV G D P VEAG+++ TV Q+ Sbjct: 248 FPEINGVVAANDEMALGAIQALKAANRLNGCLVTGVDATPAGLAAVEAGELSQTVKQDAE 307 Query: 274 DIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A + +V SGK F + V Q Sbjct: 308 GQAAGAV-TLVQGFLSGKAPTESLDIPFTSITRENVAQ 344 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 10/243 (4%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 + SNPF I ++AK+LGV + + D +Q ED+ + K + AP + Sbjct: 91 STSNPFRSTETDSITNQAKSLGVKL--IQRNANADVNAQNSQIEDMIAQGAKVLIVAPEN 148 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL 152 S L +A A K I ++ +D + A + AF+ ++ A + Sbjct: 149 SDGLGPALAEAKAKKIPVLTIDRTV----TGTACSDFIAFIGSNFYGQAQIAADDLATAT 204 Query: 153 GAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDVATNVL 211 G++ +VAI+ G GN R NG + K K + +VASQ +D+ V +L Sbjct: 205 GSQ-AKVAILSGTPGNNVTTDRTNGFQDQVKAKYPNMTVVASQTGKFDQTDGQSVMAQML 263 Query: 212 QRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVA 269 Q NP I A+Y ND MA+G QA+ AGK + +V DG +A + V AG + A V Sbjct: 264 QANPGITAVYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAGTIYADVE 323 Query: 270 QNP 272 NP Sbjct: 324 TNP 326 >UniRef50_Q1AUT8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinobacteria (class) RepID=Q1AUT8_RUBXD Length = 351 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 69/286 (24%), Positives = 123/286 (43%), Gaps = 10/286 (3%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK-NYKG 85 V S F +++G+E + LGV ++ P+ G Q Q+ + L ++ G Sbjct: 70 IRVSYHNTSLGFANPIREGVEKAKRELGVDAELI-GPANGSAQEQVSELQTLISQQKVDG 128 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 +A + S+ L +A+A+ GI +++ + G AFV D V G A Sbjct: 129 LAVSSASNDALKPVIAQAYNAGIPIISFNT-------NNPGSKQMAFVGQDLVQSGRFEA 181 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + +LG G+V + G R +G + A I++ + + +A + Sbjct: 182 EQLRKELGDRKGKVVVFSVDTGAGWSNDRFSGFEAGMEGAEGIQIEGPINSGNEPRQAFN 241 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 N + NP+ AI + A+ V GK G+++VVG D +P+ + G + Sbjct: 242 AVQNTMTANPDAIAIASLDCCSVDAAAKWVQQNGKKGEIIVVGFDVLPQTADFIRNGVIQ 301 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 T++QNP + G +K++ D K K + D KLVD + + Sbjct: 302 FTISQNPVEQGYQSVKILNDFLKKNKPL-RDVNTGTKLVDKSNIDE 346 >UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB2_9BACT Length = 327 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 18/295 (6%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 + A + +AV +TL+NPF+VD+ G++ G + ++ Q D Sbjct: 42 TAGAAGSRFFAVSFQTLNNPFFVDLNDGLKQVIDEHGDRLVTL--DAQFSSLKQKNDLSD 99 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 + + I P++ ++ + A I ++ +D + +L V A V +DN Sbjct: 100 VIEQKPAAIFLNPVNWESVRATLIAARNAKIPVIVVDAPVPDADL------VLAQVASDN 153 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPA 196 VA G A + D +VAI++ N + R G T+ K ++A Q Sbjct: 154 VAAGRLAAQALGDA--RPQAKVAILQYSV-NKACVDRVAGFTDVLAKSFPGATIIARQDV 210 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 V ++L R P++ A++ ND A+G A+ AG++GKVLVV DG EA Sbjct: 211 KGTSEATRPVMRDLLGRFPDLDAVFPINDPGAIGCVSAIDAAGRSGKVLVVTVDGSREAA 270 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + + G + +T AQ P IG+ D P+DK + V LVT+ Sbjct: 271 QFILNGGIHSTSAQFPKKIGSLAAGAAYDHLAGK---PVDKEIK---VPVTLVTK 319 >UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M5H3_CAPOD Length = 934 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 119/311 (38%), Gaps = 16/311 (5%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFW-VDMKKGIEDEAKTLGVSVDIF 60 KY F + L+ Y + + S W M + ++ E + ++ Sbjct: 13 RKYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWRQTMNEELKREVALYQANTELL 72 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + D Q+ E + + +P S + +A+++GI ++ +D KI + Sbjct: 73 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 132 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + A+V +N +G + + I L +G +A + G G+ S R G + Sbjct: 133 S-------YTAYVGANNYQIGKEAGHYAIGILKGKG-NIAEVRGTKGSTSDAERHKGFVD 184 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A A ++++VA ++ + A + Q++PNI ++ ND MA G +A Sbjct: 185 ALNNAPEVRIVAETWGNFLKADAKVQMQQLFQQHPNIDLVFAMNDPMAAGTHEAAMQFN- 243 Query: 241 TGKV-LVVGTDGI-PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 GK+ ++G D + E +E A+ G + L + + + Sbjct: 244 -GKIPFIIGVDALQQEGISNIENNVQDASFIYPTG--GEKVIDLAMK-ILHKQPFERENI 299 Query: 299 PEFKLVDSILV 309 +VD V Sbjct: 300 LNTAVVDKSNV 310 >UniRef50_A6DJR9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJR9_9BACT Length = 326 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 28/313 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFA------------AAEYAVVLKTLSNPFWVDMKKGIED 48 M K L + S+ + + + TL+NPF+V++ + + Sbjct: 1 MKKLLNALMLLACLGLFSSCGESDSASSNEPLQKNKKLLGITVMTLANPFFVELAEAAKA 60 Query: 49 EAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGI 108 EA+ G V I + D + Q + +D ++ I AP +++ + P+ A I Sbjct: 61 EAEKHGYEVIILSGD---DAEKQAKQMKDFISQKVDAIIVAPKNTLAIGEPIKAANAAEI 117 Query: 109 YLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGN 168 + D G V V TDN G A +ID L GG+V I++ K Sbjct: 118 PVFTADTG-----CTDPGAKVVCNVMTDNFGGGKLAAQAMIDVL-PNGGKVLILDFKKAQ 171 Query: 169 ASGEARRNGATEAFKKA------SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYC 222 S R +G E + +I +VA + + L P++K ++ Sbjct: 172 -SCLLRVDGFKEVIAEHNEAHPDKKIVIVAELDGAAAEEPSKKATEDQLNATPDLKGVFA 230 Query: 223 ANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL 282 ND A+G A+ A K V ++G DG+ ++ + G++ A Q P++IG ++ Sbjct: 231 INDLSALGAVVALKKANKLQDVKIIGFDGLRIGKEAILRGEIHADPIQFPSEIGKLTVQQ 290 Query: 283 MVDAEKSGKVIPL 295 ++ + +V P Sbjct: 291 ILAYKNGDEVKPE 303 >UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Proteobacteria RepID=A5FXE6_ACICJ Length = 328 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 14/294 (4%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 S A+ + +LSNPF+V +K +EA LG + + G+ +QL L + Sbjct: 34 SQKGSNGKTIAIFVPSLSNPFFVAEEKFAAEEATKLGYGTMV--ASHNGNAYTQLNLIKT 91 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 ++ I + + + V A K G+ + +D +I+ A G +A + ++N Sbjct: 92 AIARHVAAIILDNAGADSSISAVKLATKAGVPVFLIDREIN------AKGIAKAQIVSNN 145 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 + +G +G + G + + + R G K S +K+VA Q AD Sbjct: 146 FQGAQLEGTEFAKLMGYKG-TYVELTGLPSDTNAKVRSQGVASVLKHFSGMKMVAVQTAD 204 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W + K V +L+ +P+IK + NDTMAMG A+ A K V+V G DG P+ Sbjct: 205 WSQSKGFQVTQTLLEAHPHIKGLIADNDTMAMGAEAALLAAHKPN-VIVTGFDGSPDVIN 263 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + GQ+ A V Q A + ++GK PE + ++ L+T+ Sbjct: 264 SIRKGQIKADVLQPIATFSREAVIEADKYIRTGKT----GKPEKQELNCTLITK 313 >UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Proteobacteria RepID=A1WJM2_VEREI Length = 330 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 19/298 (6%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + V +KTLS P++ + + K LG V A+ ++G Q Q+ EDL Sbjct: 32 QTGAFKIGVSMKTLSAPYFAAQMEAAKARGKELGYEV--LATDAQGKLQKQISDVEDLVT 89 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + K + P S LV V A G+ +V +D ++ N V + N Sbjct: 90 RGVKLLIINPADSEGLVNAVNNASANGVKVVVIDSTLN------PRANFVTQVQSSNSIN 143 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-------SQIKLVAS 193 GA ++I+++G + ++A++ G+ GN G+ RR G +A + + +V Sbjct: 144 GALVGHWVIEEVGNKSLKIALLSGEKGNPVGQERRLGVLSGIIEAQLRKFGKADLTVVGQ 203 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 W+ L ++L N +I + ND+M +G +A+ +AG+TG +LV D Sbjct: 204 GWGHWNDEGGLKAMEDLLVANKDINMVLGENDSMVLGARRAIESAGRTGILLVAAADAQK 263 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 EA +++ G+ T +PA + T + L V K + P+ L +T+ Sbjct: 264 EALALIKQGKYGVTGLNDPALVARTAIDLGVKVVKGE----VKDVPKQTLTTPAAITK 317 >UniRef50_A1TUU8 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TUU8_ACIAC Length = 318 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 152/305 (49%), Gaps = 9/305 (2%) Query: 11 TLVGLMLSTSAFAA--AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS--PSEG 66 L G + + AFA + A+V+K+L+N F+ M+ G + K + A+ +E Sbjct: 15 ALAGGLFAQPAFAQDKPKVALVMKSLANEFFRTMEDGAKAHQKAHASEYTLVANGIKNET 74 Query: 67 DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAG 126 D +Q+++ E + I AP S LV V A KGI +VN+D ++D + LK+ Sbjct: 75 DTAAQIKMIEQAVAQKVNAIVLAPADSKALVPAVKAAVDKGILVVNIDNRLDANALKEKS 134 Query: 127 GNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS 186 NV FV DN A ++ +L A G +V IIEG + + + R G +A K A Sbjct: 135 LNV-PFVGPDNRAGAKLVGDYLAKQLKA-GDKVGIIEGVSTTFNAQQRTLGFQDAMKAA- 191 Query: 187 QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLV 246 I +V Q W+ K VA +L+ +P++ A+ ND+MA+G AV AGK GKV V Sbjct: 192 NINVVGVQSGQWEIEKGNTVAAGMLREHPDLVALLAGNDSMALGAVAAVRAAGKAGKVQV 251 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 VG D I + M+ G++ AT Q A G+++ + A + P + P + Sbjct: 252 VGYDNINAIKPMLADGRVLATADQYAAKQAVFGIEMALKALAAKT--PQAQLPAEVKTEV 309 Query: 307 ILVTQ 311 +LVT+ Sbjct: 310 VLVTK 314 >UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZZ1_MARMS Length = 294 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 19/294 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVV---LKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 K LK F+ V L ++ A + VV L T S+PF++ + G+++ AK +++ + Sbjct: 2 KNLKRFTAIAVALASASFNLYAKDEPVVCASLLTQSHPFYIALGNGLKEGAKLQHINLKV 61 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 S + D Q+ ED KN I +P+ S + P+ +A + I ++ +D + Sbjct: 62 --SVANQDLAKQINDIEDCITKNVDAIVISPVDSKGIRGPLKKAERANIPVITVDIGAE- 118 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + + + TDN G + +LG +G +V ++ G +S EAR G Sbjct: 119 ------NSKIVSHIATDNYGGGVVAGKLAVKQLGGKG-QVVMLSY-PGISSVEARLQGFR 170 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 +A + IK+VA QP R +++ N+LQ NP+ I+ D M +G AV Sbjct: 171 DAVAD-TDIKIVAVQPGK-TREESMTSTINMLQANPDTDLIFAFGDDMMIGAGLAVTKQ- 227 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSGKV 292 K +V+G DG+PE K V+ + V Q+ +G T +K++ D +V Sbjct: 228 -KSKAVVIGFDGMPEGIKAVDENDHIIGVVKQDADAMGKTAMKVVADYLNGKEV 280 >UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribose) n=2 Tax=Agrobacterium RepID=B9K0T2_AGRVS Length = 329 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 14/321 (4%) Query: 1 MNKYLKYFSGTLVGL-----MLSTSAFAAAE---YAVVLKTLSNPFWVDMKKGIEDEAKT 52 M + S T + L + T A A + A++ ++ F++ M KG E A Sbjct: 1 MERRRFLQSATALALSAPAVLAVTRAQAENKKFRIALIPGLTTDAFYITMHKGAEAAAAA 60 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 +G + +P + + +Q+ + + + K I AP + LV P+ +A GI ++ Sbjct: 61 IGAQIIFQGAP-DFNPVTQVPVLDAVIAKKPDAILIAPTDTTQLVQPLKKAADAGIPMIT 119 Query: 113 LDEKIDMDNLKKAGGNVE---AFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNA 169 +D I + + G+ + +++ +DNV G A + +G +G +V + K G + Sbjct: 120 VDTFIGTGDYQTGAGDGDFPLSYIASDNVLGGEIAARSLALAIGDKG-KVYVSNVKPGVS 178 Query: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 + + R G K I ++ +Q D D KA V RNP++ ++ AN + Sbjct: 179 TTDQREQGFKSEMAKHPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANLFSGL 238 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G A V AG++G + VV D +++G + +AQ+PA+IG G+ A + Sbjct: 239 GSANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLIDFAIAQHPAEIGYYGVISAY-AHLT 297 Query: 290 GKVIPLDKAPEFKLVDSILVT 310 G+ IP F +++ VT Sbjct: 298 GQSIPTKIGTGFTVINKSNVT 318 >UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55A58 Length = 331 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 7/273 (2%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 + ++ + + A+V + PF++ M+ G ++EAK LG + + +P + D Q + Sbjct: 36 AANSANSKKLALVPGVQAEPFYISMQCGAQEEAKKLGYELTVQ-APQKFDATMQTSIVNS 94 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 L + + AP ++ P+ + +G +V +D + ++ + + DN Sbjct: 95 LGSNPPAALLVAPTDDQAMLAPIQQVKNRGAKIVEVDTSLKDKSVAVSSVSS------DN 148 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 G A + +G + G V I++ AG ++ AR G + K +K V Q Sbjct: 149 AEGGKLAAQTMAKLVGDKPGSVLILDTIAGTSTTAARAKGFEDELKNHPNLKSVGIQFTQ 208 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 + +A T L P++ I+ N G A + NAGK GKV +VG D P Sbjct: 209 NEPEQAASKVTAALVSTPDLVGIFATNLNTGEGAATGLRNAGKIGKVNLVGFDASPSEVD 268 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 ++ G+ A +AQ+PA IG G+ V A + Sbjct: 269 GLKKGEYQALIAQDPAQIGTKGVDQAVAALEGK 301 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 122/304 (40%), Gaps = 24/304 (7%) Query: 16 MLSTSAFAAAE---YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 M + A A + T P+ K I EA V++ + E + Q+ Sbjct: 23 MPAGDAVAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKH-PDVELIITDGEDRTEKQV 81 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 E+L + + +P S L V +A I + LD ++ D F Sbjct: 82 ADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETD-------QYTQF 134 Query: 133 VTTDNVAVGAKGASFIIDKLGAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIK 189 V DN +G + ++ LG +G G + I G G R +G E K IK Sbjct: 135 VGGDNKLIGRAAGEYAVELLGGKGKAQGNIVEIWGGMGTQPAHDRHDGFHEFTDKEPGIK 194 Query: 190 -LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVG 248 L+ Q DW + +A ++ L+ N I +Y ND MA G A +AG+ ++ +G Sbjct: 195 NLLDKQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLAAKDAGREKEIKFIG 254 Query: 249 TDGIP-EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 D +P E V G++TAT GA GL+ V K KV + +D++ Sbjct: 255 IDALPNEGVTWVSNGELTATFLYATP--GAEGLRQAVKFLKGEKVE------KTVTLDTL 306 Query: 308 LVTQ 311 VT+ Sbjct: 307 KVTE 310 >UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKL8_9FIRM Length = 325 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 127/331 (38%), Gaps = 35/331 (10%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA--------------------EYAVVLKTLSNPFWV 40 M K + + + M++ + + + + + N F V Sbjct: 2 MKKKMLAVAVCVSMCMMAFAGCTSESGGGSDKKAEQTEGKKEESGKVFMTVSNQQNEFMV 61 Query: 41 DMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPV 100 M + ++ + G V + ++ D Q+ E ++N + I P S L + Sbjct: 62 GMAENFKEVGEAAGYEVQLM--DADLDATKQVSQIETAISENAEAILVEPCSVDGLTTGL 119 Query: 101 ARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVA 160 A GI + + + +L V + + D G +I G + ++A Sbjct: 120 KEAHDAGIPVFVIHNNVSATDL------VTSLIHVDVRQGGELKMEQVIKDCGED-AKIA 172 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 I+ G G + G +K +++V +W A +A N L I AI Sbjct: 173 IMTGTLGQDTTNQICGGYDAVLEKYPNVEVVFEGAGNWGATDAAPLAENWLASGKEIDAI 232 Query: 221 YCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 C ND MA+GV + +AGK+ ++ V G D E K V++G+M AT+ + Sbjct: 233 VCNNDGMALGVVSVLKSAGKSEQIKVYGLDATNEGLKAVDSGEMAATIYVDSKAEIEKAF 292 Query: 281 KLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +++ D + KV K P S+LVT+ Sbjct: 293 EMLEDLKAGKKVDAEYKVP------SVLVTK 317 >UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8H8_ARTCA Length = 322 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 84/310 (27%), Positives = 136/310 (43%), Gaps = 19/310 (6%) Query: 11 TLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 TL G S++A ++ E VV+ L +P M ++ A GV ++I + S Sbjct: 20 TLTGCAGSSNATSSGEAAKTYNIGVVVLDLQDPDLAHMTDAMKKTADEKGVKLNI--TDS 77 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 + D S+L EDL + + PL R I L L + + Sbjct: 78 KKDVGSELNQVEDLLTRQVDAVIMQPLDGDASQNAAKRVIAANIPLFILST----EFAEG 133 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK 184 + ++++ D+ G A ++ +KL GG + G G + + R+NG + + Sbjct: 134 SDVGYKSYIGVDDTVAGQMQAEYL-NKLMPNGGNLVFAAGVYGASWTDRRKNGFDKTINE 192 Query: 185 ASQIKLVASQPADWDRIKALDVATNVLQRNP--NIKAIYCANDTMAMGVAQAVANAGKTG 242 K+VA A R A + LQR P I A+ ND MA+G A A+A+AG+T Sbjct: 193 --NFKIVAEFQAKGSRDDAKRNMEDTLQRFPSGQIDAVVANNDEMAIGAASAIADAGRTA 250 Query: 243 KVL-VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 + VVG DG A + +E G M+ATV Q+ A G ++++ D G V P F Sbjct: 251 EFKAVVGVDGTEPALQDIEGGTMSATVRQDSAGQGVKAVEVVTDFLNGGNVDNRYTLP-F 309 Query: 302 KLVDSILVTQ 311 L+ +++ Sbjct: 310 TLITKDNLSE 319 >UniRef50_C3RC01 ABC-type sugar transport system n=5 Tax=Bacteroides RepID=C3RC01_9BACE Length = 282 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 6/265 (2%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGV-SVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + +V+K+L F+ MK+G A L + + ++ + + Q+ L L ++ Sbjct: 6 KIGLVMKSLQADFFKVMKEGAIQYAAPLPFLDLVCVGTATQTEVKEQIDLMYSLIHQQVD 65 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 I P+ S LV P A +KGI ++N+D ++D L++AG V AFV DN A + Sbjct: 66 AIVLVPIDSKALVQPAVEAVRKGIPVINIDIQLDAQLLEQAGVEV-AFVGPDNFAAAYEV 124 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 + KL E +VAIIEG A + + R+ G +A ++ ++LVAS+PADW+ KA Sbjct: 125 GKLLGKKLRNE-DKVAIIEGLAAADNAQQRKRGFIKAIEE-KGLRLVASEPADWETEKAA 182 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 +V + R P++KA+YC+ND MA+GV Q + K + VVG D ++ + G++ Sbjct: 183 EVFQAMWMRYPDLKAVYCSNDAMALGVLQQMQE--KKCYLPVVGFDNDAVMKEFLSTGKL 240 Query: 265 TATVAQNPADIGATGLKLMVDAEKS 289 AT + + G++ +D + Sbjct: 241 VATADIFSSQMAVRGIEFALDVLEG 265 >UniRef50_B5K960 ABC transporter, periplasmic sugar binding protein n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K960_9RHOB Length = 254 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 12/238 (5%) Query: 51 KTLGVSVD-IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIY 109 GV ++ I+ P + D Q + E + GIA A L V V + A K G++ Sbjct: 2 AKRGVEIEMIWDQPPQADVADQNRRIETNIGRQPDGIAVACLDRVTNVQLMNEAVKAGVH 61 Query: 110 LVNLDEKIDMDNLKKAGGNVEAFVTT-DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGN 168 ++N + D + FV +V G ++ ++LG EG +AI+ G Sbjct: 62 VINFNSFCD---------DAFPFVGPKSSVQDGYDLGEYLAEELGGEG-TIAILSGSLTA 111 Query: 169 ASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMA 228 + R G +A + ++++V QP + +A+ + N+LQ +P+I I+ +N + Sbjct: 112 SDHVERIEGFKDALSQHPEMEIVFEQPDNDILDQAITLTENMLQAHPDIDGIFGSNASNP 171 Query: 229 MGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 +G A+AV NAGK G++++VG D +PEA V +G ++A AQ D+G + +V Sbjct: 172 IGAARAVQNAGKAGEIVIVGMDDLPEAVDFVCSGVISALKAQRQWDMGYWTILYLVAM 229 >UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRB9_9FIRM Length = 333 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 15/302 (4%) Query: 1 MNKYL-KYFSGTLVGLMLSTSAFA----------AAEYAVVLKTLSNPFWVDMKKGIEDE 49 M K + S LV ++ A A ++ + P+ K E Sbjct: 1 MKKRMSVVLSMALVMGIMGQCAIAVNAASKTDDDTLNITLINQGSGQPYIAAYKNCFEKA 60 Query: 50 AKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIY 109 K L + V++ D Q ++ + GI +P+ + V A GI Sbjct: 61 EKDLNIKVNLV--DGGWDANQQANAIQNAISSGADGIVISPVDPSAVCTYVDEALDAGIE 118 Query: 110 LVNLDEKIDM-DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGN 168 + L +I D V VG + L G++AIIEG G Sbjct: 119 VCALTTQIGTGDAEDPVYPETVGLVGHIETEVGRTAMDIAAEALD-RSGKIAIIEGTPGM 177 Query: 169 ASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMA 228 + E R+ G E K+ I++V+ +W KA N++Q NP ++ + C +D MA Sbjct: 178 SDTEGRKKGIDEENKEYPDIEVVSRVCGEWVVDKAYTAMQNIIQSNPEVELVICHSDNMA 237 Query: 229 MGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 +G A+A+ +A T KV +VG G +A +++ G++ T+ P T L+ + Sbjct: 238 VGAAKALEDADMTDKVKIVGIGGSKDALDLIKKGEIYGTIMYVPETEAYTALEATAKVVR 297 Query: 289 SG 290 Sbjct: 298 GE 299 >UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Thermotoga RepID=B1LAH5_THESQ Length = 343 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 123/298 (41%), Gaps = 23/298 (7%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + K+L+NP+W ++ G++D A+ LG+ IF +P E D Q + K G Sbjct: 24 TILLAPKSLNNPYWFAVENGMKDAAEKLGIKA-IFDAPVEADAAKQAEKILSYIVKGVDG 82 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I +P + + V RA KGI ++ D A++ T+N G + Sbjct: 83 IGISPNDPEGIKVVVKRALDKGIPVIMFDSD-------SPDSGRYAYIGTNNYNAGYEAG 135 Query: 146 SFII---DKLGAEGGEV--AIIEGKAGNASGEARRNGATEAFKKASQ-----IKLVASQ- 194 + +K AE + AI+ G + R G +A + S+ I VA Sbjct: 136 KLMAQLIEKYRAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPF 195 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMG----VAQAVANAGKTGKVLVVGTD 250 P D D KA+ + +V ++ ++ + + V A+ + +LVVG D Sbjct: 196 PCDDDSAKAIQIIRDVTRKYTDLDGWFMSGGWPLFAPKETVISALGGPERMKDLLVVGFD 255 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 + ++V+AG + V Q P D+G + ++ + K G L P+ D + Sbjct: 256 TLLPELELVKAGAVKGLVGQRPYDMGYLSVLVLYNMAKIGVENTLKMLPKVVKEDGTV 313 >UniRef50_B2JDH5 Periplasmic binding protein/LacI transcriptional regulator n=83 Tax=Proteobacteria RepID=B2JDH5_BURP8 Length = 321 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 24/316 (7%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAA-------EYAVVLKTLSNPFWVDMKKGIEDEAKTLG 54 + +ML T A A + + + L+NP++V M+K + D A ++G Sbjct: 15 RTLRLRATLAFAAVMLGTPLLAPAAADAAPLKIGMTFQELNNPYFVTMQKALNDAAASIG 74 Query: 55 VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 114 +V + + + D Q+ ED+ K + P S + V A K Sbjct: 75 ATVVV--TDAHHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVTSAKKA-------- 124 Query: 115 EKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEAR 174 + + A G V++FV + N G ++ +G GEVAI++G R Sbjct: 125 GAVVVAVDANANGPVDSFVGSKNFDAGQMSCEYLAKAIGG-SGEVAILDGIP-VVPILER 182 Query: 175 RNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQA 234 G A K +K+V +Q +R AL V N++Q +PN+K I+ ND +MG A Sbjct: 183 VRGCKAALAKFPNVKVVDTQNGKQERATALSVTENMIQAHPNLKGIFSVNDGGSMGALSA 242 Query: 235 VANAGKTGKVLVVGTDGIPEARKMVE--AGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + ++GK + + DG PEA ++ + T AQ P D + + + A+K G Sbjct: 243 IESSGK--DIKLTSVDGAPEAITAIQKPNSKFIETSAQFPRDQIRLAIGVAL-AKKWGAN 299 Query: 293 IPLDKAPEFKLVDSIL 308 +P + KLVD Sbjct: 300 VPKTIPVDVKLVDKDN 315 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 7/268 (2%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 V P++ + +G+ D + L V +D+ ++ D +Q+ + + I Sbjct: 57 IGVASPNNKVPYFSKLVEGMTDLQEELNVELDVQ--DAQDDTNTQINQIQTFIAEGCDLI 114 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+ +L+ + I ++ +D K+ + K G ++ V D+V G K Sbjct: 115 IMMPVQLESLIPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGE 174 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKALD 205 ++ +L + G +A+I+G G +S R+ G E + A I++VA+Q +D D+ +A+ Sbjct: 175 -LVHQLLGDEGSIALIQGTLGASSQVLRQQGLEEYLSENAPGIEIVAAQNSDQDQSQAIT 233 Query: 206 VATNVLQRN--PNIKAIYCANDTMAMGVAQAVANAGKTGKV-LVVGTDGIPEARKMVEAG 262 V N L R I AI + A+G A+ +A + + V+G D E ++A Sbjct: 234 VTQNFLTRFAKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAK 293 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSG 290 M + Q P D+GA L++ G Sbjct: 294 DMYGSTLQAPYDMGALTLQVAYQCLTEG 321 >UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JCU3_9FIRM Length = 325 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 122/292 (41%), Gaps = 13/292 (4%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVV----LKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 L + + +L A + +++ ++ +N FW + G + A+ ++I Sbjct: 14 LMAAAVVIFAGILKPEATQTKKCSLIYIPKIRDNTNDFWTSVISGCKMAAEEYESDLEIL 73 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 A E + + Q +L + + I F+P S + + A +KGI + +D Sbjct: 74 APDKEENIEEQNKLLKKAIEQKPDAILFSPSSMDSSDELLKEAKEKGIRITYIDSYTKEK 133 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + V TDNV G + KL + ++AI+ G ++ R G E Sbjct: 134 LQ-------DLTVATDNVNAGRMLGEY-ARKLIDKDSKIAIVSHVKGVSTAVEREQGFRE 185 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 + +V + K+ ++A ++++ P+++ I N+ A+GV +AV++AG Sbjct: 186 GLGDYAD-NIVDIVYCNSLYEKSYELAQELMRKYPDLELIAGMNEYSAVGVGRAVSDAGA 244 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 K+ VVG D EA ++E G + Q +G G++ + V Sbjct: 245 KDKIAVVGVDCSQEAINLMEMGVYKGIIVQKAFRMGYIGVEETIHMLNGDAV 296 >UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D2PNL9_9ACTO Length = 335 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 13/295 (4%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 A + ++ P+ M I+ A + ++ + + D Q+ E+ Sbjct: 42 GADGKYVIGMSQANVAEPYRQRMDDDIKAAAAEV-PQFEVKFADAAQDNAKQVADVENYI 100 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + + +P + L V +A+ +GI ++ LD K++ G F+ DNV Sbjct: 101 TQQIDLLIISPNEAKPLTAVVKKAYDQGIPVLVLDRKVE-------GDAYTGFIGGDNVQ 153 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 +G + ++ +K+ GG V I+G AG R G K ++K+VA+ DW Sbjct: 154 IGTEAGKYVAEKVLPNGGNVVEIKGLAGATPQAERNQGFATGIKANPKVKVVATASGDWL 213 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP---EAR 256 R K +L+ NP I +Y ND MA G A G+ ++ +G D +P Sbjct: 214 REKGQAQMDALLKANPKIDVVYAHNDPMAEGAYLAAKAVGREKEMKFIGIDALPIPSGGI 273 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 K VE G++TAT G + I + +L+D Q Sbjct: 274 KAVEQGRLTATFTYPTN--GKEAIAAAKKLLVDCGTIEKTQTLPTRLIDKTNAAQ 326 >UniRef50_A6LW07 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW07_CLOB8 Length = 326 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 23/304 (7%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF--------------AAAEYAVVLKTLSNPFWVDMKKGI 46 M L+ L L ++ + + ++ +NP+W+D+K G Sbjct: 1 MKFLKSVLVIILIALFLGSNLYFINLLRDKKVEKEPIKPKIVLISHIKTNPYWLDIKAGA 60 Query: 47 EDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK 106 E AK G V+ P+ + L+LF+ ++ GI + A +K Sbjct: 61 ERAAKERGAVVEFL-GPTTASTEDGLKLFDMATSAKVSGIITYVQEEGQYKKKINSAMEK 119 Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 GI +V +D + N A+V TDNV G ++ ++G G VAI+ G Sbjct: 120 GIPVVTIDSD-------EEDSNRIAYVGTDNVLAGQVAGKEMVKQIG-TSGNVAIVMGGK 171 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDT 226 + + R G T+ K S +K+V + +D ++A + +L RN NI A++C + Sbjct: 172 NVKNQKERVEGFTQYIKSNSNLKIVDTDSSDAMLLEAEIITRKILNRNDNINALFCTSAL 231 Query: 227 MAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 +G A+AV + +V ++ D + + + G ++AT+ Q ++G + +++D Sbjct: 232 DGIGAARAVKDLNYKDRVKIICFDDLDDTLSNIRNGLVSATIVQKSNEMGYRAVNIIMDK 291 Query: 287 EKSG 290 + Sbjct: 292 IEGK 295 >UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Clostridiales RepID=C2L0R0_9FIRM Length = 333 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 16/272 (5%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A V L ++ F+ ++ +E++AK G ++D+ + GD QL +D K Sbjct: 58 AKTIGVSLLNSTHVFYNSIQTAMEEQAKEYGWTLDVQ--DAAGDANKQLGQVQDFITKKV 115 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I AP +S + A K GI + +D D G V TDN G Sbjct: 116 DAIVIAPTNSAGSKSMIELAEKAGIPVFTMDIASD--------GKPVTHVATDNKKGGQL 167 Query: 144 GASFIIDK-LGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRI 201 A ++++ L + G VA+I S R G T+ K+ A IK+V Q D+ Sbjct: 168 AAEYVVNNILTEKKGNVAVITYSE-IESCVDRETGFTDYLKENAPDIKVVDVQNYSGDQQ 226 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 KA DV N+L +N NI ++C D A+G ++ A K ++G DG PE ++ Sbjct: 227 KAADVMQNMLLKNDNIDVVFCVGDPAAIGALSSITAANAATK--IIGYDGNPEGVAEIKK 284 Query: 262 -GQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 G A VAQ+PA IG T L+ + + KV Sbjct: 285 GGNWVADVAQDPAGIGKTTLEAIKKHLEGEKV 316 >UniRef50_A8L4W4 Periplasmic binding protein/LacI transcriptional regulator n=15 Tax=Bacteria RepID=A8L4W4_FRASN Length = 363 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 18/291 (6%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 ++ K+ +NPF+V M+ G + A+ V + +GD+ SQ+ E++ + Sbjct: 58 PTVGLITKSYTNPFFVKMRDGAQQAAREQKVELLTATGRFDGDYASQVSAIENMVAAGAR 117 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI P S +V + +A +G+ ++ LD D + V+A +TDN G Sbjct: 118 GILITPNDSKAIVPAIEQARHRGVLVIALDVPTDPE------SAVDALFSTDNFKAGILI 171 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNA-SGEARRNGATEAF----------KKASQIKLVAS 193 + +G +A ++ + G R NG F ++A+ +V S Sbjct: 172 GEYARAAMGDTPARIATMDVSSHITGGGLLRHNGFLVGFGALDVTVSETQQATPPSVVCS 231 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 + + D+ K + L+ +P+I +Y N+ A G A+ AGK V++V DG Sbjct: 232 RDSKGDQAKGRTAMADCLRTDPDINLVYAVNEPAAFGARTALDAAGKA-DVMIVSIDGGC 290 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 + V G++ AT Q P + G+ +VD K G + L+ Sbjct: 291 TGVRAVRDGKIAATSQQYPLKMAEQGVAAVVDYVKDGTKVSGYVDTGTTLI 341 >UniRef50_B2SY92 Periplasmic binding protein/LacI transcriptional regulator n=7 Tax=Burkholderia RepID=B2SY92_BURPP Length = 317 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 17/306 (5%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 L + L + + A + + + L+NP++V M+K + D A ++G +V + + + Sbjct: 21 LATLAFGLSFIAAPAAQAAPLKIGMTFQELNNPYFVTMQKALNDAAASIGATVVV--TDA 78 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 D Q+ ED+ K + P S + V A K + + Sbjct: 79 HHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVTSAKKA--------GVVVVAVDAN 130 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK 184 A G V++FV + N G ++ +G GEVAI++G R G A K Sbjct: 131 ANGPVDSFVGSKNYDAGEMACEYLAKSIGG-SGEVAILDGIP-VVPILERVRGCKAALAK 188 Query: 185 ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKV 244 A +KLV +Q +R AL V N++Q +PN+K ++ ND +MG A+ ++GK + Sbjct: 189 APGVKLVDTQNGKQERATALSVTENMIQAHPNLKGVFSVNDGGSMGALSAIESSGK--DI 246 Query: 245 LVVGTDGIPEARKMVE--AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 + DG PEA ++ + T AQ PAD L + + A+K G +P + K Sbjct: 247 KLTSVDGAPEAIAAIQKPNSKFVETSAQFPADQVRIALGIAL-AKKWGANVPKTIPVDVK 305 Query: 303 LVDSIL 308 ++D Sbjct: 306 MIDKSN 311 >UniRef50_D2C7R7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C7R7_THENR Length = 350 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 127/302 (42%), Gaps = 31/302 (10%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + K+L+NP+W ++ G++D A+ LG+ IF +P E D Q + K G Sbjct: 24 TILLAPKSLNNPYWFAVENGMKDAAEKLGIKA-IFDAPVEADAAKQAEKILSYIVKGVDG 82 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I +P + + V RA KGI ++ D A++ T+N G + Sbjct: 83 IGISPNDPEGIKVVVKRALDKGIPVIMFDSD-------SPDSGRYAYIGTNNYNAGYEAG 135 Query: 146 SFII---DKLGAEGGEV--AIIEGKAGNASGEARRNGATEAFKKASQ-----IKLVASQ- 194 + +K AE + AI+ G + R G +A + S+ I VA Sbjct: 136 KLMAQLIEKYKAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYVADPF 195 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM---GVAQAVANAGKTGKVLVVGTDG 251 P + D KA+ + + ++ ++ + +N ++ + A+ + ++L+V D Sbjct: 196 PCNDDAAKAIQILRDASRKYTDLDGWFASNASLVAPPNTIISALGGPQRAKELLIVAFDT 255 Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG---------KVIPLDKAPEFK 302 + ++V+AG + + Q P D+G L+ K G K++ P++K Sbjct: 256 LEPELELVKAGVIKGLIGQRPYDMGYFSTVLLYFMAKDGVEKTLGNLEKIVAEYGKPDYK 315 Query: 303 LV 304 +V Sbjct: 316 IV 317 >UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Enterobacteriaceae RepID=B5XZZ5_KLEP3 Length = 311 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 16/297 (5%) Query: 17 LSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 S +A AA + +++ +L NP++ KG ++A+ LG + + D + Q +L Sbjct: 16 FSFAAHAAEKGTIMIMVNSLDNPYYASEAKGASEKAQALGYKTTVLS--HGEDVKKQNEL 73 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + K +GI S V + +A K GI +V ++ +I +D++ +T Sbjct: 74 IDTAIGKKVQGIILDNADSTASVAAIEKAKKAGIPVVLINREIPVDDVALEQ------IT 127 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 +N G++ A+ ++K+ +G + A + + + R + + + VA Q Sbjct: 128 HNNFQAGSEVANVFVEKMAEKG-KYAELTCNLADNNCVTRSKSFHQVIDQYPDMVSVAKQ 186 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 A I + ++LQ +P++K + C N +A+G A+ A ++ V+VVG DG + Sbjct: 187 DAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAANRS-DVIVVGIDGSND 245 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 R V+AG + ATV I A G+ + + + G+ A + + IL+TQ Sbjct: 246 ERDAVKAGTLQATVMLQAQAIAAQGVTDLDNYLQKGEKP----AKQRVMFRGILITQ 298 >UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJT9_CLOCL Length = 330 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 12/295 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 +ST +++L S+ +W ++K G E AK + ++I A GD Q L Sbjct: 32 ISTQNEKIKNISLILLNQSDDYWKNVKLGAETAAKEFDIKLNIVAPEDGGDITIQQNLIN 91 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + + P S LV PV A KGI ++ +D K++ + + TD Sbjct: 92 EAVAMKVDALLLVPSSFQELVEPVEAAVNKGIIVMTVDSKVNT-------AKIACCIATD 144 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEG--KAGNASGEARRNGATEAFKKASQIKLVASQ 194 N++ G ++ A VA I G K ++ R G E K +I+++ Sbjct: 145 NLSAGKSAGEKLVSL--ARMNSVAAIVGFDKKTGSNEFDRYKGIKEVTKDYKEIQVIDRW 202 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 D A +A ++ N +I I N ++GVA+A+ G GK+ VV DG + Sbjct: 203 CDIKDSNGAERIAKELISNNEDISVIIALNYKASIGVARAIEKLGLKGKIKVVAFDGDYQ 262 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 K +E G + + V Q+P +G +K V + GK IP F ++D+ + Sbjct: 263 EVKYMEDGTIQSVVIQSPFSMGYLAVKNAV-LKLQGKSIPRYIESGFTVIDNDAI 316 >UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alphaproteobacteria RepID=A6UE72_SINMW Length = 310 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 15/312 (4%) Query: 1 MNKYLKYFSGTLVG-LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 M + T L L SA + + + L F+ +K G+E A+ G+ V + Sbjct: 1 MKLSTLLVAATTASVLALPASAAEVKKIGLAVPNLQADFFNQIKLGVEKHAREKGLEVVV 60 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 ++ D +Q+ +DL ++ + P + +P A + GI ++N+D + Sbjct: 61 V--DAKNDTNTQVSQVQDLMIQDIDAFIYIPAGAAAAAVPTRLAREAGIPVINVDRVPE- 117 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 G + F+ ++V FII+K G G++AII G+ G R G Sbjct: 118 ------GAPGDTFIAGESVESAYAVCKFIIEKAGG-SGKMAIIHGQKGTTPEVDRFTGCK 170 Query: 180 EAFKKASQIKLVASQPAD-WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 A + ++L+ Q ++ W + +A N+LQ NP+I I+ D +AMG A+AV A Sbjct: 171 RAIDENKGVELIDQQWSNMWSADEGFSIAQNMLQANPDITIIFGQADGLAMGAAKAVDVA 230 Query: 239 GKTGKVLVVGTDGIPEARKMVE--AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 + KV++ G DG A + + G AT Q+ +G ++ + KV Sbjct: 231 NLSDKVIIGGYDGDVSALEYLARCKGPFIATATQSTQKMGVLAVESALAVAAGEKVE-ER 289 Query: 297 KAPEFKLVDSIL 308 + P L Sbjct: 290 QTPNAVLTTCDN 301 >UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F472_THELT Length = 314 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 128/318 (40%), Gaps = 24/318 (7%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDM----KKGIEDEAKTLGVS 56 M K L + L+++ +FA V + + + M + I+ A V Sbjct: 1 MKKVLIFLL-----LIVTILSFAKFRVGVAIPAADHGWTGGMVWWAQYAIKQYANDPDVE 55 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + + Q+ + L K + P S L +A++ GI+ + +D Sbjct: 56 FYLVTAKE---PSEQIAQVQALLAKGIDALVINPYESAPLTPICVQAFRDGIFTIIVDRG 112 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 I+ + ++ DN G +I +KLG +G V +IEG + E R Sbjct: 113 INSE-------EYNVYIAGDNYMYGYLAGKYIAEKLGGKG-NVVVIEGIPSTINTE-RVE 163 Query: 177 GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVA 236 +A + +K++A QP W R KA ++ +L + PNI A++ +D M GV A+ Sbjct: 164 AFKKALEPYPNVKIIAQQPGYWSREKAFEIMQTLLTKFPNIDAVWTGDDDMLHGVLLALK 223 Query: 237 NAGKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSG--KVI 293 AG+ +++VG KM+ G + P ++ +T + L V A K Sbjct: 224 QAGRDKNIVLVGGACEKNIVKMIMDGHPLIGVDFTYPPNMISTAINLAVMALKGEHLNGF 283 Query: 294 PLDKAPEFKLVDSILVTQ 311 P ++ + VT+ Sbjct: 284 YQRGIPRKIILSTETVTK 301 >UniRef50_Q1M6L8 Putative substrate-binding component of ABC transporter n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M6L8_RHIL3 Length = 340 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 75/309 (24%), Positives = 120/309 (38%), Gaps = 13/309 (4%) Query: 9 SGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 + TL L+ + SA A + V +L P+ V KG E+ AK GV + G Sbjct: 29 ALTLTALLFAGSAMAKDLTFGYVPASLEYPYNVMTAKGFEEAAKEKGVKTVVI--DPRGS 86 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL---KK 124 + Q +DL ++ I F PL SV V + + +V + ++ K Sbjct: 87 VEKQGNSLDDLLSQKVDAIGFLPLDSVVAEGFVDKVSDAKVPIVAIALQVGDSAKRQLKD 146 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG-GEVAIIEGKAGNASGEARRNGATEAFK 183 + A V TDN G L + ++ I+ G + +G A Sbjct: 147 PYPGLSALVATDNYQSGVVAGEMAAGVLPKDKTAKIGIVMGDPAYTIVKLDTDGFKAALD 206 Query: 184 KAS-QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 KA + +VA QP +W + V N L +P+I IY D MA+G A+A+ + Sbjct: 207 KAGAKYTIVAEQPTNWTPDEGEAVCQNFLTAHPDIDLIYSHADDMAIGCARAIDASASKP 266 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 K++ G G + AG+M +V P +G + +A P F Sbjct: 267 KLIATG-GGSKLGHDAILAGEMYGSVCTRPQLLGKLMFDALYEAA----TKPETPKGRFV 321 Query: 303 LVDSILVTQ 311 D +T+ Sbjct: 322 TYDMPPITK 330 >UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0LXA2_GRAFK Length = 907 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 128/315 (40%), Gaps = 19/315 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAA----EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVD 58 KYLK + ++ + + + ++ + +M K ++ EA ++ + Sbjct: 2 KYLKLLLFVFLSILTDSCQVKSEEEKFKVGFSQAMTTDNWRREMNKSMKLEA-SMHPDII 60 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 + +E +Q+ E+ + +P+ S+ + + +A GI + +D KI+ Sbjct: 61 LEIKDAENHITNQVAHIEEFIKDGVDVLIVSPIQSIPITPAIEKAMAAGIPTIIIDRKIE 120 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 G N A+V +N+ +G A +I+ + ++ I G+ G++ R G Sbjct: 121 -------GQNFTAYVGANNIEIGRNAAKYILSHSSGK-ADIIEITGQEGSSPAYERSMGF 172 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + ++K+ DW++ +++L I+ ND MA+G + + Sbjct: 173 KKTLDSVPELKVRHVIKGDWEKTSIQSKLSDLLDSVKAPDYIFAHNDRMALGAWEVARSK 232 Query: 239 GKTGKVLVVGTD---GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 ++ ++G D G ++V+ + AT+ + +KL D +G+ + Sbjct: 233 SLEEEINIIGVDGVFGPNGGIQLVKDNILNATILYPTGGM--ETIKLAED-ILNGENVNK 289 Query: 296 DKAPEFKLVDSILVT 310 + ++DS+ V Sbjct: 290 NNILRTVIIDSVNVD 304 >UniRef50_C5EI71 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EI71_9FIRM Length = 357 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 12/290 (4%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 ++ A V+ K+ F+ +++G ED A G +++ + S D +Q + ED+ Sbjct: 62 ASEATKVIGVIPKSTLFDFYKMVRQGAEDAAAEHGYTINYQGTNSSTDTATQQNIVEDMM 121 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + + + + + +A I ++ D++++ V+ ++ A Sbjct: 122 MSGIDALVISSIDAKAINDTMASL---DIPVITFDDEMNPSVCLTT-------VSVNHEA 171 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 A GA++I +KL +GG+VA++ +AG + R G KK +LV + D Sbjct: 172 AAAAGAAYIAEKL-PDGGKVAVVSAEAGTDVIQQRDRGFENELKKHDGFELVGVYHTEGD 230 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R KA + ++L +P++ A++C N+ + GV++ + + G+T +L VG D E + Sbjct: 231 REKAANTMQDLLSEHPDLVAVFCCNEGASAGVSKILKDEGRT-DILAVGYDSSEELINNI 289 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G + A ++QNP +G + ++A P + LVD+ + Sbjct: 290 YDGSLDALISQNPYGLGYNSVTAAIEAIDGKSDFPDVTESAYWLVDADNI 339 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 12/272 (4%) Query: 38 FWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV 97 + + ++DEA+ G + + + ++ + Q+ EDL +N + +P L Sbjct: 102 YRIAETNSMKDEAEKRGFKLIV--TDAQDNTAKQVSDVEDLIAQNIDLLILSPREFEGLE 159 Query: 98 MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG 157 + A + + ++ +D + AG + ++ TD V G ++ DK G Sbjct: 160 TALQTAKENSVPVILVDRLAKGE----AGVDYVTYIATDFVWEGQAAGEWLKDKTGGT-C 214 Query: 158 EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRN-PN 216 + + G G++S + R G + +K++ASQ +++R + V N+LQ + Sbjct: 215 NIIELTGTVGSSSAQDRATGFAGVVDQNEGMKIIASQTGNFERSEGQKVMENLLQAHGGE 274 Query: 217 IKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 + A++C ND MA+G QA+ AG +LV+G DG ++ K V AG+M+ATV +P Sbjct: 275 VDAVFCHNDQMALGAVQAIKAAGYKPNEDILVIGIDGEMDSFKSVIAGEMSATVVSSP-M 333 Query: 275 IGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 G V+ +G+ +P E +VD+ Sbjct: 334 YGPITFDT-VEKILAGQEVPEQTIMEGVVVDA 364 >UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Bradyrhizobium RepID=Q89VC4_BRAJA Length = 314 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 18/318 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L +G V +M + + A + +V K ++NPF+ + G AK LG ++ Sbjct: 5 MRKLL--LAGIAVAMMATPAFAANYRFVIVPKAMNNPFFDFARDGCLKRAKELGNIECVY 62 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 P E + +Q Q+ +D + G+A + + + A GI ++ D Sbjct: 63 KGPVEHEPATQAQIIQDFVTQKVDGLAISVADVAAMTKSIEAATAAGIPVITFDADA--- 119 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 G A++ T+N G ++ K+ +GG+ A++ G G + R +G E Sbjct: 120 ----PGSKRIAYIGTNNKEFGVALGKQLV-KMRPDGGKYAMVSGGPGAKNLAERVDGVRE 174 Query: 181 AFKKASQIKLVASQP-ADWDRIKALDVATNVLQRNPNIKAI--YCANDTMAMGVAQAVAN 237 A K + ++ S + D A+ T++ P++ AI A +A A+ Sbjct: 175 ALKGSKWTEVAGSPTFCNDDPALAVQQMTDMRTATPDLAAIVPIGGWPMFAPEGFKAFAS 234 Query: 238 AGKT----GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 K GK +V D + +++ G A V Q P ++G + ++ A K G+ + Sbjct: 235 RNKKDIDSGKFTLVVADTLKMQLELLRDGYANALVGQRPFEMGEKAMDTLL-AIKKGEKV 293 Query: 294 PLDKAPEFKLVDSILVTQ 311 P LV V Q Sbjct: 294 PEIVYTGLDLVTKDNVAQ 311 >UniRef50_Q21X74 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Bacteria RepID=Q21X74_RHOFD Length = 346 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 20/297 (6%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 ++ KT +NPF+V MK+G + EAK G + +GD SQ+ E+++ Sbjct: 42 QPVIGLITKTETNPFFVKMKEGAQAEAKKAGAKLMTATGKKDGDTASQITALENMAAAGA 101 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 K I + ++ V + KG+ ++ LD D +A TDN G Sbjct: 102 KTILIT-STGDAIIPTVKKVQAKGVQVIALDSPFD---------GADALFATDNYKAGVL 151 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF----------KKASQIKLVAS 193 + LG + ++A+++ G+ G R NG F + +S + V + Sbjct: 152 IGQYAKAALGDKPAKIAMLDLFPGHPVGAQRHNGFMSGFGLKANDAKSNELSSTAETVCA 211 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 D ++ K N LQ+NP+I +Y N+ A G A+ AGK V++V DG Sbjct: 212 GDTDGNQAKGQTAMENCLQKNPDINVVYTINEPAAAGAYNALKKAGKEKGVIIVSVDGGC 271 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + K AG++ AT Q P + + G+ V+ K+GK + L+ + VT Sbjct: 272 QGVKDTAAGKIAATSQQYPLKMASMGVAAGVEYAKTGKKVSGYVDTGVTLIANKAVT 328 >UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderia RepID=Q0BAE1_BURCM Length = 321 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 14/307 (4%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAA--AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 L + + LST A AA A+++ T S +W KG + EA G+ VD+ Sbjct: 5 KSILSCLALGTISGALSTGADAANQPHVALLMPTQSVEYWALYIKGFQKEAAADGLKVDV 64 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + D Q E + I P+ S +V + + + I LV + D Sbjct: 65 KVTN--YDANEQATQVEQTLAQKPDVIVLVPVDSSAMVPSIRKIDQARIPLVISNSMPD- 121 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG----GEVAIIEGKAGNASGEARR 175 +K + F ++++ G A +I +G G+V +I G G R Sbjct: 122 ---QKYSRYWKVFTGPNDISNGEAAAKAMIQGFKEKGYGDKGKVIVINGPMGTPPQVQRY 178 Query: 176 NGATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQA 234 G + KK A I++V +QPADWD +KA A+ + + ++K +Y ND+ GV A Sbjct: 179 QGFVDGLKKNAPGIEVVGAQPADWDAVKAEAAASALFTQFKDVKGVYTENDSQLRGVVTA 238 Query: 235 VANAGK-TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 G K+++VG + + AG+ ATV Q+P D GA K ++ Sbjct: 239 AQRLGLEPSKLVIVGHGCDAGGVEAISAGKAYATVEQSPFDDGAYAAKAALELATGKTPR 298 Query: 294 PLDKAPE 300 + P Sbjct: 299 AVQYLPN 305 >UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TPE5_ACIAC Length = 322 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 124/317 (39%), Gaps = 20/317 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE-------YAVVLKTLSNPFWVDMKKGIEDEAKTL 53 M K + T + + AA + + + I+ A+ Sbjct: 1 MTKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDA 60 Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 G+ + S ++ ++Q++ + IAF+P+ + A I +V Sbjct: 61 GIELKF--SDAQQKQENQIKAIRSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLT 118 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG--EVAIIEGKAGNASG 171 D ++ + F+ +D V G K ++++K+ G + ++G G+A Sbjct: 119 DRAVNTKDT----SLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDVNIVELQGTVGSAPA 174 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAMG 230 R+ G E K + K++ SQ D+ R K +V L+ I +Y ND MA+G Sbjct: 175 IDRKKGFEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIG 234 Query: 231 VAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 QA+ AG + ++ D + A + + AG++ TV +P +G L V K Sbjct: 235 AIQAIEEAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSP-LLGPQ-LMAAVKDIK 292 Query: 289 SGKVIPLDKAPEFKLVD 305 +GK +P E + Sbjct: 293 AGKTVPKRIVTEEGIFP 309 >UniRef50_A3DI69 ABC-type sugar transport system periplasmic component-like protein n=4 Tax=Clostridium RepID=A3DI69_CLOTH Length = 372 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 12/262 (4%) Query: 36 NPFWVDMKKGIEDEAKTL---GVSVDI-FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 91 + ++ +K GI+ K L GV+VD + P++ D Q+ E + + IA Sbjct: 90 HAWYDAIKCGIDAAVKELAEKGVTVDYEWYGPAQPDAVDQVNSIETAIGQGWDLIAVDVN 149 Query: 92 SSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT-TDNVAVGAKGASFIID 150 + A KGI + D+ N +A FV TD G A + + Sbjct: 150 QPELTGEAINNAVAKGIPVAVFGTS-DVPNCDRAF-----FVGNTDPYGDGCALAKAVCE 203 Query: 151 KLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNV 210 K+G +G ++AI+ G G + E R G + K I++V Q + + KA+ + + Sbjct: 204 KMGGKG-QIAILAGTIGALAHEERLRGFKDTIAKYPDIEIVDEQRDNDEVEKAISITESW 262 Query: 211 LQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 LQ PN+ I C N + +G QAVA+AGK+GK+++ G D A ++ G + Q Sbjct: 263 LQAYPNLGGILCNNMSNPVGACQAVADAGKSGKIVIGGMDHDLRALNALKDGTLYVAQVQ 322 Query: 271 NPADIGATGLKLMVDAEKSGKV 292 N D+G + + KV Sbjct: 323 NCYDMGYKLIYNAIKTIDGEKV 344 >UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH32_NAKMY Length = 350 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 9/296 (3%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 + T A A + + F++ M+ GIE EA LGV+V+ + D Q + Sbjct: 54 VAAPTKAGKDYNVAFIQGVAGDEFYITMQCGIEAEAAKLGVTVNTQGGQ-KFDPTLQTPI 112 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + + I AP + P+ A GI +V +D + + + V+ Sbjct: 113 LDSVVASKPDAILIAPTDVTAMQRPLENAAAAGIKVVLVDTTTEDPSF------AVSQVS 166 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 +DN GA I DK GG+V +I G ++ +AR G +A K S + Q Sbjct: 167 SDNEGGGAAAFKAIKDK-NPNGGKVLVISTDPGISTVDARVKGFEDAVGKDSTFDYLGVQ 225 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 + D A + T LQ++P+I I+ N A G + V AGK+ ++ +VG D P Sbjct: 226 YSHNDPATAAQLVTAALQKDPDIVGIFATNIFSAEGSSTGVKQAGKSDQMTIVGFDAGPN 285 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 K ++ G + A VAQ PA IG GL + + G + P + F ++ + V Sbjct: 286 QVKALKDGTVQALVAQQPATIGTDGLDQAIASLDGGTITPKIQT-GFTIITADNVD 340 >UniRef50_Q2S7D2 ABC-type sugar transport system, periplasmic component n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7D2_HAHCH Length = 318 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 10/291 (3%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 L+ LS + + +VLK SN +W + G + A GV++ ++ + Sbjct: 20 LLALVWLIASPLSQADIHQPKLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDD 79 Query: 66 GDFQSQLQLFEDLSNKNY-KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 GD Q+Q+ ++ + AP S+ +L VA+ + I ++ +D + Sbjct: 80 GDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL------- 132 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLG-AEGGEVAIIEGKAGNASGEARRNGATEAFK 183 AG + V TDN A G A ++ L ++ +A++ +AGNAS + R G + + Sbjct: 133 AGDAHQGLVATDNYAAGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLR 192 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 K +I+++A+ A DR A +L+ P I ++ N++ +G A+ +G + + Sbjct: 193 KHDKIRIIAAPYAGDDRGAARSEMLRLLKETPTIDGLFTPNESTTIGALVAIRQSGMSKQ 252 Query: 244 VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 +G D E + AG+++ V QNP +G ++ +D + GK IP Sbjct: 253 FGFIGFDQTEELEAAMYAGEISNLVVQNPEYMGYLAVQRALDLVR-GKPIP 302 >UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Tax=Proteobacteria RepID=B5XQK7_KLEP3 Length = 317 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 134/312 (42%), Gaps = 19/312 (6%) Query: 4 YLKYFSGTLVGLM--LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 L + T++ M +S ++ A YA+V F+ M KG +D AK G + IF Sbjct: 10 RLLAVATTMLASMSFISAASAAGPTYALVQINQQALFFNLMNKGAQDAAKASGKDLVIF- 68 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 S + +Q E+ + KGI A + ++ V A I ++ +D + Sbjct: 69 -NSNDNPVAQNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAIDAVL---- 123 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAI--IEGKAGNASGEARRNGAT 179 G A V DN+ G + +D + E G A I G +A R+ G Sbjct: 124 ---PAGPQAAQVGVDNIEGGRIIGQYFVDYVQKEMGGQARLGIVGALNSAIQNQRQKGFE 180 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 E K +I + + KA+ A N++ NP++ AIY + +G AV N G Sbjct: 181 ETLKSNPKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAVENQG 240 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 + + V G D +A ++ G +TA + Q+P +GA L +++ SGK +P Sbjct: 241 RQKDIKVFGWDLTAKAISGMDGGYVTAVLQQDPEKMGAEALN-ALNSITSGKTVPKTI-- 297 Query: 300 EFKLVDSILVTQ 311 LV + +VT+ Sbjct: 298 ---LVPATVVTK 306 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 22/297 (7%) Query: 1 MNKYLKYFSGTLVGLMLST------SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG 54 + K L + ++ L + A + + L T NPF++ ++ G + +A LG Sbjct: 2 LRKSLVLLTAGILTLSGCSGTPRDVPAAGSRAVTLALSTEKNPFFLQVRYGAQAKANELG 61 Query: 55 VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 114 + + + + D + Q +D + P S L V++ +KGI + +D Sbjct: 62 IDLTVL--DAGDDAEVQAAQLDD-VSSGVA--VVNPADSEALAPAVSQLNEKGIPAITVD 116 Query: 115 EKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEAR 174 I G +V A + ++N GA AS + + A+G EV ++ G G++S R Sbjct: 117 RTI-------TGADVAALIDSNNTEGGAAAASVLAKAIRAQG-EVIVLRGIEGSSSSAER 168 Query: 175 RNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQA 234 G T+A + ++++VA++ AD+DR A D+ T++L +P++ I+ ND MA+G A Sbjct: 169 YEGFTQAMAEHPRVRIVAAEAADFDRDTARDLVTDLLADHPDVAGIFAENDEMALGAVDA 228 Query: 235 V-ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 + AGK V VVG DG E + V+ ++ AT+AQ +++GAT ++ Sbjct: 229 LGERAGK--DVKVVGFDGTEEGVRAVKNRKLVATIAQQSSELGATAIEQAGKLLDGE 283 >UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B2IJW8_BEII9 Length = 314 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 119/312 (38%), Gaps = 12/312 (3%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 +K V + + + A V + + F ++ + ++L +V++ + Sbjct: 1 MKRILLAAVMAINFSCSAGAESIGVSMSAFDDNFLTVLRNALIAHGQSL-PNVNVQMEDA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 + D Q ++ I P+ + A + LV ++ + + Sbjct: 60 QNDVARQQSQVQNFIASGVSAIIVNPVDTDATEAISKLAADAKVPLVYVNRQPANVDRLP 119 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLG----AEGGEVAIIEGKAGNASGEARRNGATE 180 +AF+ +D G A + L + V ++ G+ N + R + Sbjct: 120 ---ETQAFIASDEAVSGTLQAQEVCRLLKARGKGKSANVVVMMGQLSNQASRQRTKDVHD 176 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + + +K+V Q A+W R +A+++ +N L A+ D MA+G QA+ +A Sbjct: 177 VIATPECAFMKVVEEQTANWQRTEAMNLMSNWLSAGIQFDAVIANADEMAIGAIQAMRSA 236 Query: 239 GKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G +V G DG + +++ G + TV Q+ A GA L + + K Sbjct: 237 GLPVKDYIVAGIDGGRDGIELMRQGYLDVTVFQDAAGQGAGALDTALMLARGKKTDRTIW 296 Query: 298 APEFKLVDSILV 309 P F+L+ V Sbjct: 297 VP-FQLITPTNV 307 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 11/292 (3%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 ++ + + L F+ +K+ +E E K GV I ++G+ +Q+ ED Sbjct: 22 GSTWAKELTIGLAVANLQADFFNQIKQSVEAEGKARGVK--IITVDAQGNSSTQVSQIED 79 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 L + + + P + +PV A GI ++ +D + F+ +D+ Sbjct: 80 LITRQIDALIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPG-------DTFIASDS 132 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 VA A ++ +G +AI++G+ G R G E K +K+VA QPA+ Sbjct: 133 VAGAKALAEYVGKVTDGKG-RIAILQGQLGTTPENDRAKGFQEGLKGFPGLKVVAEQPAE 191 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W + K VA ++LQR+PNI + D MA+G AQAV A + V+VVG DG K Sbjct: 192 WAQDKGFAVAQDLLQRDPNITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLK 251 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 V +G + AT+ Q +G + +D K+GK +P ++ E L V Sbjct: 252 AVASGVLQATMTQQTQKMGRMAVASALD-LKAGKAVPKEQLLETVLTTKDNV 302 >UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDT0_9FIRM Length = 326 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 112/289 (38%), Gaps = 11/289 (3%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 + + T +N F+ + + I K G + A S + Q + L Sbjct: 40 STEPRKIGATYMTYNNTFYSVINEEISRILKEHGDQL--IALDSAMSLKKQKEQIHYLIE 97 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + I AP+ L + A++ I ++ +D ++ K N+ + +DN Sbjct: 98 QQVDAIVIAPVDYEGLEDSLKEAYRNRIPVIVVDTEV------KHNKNITYSIVSDNYDA 151 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G + A ++ KL + +++ SG R G + + K+V D Sbjct: 152 GVQCAKDMMRKLDH--ANIVLLQHS-TTRSGYLRIKGFEDTIQSNENYKVVKRMECDGQL 208 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A+ + ++ + C ND AMG A+++ V G DG PEA++MV Sbjct: 209 EVAMPKMESFIEEGIEFDVVMCLNDPSAMGAMAALSSNNILKDKYVYGIDGTPEAKEMVV 268 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G+M ATVAQ+P G +++ + ++ +++ V Sbjct: 269 EGKMAATVAQSPKTFGKKAGEVIYKLFSQETIKNKNEMSPVQIITKENV 317 >UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasmic component) n=2 Tax=Firmicutes RepID=Q97J33_CLOAB Length = 325 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 17/287 (5%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 ++ T +N F+ + I ++ G + + D Q+Q + K Sbjct: 44 KKFGATYMTTNNRFYEIINDEIRSVVESNGD--ILVTRDAALDKNKQMQQIYEFIKLKVK 101 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 I P+ + + A GI ++ +D + D L V V +DN G + Sbjct: 102 AIFINPVDWKQIKPALIAAKNAGIPVIVVDTPVYDDKL------VACTVISDNYDAGVQC 155 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A +++ + +IE SG R G + + Q K+VA+ ++ K + Sbjct: 156 AKYLMKS--KSKANIMLIEHSK-AKSGIDRIKGFVDTIGASKQYKIVAAGDSEGQLDKTM 212 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + ++++++ N+ AI ND A+G A+ G GKV+V G DG PEA+ M+ G M Sbjct: 213 SLVDDLIKKHTNVDAIMALNDPSALGALAALKENGLLGKVMVFGVDGSPEAKTMIHDGFM 272 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 TAT AQ P IG + D K ++ +V L+++ Sbjct: 273 TATSAQFPNKIGHIAAEKAYDILKGKRL------KRDVIVPISLISK 313 >UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMK8_9CLOT Length = 329 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 9/269 (3%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + ++ SNP+W +K G E AK +D + ++ Sbjct: 39 KPKITLISHVYSNPYWKYIKLGAEKAAKQRNAVIDFQGPDT-ASAGEGIKFINMAYAAKV 97 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 GI + + GI +V +D + A+V TDNV G Sbjct: 98 SGIITYVQDEAMYKPVIDKVLAGGIPIVTVDSDAE-------NSKRLAYVGTDNVTAGRV 150 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 GA +I +G G V II G + R NG TE K S++ + + +D ++A Sbjct: 151 GAKEMIHHVGIYG-NVGIIMGGKNVKNQIERVNGFTEYIKSNSKLNISEIESSDSYLLEA 209 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 +L N +IKA++C + G A+A+ + G KV ++ D +PE ++ G Sbjct: 210 ELATKKILINNKDIKAVFCTSALDGQGAAKALISMGAAEKVKIICFDDLPETLDYIKNGT 269 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKV 292 +T+T+ Q+P +G + +++D + Sbjct: 270 ITSTIVQDPYGMGYKAVNIIMDIMEGKDT 298 >UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Bacteria RepID=C1XTQ0_9DEIN Length = 312 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 10/278 (3%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 L+ A A++ K + ++ ++G ++ A LG I+ P+EG Q++ Sbjct: 1 MLLGMGFAQKQITIAMIPKLVGIDYFNATEQGAKEAAAELGNIRLIYQGPTEGRVDKQIE 60 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 L E+ I+ A V + + +A K GI +V D ++ + N F Sbjct: 61 LIENFITAKVDVISVAANDPVAIAPVLEKARKAGIKVVTWDADANV---RDVFCNQATFA 117 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVA 192 +G + ++G EG EVAI+ + A + K +K+V Sbjct: 118 G-----IGKALVDEMARQVGKEG-EVAIVTSSLTAPNQNAWIAEMKKVLAKDYPGLKVVD 171 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 ++P++ D+ A V ++L+ PN+K ++ + G A+AV AGK GKV VVG Sbjct: 172 TKPSEEDQQLAFRVTQDLLKAYPNLKGVWALSSVAFPGAAEAVQQAGKAGKVAVVGLSTP 231 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 + + ++AG + + V NP D+G + + G Sbjct: 232 KQMKPFMKAGVIKSVVLWNPIDLGYLSVYAAKQLVEKG 269 >UniRef50_C6C3I7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=C6C3I7_DICDC Length = 311 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 128/288 (44%), Gaps = 10/288 (3%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 + + + L L+ A +++ +L NP++ KG + +A+ LG + + Sbjct: 4 RSMLLTAAITSALSLTAHAAEKGTIMILVNSLDNPYYASEAKGADKKAQELGYKTTVLS- 62 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 D + Q +L + K +GI S V + +A GI +V ++ +I +D++ Sbjct: 63 -HGEDVKKQSELIDAAIGKKVQGIVLDNADSTASVAAIKKAKAAGIPVVLINREIPVDDV 121 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 +T +N G+ A+ ++K+G +G + A + + + R + Sbjct: 122 ALVQ------ITHNNFQAGSDVANVFVEKMGEKG-KYAELTCSLADNNCVTRSKSFHQVL 174 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 + + +A Q A I + ++LQ +P++K + C N +A+G A+ AG+ Sbjct: 175 DQYPGMASIARQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAAGR-N 233 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 V+VVG DG + R V+ G + ATV I A G+ + + + G Sbjct: 234 DVVVVGIDGSNDERDAVKEGSLKATVMLQAQAIAAQGVTDLDNFIQKG 281 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 14/310 (4%) Query: 3 KYLKYFSGTLVGLMLSTSAFAA-AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 K + + + M S A A + L+ PF V M++ AK LGV++ + Sbjct: 2 KKITILAAAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQVL- 60 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 S+G Q+ E+ + +G +P + V + +V LD + D Sbjct: 61 -DSQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVKTD- 118 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 +N G F+ + G ++ ++ G+ G++S R G ++ Sbjct: 119 ------KKVPHFGANNYKGGQAIGDFVKARF-PNGADIVLLTGQPGSSSNIERTQGIRDS 171 Query: 182 FKKAS-QIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAG 239 K + +LVA Q +W R + + + +VL P + I AND MA+G +A+ + G Sbjct: 172 LKAGGSKYRLVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQG 231 Query: 240 -KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 K G+V+V G D +PEA V G + AT Q P + + + ++ I Sbjct: 232 LKPGEVMVTGFDAVPEALARVRDGWLAATADQRPGYAVTQAMTQLTNNIRTKSAITGADY 291 Query: 299 PEFKLVDSIL 308 P + L Sbjct: 292 PPTMITKDNL 301 >UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGX0_9BACT Length = 497 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 115/309 (37%), Gaps = 16/309 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAV-VLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 M + ++L A + V + + + + +VD+ Sbjct: 1 MKRINIILIVLSFSMLLLLGACTQKNVVIGVSQCCGGVWREKVNNEMRQAQYQYK-NVDL 59 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + +E D Q Q + + + + I AP + ++ + RA++ I ++ D K+ Sbjct: 60 LFTTAENDGQCQARQIDSMIARKVDLIVVAPDNVNDVTPAIERAYRAHIPVILFDRKVKT 119 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + A + DNV G + A F+ KL +G V I G + R G Sbjct: 120 PH-------YTASIGGDNVEAGREVARFLASKLDGKG-TVVEITGLKDASPVIERHRGFH 171 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 E K IK+V + ++W +A ++ L + + ++ +D A+G G Sbjct: 172 EVMKNYPGIKVV-TLESNWKLERAQELMKQYLDKGGHADGVFGHSDLGAIGAFLEAERRG 230 Query: 240 KTGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 ++L+VG DG+P E V+ GQ A+ G ++L ++ + + Sbjct: 231 IDKQMLIVGIDGLPGEWEGVDRVKRGQFAASYVYPT--QGEKIMELAMNILQGKPYKKDN 288 Query: 297 KAPEFKLVD 305 F Sbjct: 289 VMKSFLATP 297 >UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X5_9BURK Length = 318 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 10/308 (3%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 + L + + L ++A A A + +N W + G + + GV I Sbjct: 4 KRMLGRLTIAMATAGLMSAAMAETTIAYITNGNTNEGWTLINGGAKKAGQKAGVKF-IEL 62 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 + +G+ QL + ED+ + IA AP+ S + + +A GI +V +D I Sbjct: 63 AAEKGELSKQLAIVEDMITRKVNAIAIAPVDSAGIAPAINKALAAGIKVVAVDTGIS--- 119 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 G + ++V TDN+ + +++ +G V + G G ++G+ R+ G + Sbjct: 120 ----GAKITSYVATDNIKAAMVQGDWTAEQI-KDGDTVIYVTGDQGQSTGQERKKGFLDG 174 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 + V WD+ A + L+ NP K I CA D A+G A+ AGK Sbjct: 175 LNAKRKNVKVVEVATTWDQTMAQNGVETALRANPTAKVIACAWDGGALGAKAALMAAGKK 234 Query: 242 -GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 G V + G DG P M++ G +A AQ A IG G++ + A + KV Sbjct: 235 AGDVKIAGFDGSPGGLDMMKQGWQSANAAQMLAKIGQVGVETAIAAAEGKKVEARIDTGS 294 Query: 301 FKLVDSIL 308 F ++ S + Sbjct: 295 FLVLPSNV 302 >UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales RepID=C5EPY8_9FIRM Length = 356 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 17/291 (5%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTL---GVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A+ ++ N + M++ EA+ L GV + + + S D Q+ +DL K Sbjct: 51 VALCNYSIGNSWRAQMEQEFVAEAEKLKAEGVVSEYYITNSNDDINKQISDMQDLITKKV 110 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 GI S L V A + GI +V+ D +D D A V D G Sbjct: 111 DGIVITAASPTALAPAVEEATEAGIKVVSFDNVVDTDEQ-------VATVGIDQTEFGRV 163 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A +++ KL +G ++ ++ G AG A+ R NGA E FK+ I+++ S A WD + Sbjct: 164 CADWLVKKLDGKG-KIVVLNGIAGTANDTMRWNGAEEVFKQYPDIEILGSANASWDYAQG 222 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV---E 260 ++L P I ++ M G A AG+ K++ + ++G A + Sbjct: 223 KAAMESMLSAYPEIDGVWSQGGAMTQGAIDAFIAAGR--KLVPMTSEGNNGALRAWIENR 280 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ +P GA L+ ++ + +V P + +V V + Sbjct: 281 DNGLSCIAPSDPTYSGAEALRTVIKSLDGEEV-PKRVTLDIPVVTEDNVDK 330 >UniRef50_C2AKV1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Actinomycetales RepID=C2AKV1_TSUPA Length = 336 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 16/288 (5%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + ++ KT +NPF+V +++ + +A G ++ A +GD + Q+ E+L ++ KG Sbjct: 39 KVGLITKTDTNPFFVKIREAAKAQADAKGANLVALAGKFDGDNEGQVAAIENLVSQGVKG 98 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I P SS ++ + +A G+ ++ LD + + V+A TDN G Sbjct: 99 ILITPNSSTGILAAIKKARDAGVVVIALDTATEPADA------VDATFATDNTEAGRLQG 152 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF---KKASQIKLVASQPADWDRIK 202 +++ L ++ +++G AG+ + R G + + A ++ ++ + D+ K Sbjct: 153 AWVKGALAGAAPKLLMLDGTAGSTVSDFRHKGFLQGIGLTENAP--EIAGTENTNGDQTK 210 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A N+LQR P+ A+Y N+ A G QA AGK ++ + DG V+ G Sbjct: 211 AQTAMENLLQRVPDANALYTINEPAAAGGYQAAKKAGKAAQLTIGSIDGSCAGVDNVKKG 270 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + ATV Q PA + G+ +V K G K F S LVT Sbjct: 271 MIGATVLQFPAKMAQQGVDAVVAFAKDGT-----KPSGFVNTGSQLVT 313 >UniRef50_D2QME7 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QME7_9SPHI Length = 940 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 108/300 (36%), Gaps = 15/300 (5%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 + S + T + + M ++ E + + +E Q+ Sbjct: 38 MAGCQSATKTKTYRIGFSQCTGGDEWRKTMLHDMKRELT-FHPNYTLLYEDAENSTTRQI 96 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 + L ++ + +P + +K+GI ++ LD KI+ ++ A+ Sbjct: 97 SQIQALIDQGIDLLIVSPNEVAPFAKVIEDVFKRGIPVILLDRKIETES-------YNAY 149 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 + DNV +G FI + L +G + I G ++ + R G E +K I++V Sbjct: 150 IGGDNVEIGRLAGVFIGNHLKGKG-RIVEIWGLPSSSPAQERHRGLLEELRKYPGIQVVK 208 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 W+R V L ++ ++ ND MA+G G K+ VG D + Sbjct: 209 ELNGQWERDTVGRVVAAELNTLKDVDLVFAHNDVMALGAYAVCKQKGIEKKLDFVGIDAL 268 Query: 253 P---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 P + + G + A+ G ++ +GK + ++ +D V Sbjct: 269 PGPNAGMQAITDGILKASFLYPTG--GEEAIETATR-ILAGKSVKREQVLNSIQIDGSNV 325 >UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDF0_9FIRM Length = 333 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 19/281 (6%) Query: 36 NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN 95 NP+ V + + ++ A GV+ + + D + + ED+ K+ + AP+ Sbjct: 61 NPWMVALTESMQQSADEYGVNY--IYTDANDDMATHVANIEDMLAKDLDILVIAPMEDTG 118 Query: 96 LVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 L + A +KG+ ++ + + G V +D G + A I +K+ Sbjct: 119 LEAVLDEAAEKGVPVIL--------SARTTQGEYVTTVYSDQAWEGERCAELIGEKIPD- 169 Query: 156 GGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKALDVATNVLQR- 213 +V + G G +S R G + ++ +++V Q A++ R +A+D N+LQ Sbjct: 170 -AKVVELRGIEGTSSVAGREKGFRDVMAEQYPDMEIVVEQTANFSRQEAMDAMANILQAK 228 Query: 214 NPN-IKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 P+ I A+YC ND MA+G QA+ +AG T + VVG DG EA ++V++G+M TV Sbjct: 229 GPDAIDAVYCHNDEMALGAVQAIKDAGLTPGEDIQVVGIDGQKEAWELVKSGEMLGTVQC 288 Query: 271 NPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +P G T +++ V P+ +++ V + Sbjct: 289 SPKH-GPTVFEVIQKILDGETVQKETIVPD-QVITKENVDE 327 >UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C307_9CLOT Length = 372 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 75/286 (26%), Positives = 127/286 (44%), Gaps = 20/286 (6%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 +S + ++ K L W M++ + A L + +I +E D Q++ F+ + Sbjct: 37 SSDNKDGKIYLLHKGLDYYAWAAMQEAFDKYAGDLDCNYEIL--NAENDVSKQVEQFKTV 94 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 ++ K I + S +L+ V A GI + D I GG+++ V DN+ Sbjct: 95 LTQDPKAIIVTAIDSESLIDCVKEANDAGIPVGVYDTPI-------TGGDIDITVDCDNL 147 Query: 139 AVGAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 G + A I+DKL G E G+V + G + + R+ G +K I+++ Sbjct: 148 MAGQQAAEIIVDKLKEKNGEEKGKVLNVFGDLASQVMQERKQGFDNVMEKYPNIEVI-EA 206 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLVVG 248 DR+ + D A+N L N +I A++ D GV +AV +AGK G +++V Sbjct: 207 SGKGDRLLSQDAASNALAANEDIDAVHAPCDNAFYGVYEAVESAGKLKKVGEEGHIIMVS 266 Query: 249 TDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 DG P A + G M TV + + A L++M GK +P Sbjct: 267 LDGEPAALDRISEGYMDGTVNLDWHAVAAICLEMMDKYIFEGKDLP 312 >UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Proteobacteria RepID=A5G0N2_ACICJ Length = 345 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 8/242 (3%) Query: 33 TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLS 92 + +NPF K + D AK V + + + + Q+ E++ N+ + + APL Sbjct: 65 SNANPFRAGETKSVRDAAKAFHVR-RLIYTNAHSNQSRQVADVENMINQGAQALIIAPLD 123 Query: 93 SVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV-AVGAKGASFIIDK 151 S L A+A K I ++ LD + + +F+ ++ G A + Sbjct: 124 STGLQPAFAQAAAKHIPILTLDRRTAGSKC----SDYLSFLGSNFYFKQGEIDARELAKA 179 Query: 152 LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 G VA I+G GN+ AR G K +K+V Q +W A V + +L Sbjct: 180 TGGH-AMVAEIQGAYGNSVEVARTKGFAAGLKAYPGMKIVTEQTGNWFTTDAQKVMSQIL 238 Query: 212 QRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQ 270 +PN+ A+Y DTMA G A+ +AGK G+V +V DG + + + G + A Sbjct: 239 LAHPNVNAVYAQADTMAFGAITALRDAGKKPGQVKIVSIDGTRQGVQDIVDGWIYADDET 298 Query: 271 NP 272 NP Sbjct: 299 NP 300 >UniRef50_A9BGQ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGQ4_PETMO Length = 342 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 13/274 (4%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 + ++K N FW + G + A GV + SE + Q+ + E + Sbjct: 40 QSSDMTIFFIVKASENEFWQIVLDGAQKAANHFGVEFIHQEATSESEVSRQVSILETAIS 99 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 N I AP + LV + RA GI ++ +D + DN +F+ +DN + Sbjct: 100 TNPDAIVLAPTVADALVPGIERAMDSGIPVIIIDSMANTDN-------YVSFLGSDNYTI 152 Query: 141 GAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQP 195 G + A + L G+ G+VA I +G S EAR +G + ++ I++V+ + Sbjct: 153 GQRSADELAKALEEKNGSPSGKVAAITYMSGVGSLEARISGFLDRIEEAYPDIEVVSVRD 212 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 A +++ ++L P++ +Y N + +A+ G+ + V D + Sbjct: 213 AMGQVGNTINITLDLLTAYPDLDGLYANNQMTGDDMVRALDMQGR-NDLAAVAVDASAQE 271 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 +E G + + + Q P +G G+ V A Sbjct: 272 IWGLENGYLDSVLVQQPWVMGYAGVAYAVMARNG 305 >UniRef50_C6CRC9 Sugar ABC transporter (Sugar-binding protein) n=9 Tax=Bacillales RepID=C6CRC9_PAESJ Length = 337 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 11/260 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 +Y +V +W + KG ED A+ LGVSV+ + ++ D Q ++ + E + ++ Sbjct: 44 EKYVMVNFLAGIDYWKNGLKGFEDAAEALGVSVE-YRGSTQYDVQEEMMVLEQVIARSPA 102 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GIA + + S L + +A + GI +V D +++ T+N G Sbjct: 103 GIAVSAIDSEALNPAINKAVEAGIPVVMFDADA-------PRSKAYSYIGTNNYNAGVTA 155 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKA 203 A + + G G +V +I + + R G E K+ ++LV D++ + Sbjct: 156 ARKMAELTGGTG-KVGVIT-LPNQLNHQERTRGFEETLEKEFPDLQLVGIADGKGDQMIS 213 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 ++L + ++ I+ +G A+ K +V ++ D MV++G Sbjct: 214 EQKVRDLLSKFTDLSGIFVTEANGGVGAGNAILRLNKLDQVKIISFDTDKGTLDMVKSGT 273 Query: 264 MTATVAQNPADIGATGLKLM 283 ++AT+AQ ++G L + Sbjct: 274 ISATLAQGTWNMGYWSLMQL 293 >UniRef50_A9KK42 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KK42_CLOPH Length = 320 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 14/314 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTLG 54 MN + K L+G+ML T + + A++ K+ + FW + G A Sbjct: 1 MNTFKKIVVWILLGVMLITLVSCSNKDNKKHYVAMITKSTKSAFWQSVFAGASAAATEYN 60 Query: 55 VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 114 +S+ E D++ Q L + + F+ + + A KKG+ ++ +D Sbjct: 61 LSISYAGPELEEDYEYQNDLIYQAIEDGAEAVIFSAVDYNANAKAIEDAAKKGLKVIIID 120 Query: 115 EKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEAR 174 ++ + V + TDN A G + E + I+ +A+G+ R Sbjct: 121 SDVNSN-------QVTCRIGTDNYAAGCMAGEAALAS-SEEKIHIGIVNYDINSANGQQR 172 Query: 175 RNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQA 234 +G E K S++ + + A +L+ +P I I N+ ++GV A Sbjct: 173 EDGFREIVSKDSRVIDIVTINVVSTTEDARKGTKQLLEEHPEINVIATFNEWTSLGVGWA 232 Query: 235 VANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 + + + VV D + M+E G++ A + QNP +G G++ + + + + Sbjct: 233 IRDLNLADETTVVAFDSNVVSVGMLETGEVDALIVQNPYAMGYLGVEKVAELIRGQSIEK 292 Query: 295 LDKAPEFKLVDSIL 308 L+ Sbjct: 293 GTIDTSTTLITRDN 306 >UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTB0_9CLOT Length = 358 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 11/286 (3%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + + + V ++ EA++ G + S +E D Q+ EDL ++ Sbjct: 72 KVGFSELAIDGAWRVAQVDSMQKEAESRGY--EFVMSNAELDTAKQISDVEDLLTQDLDF 129 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + AP+ ++ + A KG+ + LD + + G + + ++ + G A Sbjct: 130 LFIAPIDMEAIMPAIEAAKAKGVPTILLDREAN----GTPGVDYICTILSNYIWQGEACA 185 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++ + GA+ ++ I GK G + R+ G KK +++VA+Q +W R +A Sbjct: 186 DWLSENGGADSYKIVQITGKVGGSDVRDRQAGFETGVKKYENMEIVATQSGEWSRTEAQK 245 Query: 206 VATNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAG 262 V N++Q + +YC ND MA+GV A+ AG V V+ DG EA + + AG Sbjct: 246 VMQNIIQSTGGDFNVVYCHNDEMALGVVLALKAAGMNPGTDVKVIAIDGQAEAVEAIIAG 305 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 +M NP G M K+ + E+ ++DS Sbjct: 306 EMNCIATCNP-RFGPVAFDTMEKYLNEEKLEHIINNEEY-IIDSTN 349 >UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDP6_9FIRM Length = 309 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 123/302 (40%), Gaps = 17/302 (5%) Query: 9 SGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDF 68 +G+ ++ T++NP++V+M + IE+ + G + D Sbjct: 12 LFIAIGIHEKKDTRKQLKFGATYMTMNNPYFVNMDENIEESVQAKGD--ILITRDPLQDQ 69 Query: 69 QSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGN 128 + Q + +D+ N+ + P+ + + KK I + +D ++ Sbjct: 70 KKQNEQIKDMINEGIDVLFLQPVDRNKVRPALELCKKKHIPVFVIDSEVSDTEA------ 123 Query: 129 VEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQI 188 V + + +DN G + A ++ K + I+ KA N+ E R G + K Q Sbjct: 124 VVSTIVSDNYDAGVQCAKDMMKK--KTSANIIIVNQKALNSINE-RVKGFRDTIKGHPQY 180 Query: 189 KLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVG 248 K+V + + + A+ V ++ N + ND +A+G A+ KT +V+V G Sbjct: 181 KIVEEKESAAEFEIAMKVMEKIIYEKKNYDVVMGGNDPIALGCIAAMQMTDKTDQVMVYG 240 Query: 249 TDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 DG P+ + M++AG + T AQ+P IG ++ V + + L Sbjct: 241 VDGSPDGKAMIKAGFLEGTAAQSPIKIGEKAVQTAYSYLAGETV------KKHVTIPVEL 294 Query: 309 VT 310 +T Sbjct: 295 IT 296 >UniRef50_UPI0001C31E06 ribose ABC transporter, substrate binding protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E06 Length = 340 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 12/289 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + PF+ + +G + +A + DI S SE D Q+ ++ + Sbjct: 49 KKVVYSTFGAQIPFFNRIGEGAKAQATVRRLDFDI--STSEIDPGKQIDSIDNAVAQQPD 106 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 G+ +P+ LV + A + G+ ++ L + + D + +FV +D +G Sbjct: 107 GLIVSPIDGSALVPTIKGAVEDGVPVILLADGLSEDVGQL------SFVGSDFAEIGRLK 160 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD-WDRIKA 203 A++I D+LG +GG VA++ G G + E + A E F++ I++V + Sbjct: 161 ATYIADRLG-DGGTVAMVNGTRGMSFVEEQGEAAREVFEER-GIEIVDDVYTKAITPDEG 218 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMVEAG 262 L N+L R+ ++ AIY + D A+G +A+A GK++VVGTD A V AG Sbjct: 219 LTATQNILTRHSDVGAIYYSGDDGALGGIRAIAARNIAPGKIVVVGTDANEGALAAVRAG 278 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 M TV+Q + G + +M D ++GK +D+ + + Sbjct: 279 TMALTVSQCAYEQGGIAIDVMADYLETGKKPDRRIFTPVIEIDTETIDR 327 >UniRef50_C6CWF6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF6_PAESJ Length = 327 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 114/285 (40%), Gaps = 10/285 (3%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + A++ + L NPFW +++G A + + + P + + Q++L E Sbjct: 49 RQIALISQELDNPFWRSVEEGAMKAAGQYRMELQ-YMGPFRINAEEQMKLLEKAIASKMD 107 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI + S + +A K GI ++ +D + G A+V T+N G + Sbjct: 108 GIIMQGIGSERDKALIEKANKLGIPVITVDTD-------EPGSKRLAYVGTNNSFAGQEM 160 Query: 145 ASFIIDKLGAE-GGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 I + E G + ++ G A+ R G + + + ++ R++A Sbjct: 161 GHLIAEDGQKEPSGVIGVLVGSKEAANQRLRLEGFQSVINTYKGLSIAEVRASNISRLQA 220 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 A +L+ +P I + + +G+A+AVA K G V + D + + + Q Sbjct: 221 AQQAEQMLKEHPEITYMVGFSSLDGIGMAEAVARV-KPGGVTIFAFDDLEDTLAAIRKKQ 279 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 + A++ Q P +G + L+ + V P + D + Sbjct: 280 IEASIVQQPTQMGYEAISLLNQYSQGQDVTSKQYTPISVITDKEV 324 >UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY2_9FIRM Length = 324 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 10/267 (3%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + A+V K+ + FW + G E A + + I +E D+++Q ++ + + Sbjct: 35 KVALVAKSTNTDFWKAVFVGAEAAATEYNMDLTIDGPETEEDYETQNRMIAEAVENGAQA 94 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + F+ + + A KG+ +V +D ++ + +V ++ TDN + G A Sbjct: 95 LVFSAIDFDANAPAIEEAADKGVKIVVIDSAVNTE-------DVATYIGTDNYSAGQMAA 147 Query: 146 SFIIDKLGAEGG-EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 + G EG +V I+ +A+G+ R GA + F ++ + ++VA+ + A Sbjct: 148 EAALQ--GTEGTLKVGIVNYDVNSANGQDRERGAVDTFAESGRAEIVATIHTLAEASSAQ 205 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + +LQ +P I A+ N+ ++G AQAV + +V D ++ G + Sbjct: 206 EDTRKMLQDHPEINALLAFNEPTSVGAAQAVEELHLQNALWMVAFDSNLVTIDALQTGVV 265 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGK 291 A V QN ++G G++ + Sbjct: 266 DALVIQNTYEMGYFGVQSAYKLLSGQR 292 >UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI family n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQF4_AGRRK Length = 337 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 14/307 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA-----EYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 M K + T++ L+ + A A + A ++++L+ + V + Sbjct: 3 MTKRALLGATTVLCLLGTALTGAPAYAKTFKIAAIVQSLNTEYNVLWADAAKSHPALADG 62 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + + D +Q LF+ + Y I F P+ P+ RA GI + + Sbjct: 63 TATLTVLDGRQDVLTQSNLFDTAITEKYDAIIFIPVDIDAGNEPIERAKAAGIPVFGSNT 122 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 + L +A++ +++V G A +IDK G + +V ++EG G ++ R Sbjct: 123 VVSKTEL------YDAYINSNDVEAGEMLAKAVIDKAGKD-AKVVVLEGMLGQSAQVQRL 175 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQA 234 G K+ S + ++ A+W R +A+ + N L + + ++ + ND MA+G + Sbjct: 176 EGINNVLKQNSGVTILEQNTANWSRAEAITLMENFLTSHGDQVQGVLAENDEMAVGAIEG 235 Query: 235 VANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 + N G K+ V G DGI +A + V+ G+ T ++ Q+ + + L + Sbjct: 236 IRNHGLDPKKLPVAGVDGIKDALEAVKRGEQTMSILQDASGQSQGAIDLALSKLVGDTYK 295 Query: 294 PLDKAPE 300 P K + Sbjct: 296 PRAKVWD 302 >UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW4_9BACT Length = 935 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 13/292 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M + L + ++L+ A ++ + + S W D + L S+ + Sbjct: 1 MKRKLHLIIYVAIIVLLTGCAQKPRKFVIGVSQCSEDIWRDKLNDELKMGEYLNDSLIVK 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + S D Q + ++ + +P + V RA+ KGI ++ D K + D Sbjct: 61 LASSNDDNVLQNKQVNQFIDEGVDLLIVSPNQLSAISKSVERAYDKGIPVILYDRKTNSD 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 AF+ DN +G +FI +L +G + I G G++ R G + Sbjct: 121 -------KYTAFIGCDNYTIGKSMGTFIAQQLQGKG-RIVEISGLEGSSPALERHRGFMD 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K +++VAS+ +W + +L++ + ++ ND +A G A Sbjct: 173 AIKPYPGLQVVASEEGNWKEEGGIQAMKRILKQTQDFDYVFAHNDCLAWGAYVAARQMRV 232 Query: 241 TGKVLVVGTDGIPE---ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G DG+ ++V G A+ G + L + K Sbjct: 233 KRNYKYTGVDGMATEGGGLELVRDGIFEASYLYPTK--GDEVIALAMKILKH 282 >UniRef50_A9KMR5 Putative solute-binding component of ABC transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR5_CLOPH Length = 334 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 134/335 (40%), Gaps = 38/335 (11%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF---------AAAEYAVVLKTLSNPFWVDMKKGIEDEAK 51 M K L ++ L+ V++K L N +W ++ G E K Sbjct: 1 MKKLLSMMLALVMVFSLTACGSTNKSKDSSEGEKTIYVIVKVLGNQYWSVVQAGAEKAGK 60 Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 LG V I + +E D + Q++ +D + I APL L P++ +K G +V Sbjct: 61 DLGCKVVIVGTAAESDIEGQVRYIQDAISAKADAIVVAPLDRTALKNPISEQFKSGTPIV 120 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG------GEVAIIEGK 165 +D ++ ++ A + TDNV G A +I +L A+G G +AI G Sbjct: 121 LIDSSVEGEDYSTA-------LMTDNVEAGRMAAKEMIARLKAKGVAEDKEGTIAIQAGS 173 Query: 166 AGNASGEARRNGATEAFKK---------ASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 G+ + R G E + + IK+ D D KA+ + L N Sbjct: 174 TGSMAINDRLKGFNEYWGENAPASWKVLNDDIKI-----NDGDISKAVAFCQDFLTTYTN 228 Query: 217 IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT-ATVAQNPADI 275 + ++ N+ +G + A +T + ++G D E +M+ G+ A++ Q + Sbjct: 229 LIGVFGPNNGSTVGFVTGLTEAKRT-DLTMIGFDFSNEIEQMIRGGEYDVASMVQRQYMM 287 Query: 276 GATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 G G+K ++ GKV +VD+ V Sbjct: 288 GYDGVKTALELANGGKVENKIVDTGVLVVDNKNVD 322 >UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P063_9CLOT Length = 326 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 113/285 (39%), Gaps = 12/285 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 + T++N F+ + I + + G + D + Q + + L + I Sbjct: 47 FGATYMTMNNEFYKIVNNQIRMQVEKNGDQMITLDPA--LDQKKQNEQIKQLVKRKVDAI 104 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+ + + A K I ++ +D ++ +L V + +DN G A Sbjct: 105 FLNPVDWKAVEPGLVAAKKAKIPVIVIDSQVYRSDL------VAMTIVSDNYKAGVLCAK 158 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 ++ + + + ++ A S R NG + K K++AS +AL Sbjct: 159 EMMKQ--KDQANIVLLTHNA-ARSAVDRINGFLDTIKNNKNYKILASADTQGQIERALPK 215 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 +++ NI + ND AMG A+ + G VLV G DG PE +K+++ G MT Sbjct: 216 VDKIIEEYQNIDVVMGLNDPAAMGALAALDSKGAREGVLVYGIDGSPEGKKLIKEGMMTG 275 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 T AQ+P + T + + KV K +++ V Q Sbjct: 276 TAAQSPKQMADTAVNAAYQILQGEKVE-KKKVISVQMITKKNVEQ 319 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 14/281 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + + NP+++ ++ I++E G + ++ + D Q +++ ++ Sbjct: 62 KIGFSGIDMENPYFLTLESAIKEEVD--GKNCELIVKDPKTDPDMQASQIQEMIDEGINA 119 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I +P+ + + + + +VN+D ++ + V+A++ +DN G Sbjct: 120 IILSPVDWEKITPSLEALKEADVKIVNVDTQVKEMDY------VDAYIGSDNYNAGVLCG 173 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ-IKLVASQPADWDRIKAL 204 +I + +GG+VAI+E S R G E KA ++VA + + K+L Sbjct: 174 EDLIKRC-PDGGKVAILEC-PTQNSVNERITGFEETLAKAENGFEIVAREDTSGEFQKSL 231 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE--AG 262 + A +L N +I AI C ND MA+G A+ N + G++L+ G DG P+ +K ++ Sbjct: 232 EAAQKILSENSDIVAIMCGNDQMAVGAKTAM-NVAEQGQILIYGVDGSPDIKKELKKTEN 290 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 Q+ TVAQ+P +G +++ K F + Sbjct: 291 QIAGTVAQSPISMGKDAANTVLNILNGKDYEKEIKENVFMI 331 >UniRef50_UPI0001973330 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973330 Length = 325 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 8/258 (3%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + A+++K+ + F+ + G A VS+ SE D+ +Q ++ Sbjct: 37 QVAMIVKSTESAFFQSVFAGAGAAATEYNVSLITEGPESEEDYATQNEMIYKAVENGADA 96 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + + + V A KGI +V +D ++ +K + TDN G A Sbjct: 97 LVISAVDFNKNAEAVDWAAAKGIPVVVIDSDVNSSAVKFR-------IGTDNEEAGRMAA 149 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 +D E + I+ A+G+ R G E KK S++K + + Sbjct: 150 RAALDGTDGE-LFIGIVNFDENTANGQQREQGFREEAKKDSRVKEIVTINVPSAIDDTRA 208 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 +L +P I I N+ ++GV A+ + K + VV D + M+E G++ Sbjct: 209 ATKGLLSTHPEINVITTFNEWTSLGVGWAIRDLNKKDDISVVAFDSNAVSVGMLETGEVD 268 Query: 266 ATVAQNPADIGATGLKLM 283 A + QNP +G G++ Sbjct: 269 ALIVQNPYAMGYLGVEKA 286 >UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KM03_RHISN Length = 312 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 125/313 (39%), Gaps = 14/313 (4%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 +K + L+ S+ A + V + + ++ F M + ++DEA + + + + Sbjct: 1 MKRMIIGTTAMFLAASSAYAGDIGVTIAS-NDTFLAVMVQAMKDEAAKTNQPLQVEFADA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 D QL ++ I + S A GI LV ++ + Sbjct: 60 --DVNKQLSQIQNFIAAKVDAIIVNVVESTATPTITKMAADAGIPLVYVNNTPSDLDQL- 116 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGE----VAIIEGKAGNASGEARRNGATE 180 G AF+ + + G A + L EG + II+G + E R + Sbjct: 117 --GPKAAFIGSQEIDAGTLQAKEVCRVLKEEGKTEDAGILIIQGVLAQHAAEQRSKAVHD 174 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + + +K++ Q A WD +KA D+ TN + A+ ND MA+G ++ A Sbjct: 175 VVATPECNFMKIIDEQTAQWDPVKAQDLMTNWITAGHKPVAVLSNNDDMALGAVNSLKAA 234 Query: 239 G-KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G + V+V G D EA V+ G + ATV Q+ GA + + K KV Sbjct: 235 GWEMKDVIVAGIDATKEAMHYVKTGDLDATVFQDAVGQGAGSVDAAIKLAKGEKVESPVW 294 Query: 298 APEFKLVDSILVT 310 P F+LV++ V Sbjct: 295 IP-FELVNAANVD 306 >UniRef50_C5ET05 D-ribose-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET05_9FIRM Length = 336 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 17/284 (5%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 AV+ + + F VD+ G E +A LG +V + GD Q ++ Sbjct: 43 AAAAQGEGKDGYTIAVLAWSQAEEFGVDIISGAEKKAAELG-NVTVVKPDPAGDMQKEIA 101 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + EDL + I AP+ + +V + + + GI LV+ D + +A V Sbjct: 102 ILEDLIQQGVDAICVAPVDANAIVPYIDKVREAGIVLVDYDIDTE--------AQCDAKV 153 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVA 192 +DN A GA A +++ ++G EG +V I+ G + E R G + + A +++V Sbjct: 154 LSDNAAGGAMAADYLVQEMGTEG-KVLILTEVPGVTTAEERIAGFKDRMAEIAPNVEMV- 211 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 Q ++ R N+LQ +P+I I+C ++G A + VL+ G D Sbjct: 212 EQLSNGTRDTHRATTENMLQAHPDITGIFCFMGDNSLGAYTACKTNNRQ-DVLIAGYDAT 270 Query: 253 PEARKMVEAG----QMTATVAQNPADIGATGLKLMVDAEKSGKV 292 PE +++ + +VA P IG L+ + + ++ Sbjct: 271 PEQLDIMKNDGPDCNLICSVALYPKKIGYVALETAYNILEGEEI 314 >UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-binding protein n=3 Tax=Bacteria RepID=C3RLD7_9MOLU Length = 321 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 119/304 (39%), Gaps = 19/304 (6%) Query: 3 KYLKYFSGTLVGLMLST-------SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 K + + + ++ + + T++NPF+ + I+ + G Sbjct: 12 KMMVFLCLCITLMIFGFYSYPDFKATVGQQRFGATYMTMNNPFFEVINNEIKKAVEANGD 71 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + D Q + DL ++ I P+ + + + + A K I ++ +D Sbjct: 72 VLITLDPI--LDVDKQNEQILDLIDQRVDAIFVNPIDAKKIEIGLKAAKKAKIPVIVVDA 129 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 I ++L V + ++N G A ++ K + ++ ++E A S R Sbjct: 130 PIYDESL------VNCSIASNNYDAGVLCAKDMMSK--RDHAKIILLEH-ATAKSAVERI 180 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G + + +++ D A+ +L+ P++ + ND A+G A+ Sbjct: 181 QGFLDTIASNANYQVINRADCDGQIEIAMPTMKQMLKETPDVDVVMALNDRSALGALAAI 240 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 + + VLV G DG P+ ++++ G + AT AQ+P +G + ++ K+ Sbjct: 241 ESM-EIDNVLVYGVDGSPDVKELINTGLIQATAAQSPVKMGQLAYQKAKALLENKKIEKK 299 Query: 296 DKAP 299 + P Sbjct: 300 IEVP 303 >UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protein n=23 Tax=Yersinia RepID=A4TI53_YERPP Length = 319 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 130/319 (40%), Gaps = 21/319 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L V + +S SA + +TL+ F+ + + ++ AK G ++ Sbjct: 1 MKKRLIGLLLAGVTISMSVSAAEPLKIGFANRTLNGAFFNGLTEYMKIHAKEKGYTL--I 58 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + GD Q+ ED+ ++ + P + A + G+ V LD I ++ Sbjct: 59 TTDARGDLNKQIADVEDMLSQGINYLILNPQDPQAGLRITEIAKRAGVPTVILDSDIALE 118 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 V V +N + + + G + + G GN G+ARR+ Sbjct: 119 ------APVITRVQANNAKNNNLIGEYAVGQFGDKPMNCIFLSGNQGNLVGQARRDNFLL 172 Query: 181 AFKKA-------SQIKLVASQPADWDRIKALDVATNVL-QRNPNIKAIYCANDTMAMGVA 232 +A + + ++ +WD+ L +++ + I +Y D MA+G Sbjct: 173 GVAEAQLRKYNRTNVNFLSQGWGNWDQQGGLKAMEDIIVAQGDKINCVYSEMDDMALGAI 232 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 +A+ A K V V DG + + V+ G++ AT + NP + +T L+++ + Sbjct: 233 RALKAANKLDNVKVYAHDGYKKGLEAVKKGELQATASNNPDLLTSTVLEVIGQYQAGQTS 292 Query: 293 IPLDKAPEFKLVDSILVTQ 311 P ++ + SIL+T+ Sbjct: 293 FP-----DYVYIPSILITK 306 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 18/309 (5%) Query: 6 KYFSGTLVGLMLSTSAFA--AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 + S L G ++ A + V + +NPF+ K E K++G V + Sbjct: 20 VFGSIGLTGCATASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGAEV--LSQV 77 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 + D Q+Q + K I + + V RA GI ++ +D + Sbjct: 78 ANEDVQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDNQ------- 130 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 N +TTDN G + DKLG +G ++AI+ G ++ + R G Sbjct: 131 --SKNATVNITTDNKQAGEISCRSLADKLGGKG-KIAILNGTP-VSAVDDRVTGCKGILG 186 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 + IK+VA Q + R AL +AT++L NP++ + ND A+GV A G + Sbjct: 187 QYPDIKIVADQRGENSRDSALPIATDILTANPDLDGFFAINDPSAVGVQLAAEQKGAS-- 244 Query: 244 VLVVGTDGIPEARKMVEA-GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 V++ DG A + A G +TAT AQ+PA + + L + + + Sbjct: 245 VVITSVDGASSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKEPDQKVILVPTE 304 Query: 303 LVDSILVTQ 311 LVD+ V + Sbjct: 305 LVDASNVAK 313 >UniRef50_A4FMX8 Ribose ABC transporter binding protein n=2 Tax=Pseudonocardineae RepID=A4FMX8_SACEN Length = 323 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 17/302 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAA----------AEYAVVLKTLSNPFWVDMKKGIEDEA 50 M +++ + L+ + A++ PF+V M+ + +A Sbjct: 1 MRRHILAVASVLLLAGCGSGQIGDTGGGQTDPNNRNLALLTGMRGEPFYVSMECAAKQQA 60 Query: 51 KTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYL 110 G +++ +P + + Q Q+ + + AP L P+ +A G+ + Sbjct: 61 AAAGYNINAQ-APEKFEQAEQSQMLTGIIGTRPGAVIIAPTDDKALAAPLQQAKNNGVQV 119 Query: 111 VNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNAS 170 V +D ++ ++ A +++DN A G A + G + G V + KAG ++ Sbjct: 120 VEVDTALEDRSI------AVASLSSDNYAGGKLAAQTLAQLTGGKPGAVLALNTKAGTST 173 Query: 171 GEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMG 230 + R G E K ++L+ +Q + + A + + L NP++ ++ N G Sbjct: 174 TDERAKGFEEEIAKHPNLRLLPTQYTENEPATAAQIVSATLAANPDLVGVFATNLNTGEG 233 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 A+ANAG++G+V +VG D P+ + + G++ A +AQ+PA IG G+ + A K Sbjct: 234 AGTALANAGRSGQVQLVGFDASPKQVEDLRNGRVQALIAQDPAAIGREGVDRAIAAIKGQ 293 Query: 291 KV 292 V Sbjct: 294 PV 295 >UniRef50_A8FI27 Sugar ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacillus pumilus RepID=A8FI27_BACP2 Length = 334 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 9/285 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 S+ + +V + L N +W ++KG D A V ++ + P + D L+ + Sbjct: 41 ASSAYQYHFVLVPEELDNEYWQLVQKGAADAAAAHRVYLE-YLGPKQADIDDHLKTIDMA 99 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + GI L + +A +KGI +V +D + G + +V TDN Sbjct: 100 IAGHVDGIMTQGLDAKKYKPLFQKAREKGIDVVTVDTDAE-------GSKRQVYVGTDNY 152 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G +I E V I+ G+ + R G +A +I + + + Sbjct: 153 YSGFIAGQALIADTKGEQ-YVGIVTGRLDAVHQKQRVKGFRDAVAAEKRIHIAGIEESAI 211 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 + A A +L + N+ A Y + +G+ QA + T + V+ D +P+ + Sbjct: 212 TKSGASGAAYKLLNDHANLTAFYGTSALDGVGIIQATSQYQSTTDIYVLAFDTLPDTIQA 271 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 ++ G++ A V Q+P ++G ++ +V +K K PL + Sbjct: 272 LDDGEIDAVVVQHPYEMGYQAVESLVRLQKGEKEEPLQYTGTSVI 316 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 321 3e-86 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 300 3e-80 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 295 1e-78 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 294 3e-78 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 287 4e-76 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 286 6e-76 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 286 8e-76 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 283 7e-75 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 282 1e-74 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 281 2e-74 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 279 1e-73 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 277 3e-73 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 276 6e-73 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 276 7e-73 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 276 1e-72 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 275 1e-72 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 275 1e-72 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 275 1e-72 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 275 2e-72 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 273 6e-72 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 271 3e-71 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 268 2e-70 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 268 2e-70 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 268 2e-70 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 264 2e-69 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 264 3e-69 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 264 3e-69 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 264 4e-69 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 263 4e-69 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 263 5e-69 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 263 5e-69 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 263 5e-69 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 263 6e-69 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 262 9e-69 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 262 1e-68 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 260 4e-68 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 260 5e-68 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 260 5e-68 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 259 6e-68 UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding... 259 8e-68 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 259 1e-67 UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic com... 258 2e-67 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 258 2e-67 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 257 3e-67 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 257 3e-67 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 257 4e-67 UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Str... 256 5e-67 UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional... 256 5e-67 UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 256 7e-67 UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=... 256 9e-67 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 256 1e-66 UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpe... 255 1e-66 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 255 1e-66 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 254 3e-66 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 254 3e-66 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 253 5e-66 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 253 9e-66 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 252 1e-65 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 252 1e-65 UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Pr... 251 3e-65 UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clo... 251 3e-65 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 250 4e-65 UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional... 250 4e-65 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 249 7e-65 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 249 8e-65 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 249 8e-65 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 249 9e-65 UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Ga... 248 1e-64 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 248 2e-64 UniRef50_UPI000185D1D6 putative DNA-binding response regulator/s... 248 2e-64 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 248 2e-64 UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerot... 248 2e-64 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 248 2e-64 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 248 3e-64 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 248 3e-64 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 247 3e-64 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 246 6e-64 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 246 6e-64 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 246 1e-63 UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3... 246 1e-63 UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-bindi... 245 1e-63 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 245 2e-63 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 245 2e-63 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 244 2e-63 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 244 2e-63 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 244 3e-63 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 244 4e-63 UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostri... 243 4e-63 UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea D... 243 5e-63 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 243 6e-63 UniRef50_A1STY3 Transcriptional regulator, periplasmic binding p... 243 8e-63 UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Paste... 243 9e-63 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 242 1e-62 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 242 1e-62 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 241 2e-62 UniRef50_D2QME7 Two component transcriptional regulator, AraC fa... 241 2e-62 UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein ... 241 2e-62 UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional... 241 2e-62 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 241 2e-62 UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional... 241 3e-62 UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Prot... 241 4e-62 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 240 4e-62 UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacte... 240 5e-62 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 240 5e-62 UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding... 240 6e-62 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 239 7e-62 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 239 7e-62 UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding pro... 239 1e-61 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 239 1e-61 UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HL... 238 2e-61 UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Ta... 238 2e-61 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 238 2e-61 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 238 3e-61 UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional... 237 3e-61 UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional... 237 3e-61 UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding... 237 3e-61 UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasm... 237 3e-61 UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostri... 237 4e-61 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 237 4e-61 UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional... 237 4e-61 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 237 5e-61 UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Rei... 237 5e-61 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 236 6e-61 UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostri... 236 7e-61 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 236 9e-61 UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Di... 236 9e-61 UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostri... 236 1e-60 UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor h... 236 1e-60 UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic suga... 235 1e-60 UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 1820... 235 1e-60 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 234 2e-60 UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 234 3e-60 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 234 3e-60 UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostri... 234 3e-60 UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional... 234 3e-60 UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transc... 234 4e-60 UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepI... 233 5e-60 UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional... 233 6e-60 UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional... 233 7e-60 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 233 7e-60 UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding prot... 233 8e-60 UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional... 233 8e-60 UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 232 1e-59 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 232 1e-59 UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia... 232 2e-59 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 231 2e-59 UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional... 231 2e-59 UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding... 231 2e-59 UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional... 231 2e-59 UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Ba... 231 3e-59 UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesor... 231 3e-59 UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional... 231 3e-59 UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional... 230 4e-59 UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sora... 230 5e-59 UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette tran... 230 5e-59 UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional... 230 6e-59 UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional... 229 8e-59 UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional... 229 8e-59 UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacte... 229 8e-59 UniRef50_B0G4U9 Putative uncharacterized protein n=3 Tax=Clostri... 229 9e-59 UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional... 229 9e-59 UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-... 229 1e-58 UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostri... 229 1e-58 UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional... 229 1e-58 UniRef50_C5ERG9 Periplasmic binding protein/LacI transcriptional... 229 1e-58 UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotro... 229 1e-58 UniRef50_A7V0S7 Sensor protein n=6 Tax=Bacteroides RepID=A7V0S7_... 229 1e-58 UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostri... 228 2e-58 UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding ... 228 2e-58 UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic com... 228 2e-58 UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional... 227 3e-58 UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional... 227 4e-58 UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional... 227 4e-58 UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 227 4e-58 UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional... 227 5e-58 UniRef50_P39325 ABC transporter periplasmic-binding protein ytfQ... 227 5e-58 UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales Rep... 227 5e-58 UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional... 226 7e-58 UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9... 226 7e-58 UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette tran... 226 8e-58 UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protei... 226 9e-58 UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and tra... 226 9e-58 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 226 1e-57 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 226 1e-57 UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminoc... 225 1e-57 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 225 1e-57 UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DS... 225 1e-57 UniRef50_A7II12 Periplasmic binding protein/LacI transcriptional... 225 1e-57 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 225 1e-57 UniRef50_A6DJR9 Periplasmic binding protein/LacI transcriptional... 225 1e-57 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 225 2e-57 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 225 2e-57 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 225 2e-57 UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantel... 224 2e-57 UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional... 224 2e-57 UniRef50_D1QRT0 Putative DNA-binding response regulator/sensor h... 224 2e-57 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 224 3e-57 UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostri... 224 3e-57 UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostri... 224 3e-57 UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthroba... 224 3e-57 UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional... 224 3e-57 UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacte... 224 3e-57 UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasm... 224 4e-57 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 224 4e-57 UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional... 224 4e-57 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 224 4e-57 UniRef50_A3DI69 ABC-type sugar transport system periplasmic comp... 223 7e-57 UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribos... 223 7e-57 UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional... 223 8e-57 UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alph... 223 9e-57 UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI fa... 222 1e-56 UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional... 222 1e-56 UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-bindin... 221 2e-56 UniRef50_A9KMR5 Putative solute-binding component of ABC transpo... 221 2e-56 UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport ... 221 2e-56 UniRef50_A6M1U1 Periplasmic binding protein/LacI transcriptional... 221 2e-56 UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminoc... 221 2e-56 UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding... 221 2e-56 UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curviba... 221 2e-56 UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibac... 221 3e-56 UniRef50_B2JP41 Periplasmic binding protein/LacI transcriptional... 221 3e-56 UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional... 221 3e-56 UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Br... 220 4e-56 UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Ta... 220 5e-56 UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional... 220 5e-56 UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea l... 220 5e-56 UniRef50_B1ZN56 Periplasmic binding protein/LacI transcriptional... 220 5e-56 UniRef50_C5EPY5 ABC-type sugar transport system n=2 Tax=Clostrid... 220 5e-56 UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=... 220 6e-56 UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional... 219 9e-56 UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding... 219 9e-56 UniRef50_C0Z4C9 Putative ABC transporter substrate binding prote... 219 9e-56 UniRef50_B2IIE3 Periplasmic binding protein/LacI transcriptional... 219 1e-55 UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding... 219 1e-55 UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax... 219 1e-55 UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n... 218 2e-55 UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 T... 218 2e-55 UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional... 218 2e-55 UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium ... 218 2e-55 UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaeros... 216 6e-55 UniRef50_A8RSF4 Putative uncharacterized protein n=1 Tax=Clostri... 216 6e-55 UniRef50_C6PN50 Periplasmic binding protein/LacI transcriptional... 216 7e-55 UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcri... 216 7e-55 UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 T... 216 7e-55 UniRef50_B2JDH5 Periplasmic binding protein/LacI transcriptional... 216 7e-55 Sequences not found previously or not previously below threshold: >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF Sbjct: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD Sbjct: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE Sbjct: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK Sbjct: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE Sbjct: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 Query: 301 FKLVDSILVTQ 311 FKLVDSILVTQ Sbjct: 301 FKLVDSILVTQ 311 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 87/281 (30%), Positives = 149/281 (53%), Gaps = 14/281 (4%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + V L TL+NPF+V +++G+E+ A +V+ + ++ D +Q EDL + Sbjct: 48 GDMKIGVSLSTLNNPFFVSIREGVEEAAGKE--NVETVITDAQNDSSTQNNQVEDLITQG 105 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 I P+ S + V +A + I ++ +D D G + +F+ ++NV G Sbjct: 106 VDLIVINPVDSTAIATSVEKANEANIPVICVDRGSDQ-------GELVSFIASNNVEGGK 158 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 +I++K+G EV +EG G +S R G EA +I L+ASQ A++DR + Sbjct: 159 LAGEYILEKVGEN-AEVIQLEGIPGASSTRERGEGFEEA--TNGKINLLASQTANFDRAE 215 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 + V N+LQ +P++KA++C ND MA+G ++A+ +GK V +VG DG +A K VE G Sbjct: 216 GMTVMENLLQAHPDVKAVFCQNDEMALGASEAIKASGK--DVTIVGFDGNEDAIKAVEEG 273 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 ++ATVAQ P ++G ++ + K +V +P + Sbjct: 274 NLSATVAQKPKEMGKLAIETAIKYLKGEEVEETVDSPLELI 314 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 228/311 (73%), Positives = 264/311 (84%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M ++ S + ++ + + +AEYAV+LKTLSNPFWV MK+GIE+EAK LGV VDIF Sbjct: 1 MKRFKTLKSCLAILGLVCSVSVYSAEYAVILKTLSNPFWVAMKEGIENEAKALGVDVDIF 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ASPSEGD+QSQLQLFEDL NKNYKGIAFAPLS NLVMP A+A++KGIYLVNLDEKID+ Sbjct: 61 ASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDIK 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 NL+KA GNVEAF+TTDNVAVG K A FI+DKLG+EGGEVAIIEGKAGNASGEARR GA E Sbjct: 121 NLQKAKGNVEAFITTDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGARE 180 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 F K+S IKLVASQPADWDRIKALDVATNVL RNPN+KA Y ANDTMAMGVAQAV NAGK Sbjct: 181 VFVKSSSIKLVASQPADWDRIKALDVATNVLSRNPNLKAFYVANDTMAMGVAQAVINAGK 240 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 GK+LVVGTDG+PEARKMV ++TAT+AQ+PA IGA GLKL+VDA ++GK IP+D P+ Sbjct: 241 QGKILVVGTDGVPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGKQIPVDVEPK 300 Query: 301 FKLVDSILVTQ 311 + VDSIL++Q Sbjct: 301 IETVDSILISQ 311 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 152/319 (47%), Gaps = 31/319 (9%) Query: 1 MNKYLKYFSGTLVGLML--------------------STSAFAAAEYAVVLKTLSNPFWV 40 M ++ + +V + T++ + + TL+NPF+V Sbjct: 1 MKRWTAMLAVGVVAAGVLAGCGTSVSTGSQKTNLSNTGTASTKPIKLGFAVSTLNNPFFV 60 Query: 41 DMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPV 100 M G+++EAK LGV V I D +QL EDL ++ I P S +L V Sbjct: 61 AMSNGVQEEAKKLGVQVTIL--NGNNDPATQLNQVEDLIQQHVNAIILNPTDSQSLSTAV 118 Query: 101 ARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVA 160 +A + I ++ LD + GNV F+ +++V G A +I LG +G +V Sbjct: 119 EQANRAHIPVITLDRSV-------TKGNVACFIASNSVEAGKMAADELIKALGGKG-QVV 170 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 ++G G ++ R G E KA I++VA Q A++DR +AL+V N+LQ +PNI+ + Sbjct: 171 ELQGVIGTSAEADREKGFDEEIGKAPGIRVVARQTANFDRSQALNVMQNILQAHPNIQGV 230 Query: 221 YCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 + ND MA+G +A+ AGK + +VG DG EA V G + A +AQ P G G+ Sbjct: 231 FAQNDEMALGALKAIQEAGKHN-IKIVGIDGEKEAVNDVHKGLLYADIAQQPVQEGILGV 289 Query: 281 KLMVDAEKSGKVIPLDKAP 299 + V + KV +P Sbjct: 290 EYAVKLVEGEKVPKQVNSP 308 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 188/331 (56%), Positives = 232/331 (70%), Gaps = 21/331 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFA--------------------AAEYAVVLKTLSNPFWV 40 M +K F + L++S AE A+VLKTLSNPFWV Sbjct: 1 MKNIMKIFLLLTMFLLVSCGGAKEEAKTEDGNEPAKTEQKAEGQAEIAIVLKTLSNPFWV 60 Query: 41 DMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPV 100 +MK+GIE EA G+ VDI A+ SE D Q QL+L E+L +K YK I APLS VN + + Sbjct: 61 EMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYKAIGIAPLSPVNTIPAI 120 Query: 101 ARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVA 160 A KKGIY+VN+DEK+DM+ LKK+GG+V AFVTTDNV VGAKGA +II KL EGGEVA Sbjct: 121 VEANKKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAKGAEYIIGKL-PEGGEVA 179 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 IIEGK+GNASGE RR GATEAFK S+ KLVASQPADWDR KALDVA N++Q+ PN+KAI Sbjct: 180 IIEGKSGNASGEFRRQGATEAFKADSKFKLVASQPADWDRSKALDVAANLIQKYPNLKAI 239 Query: 221 YCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 Y NDTMA+G QAVANAGKTG++LVVGTDG PEAR ++ G++ ATVAQ+PA IGAT L Sbjct: 240 YACNDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSIDEGKLNATVAQDPAMIGATSL 299 Query: 281 KLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 K++++A K I D + V+S L+++ Sbjct: 300 KILIEAIKDKPQISPDIEAKEVPVESNLISK 330 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 27/312 (8%) Query: 1 MNK----YLKYFSGTLVGLMLSTSAFAAA---------EYAVVLKTLSNPFWVDMKKGIE 47 M K L L L +A + + TL+NPF+V +KKGIE Sbjct: 1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIE 60 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 EAK G+ V I ++ D Q EDL + + P S + V A G Sbjct: 61 KEAKKRGMKVIIV--DAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVG 118 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 + +V +D + G VE V +DNV G A+FI DKLG +G +VA +EG G Sbjct: 119 VPVVTIDRSAEQ-------GKVETLVASDNVKGGEMAAAFIADKLG-KGAKVAELEGVPG 170 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 ++ R +G + ++++V Q AD+DR K L V N+LQ +P+I+A++ ND M Sbjct: 171 ASATRERGSGFHNIADQ--KLQVVTKQSADFDRTKGLTVMENLLQGHPDIQAVFAHNDEM 228 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 A+G +A+ ++GK +LV+G DG +A ++ +++ATVAQ P IG + D Sbjct: 229 ALGALEAINSSGK--DILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDIL 286 Query: 288 KSGKVIPLDKAP 299 KV AP Sbjct: 287 HGKKVQKTISAP 298 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 104/312 (33%), Positives = 156/312 (50%), Gaps = 28/312 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA-------------EYAVVLKTLSNPFWVDMKKGIE 47 M K L F+ L L LS + + + + TL NPF+V +K G+ Sbjct: 1 MKKTLTVFTA-LALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVV 59 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 EAK G+ V + ++ D Q EDL + + P S + V A G Sbjct: 60 KEAKKQGIEVIVV--DAQDDSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLG 117 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I +V LD + G VE V +DNV G A FI+++LG +G +VA +EG G Sbjct: 118 IPVVTLDRSAE-------NGKVETLVASDNVKGGQMAADFIVEQLG-KGAKVAELEGVPG 169 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 ++ R +G + ++ ++A Q AD+DR K L+V N+LQ NP+I+A++ ND M Sbjct: 170 ASATRERGSGFHKTADD--KLNVIAKQTADFDRTKGLNVMENLLQGNPDIQAVFAHNDEM 227 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 A+G +A+ ++GK ++LVVG DG +A K V+AG M+AT+AQ P IG ++ D Sbjct: 228 ALGAIEAIRSSGK--EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDIL 285 Query: 288 KSGKVIPLDKAP 299 KV AP Sbjct: 286 NGKKVEKTIPAP 297 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 81/292 (27%), Positives = 145/292 (49%), Gaps = 16/292 (5%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 + + + T +NPF+VD+K G++ A G+ + + + ++ D Q++ E+L Sbjct: 61 GSGKKYVIGLAMNTQTNPFFVDVKDGVQKAADEHGIEL--YITDAQDDPTIQMKDVENLI 118 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 K I S +V + + GI + +D + + GG V + + D + Sbjct: 119 TKKPDAIIIDTCDSDAIVSSIEACNEAGIPVFTMDREAN-------GGEVISHIGYDAIK 171 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 G +++D LG +G ++ I+G G + R G E K +++VA Q AD+D Sbjct: 172 SGRMAGQYLVDTLGGKG-KIVEIQGIMGTNVAQNRSQGFNEVMKDNPDMEIVACQVADFD 230 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R K + V N+LQ NP I +Y AND M +G +A+ AG+T +++ +G D I + + Sbjct: 231 RAKGMSVMENILQANPEIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAM 290 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +AG++ AT+A+ P +G L D + +V P + ++D+ LVTQ Sbjct: 291 KAGKVDATIAEPPFFLGKAILNTAYDYLEGKQVEP------YVILDNQLVTQ 336 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 158/304 (51%), Gaps = 13/304 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S L+ +S A A A+V+ TL+NPF+V MK G E AK LG ++ + Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIVL 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +L EDL+ + K I P S + + A + I ++ LD Sbjct: 61 --DSQNDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGAS-- 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 G+V + + +DNV G +FI++K+G + +V +EG AG ++ R G Sbjct: 117 -----RGDVVSHIASDNVVGGEMAGNFIVEKVGEK-AKVIQLEGIAGTSAARERGEGFMN 170 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K S ++L+ASQPAD+DR K L+V N+L NP+++A++ ND MA+G +A+ +GK Sbjct: 171 AVK-GSHMELLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK 229 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 +V++VG DG + V G++ AT+AQ P IGA G++ K +V P Sbjct: 230 --EVMIVGFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQVEDYIPVPL 287 Query: 301 FKLV 304 + Sbjct: 288 KVVT 291 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 102/314 (32%), Positives = 150/314 (47%), Gaps = 26/314 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE---------------YAVVLKTLSNPFWVDMKKG 45 M+K +K + ++ + E + + T SNPF+V +KKG Sbjct: 1 MSKLMKSLMAGALVFAVAACSKQGPETAQAPDAGTDGGKPAIGLAVSTQSNPFFVTLKKG 60 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 E+EA+ G + + ++ D Q+ EDL K K I P S +V V A Sbjct: 61 AEEEAQKQG--LTLITVDAQDDPAKQIASIEDLIQKKVKVILVNPTDSDAVVGAVKAANA 118 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 GI +V LD ++ GG V + V +DNVA G A ++++K+G +G V +EG Sbjct: 119 AGIPVVTLDRSVN-------GGEVASHVASDNVAGGKMAAEYLLEKIGNQGD-VVELEGI 170 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 G ++ R G + +A +K+V QPAD+DR K L V N+LQ N N+K ++ ND Sbjct: 171 PGASAARERGQGFHDVIDQAKDVKVVGRQPADFDRAKGLSVMENILQANKNVKGVFAHND 230 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 MA+G QA+ AG V VVG D +A V+AG+M+ATVAQ P IG T + Sbjct: 231 EMALGAVQALEAAGMK-DVTVVGFDATDDAVNAVKAGKMSATVAQKPKLIGKTAVDAAKK 289 Query: 286 AEKSGKVIPLDKAP 299 V P Sbjct: 290 IIDGQPVDKSLPVP 303 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 11/295 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG-VSVDIFASPSEGDFQSQLQLFED 77 S+ ++ + W+ +K G E +AK LG V + A + D Q+++ ED Sbjct: 43 ASSEKKYNIVLITMDSMDEHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMED 102 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 N+ I AP L V +A+ GI ++ +D + D +FV TDN Sbjct: 103 AINQKADAILIAPTDQTALTPVVEKAFDAGIPVILIDSPVKTD-------KYVSFVATDN 155 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPA 196 + A + + LG +G ++AII + G+ + R NG + K K I+++ +Q + Sbjct: 156 IKAAEMAADKLGELLGGKG-KIAIISAQPGSGTTIMRENGFKDRLKEKYPDIQIITTQYS 214 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 D+ +AL+ A ++L +P++ Y N+ +G+A A+ GKV VVG D Sbjct: 215 MGDKNRALNQALDILTAHPDLAGFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQATI 274 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ + A++ QNP +G G+++ VD + +V P ++ V + Sbjct: 275 NAIKENYIQASMVQNPYMMGYKGVEIAVDKLQGKEV-PKRVDTGVTVMTKDNVDE 328 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 134/322 (41%), Gaps = 22/322 (6%) Query: 1 MNKYLKYFSGTLVGLML-------------STSAFAAAEYAVVLKTLSNPFWVDMKKGIE 47 M K L + L S ++ + +V K + FW ++ G + Sbjct: 1 MKKLLLFLVVFAAVLSCGKSEDKKDAGAGKSANSGDKIKIELVSKGYQHEFWRSVEAGAK 60 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 + LGV V+ E + Q+ + E+ NK + A L L + +A Sbjct: 61 KAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGIAALDPDALAVVAKKAMDAK 120 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I +V D + D +F+ TDN GA + + +G +VAI+ G Sbjct: 121 IPVVTFDSNVKGDITS-------SFIATDNKVAGAMAGEQLAKLINGKG-KVAIVSHNPG 172 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 + R G EA K IK++ +Q +D D+ KAL + +++ NP+I IY N+ Sbjct: 173 TTTAIEREAGFREALAKYPDIKILNTQFSDGDKSKALAITLDIINANPDIAGIYGTNEPS 232 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 G+A+ V G TGKV++VG D + K +E G ++ V Q+P ++G ++ + Sbjct: 233 IFGIAKGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLVIQDPYNMGYQTVQQLYKLS 292 Query: 288 KSGKVIPLDKAPEFKLVDSILV 309 K KV LV + Sbjct: 293 KGEKVEKR-IDTGAILVTKENI 313 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 276 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 9/298 (3%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 S L + + ++ G+++ + V++ + D QL Sbjct: 46 TAQTSGDKSGKIVIGAALPDFDDKWLSYLQDGMKEY-EKTQKDVEVIYVDAMNDASKQLS 104 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 E+ + I P+ +V+ V +A + I +V ++ D + A+V Sbjct: 105 QVENFIQQKVDAIVLIPVDTVSAPEMVDKANQANIPIVVVNRIFDGVD------KATAYV 158 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 ++++ G + L +G ++AI+ G+ G+ + R G + KK +K+V Sbjct: 159 GSESIKAGIMQMEEVAKLLNGKG-KIAIMNGQMGHEAQIKRTEGNKQVIKKYPDMKVVLE 217 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 A+WDR K + + N LQ I A+ C ND MA+G A+ + GK V+V G D P Sbjct: 218 GTAEWDRAKGMSLMENWLQSGKKIDAVVCNNDEMAIGAIMALEDEGKLDDVIVAGVDATP 277 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +A + V+ G++ TV QN G GL++ + A K KV + P ++LV V + Sbjct: 278 DALEYVKEGKLKVTVFQNAKGQGQLGLEVAIKAAKGEKVEKFNWIP-YELVTKDNVEE 334 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 108/325 (33%), Positives = 158/325 (48%), Gaps = 25/325 (7%) Query: 1 MN-KYLK--YFSGTLVGLMLSTSAFAAAE-----------YAVVLKTLSNPFWVDMKKGI 46 M K L + ++ + +A + AVVLK L++ +W ++ G Sbjct: 1 MKGKRLLGIILTLGMLSCVFGGCGNSADQGKGGEKGKGGNVAVVLKALNSDYWKTVQAGA 60 Query: 47 EDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK 106 D AK LGV V + +E D Q L ED K + APL + +A K+ Sbjct: 61 NDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDALVVAPLQPNAAITTFDKAEKE 120 Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 I +V +D + D K +FV T N+A G G +I KL +G E II G Sbjct: 121 KIPVVLIDTDANWDKKK-------SFVGTGNIAAGKLGGEYISKKLK-KGDEAIIIRGVP 172 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDT 226 G+ + + R GA +A + A IK+V QPA+ +R KA+ V N+LQ +PNIK ++C ND Sbjct: 173 GDRTQDERTQGAQKALEAA-GIKVVEIQPANSEREKAISVMENLLQTHPNIKGVFCTNDE 231 Query: 227 MAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 MA+G +A+ AGK + + G DG P+A K ++ G +T TVAQN DIG G++ V Sbjct: 232 MALGAVKALQQAGKKNIISI-GVDGSPDALKSIKEGGLTGTVAQNSYDIGKKGVETAVKV 290 Query: 287 EKSGKVIPLDKAPEFKLVDSILVTQ 311 + KV LVD V + Sbjct: 291 LRGEKVETR-IDTGTTLVDKQNVNE 314 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 157/303 (51%), Gaps = 13/303 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S L+ +S A A A+VL TL+NPF+V MK G E +AK LG ++ + Sbjct: 3 MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVL 62 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +L EDL+ + K I P S + + A + I ++ LD Sbjct: 63 --DSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGAS-- 118 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 G V + + +DNV G FI K+G++ +V +EG AG ++ R G Sbjct: 119 -----RGEVVSHIASDNVVGGEMAGHFIEAKIGSD-AKVIQLEGIAGTSAARERGEGFMN 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K S+++L+ASQPAD+DR K L+V N+L NP+++A++ ND MA+G +A+ +GK Sbjct: 173 AVK-GSKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK 231 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 + V++VG DG + VE GQ+ ATVAQ P IGA G++ K KV Sbjct: 232 S--VMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVAL 289 Query: 301 FKL 303 + Sbjct: 290 KVI 292 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 140/287 (48%), Gaps = 14/287 (4%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + V L TLSNPF+V ++ GI+D AK ++ S ++ D Q EDL Sbjct: 44 APKDLKVGVSLSTLSNPFFVSVRNGIQDLAKKN--KTNVQVSDAQNDTAKQNSNIEDLIQ 101 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K + P+ S + V A GI ++ +D D GG V V +++ Sbjct: 102 KKVDVLIINPVDSSAITPAVKDANDAGIPVITVDRSSD-------GGKVLTLVASNSTKG 154 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G A ++I+KLG + ++A ++G G ++ R G A K ++ +V+ Q A +DR Sbjct: 155 GQMAAKYMIEKLG-KDAKIAELQGIPGASATRERGKGFDGAAK--GKLDIVSKQTAGFDR 211 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 K L V N+LQ N +I I+ ND MA+G QAV AGK K+ +VG DG + K V+ Sbjct: 212 AKGLTVTENILQGNGDIVGIFSQNDEMALGAVQAVKAAGK--KITIVGFDGEADGIKAVK 269 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 AG M ATVAQ P ++G L+ D V ++P + Sbjct: 270 AGDMAATVAQKPEEMGRLALQAAYDHFNGKTVKKNVESPLSLVTTED 316 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 21/323 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA------EYAVVLKTLSNPFWVDMKKGIEDEAKTLG 54 M K L + L++S + A + A+V+ TL+NP++V + + + A+ LG Sbjct: 4 MKKSLFVVLVLVGLLLVSFTGLAQEQQKPKGKMAIVISTLNNPWFVVLAETAKQRAEQLG 63 Query: 55 VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 114 IF S+ D + F+ + Y I F P + + V RA + GI + +D Sbjct: 64 YEATIF--DSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVD 121 Query: 115 EKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGE-----VAIIEGKAGNA 169 I+ A G A + +DN G + + L + + A + G Sbjct: 122 RGIN------ARGLAVAQIYSDNYYGGVLMGEYFVKFLKEKYPDAKEIPYAELLGILSAQ 175 Query: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 R NG + + K+VA Q A++DR A V +LQ +P IKAI+C ND MA+ Sbjct: 176 PTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQILQAHPEIKAIWCGNDAMAL 235 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEK 288 G +A AG+T + + G DG + ++ G+ + AT+ Q P + ++ + Sbjct: 236 GAMKACEAAGRT-DIYIFGFDGAEDVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLR 294 Query: 289 SGKVIPLDKAPEFKLVDSILVTQ 311 + P +LV + + Sbjct: 295 GERSFPEIVPVTVELVTRENIDK 317 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 36/336 (10%) Query: 1 MNKYLKYFSGTLVGLMLSTS-----------------AFAAAEYAVVLKTLSNPFWVDMK 43 M K K + L L++ ++ + L +LSN F++ M+ Sbjct: 1 MKKTKKILAVLLSTLLIGSAILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGME 60 Query: 44 KGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARA 103 KG++D+ +G + + + GD QL EDL K + L + +V V +A Sbjct: 61 KGVKDKTSEIGCKL--IETNANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVKKA 118 Query: 104 WKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG---GEVA 160 + I ++ LD + +++ F+ TDNV +G + A I+ L +G G V Sbjct: 119 KEANIPIIFLDRGANSEDM-------TTFLETDNVKMGEQAAELILKALKDKGLNGGNVV 171 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 IEG G ++ R G K ++K+VA Q D+++ K+++V N+LQ NP I A+ Sbjct: 172 EIEGLQGTSAARDRGKGFHNVMDKHKEVKIVAKQAGDFNQEKSMNVMQNILQANPKIDAV 231 Query: 221 YCANDTMAMGVAQAV------ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 + ND +G +A+ AG + VVG DGI +A + V+ G + +++Q+P Sbjct: 232 FGHNDDCTVGAEKAIIASNRMKPAGDKEHIFVVGIDGINQAIESVKKGNIDVSISQDPIG 291 Query: 275 IGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 +G +++ + A K +V +F + T Sbjct: 292 MGVQAVEVGLKAIKGEQVEKH-IYTKFFPITKDNAT 326 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 2/290 (0%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 K + FS + L A + A+++KTLSN +++ M++G E+ AK + + + + Sbjct: 7 KNIFKFSALISALPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQVA 66 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 E + + L E++ K I P S+ + +A K GI +++LD ++D Sbjct: 67 EKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKAA 126 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 + AG +V DN G A + + +G +G VAI+EG G +GE R+ GA +AF Sbjct: 127 EAAGLKFN-YVGVDNFNGGYLEAKNLAEAIGKKG-NVAILEGIPGVDNGEQRKGGALKAF 184 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 + IK+VASQ A+W+ +AL V TN+L NPNI I+ AND MA+G AV NAG G Sbjct: 185 AEYPDIKIVASQSANWETEQALTVTTNILTANPNINGIFAANDNMAIGAVTAVENAGLAG 244 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 KVLV G DGIP A + V+ G+M T+ Q P A ++ + ++ Sbjct: 245 KVLVSGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAIAIEHALKQINKQEI 294 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 13/303 (4%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 VG + + +V+ TL+NPF+V +K+G E ++K LG + + S+ Sbjct: 15 ILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVL--DSQ 72 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 D + EDL + P S ++ V A K I ++ +D + + Sbjct: 73 NDPAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQAN------- 125 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG-EVAIIEGKAGNASGEARRNGATEAFKK 184 GG V + + +DN+ G +SFIID+L + +V ++G G ++ R G K Sbjct: 126 GGEVVSHIASDNIKGGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDK 185 Query: 185 ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKV 244 S +KL++SQ A++DR + L V N++Q + A++ ND MA+G A+A+ A K K+ Sbjct: 186 KSNLKLISSQAANFDRAQGLSVMENIIQAQSDFDAVFAHNDEMALGAAKALKTANK--KI 243 Query: 245 LVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 +VVG DG +A+ +E +++ATVAQ PA +G+T ++ V + + + +L+ Sbjct: 244 IVVGFDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVKISNGQNISK-NIPVKLRLI 302 Query: 305 DSI 307 Sbjct: 303 TKN 305 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 18/318 (5%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE----------YAVVLKTLSNPFWVDMKKGIEDEAKT 52 + L+ + A +AV+ K ++ FW +K G E + Sbjct: 110 RRSFCLVSVATLLVCAGCQPPADTSANTGEKELHFAVIPKGTTHIFWQSVKHGAEQAGEE 169 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 +G + E D Q+ + + N GI APL + LV PV A + G+ +V Sbjct: 170 IGAKITFRGPSKENDRDEQINVVQGFLNARVDGILLAPLDADALVRPVKEASRAGVPVVI 229 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 D ++ D G+ ++V TDN G + + LG +GG+V ++ + G+ S Sbjct: 230 FDSGLNTD-----PGDFVSYVATDNFEGGKLAGEAMANALGEKGGDVILLRYEQGSESTH 284 Query: 173 ARRNGATEAFKKASQIKLVAS-QPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMG 230 R G + + S I++++S Q A A+D A +L R + I + A G Sbjct: 285 QREEGFLYSIAEYSNIRVLSSDQYAGTTTESAIDKAQALLNRFGDEADGICTVCEPTAEG 344 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 +A+ GKV +V D R+ + AG++ A V Q+P +G +K M + Sbjct: 345 ALRALRERKLAGKVKLVTFDSSDSLRESLSAGEVNAIVLQDPVAMGYQAVKTMAAHLRGE 404 Query: 291 KVIPLDKAPEFKLVDSIL 308 + + Sbjct: 405 T-PEQFIDTGVFVATAKN 421 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 81/311 (26%), Positives = 136/311 (43%), Gaps = 16/311 (5%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 + + ++G M+ + A + T+++P+ V M +G + A VD+ Sbjct: 9 RTTALAATLVLGAMMPGAVLAQDKIKIGFSQGTMNHPWRVAMVEGNKKYAAEHYPDVDLI 68 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + D Q+ E L + K + +PL+ L V A GI +V LD K++ Sbjct: 69 VTDGNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLDRKVNTP 128 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 V V +N+ +G F+ KL +G + ++G AG ++ R G E Sbjct: 129 --------VTVHVGGENLPLGVGAGEFLAKKLNGKG-NIIELQGTAGASATIDRNKGFAE 179 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRN--PNIKAIYCANDTMAMGVAQAVANA 238 A K +K+VASQ D+ R KA+ +++QR I+A+Y ND MA+G Q + A Sbjct: 180 AIAKHPDMKVVASQNCDYTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLEAA 239 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 G+ +V VVG DG A + V+ G++ AT + G++ K +V P Sbjct: 240 GRLNEVAVVGIDGQETAFEAVKQGKLAATFVYP--FVAPEGIETAYKVAKGEEV-PETIT 296 Query: 299 PEFKLVDSILV 309 V + Sbjct: 297 LPTVSVTPDNI 307 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 5/297 (1%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 ++ + V TL+N + + + G + EA+ GV +++ A +QL Sbjct: 60 SSAEAASGNYGDKTIGFVGMTLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQL 119 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 + E++ GI P SS L + + + GI ++NLD K+ ++L G ++ F Sbjct: 120 GIIENMIANKVDGILLVPSSSDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDI-PF 178 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 T+N ++ +G + AI++G G + R NG E + +VA Sbjct: 179 YGTNNYEGAKLAGEYVAKNF-EKGTKTAILKGIEGQTNAADRYNGFIEGAGDT--VTVVA 235 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 Q A+W+ + A N++ NP+++ +C ND M +G +A+ A ++ ++G D + Sbjct: 236 EQTANWEVDQGYTAAQNIISANPDVELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAV 295 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 EA +VE G+ ATVAQ PA++G G+ M+ G+ +++ V Sbjct: 296 SEALNLVENGEFLATVAQYPAEMGKLGVDNMLKIFDGGEAE-SYIDTGTEVITKDNV 351 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 35/331 (10%) Query: 2 NKYLKYFSGTLVGLMLSTSAF---------------------AAAEYAVVLKTLSNPFWV 40 K F TL L+ + V + T +NP++V Sbjct: 5 KKLTFAFVATLAVSTLTACSLYTGIPGRDGKEKVEEVTHKKPNELNIGVSISTTNNPYFV 64 Query: 41 DMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPV 100 M I+ AK + + S ++ D +QL ++ ++N I P+ S +V + Sbjct: 65 SMNNAIKSMAKEKNTKLTV--SDAQNDSATQLNNVQNFISQNVDAILINPVDSDAIVPAI 122 Query: 101 ARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVA 160 A I ++ +D + GG V V +DNVA G A ++KL + +V Sbjct: 123 KAANNAHIPVIAMDRGSN-------GGTVLTTVASDNVAAGKMAAQA-VEKLVGKNVKVL 174 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 + G G ++ R G K + +++SQ A++DR L+ N+LQ + +++AI Sbjct: 175 ELSGTPGASATIDRGKGFNSE-AKTLGLNILSSQSANFDRTTGLNTTQNMLQSHKDVQAI 233 Query: 221 YCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 + ND MA+G A+AV G+ K+ + G DG E ++AG MTAT+AQ PA IG L Sbjct: 234 FAQNDEMALGAAKAVQATGQ--KIAIFGIDGESETHDAIKAGTMTATIAQQPAKIGEMAL 291 Query: 281 KLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + D + K+ + +P + LVD V Q Sbjct: 292 QATYDYYQGKKIAHMINSPIY-LVDKDNVDQ 321 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 9/303 (2%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 ++ L+ S A A+ V + + + F ++ G+E+ A+ +V + ++GD Sbjct: 6 LFIAVLLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKE--NVQLQFEDAQGD 63 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 Q+ + ++ + P+ + A + + LV ++ D L K Sbjct: 64 VVRQINQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKG-- 121 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 V ++++ G ++ +K+G +G +A+I G S R G + K Sbjct: 122 --VTTVASNDIEAGQLQMRYLAEKMGGKG-TIALIMGDLAQNSTHDRSEGVKQVLKDYPG 178 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK-TGKVLV 246 I +V Q A+W R K +D+ +N L AI ND MA+G A A+ AGK G+V + Sbjct: 179 ITIVEQQTAEWQRNKGMDLTSNWLLAGRTFDAIVANNDEMAIGAAMALQQAGKAKGEVAI 238 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 VG DG+P+ ++ G + A+V Q+P T L+ + K V P F+L+ Sbjct: 239 VGIDGLPDGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPVDAEVWVP-FQLITP 297 Query: 307 ILV 309 V Sbjct: 298 EQV 300 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 149/303 (49%), Gaps = 18/303 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFA-----AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 MN K FS L+ +ML TS + +VL TL+NPF+V+MK G E EA+ LG Sbjct: 1 MNINKKIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGY 60 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + + S+ D + EDL + P S +V V A K I ++ LD Sbjct: 61 DLVVL--DSQNDPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDR 118 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG--EVAIIEGKAGNASGEA 173 + + GG + + + +DN+ G A +++DK E G V I+G G ++ Sbjct: 119 QAN-------GGKITSHIASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRD 171 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQ 233 R G K + ++ Q AD+DR K L V N++Q NPNI+ ++ ND MA+G + Sbjct: 172 RGEGFHNIMDKNDKFNFISIQAADFDRQKGLQVMENIIQANPNIQVVFAHNDEMALGAVK 231 Query: 234 AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 A+ +G LV+G DG +A+ ++A +MTA +AQ P IGA G++L K + Sbjct: 232 AIKASGINA--LVIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESIK 289 Query: 294 PLD 296 Sbjct: 290 NKI 292 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 13/284 (4%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGI 86 + ++ N F V++ +E +AK +GV + +E Q++ E + I Sbjct: 34 IGATMLSMQNEFIVNVSDAMEAKAKEMGVELITV--DAERSALKQVEQVESFIGQGVDAI 91 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P + A I ++N++ + AFV +D+ Sbjct: 92 IMNPAEVEASSPAIKLAMDAKIPIINVNSETSA--------KPTAFVGSDDTESARIAMK 143 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +I +KLG +G + ++ G G A+ R NGA + K +KL+A Q +WDR K + + Sbjct: 144 YIAEKLGGKG-NILMMHGFMGQAAQIKRDNGAKDILKANPGLKLLAEQSGEWDRAKGMSL 202 Query: 207 ATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 N +Q + I AI+ ND M MG +A+ AG GKVLVV D IP+A + V+ G + Sbjct: 203 TENWIQSYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTLD 262 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 ATV QN + G ++ V A K + + F+LVD V Sbjct: 263 ATVFQNAKEQGGKAIETAVKAAK-KEAFEKEVLIPFQLVDKGNV 305 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 13/290 (4%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + ++ N F V++ ++ EA+ G+ + +E Q++ E + Sbjct: 37 KKLVVGATMLSMQNEFIVNVHDEMDKEAQKAGIELITV--DAERSALKQVEQVESFIAQK 94 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 I P VA+A I ++N++ + AFV +D+V Sbjct: 95 VDAIIMNPCEVEASSPAVAKALAAKIPIINVNSE--------TSSKPSAFVGSDDVESAR 146 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 FI DKLG +G V ++ G G A+ R GA E K+ +KL+A Q +WDR K Sbjct: 147 IAMKFIADKLGGKG-NVVMMHGYMGQAAQIKREQGAREILKQYPNLKLLAHQTGEWDRAK 205 Query: 203 ALDVATNVLQRNP-NIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 A+ + N +Q I A++ ND M +G +A+ +AG KV+VV D IP+A + V+ Sbjct: 206 AMSLMENWIQSYGSQINAVFAHNDEMGLGAVKALTDAGLKDKVIVVSIDAIPDALQAVKK 265 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 G + ATV QN GA + + A K P F+LV +++ Sbjct: 266 GSLDATVFQNAEQQGAKAIATAIKAAKGQPFDKETLVP-FQLVTKDNLSK 314 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 7/310 (2%) Query: 1 MN--KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG-VSV 57 M K L + +A +++K+L+N F+ +M G E A+ G + Sbjct: 38 MKLLKNTAAAVTALALSVGMAAAQDQPTVGLIMKSLANEFFQNMMVGAEAHAEERGDYEL 97 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 +E DF+SQ+ E+ + I AP S +V P+ RA + GI ++N D + Sbjct: 98 LAVGMQNETDFESQINAVENFITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVAL 157 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 D +++ G AFV DN + + + LG EGG V IIEG G + RR G Sbjct: 158 DTGAMEQQGIE-LAFVGPDNRMGAEMAGNALGEALG-EGGRVVIIEGNPGADNATQRRLG 215 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 +A ++L+ S+ A W+ +A V +L +P+++ + AND+MA+GV +A+ Sbjct: 216 FEDAIATH-GLELLESRTAHWETEEANQVFAAMLTAHPDLQGVMAANDSMAIGVIEALDA 274 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 AG+ +LVVG D +P M+E G+M ATV Q + A + L ++ ++G + Sbjct: 275 AGR-DDILVVGFDAVPAVLPMIEDGRMLATVDQFGQAMAANAIDLALEVLETGVDLEGWV 333 Query: 298 APEFKLVDSI 307 +LV + Sbjct: 334 RTPIELVTAN 343 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 9/306 (2%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 + G A+++ + F+ M+ G A+ LG +++ P E Sbjct: 28 VFLGGLTTSCGGGGGEGEGYRLALIVGVTGDEFYTTMECGARAAARKLGARLNVQ-GPEE 86 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 +Q + + N I AP +V P+ A + I +V +D I+ + + Sbjct: 87 FSPAAQTPILNAVVQSNPDAILIAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEI--- 143 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA 185 A +++DNV G + +++G +G +V +I K G ++ + R+ G EA K+ Sbjct: 144 ---ALARISSDNVEGGRMAGEALAEQIGGKG-KVLLISVKPGISTTDQRKQGFEEAIKQY 199 Query: 186 SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 I+ + ++ + D +A + T+ LQ +P++ I+ AN G V AGK +V Sbjct: 200 PDIEYLGTEYCNDDPTQAASITTSTLQAHPDLAGIFGANVFSGQGAGTGVRQAGKRDQVS 259 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK-SGKVIPLDKAPEFKLV 304 VV D P + + G + +AQ+P DIG G+++ V + + F V Sbjct: 260 VVAFDASPTQVEDLRRGNLDVLIAQHPNDIGRRGVQIAVRYLESGEEPENKQITTGFTTV 319 Query: 305 DSILVT 310 + Sbjct: 320 TRDNLD 325 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 125/316 (39%), Gaps = 17/316 (5%) Query: 1 MNKYLKYFSGTLVGL-MLSTSA--------FAAAEYAVVLKTLSNPFWVDMKKGIEDEAK 51 M K + +L+ A + + + F + +E+EAK Sbjct: 1 MKKTSRILIIFAATCFLLTACAQKKSIVYKSKKYRIGLSIPASDDVFRNKIINAMENEAK 60 Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 L D+ ++GD Q +L + I P+ ++ A GI ++ Sbjct: 61 NL-PDTDLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIANDSGIPII 119 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASG 171 +++ + + + A+V +D++ G A + + +L +G V I++G+ + + Sbjct: 120 SVNNFLKNQD------DAAAYVGSDSITSGIMEAEYAVKQLNGKG-NVVILKGEPNHETA 172 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 R G + + +IK++ Q DW R + + N ++ AI ND MA+G Sbjct: 173 IKRTEGFKQVLQNYPEIKIIDEQYGDWKRTLGMQITENWIKNGTKFDAILANNDEMAIGA 232 Query: 232 AQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK 291 A+ V V G D P+A K+++ G + TV QN A G+ +K K K Sbjct: 233 IMALKENNLINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYKLVKGEK 292 Query: 292 VIPLDKAPEFKLVDSI 307 + P +V + Sbjct: 293 INKKIFVPYELVVPND 308 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 14/305 (4%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 K S L+ + S SA A A+VL T++NPF+V MK G E +A LG + A Sbjct: 8 KVSVLLSAALLSVSTSFSASAQDAIAIVLSTMNNPFFVTMKDGAEAKAAELGYKL--IAL 65 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 S+ D +L EDL+ + K I P ++ + + A + I ++ LD Sbjct: 66 DSQNDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDRTA----- 120 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 A G++ + + +DN+A G FI +LG + +V +EG AG ++ R G + A Sbjct: 121 --AHGDIVSHIASDNIAGGELAGEFIAQQLG-KNAKVIQLEGIAGTSAARERGEGFSNAV 177 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 +L++SQPAD+DR K L+V N+L N +++A++ ND MA+G +A+ AGK Sbjct: 178 TAN-NFELLSSQPADFDRSKGLNVMENMLAANGDVQAVFAQNDEMALGALRAIEAAGK-- 234 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 +LV+G DG E V Q++ATVAQ P +GAT + K +V+ K Sbjct: 235 DILVIGFDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTADRILKG-QVVEKSIPVALK 293 Query: 303 LVDSI 307 ++ Sbjct: 294 IITQT 298 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 8/308 (2%) Query: 4 YLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 + V + ++A A V + N + + + +++ A+ + V + Sbjct: 12 RTRAVLFATVLCLAGSTALADLRLGVSVGQFDN-YIAYLVRAMQERARQVPGGVTLQVED 70 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 S D QL E + I P + RA + GI LV L+ + ++ Sbjct: 71 SGSDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNSRPEVREFP 130 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 FV TD +G ++ +K+G +G +AI+ G+ + R G + Sbjct: 131 AG----VVFVGTDERRLGQMQMEYLAEKMGGKGD-LAILLGRLAHDDTRKRTAGVKDVLA 185 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 + QI++V Q DW R K LD+ N L A+ ND M +G A A+ AG+ + Sbjct: 186 RYPQIRVVEEQSGDWQRDKGLDLTNNWLSSGREFDAVVANNDEMGIGAAMALRQAGRR-E 244 Query: 244 VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 V V G DG P+ + GQ+ T+ ++P +G + + + + V+ D L Sbjct: 245 VSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVR-KDVVQGDVWIPVHL 303 Query: 304 VDSILVTQ 311 + TQ Sbjct: 304 ITPDNHTQ 311 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 262 bits (671), Expect = 9e-69, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 9/308 (2%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M + L+ ++ ++ + V + + F +++ ++ + K G +V Sbjct: 1 MKLKKLIVTSVLMCMLPASVLAKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDG-NVSGQ 59 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ++GD Q+Q E+ ++ I P+ + + + A I LV ++ + ++ Sbjct: 60 FEDAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPEVT 119 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 A+V +D+ G + + +G V I+ G+ N + R G E Sbjct: 120 LPAG-----MAYVGSDSKLAGKLQMEELAKLMNGKG-NVMILMGELSNEATRDRTRGVEE 173 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 K IK++ Q A W R +A+D+ T+ I AI ND MA+G A+ A K Sbjct: 174 VAAKYPGIKILDKQTAKWGRKEAVDITTDWALTGQQIDAIASNNDEMAIGAILALKQAKK 233 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 +G VLV G DG P+A + ++ G + +V Q+ G ++ + K KV + Sbjct: 234 SG-VLVAGVDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVE-SNVLIP 291 Query: 301 FKLVDSIL 308 ++L+ Sbjct: 292 YQLITKAN 299 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 14/308 (4%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKT--LSNPFWVDMKKGIEDEAKTLGVSVDIF 60 K +K F + + +++ T AFA + +K NPFW +++G ++A LGV + + Sbjct: 2 KLVKLFLASSLAIIIGTLAFAD-TVLLSMKGPGAGNPFWASVERGAREKAAELGVKIVVL 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + P E D QSQ+ ED K IA A L + A GI +V +D K Sbjct: 61 SPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTK---- 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 F+ TDN A A FI D++ + G +VAI++G ++G+AR +GA Sbjct: 117 ----GINKGVTFIGTDNKAGAKMAADFICDRV-SRGSDVAILQGIITQSTGKARADGAHA 171 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 K + +VA QPA+WDR + V N+L RN +KA++ +ND MA+G +A+ +A Sbjct: 172 GLKGC-GLNIVAEQPANWDRAQGRTVMENILTRNQKLKAVFASNDNMALGAVEALKDADM 230 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 V+VVG D P+A K + AG+MTAT+AQ ++GA G++ ++ K + +P Sbjct: 231 LNDVIVVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKG-RSLPPVVDTG 289 Query: 301 FKLVDSIL 308 LV Sbjct: 290 TLLVTKKN 297 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 13/296 (4%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 ++ + ++ F M +G+E +A+ LG + + ++ D Q+Q+ E+ Sbjct: 38 ASKKDGGYTIGCTVYYMT-EFVTLMTEGMEKKAEELGCDLVML--DAQQDAQNQITQIEN 94 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 L + I A + S ++ + GI LV ++ + + +V D+ Sbjct: 95 LIAQKVDVIIVAAVDSDAILPAIEMCDDAGIPLVGVNMLFNTEEPYH-------YVGPDD 147 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPA 196 V G ID++G EG V I+EG G ++ R G K +I ++A Q A Sbjct: 148 VLAGELEMQNAIDEIGGEG-NVVILEGPIGQSAQIQRLEGNQNILDKYEGKINVLADQTA 206 Query: 197 DWDRIKALDVATNVLQRN-PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 +W R +AL + N L+ I AI ND MA+G QA+ AG T K++V G D I + Sbjct: 207 NWSREEALTLVENWLETFSGKIDAIVAHNDEMALGAIQALEAAGLTDKIVVTGVDAILDG 266 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 V+ G + TV Q+ G+ ++ D + + K + V + Sbjct: 267 CNAVKDGTLLGTVYQDAGLEGSEAVQKAYDVLEGKVTEKELSYIDMKWITKDNVDE 322 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 155/291 (53%), Gaps = 8/291 (2%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 +A A + A+V+KTL+NPF+++M+KG K LG+ + + + E + Q+Q+ EDL Sbjct: 44 AAPNARKIALVMKTLTNPFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIEDLI 103 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + I AP S+ LV + A + GI ++N+D ++D + +K G F++ DN Sbjct: 104 RMKFDAIVIAPGDSLRLVPVLKAAQEAGIRIINIDNRLDAEAMKGQGMAPVPFISVDNEK 163 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 + A FI ++ + + AI+EG + RR GA AF++ I+LVA + A+W Sbjct: 164 AAYESAGFIAREIH-KPAQAAILEGIRSADNSRQRRVGAERAFRENPLIRLVARESANWK 222 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 + DV + +P+I ++CAND MA+G Q + +G+ G V V D + EA++ + Sbjct: 223 IDEGRDVTRRLFSDHPDITLLFCANDMMALGAIQFLQESGRYG-VKVAAYDALEEAKRAI 281 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 +G+M TV Q A+ G G+ L V PE LV++ LVT Sbjct: 282 LSGRMEVTVNQQAAEQGYQGIILASRVLNGEAV------PEVVLVETSLVT 326 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 142/289 (49%), Gaps = 9/289 (3%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF--ASPSEGDFQSQLQLFEDLSNK 81 E AVV K + FW +++G AK VD+ E D Q+ L ++ + Sbjct: 42 PIELAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQ 101 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 G+ +A + L +A +GI +VN+D D TDNVA Sbjct: 102 GVDGLVYAATDAKVLHDVTQQALDQGITVVNIDSGTDPQPENVPVF------ATDNVAAA 155 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 + +++++LG +GG+VA I + G A+ + R G K+ Q+KLVA Q ++ + Sbjct: 156 ERATEYLVEQLGEDGGKVAFIPFQPGTATNDTRTEGFKNVLKENPQVKLVAEQSSESNYN 215 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +AL V ++L +P++ AIY AN+ +G A+AV +AGK G++++VG D P+ K V Sbjct: 216 RALQVTEDILTAHPDLDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVRE 275 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 G ++A +AQNP +G G+ V ++G+ + LV + Sbjct: 276 GVVSALIAQNPFRMGYDGVNAAVKMIRTGEQVEGG-DTGAILVTRENID 323 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 130/321 (40%), Gaps = 29/321 (9%) Query: 1 MNKYLKYFSGTLVGLML----------------STSAFAAAEYAVVLKTLSNPFWVDMKK 44 M L L+ + T + + V L TL NPF+ + Sbjct: 1 MKHRLFIALACLLTVFAGCNKSENASTSTDTQPPTGSASKGTIGVSLLTLDNPFFKVIGD 60 Query: 45 GIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAW 104 I E K G + + D Q +D K I +P S ++V + A Sbjct: 61 NIVSEGKKRGYDAVVVSGDK--DVAKQSNQIKDFIVKKVSAIVLSPCDSKSIVPVIQEAN 118 Query: 105 KKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEG 164 GI + +D + G + + TDN G + A +I+ LG GG++AI+ Sbjct: 119 AAGIPVFTVDIP-----CHEPGVKIATQIATDNYGGGKEAAKAMIEALGEAGGKIAILHF 173 Query: 165 KAGNASGEARRNGATEAFKKA-----SQIKLVASQPADWDRIKALDVATNVLQRNPNIKA 219 K S + R G E S++ +VA + + + A + LQ NP++ Sbjct: 174 KQ-AESCQLRVKGFREIIDAHNAEGKSKVDIVAELESGGAKDQGYKAAEDTLQANPDLHG 232 Query: 220 IYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATG 279 I+ ND A+G A+ AGKT +V++VG DG PE ++ ++ G++ A Q P +GA Sbjct: 233 IFAINDPAALGARAALEKAGKTDQVVIVGFDGQPEGKQAIKEGKIYADPIQFPDKMGAQI 292 Query: 280 LKLMVDAEKSGKVIPLDKAPE 300 + ++ K + P P Sbjct: 293 VDAIIQQSKGETLPPQMLIPT 313 >UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS39_9DEIN Length = 320 Score = 259 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 180/304 (59%), Gaps = 5/304 (1%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 + L + L L T FA A ++KT +NPFW M+ GI D A+ V++ + A Sbjct: 2 RLLTASTAVLAALAWGTLGFAQQLTIAALMKTTANPFWGAMEAGIRDAAQKGNVNLILQA 61 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 SE D + QL +L + + + A ++SVNL+ + +A ++ I +V+LD +D Sbjct: 62 VASETDVEPQLNACLNLLQRKPQALVVAAINSVNLLPCLKQANQQNIPIVDLDGNLDPAV 121 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLG-AEGGEVAIIEGKAGNASGEARRNGATE 180 L++ G + +++DN GA A +++ KLG G+V +IEG AGN +G ARR+G TE Sbjct: 122 LQREGVKIAFSISSDNRRAGASAAEYVVSKLGQGFSGKVLVIEGLAGNVTGAARRDGFTE 181 Query: 181 AFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 K+ A ++VA+ P DWDR+KA ++ + LQR+P++ AIYCANDTMA+G +AV AG Sbjct: 182 RLKQIAPNAQIVATLPGDWDRLKAANITNDTLQRHPDLAAIYCANDTMALGAVEAVFAAG 241 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 K KVLVVGTDG +A K + AG++ A+VAQ P +G+ ++ ++ K +V P P Sbjct: 242 K--KVLVVGTDGNSDAVKSIRAGRLNASVAQLPFLVGSRAIENVLKVIKGEQVDPKIIVP 299 Query: 300 EFKL 303 + Sbjct: 300 TLVI 303 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 7/311 (2%) Query: 4 YLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 L V + A++ ++ F++ M KG E+ AK LGV + P Sbjct: 11 VLTLSLLIAVAMYGLAQQQKKYTIALIPGLTTDGFYITMHKGAEEAAKRLGVELIFQGGP 70 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 E +Q+ + + + I AP L+ P+ RA + GI ++ +D I + Sbjct: 71 -EFSPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITVDTFIGENGQY 129 Query: 124 KAGGN----VEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + G A+V +DNV G A + +G +G +V + K G ++ + R G Sbjct: 130 QTGKGNADFPLAYVASDNVEGGRIAARALAKAIGEKG-KVYVSNVKPGISTTDQREQGFK 188 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 E KK I ++A+Q D D KA L RNP++ ++ AN A+G A V NAG Sbjct: 189 EEMKKYPGITVLATQYNDNDANKAASQLAAALARNPDLAGVFGANLFSAIGAANGVKNAG 248 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 K G V V D ++ G + V Q+PA++G ++ V A K+ P Sbjct: 249 KRGAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAVEWAVKALNGEKI-PNRYGT 307 Query: 300 EFKLVDSILVT 310 + ++D V Sbjct: 308 GYTVIDRANVD 318 >UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic component n=12 Tax=Proteobacteria RepID=Q2SMT1_HAHCH Length = 309 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 12/314 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K S + + A A + V + + F ++ GIE AK SVD+ Sbjct: 1 MKKL--ALSVLASAMFAGSVAAADLKIGVSMAVFDDNFLTALRNGIETAAKDK--SVDVQ 56 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + +QL ++ I P+ + V + A GI L+ ++ + Sbjct: 57 IEDGKNEVGTQLNQIQNFIASGVDAIIVNPVDTDATVSISSDAEAAGIPLIYVNRQPINV 116 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 N +AFV ++ G + LG +G V ++ G+ N + R + Sbjct: 117 NQLPDN---QAFVASNEEVSGTLQTEEVCRLLGGKG-NVVVMMGELSNQAAIQRTKDIHD 172 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 K + S +K+VA Q A+W R+K D+ TN L A+ ND MA+G QA+ + Sbjct: 173 VIKRKECSGMKVVAEQTAEWSRLKGNDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKAS 232 Query: 239 GKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G+ V+V G D P+A +++G + TV Q+ GA + V K V Sbjct: 233 GRKMDSVVVAGIDATPDALAAMKSGDLDVTVFQSAKGQGAGAVDAAVRLAKGENVDQKVW 292 Query: 298 APEFKLVDSILVTQ 311 P F+LV + + Sbjct: 293 VP-FELVTPANLDK 305 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 11/291 (3%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 +A L+ LS F ++ +E + K +V + + +E Q + Sbjct: 41 AAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNY-DNVKLIINDAESQSDKQASQLDSFV 99 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + + +P+ + L V GI ++ + D + +V + N Sbjct: 100 AQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADVTGDQGQ-------VWVGSSNEN 152 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 G ++ +KLG +G ++A++ G G + + R G K I++V Q +W Sbjct: 153 GGEIEMKYVAEKLGGKG-KIAVLRGPLGAFAEQGRFAGYETVLKDYPDIEIVFDQTGNWQ 211 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R +A+ + N+L + AI C ND MA+G +AV AGK ++ + G D I +A + Sbjct: 212 REEAMALIENLLTAGTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALDSI 271 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 +AG++ AT Q+ G L + V A + V +D F+LV V Sbjct: 272 KAGELDATCFQDAIGQGTNALDMAVKAARGETVERMDI--PFELVTKDNVD 320 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 20/312 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDI 59 KY+K+ + L L+ A V + + + M I EA GVSV+I Sbjct: 6 KYMKWITVLFCLLGLAACRQDAPRFRIGVAQCS-DDSWRHKMNDEILREAMFYDGVSVEI 64 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + + D + Q + +K + + + + V A++KGI ++ +D KI Sbjct: 65 RS--AADDNRKQAEDVHYFIDKGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILS 122 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 D A++ DN +G ++I L +G V + G G+ R G Sbjct: 123 D-------KYTAYIGADNYEIGRAVGNYIASSLKGKG-NVVELTGLGGSTPAMERHQGFM 174 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 A IKL+ A W+R A ++L+R+P I A+Y ND +A G QA AG Sbjct: 175 AAISNYPDIKLIDKADAAWEREPAEVEMDSMLRRHPKIDAVYAHNDRIAPGAYQAAKKAG 234 Query: 240 KTGKVLVVGTDGIPE---ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 + +++ VG D +P ++V + AT G ++L ++ + K P + Sbjct: 235 REKEMIFVGIDALPGKGNGLELVLDNVLDATFIYPTN--GDKVMQLAMNILE-KKSYPRE 291 Query: 297 KAPEFKLVDSIL 308 +VD Sbjct: 292 TVMNTAVVDRTN 303 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 20/304 (6%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 ++ +A + + TL+N F+V +K G+E AK G + + + GD Q Q+ Sbjct: 60 VANAAGGKTKIGFSVSTLNNAFFVGLKAGVEKGAKEQGFDL--VQTNANGDAQQQVNDAI 117 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 +L ++ + P+ S ++ V +A I + LD D GG V +FV +D Sbjct: 118 NLLSQGVTALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSD-------GGKVTSFVASD 170 Query: 137 NVAVGAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 NVA+G A +I D+L G+ G V + G G + R G ++ K IK+VA Sbjct: 171 NVALGQTAAKWIADQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAKYPDIKVVA 230 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLV 246 Q +D+ K+L+ TN+LQ+ P I A++ AND +G +A+ NAG+ +LV Sbjct: 231 RQEGAFDQEKSLNAMTNILQKYPQIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILV 290 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 +G DG +A + AG+ AT++QNP + A L+ + D + K +P + A L+D Sbjct: 291 IGADGTAQALSAIRAGKQDATISQNPIQMAAKSLQFVADY-TAKKDVPANYAWPTLLIDK 349 Query: 307 ILVT 310 + Sbjct: 350 SNID 353 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 155/318 (48%), Gaps = 26/318 (8%) Query: 2 NKYLKYFSGTLVGLMLSTSAFA-----------AAEYAVVLKTLSNPFWVDMKKGIEDEA 50 K K FS +V ++ A AVVLKTLS+P+W ++ G + Sbjct: 3 KKKTKLFSTAVVLTCMALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAG 62 Query: 51 KTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYL 110 K LGV V + +E + Q+ + ED N++ + +P +V + A + + Sbjct: 63 KELGVDVTVVGPNAESEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPV 119 Query: 111 VNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNAS 170 + +D + N +F+ T+N G +G + L +G +VAII G GN + Sbjct: 120 LLIDTDAKLKNK-------TSFIGTENYEAGYEGGKLLSSLL-QKGDKVAIISGALGNTA 171 Query: 171 GEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMG 230 + R GA A ++A + +VA QPAD D+ KA+ V N+LQ+N ++K ++ AND MA+G Sbjct: 172 TDERVKGAKAALEEA-GMVIVAEQPADSDKTKAMSVMENILQKNNDVKGVFAANDDMALG 230 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 V +AV G V V+GTDG EA + + G++ T+AQNP +G G+K + A Sbjct: 231 VLRAVEAKGL--DVKVIGTDGTLEAVESILDGKLAGTIAQNPYKMGYEGVKNALAAINGE 288 Query: 291 KVIPLDKAPEFKLVDSIL 308 KV +++ Sbjct: 289 KVDKR-INSGVEVITKDN 305 >UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Streptomyces RepID=B4UZK6_9ACTO Length = 322 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 161/288 (55%), Gaps = 4/288 (1%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A+ A+V + +NP+W ++ G E K GV V++ A SE D + L+ + Y Sbjct: 19 EAKIAIVTRNFTNPYWAALRDGAIAEGKKQGVKVEVQAGASETDSTGENAKISTLAGQGY 78 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 P+++ N++ P+ ++ I ++NLD +ID + K+AG + +F+ +DN++ G + Sbjct: 79 NCFGVVPVNATNVITPLVPVAQRKIPILNLDTQIDANASKQAGVSYASFIGSDNLSAGQQ 138 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 ++ +G +G EVAI++G AG +G R+ G TE ++ +VA+QPAD+D+ K Sbjct: 139 AGEGLLKLMGGKG-EVAILQGIAGEQNGINRQKGFTEKVA--GKLDIVATQPADYDQAKG 195 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 V +L+ +P I I+ ANDTM +G AQAV NAG TGKV ++ DGI A + V+AG Sbjct: 196 QTVTEAILKAHPKITGIFAANDTMGLGAAQAVRNAGLTGKVSIISVDGISAALEAVKAGT 255 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ T++Q P G ++ +D KV P L+DS V + Sbjct: 256 LSGTISQYPYAEGQLAVQACIDLVAKKKV-PSRIVAPIALIDSTNVDK 302 >UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGX3_SEBTE Length = 319 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 127/326 (38%), Gaps = 25/326 (7%) Query: 1 MNKYLKYFSGTLVGLML--------------STSAFAAAEYAVVLKTLSNPFWVDMKKGI 46 M K+ Y LV ++ + V + + F M G+ Sbjct: 1 MKKFRNYVIMGLVSMLSIFLISCSQKGDTADGGQGGKKIKVGVSIANFDDTFLTYMMDGM 60 Query: 47 EDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK 106 + A+ G +++ ++ D Q+ E+ + I P+ + A Sbjct: 61 KKAAEKEG-DIELEFVDAKEDIAKQMNQVENFVTQGKDVIIVVPVDTSAADPMTNAAVTN 119 Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 G +V ++ + +V ++ G ++ +K+G +G + I+ GK Sbjct: 120 GTKIVYVNRNPGNL------PDGAYYVGSEEKKAGIMQMEYLAEKMGGKG-NIVILMGKL 172 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCAND 225 N R G E KK IK++ Q W R + N L + N I AI ND Sbjct: 173 DNEGTIKRTEGVEEIAKKYPDIKILDKQTGLWQRTDGMAKTENWLNKYGNEINAIVSNND 232 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 MA+G QA+ ++GKTG + V+G D P+ + AG ++ATV Q+ G +++ Sbjct: 233 DMALGAVQALKDSGKTG-IFVIGVDATPDGLAALAAGDISATVFQDADGQGGGAVEVAKK 291 Query: 286 AEKSGKVIPLDKAPEFKLVDSILVTQ 311 A V+ P FKLV + + Sbjct: 292 AANGETVVKETWVP-FKLVTPENINE 316 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 139/318 (43%), Gaps = 18/318 (5%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL---GVSVDI 59 + L + L + LS +A + AV+ K ++ +W + G + L G+ VD+ Sbjct: 6 RNLLTCALFLSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKGIKVDL 65 Query: 60 F--ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 E D Q+Q+ E+ + G+ APL + +V PV A + I +V D + Sbjct: 66 IWKGPLREDDRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVIFDSAL 125 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 D +FV TDN G A + L +G V ++ G+AS E R G Sbjct: 126 KTD-------KYVSFVATDNYKGGQLAAERMGQLLEGKG-NVILLRYAVGSASTEEREAG 177 Query: 178 ATEAFK-KASQIKLVAS-QPADWDRIKALDVATNVLQRNP-NIKAIYCANDTMAMGVAQA 234 + K K IK+++S Q A R A + N+L R + I+C + + +A+A Sbjct: 178 FMDTLKSKFPNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTVAMAKA 237 Query: 235 VANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 + + GK GKV +VG D ++ ++ G + V QNP +G G+ MV + KV Sbjct: 238 LRDIGKAGGKVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQGEKVE 297 Query: 294 PLDKAPEFKLVDSILVTQ 311 ++V + Q Sbjct: 298 KR-IDTGVQIVTPENMEQ 314 >UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9KAG4_BACHD Length = 323 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 72/329 (21%), Positives = 131/329 (39%), Gaps = 29/329 (8%) Query: 1 MNKYLKYFSG--TLVGLMLSTSAFAAAE----------------YAVVLKTLSNPFWVDM 42 M K L+ L+L+ V + L + F M Sbjct: 1 MKKNKTILIAFSILMSLLLAACGSGGETSGDGNGESTGDSGQKVIGVSISNL-DEFLTYM 59 Query: 43 KKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAR 102 + +++EA + S ++ D Q+ E+ ++N I P+ + + V V Sbjct: 60 QDAMKEEAANY-PDFEFIFSDAQNDSTQQMAQVENFISRNVDAIIVNPVDTTSAVDIVNM 118 Query: 103 AWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAII 162 GI ++ + D + AFV ++++ G + L EG +AI+ Sbjct: 119 VNDAGIPIIIANRTFDGVDQ------ATAFVGSESIQSGLLQMEEVAKLLNNEG-NIAIM 171 Query: 163 EGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYC 222 +G+ G+ + R G + ++ +++V A +DR + + + N L I A+ Sbjct: 172 DGELGHEAQIMRTEGNKQIIEEHDGLEVVLQGTAKFDRSEGMRLMENWLNSGTEIDAVVA 231 Query: 223 ANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL 282 ND MA+G A+ GK V+V G D P A + ++ G++ TV Q+ GAT +K+ Sbjct: 232 NNDEMALGAILALEAVGKLDDVIVAGIDATPAALEAMKEGKLDVTVFQDAKGQGATSVKV 291 Query: 283 MVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 V A V ++LV V + Sbjct: 292 AVQAANGEDVEDAMI--PYELVTPENVEE 318 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 14/296 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 +T + +A L T +NPF+V M++ + +A LG++++ + D +Q Sbjct: 40 TTTGSASAKTITFALSTQANPFFVQMRESAQKKADELGLAINFQ--DAADDSATQSNQLA 97 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + + + P S + V + + I +V +D ++ NV +++ +D Sbjct: 98 NAAASGTGVVIINPTDSDAMAPAVQQLVDEKIPVVAVDRAVN-------NANVASYIASD 150 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N G + A + D + EG E+ +++GK G+++ R G E K IK+VA Q A Sbjct: 151 NETGGKQAAKVLSDAINGEG-EILVLQGKTGSSASRERGKGFDEGLKDNPNIKVVAKQTA 209 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV-ANAGKTGKVLVVGTDGIPEA 255 +++R K LDV TN+LQ +PN+KAI+ ND MA+G +A+ + AGK V V+G DG +A Sbjct: 210 EFERAKGLDVTTNLLQAHPNVKAIFAENDEMALGAIEALGSKAGK--DVKVIGFDGAEDA 267 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 K ++ G+M A++AQ P + + K + E V + Sbjct: 268 LKAIKDGRMYASIAQQPVKMAEQAVIEASKLLKGETATKKMQV-EVVAATKENVDK 322 >UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX36_HERA2 Length = 335 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 150/306 (49%), Gaps = 6/306 (1%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS-- 62 L GT +ST+ + +V+K+LSN F+ M+ G E+ A+ D A+ Sbjct: 33 LLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQNATRFDFTATGI 92 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 E DF +Q+ FE L N+ Y I AP S+ LV PVA+A K GI ++N+D +D Sbjct: 93 NDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVALDEATK 152 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 K AG + AF DN A + LGA GG+VA++EG + RR G +A Sbjct: 153 KAAGID-LAFFGPDNRAGAKMSGEVLAKALGA-GGKVAVLEGNPEADNAVQRRLGFDDAI 210 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 S + LV ++ W+ + + L++ P+++ I CAND+MA G QA+ A Sbjct: 211 ADGS-LNLVVAESGHWETSEGQSITAAWLKKYPDLQGIMCANDSMAFGAVQALEAANLLD 269 Query: 243 KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 K+ VVG D IP + +++ G+M ATV Q A + A G+ K K E K Sbjct: 270 KIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEK-FSGWIRTELK 328 Query: 303 LVDSIL 308 L+ Sbjct: 329 LITKDN 334 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 16/303 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L + S L+ + V+ K++ +P+W +++G++ K LGV F Sbjct: 1 MRKLLVFLSVVLITGLSLA-----LTIGVIGKSV-HPYWSQVEQGVKAAGKALGVDTKFF 54 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 E D +QLQ+ E + GIA AP ++ + +A + GI ++ LD Sbjct: 55 VPQKE-DINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDTD---- 109 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 ++ TDN G + + LG +G +V I G + R G + Sbjct: 110 ---SPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKG-KVVIGTGSLTAMNSLQRIQGFKD 165 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A S+I++V + D +A+ +A L +P++ A + A V NAGK Sbjct: 166 AIAD-SEIEIVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAYNGPSQALVVKNAGK 224 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 GKV +V D P+ + V+ G + AT+ Q P +G + ++ K G L P+ Sbjct: 225 VGKVKIVCFDTTPDILQYVKEGVIQATMGQRPYMMGYLSVTVLYLMNKIGVQNTLMMLPK 284 Query: 301 FKL 303 + Sbjct: 285 VTV 287 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 20/324 (6%) Query: 1 MNKYLKYFSGTLVGLM---------------LSTSAFAAAEYAVVLKTLSNPFWVDMKKG 45 M K + F+ L+ + + + A + V++ ++V +++G Sbjct: 1 MKKIIFLFTILLLIMSCGNKQETKAEGAAGNTAETKEAKKKIGVLIPGP-VGYFVAVREG 59 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 I+ A V + S + D QL EDL +K IA A + S V A + Sbjct: 60 IDKAAAENNVEIT--YSDAGWDASKQLSQVEDLISKKVDLIAIAAVDSNAAKTAVRMANE 117 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 I ++ I + G + +V + V G LG +GG+V +IEG+ Sbjct: 118 ANIPILAFTNAIGDKENGEYEGLIT-YVGQNEVETGKLTGELAKSLLGEKGGKVVLIEGR 176 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 G + RR G EA ++V +Q ++W++ +AL + +++Q+N I I +D Sbjct: 177 PGTSPQINRRKGVMEALDTNKNFEVVYTQTSNWEKEQALKIVEDLIQKNQTIDVIIAQDD 236 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 A+G A+ A K+LV+G G E V++G + T + + G T + V Sbjct: 237 NSAIGAGMALKEANLKDKILVIGLGGSTEGLNAVKSGLIDGTTYMSAVEEGYTAITAAVK 296 Query: 286 AEKSGKVIPLDKAPEFKLVDSILV 309 KV P+ + + + V+ V Sbjct: 297 YLNGEKVEPVTQMKQVE-VNKSNV 319 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 86/288 (29%), Positives = 130/288 (45%), Gaps = 9/288 (3%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + V K LS +W+ +K G E AK LG + E D Q+ + D N Sbjct: 27 ASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNVINDFVN 86 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K I A + L+ P+ RA + GI ++ +D I+ D + + T+N Sbjct: 87 KKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFP-------ISHIATNNKEA 139 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 K A + + +G +G EVA I AG A+ AR NG E I LVA Q + D Sbjct: 140 AKKAAEVLANIIGKKG-EVACIPFVAGAATSIARENGFKEGISNYKNIDLVAVQYSQSDY 198 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A+ V N+L +PN+K I+ AN+ A+G A+A+ GKT V++VG D ++ Sbjct: 199 ATAMKVTENILTAHPNLKGIFAANEAGAVGAARALKARGKTADVILVGFDAAQTEIDAMK 258 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G + A + Q P +G G+K V A + +V L + Sbjct: 259 EGIIDALIVQRPYMMGYEGVKNAVAALEGEEVEKL-IDTGVVVATPDN 305 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 17/316 (5%) Query: 2 NKYLKYFSGTLVGLML--------STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL 53 K L + +++ S S A+++K+ + +W+ +K G E AK Sbjct: 3 KKRLALITMSVMLSAGVLAGCGQKSASDSTKKNIALIVKSTDSEYWLSVKAGAEKAAKEA 62 Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 G ++ +E D Q ++ + ED N+ GI A + L+ PV A I LV + Sbjct: 63 GANIIFKGPATEQDIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVTV 122 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEA 173 D +D D V +F+ TDN ++ A + +L + G+V ++ G ++ Sbjct: 123 DSGVDSD-------KVASFIATDNEKAASQAAD-VCAELIGKSGKVGVVNFVPGVSTAVQ 174 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQ 233 R G + K S I+L+ +Q + D+ KA+ + ++L NP++KAI+ AN+ A+GVAQ Sbjct: 175 REKGFRDGMSKHSGIELLKTQYSQSDKSKAMAITEDILTANPDVKAIFAANNRSALGVAQ 234 Query: 234 AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 A+ G GKV VV D P+ K +E G +TA + QNP +G G+K ++ K V Sbjct: 235 ALKGKGVAGKVKVVAFDADPDEIKGIEDGSITALIVQNPYKMGEEGVKNVLALMKGETVE 294 Query: 294 PLDKAPEFKLVDSILV 309 +V + Sbjct: 295 KR-IDTGVTIVTKENI 309 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 36/334 (10%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA--------------------------EYAVVLKTL 34 M + L + L + + + +V+ + Sbjct: 1 MKRILSAILSAAMAASLVACGSSQSHSSAPADTPAPSVPAESAADAPDDKLTFGLVVMST 60 Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 ++ +W+ +K G ++ +G + D Q Q+ L E+L N I PL S Sbjct: 61 NSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDIQGQVSLMENLINSKVDAILLTPLDSD 120 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 L PV +A GI ++ +D ++ D +F+ TDNVA G +I+ +G Sbjct: 121 ALAAPVEKAMDAGIPVIVIDSAVNTD-------KYTSFIATDNVAGGRMAMERLIESIGG 173 Query: 155 EGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRN 214 G EV ++ AG S +AR GA E I ++ Q D+ +A+ NV+ N Sbjct: 174 SG-EVVVVNALAGIPSNDARGQGAEEYAATVDGITVLPQQHCL-DQAEAMTATENVIIGN 231 Query: 215 PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 PN+K I+ + A+G AQA+ + GK G++ +V D + K++E G + A V Q P + Sbjct: 232 PNLKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKLLEDGTIDALVVQQPYE 291 Query: 275 IGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 +G G++ V A +V P APE + Sbjct: 292 MGKIGIEYAVKALNGEEV-PKTVAPEVVIATKDN 324 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 5/293 (1%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 M+ ++ TL+N + + + ++ LG+ +I A + QL + Sbjct: 72 MVPDGDYSKYTIGFCGMTLNNEYHIIVANAVQQACNALGIKCEIQAGSQHASVEEQLTII 131 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ ++ GI P +S L+ + I ++NLD K+D LK G ++ F T Sbjct: 132 ENYVSQGVDGIILVPAASEGLISALQECESANIPVINLDTKLDDSTLKTLGKDI-PFYGT 190 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 DN G + ++ +G + AI+ G G + + R NG + K + LVA Q Sbjct: 191 DNYVGGQLVGEEVA-QMYPDGCKTAILRGVQGQTNDDDRYNGFLD--KAGDVVDLVAEQH 247 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 A+W+ + N++Q N +++ IYC ND M +G QAV AG T ++ + DG+ E Sbjct: 248 ANWETDQGYTAIQNIIQANKDLQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEG 307 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 + V G+ +T AQ P +G G+ M K +L+ S Sbjct: 308 LQYVVDGKFVSTCAQQPIKMGKLGVANMAKIFAG-KDAESYIDTGCELITSEN 359 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 83/322 (25%), Positives = 128/322 (39%), Gaps = 22/322 (6%) Query: 2 NKYLKYFSGTLVGLMLSTSA---------FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 K + +G+ + + + L P+ V M I A+ Sbjct: 3 KKAISILLTAAMGVSVLAAGTVTVSAAEKKDKYVIGMSQCNLGEPWRVAMNDQIAMAAEK 62 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 ++ + + D Q+ E+ I +P + L V+ A+ GI ++ Sbjct: 63 H-PEFEVIFADAAQDNSKQIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVIL 121 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 LD KID D F+ DNV +G +I D L +GG+V I+G G + G Sbjct: 122 LDRKIDGD-------KYTQFIGADNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGI 174 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R NG E KK +I++VA ADW R KA+ VA +LQ N I ND MA G Sbjct: 175 DRDNGFREGIKKNDKIEIVAVNNADWLREKAITVAEEMLQTNDEIDLFLALNDPMAEGAY 234 Query: 233 QAVANAGKTGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 A NAG+ G +L VG DG+P + V G+++ T G ++ Sbjct: 235 IAAKNAGREGDILFVGFDGLPTPDGGIRSVMDGRLSMTQVYPTG--GTEAIESAYQLLVE 292 Query: 290 GKVIPLDKAPEFKLVDSILVTQ 311 GK + ++V + Sbjct: 293 GKELDKTLTLTSEIVTPDNAEE 314 >UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Proteobacteria RepID=A8I1T9_AZOC5 Length = 324 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 10/303 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M+K + L+ +++ A AV K +NP++ ++ G E AK +G V + Sbjct: 1 MSKLKLFGVVLPAALLATSAFAADETIAVFTKNQTNPYFQTVRVGAEAAAKAMGAKVVHY 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 QL ED+ K I F P+ +V V + I +VN+ Sbjct: 61 IPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNV------- 113 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + AGG AFV D+ ++G + +++ ++G +G V I+EG G+ + R G + Sbjct: 114 TDRSAGGKFLAFVGADDYSLGLETGRYLLKEMGGKG-NVVILEGVKGSLTNVDRVRGFND 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K+ +KL+ASQPA++ R++ L V N++Q +P I + AND MA+G +A+ A + Sbjct: 173 ALKEFKDVKLLASQPANYQRLQGLQVMENLMQSHPQIDGVLAANDAMAIGAIEALDGANR 232 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 K VVG +G EA +++G++ A+ N G G + + A + ++ Sbjct: 233 KAK--VVGINGTKEAVDAIKSGKLLASGDYNGFLQGCIGTMVAIRALRKETIVNEVVLKP 290 Query: 301 FKL 303 + Sbjct: 291 TVV 293 >UniRef50_C5EQH1 D-allose-binding periplasmic protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH1_9FIRM Length = 356 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 142/290 (48%), Positives = 195/290 (67%), Gaps = 2/290 (0%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 + +YAV+LKT + FWV M KG+E E GV VD++++ SE D + QL + E Sbjct: 61 GVSDKKYAVILKTQATDFWVKMWKGVEAETAVKGVKVDLYSAQSEDDLEGQLTILESCIQ 120 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + Y GIA APLS VN++ + A KGI +V++DEK D L GG AFV TDNVAV Sbjct: 121 QGYDGIAIAPLSGVNVLPGIGEATAKGITIVDVDEKFDETELANQGGACVAFVATDNVAV 180 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 GAKGA +I+D G EG +VAIIEGK+GN S E R GA +AF ++ +++SQ ADWDR Sbjct: 181 GAKGAQYIVDTAG-EGAKVAIIEGKSGNQSSEDRTQGAKQAFTD-GKMDIISSQAADWDR 238 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 KA+D+A+ ++Q+NP++K IYC ND MA+G QAV NA K G++++VGTDG EA + Sbjct: 239 QKAMDIASTLIQQNPDLKGIYCCNDGMALGAVQAVINANKLGEIMIVGTDGDAEAVSSIA 298 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 +++ATVAQ+PA IGAT L L+++A +SGK + PE V+S+LVT Sbjct: 299 NNELSATVAQDPAQIGATSLDLLIEAVESGKKGEVGTFPEKTPVESVLVT 348 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 14/287 (4%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 + + V L T +NPF+ + I+ E G V++ + E D Q +D Sbjct: 46 GSVSKGTVGVSLLTTTNPFFNVIADNIKSELVKEGYDVEVVSG--EFDVARQKNQVKDFI 103 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + I P S + + A GI + D G V + + TDN+ Sbjct: 104 VAGHAAIVLCPCDSRGIGPAIQEATAAGIPVFTAD-----IACLAPGAEVVSHIATDNLG 158 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA------SQIKLVAS 193 G + A +I+ +G+ GG+V I++ KA S R G E K S I +V+ Sbjct: 159 GGKQAAEAMIEAVGSAGGKVVILDFKA-AESCILRVQGFKEVIDKHNSENPSSAITIVSE 217 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 P D + K+ A + LQ +P++ I+ ND A+G A+ A K +V +VG DG P Sbjct: 218 LPGDGQKDKSYKAAEDALQAHPDLAGIFAINDPSALGARAALEKANKADQVKIVGFDGQP 277 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 + + ++ G++ A Q+P IG +V + +V P Sbjct: 278 DGMQAIDEGKIFADPIQHPDQIGKRVAASIVSYFRGEEVPKEQLIPT 324 >UniRef50_C6D2L3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacillales RepID=C6D2L3_PAESJ Length = 332 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 24/324 (7%) Query: 1 MNKYLKYFSGTLVGLML-----------STSAFAAAEYAVVL----KTLSNPFWVDMKKG 45 M++Y + + + +L + S +++ K+ + FW + G Sbjct: 1 MSEYRRRSASVAIAAILIVVAVVGIYKWAASQRTEKTVDIIVTVKAKSSAIDFWKVLITG 60 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 +ED A G +V + PSE + +Q + + + I A LV + K Sbjct: 61 VEDAANEFGANVTVIGPPSETEIDTQTEQLKQAIRQKPDAIVMAATDYNRLVPVAQQIVK 120 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG-EVAIIEG 164 GI L+ +D +I+ D + +F+ TDN+A G K + L +VAI+ Sbjct: 121 AGIKLITVDSRINSD-------DALSFIATDNIAAGEKAGEEMAKLLPESSSSKVAIMSY 173 Query: 165 KAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAN 224 G +S R G + + S I++ ++ ++ KA ++ +L +P IK I N Sbjct: 174 VYGTSSQLEREKGVRQWLEGHSHIEVASTLYSEGRLEKAYELTKELLSEDPGIKGIVGLN 233 Query: 225 DTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMV 284 + +G +A+ + G +GKV +VG D + K++E G + AT+ Q P ++G +K + Sbjct: 234 EPSTVGAGRAIRDLGLSGKVKLVGFDSSVDEVKLIEGGVLQATIVQKPYNMGYLSVKTAI 293 Query: 285 DAEKSGKVIPLDKAPEFKLVDSIL 308 +A + KV P E +++ Sbjct: 294 EAVRGKKV-PKLIDTESVIINKDN 316 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 137/289 (47%), Gaps = 10/289 (3%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS--VDIFASPSEGDFQSQLQLF 75 + S + A ++K+L + F+++M + E + V+I A + + + Q+QL Sbjct: 47 TASTGQKYKIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQLV 106 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E I AP S +V + +A GI +V + K + GG++ ++V Sbjct: 107 EQCITNKMDAIVIAPCDSEGIVPAIKKANDAGILVVTANTKAN-------GGDIVSYVGA 159 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 N VG A+ + +KLG +G +V +IEGKAGN++ E R G EA K+ I+L+ASQP Sbjct: 160 QNFDVGYSLATALFEKLGGQG-KVILIEGKAGNSTSEERAEGFKEALKEYPGIELLASQP 218 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 ADWDR A+ V N LQ I + M +G +A+ +AG+ +++ + D + Sbjct: 219 ADWDRASAMTVMENCLQTYDQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDV 278 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 ++AG + A+ QN + V A KV P + Sbjct: 279 ISALKAGDLYASGNQNEQSQAYIAIMTAVFALDGYKVDSSQIMPITVVT 327 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 140/337 (41%), Gaps = 39/337 (11%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF------------------------AAAEY--AVVLKTL 34 M + + ++ + + + A + + L +L Sbjct: 4 MKRLVAMLVAAIMLITFAACSSDTSKNSSEESKSSDTTKVTETSKPADKKIVVGMTLYSL 63 Query: 35 SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSV 94 N F V + + +A LGV + I+ D +Q+ E + + I P + Sbjct: 64 KNEFTVRLSNAAKKKAAELGVELKIY--DGNYDPNTQINQVETMISDGVDAIILNPQDAK 121 Query: 95 NLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 154 + V +A I ++ ++ ++D + + ++V + +V G I DK+G Sbjct: 122 ACAVAVDKAAAANIPVIGVNTRVDSE-------KLTSYVGSKDVYAGELEMQAIADKIGG 174 Query: 155 EGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRN 214 +G + I++G G ++ R G KK IK++A + A+W R +A+ V N LQ Sbjct: 175 KG-NIVILDGPLGQSAQLERSEGIQNVLKKYPDIKVLAEKTANWSRSEAMTVMENWLQAF 233 Query: 215 PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPAD 274 I A+ ND MA+G +A+ K + +G DGI +A VE G + AT+ Q+ A Sbjct: 234 DKIDAVVAENDEMALGARKAIEA--KKLDIPTIGVDGITDALDAVEKGTLIATIFQDGAG 291 Query: 275 IGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 G+ L++ V K V + +F+ V V + Sbjct: 292 QGSKALEIAVAKAKGENVDK-EYWIDFEPVTKDNVAE 327 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 7/311 (2%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDE-AKTLGVSVDI 59 M + L + + + + A AV++KT ++ +W +++KG D AK ++ Sbjct: 23 MRRLLCAATMLCAAVAVGQAHAADRGIAVIVKTANSNYWQNVRKGAADAVAKVENYTMTF 82 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 SE Q+ + D + I AP LV + +AW+ I +V +D I Sbjct: 83 QGPTSESAVADQVNMVADAVTQKVAAIVLAPSDPDALVPSIRKAWEAHIPVVLIDSMISD 142 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 K ++F+ TDN A G ++D +G G +VAI+ G S R G Sbjct: 143 SGAKY----YQSFLATDNEAAGEALGKEMVDHVGQTG-KVAIMSYVPGVGSEIGRVGGFR 197 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 + + S I++V + A++ T+VL NP++K I+ AN+ A+GV +A+ AG Sbjct: 198 KYIAEHSHIQIVGPFYSQSQMALAMNQTTDVLASNPDLKGIFAANEMTAVGVGRAIQQAG 257 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 K+GK+ + DG + + V +G Q +GA G++ + K Sbjct: 258 KSGKLYAIAFDGNEDEQGFVRSGTFQLLAVQGSYAMGAKGVETAIGVLTGAK-PTKYVNT 316 Query: 300 EFKLVDSILVT 310 V S + Sbjct: 317 GVVFVTSANLD 327 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 86/288 (29%), Positives = 135/288 (46%), Gaps = 15/288 (5%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + S F+VD++KG+++ A GV + GD +Q + ED + Sbjct: 58 EQIVVGFSNWSRSFEFYVDLEKGMQEVADAQGVKLITQ--DPNGDLAAQTKQVEDFITQG 115 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 GI P+ S V + GI LV D + AGG+V + + +DN G Sbjct: 116 VDGIVLCPIDSNAAVTEAETINQAGIPLVTTDIAV-------AGGDVASHIASDNTLGGQ 168 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRI 201 A FI ++LG G +VA+I S R G T+ K I++VA Q + R Sbjct: 169 LAAQFIGEQLGGTG-KVALIN-NPTITSLIERETGFTDTMAQKYPDIEIVAVQSGESKRE 226 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 K L V N+LQ NP+++ ++ ND M +G QAV A + +++VG D EA K ++ Sbjct: 227 KGLSVMENILQSNPDVQGVFAVNDMMGLGALQAVQAAQR-DDIVIVGFDATEEAVKYIKE 285 Query: 262 GQ-MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G + A+VAQNP ++G T ++ M+ +V P +LV + Sbjct: 286 GSALKASVAQNPVELGKTTMETMLKVIAGEQVEKNIPVP-VELVTAGN 332 >UniRef50_C6V848 D-ribose-binding periplasmic protein n=11 Tax=Gammaproteobacteria RepID=C6V848_ECOBD Length = 357 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 87/310 (28%), Positives = 136/310 (43%), Gaps = 10/310 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M ++ +L+ + S++ VV K + FW +K G E AK LG Sbjct: 42 MKTRHFIYALSLLACVSSSALAKDLNLPVVSKGFQHEFWQTVKMGTEAAAKELGDKTSYV 101 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 E Q+QL E+ + G+ A L + L V A +GI +V D I+ D Sbjct: 102 GPADETQIAEQIQLVENAMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGINSD 161 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 +FV T+N GA+ A + ++ +G +V II AG +S R G E Sbjct: 162 IP-------VSFVATNNRKAGAQAADALASQVNNKG-KVGIIAHVAGTSSAIERSEGFME 213 Query: 181 AFK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 K K IK++ Q +D D KA+D +++Q NP++ IY N+ +GVA A+ + Sbjct: 214 RMKEKYPDIKVLPVQYSDGDPQKAMDKTIDMIQANPDLAGIYGTNEGSTLGVANAIDSQN 273 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 GKV V+G D ++ G + V Q+ IG G+K + A V P Sbjct: 274 LKGKVKVIGFDSTEAIINFLKNGVIQGFVVQDAYQIGYQGIKTLNAALSGQAVEKEIDIP 333 Query: 300 EFKLVDSILV 309 K V++ + Sbjct: 334 -VKFVNAENI 342 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 10/302 (3%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 +G + S A + + K +NP+ V G+E K +G + A + Sbjct: 63 VTGIGAQIATSVKAGGDYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTAITQAPTTADS 122 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 + Q+QL E++ ++ I S ++ V +A G+ ++ + D + Sbjct: 123 VEEQVQLMENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGTPAAEDTFLRT-- 180 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 D G A + DKLG +G + I+EG AG ++ R NG + Sbjct: 181 ------GVDYYESGYTMAKAVADKLGGKG-KFIILEGPAGASNAIERLNGINTGLSEYEG 233 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 I++VASQ A++ R + + V N++Q+ +I A+ ND A+G QA+ A + VLV Sbjct: 234 IEIVASQTANFKRTEGMSVTENLIQQYTDIDAVIACNDESALGAVQALTAANMS-DVLVC 292 Query: 248 GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 G DG +A V+ G M AT +P G V P + Sbjct: 293 GFDGSVDATNAVKEGTMFATYNTDPYGSGFVACAYAVKYLNDKTEPEGKFIPFPTAANDP 352 Query: 308 LV 309 LV Sbjct: 353 LV 354 >UniRef50_UPI000185D1D6 putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D1D6 Length = 903 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 120/311 (38%), Gaps = 16/311 (5%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNP-FWVDMKKGIEDEAKTLGVSVDIF 60 +Y F + L+ Y + + S + M + ++ E ++ Sbjct: 4 RRYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWRQTMNEELKREVALYQADAEVL 63 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + D Q+ E + + +P S + +A+++GI ++ +D KI + Sbjct: 64 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 123 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + A+V +N +G + + I L +G +A + G G+ S R G + Sbjct: 124 S-------YTAYVGANNYQIGKEAGLYAIGVLKGKG-NIAEVRGTKGSTSDAERHKGFVD 175 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K A ++++VA ++ + A + Q +P+I ++ ND MA G +A Sbjct: 176 ALKNAPEVQIVAETWGNFLQADAKTQMQQIFQEHPHIDLVFAMNDPMAAGTHEAAMQFN- 234 Query: 241 TGKVL-VVGTDGIPE-ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 GK+ ++G D + + + +E A+ G ++L + + + Sbjct: 235 -GKIPFIIGVDALQQVGIQNIENSVQDASFIYPTG--GEKVIELAMKIL-HKQPFQRENI 290 Query: 299 PEFKLVDSILV 309 +VD V Sbjct: 291 LNTTVVDKSNV 301 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 124/280 (44%), Gaps = 13/280 (4%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 L T +PF+V +K+ +E A GV + + + D Q+ ED + Sbjct: 26 ADDITIGASLLTQQHPFYVQLKQAMEKAADDNGVELIVSI--ANQDLNKQISDVEDFIVR 83 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 I +P+ S +V + +A + GI ++ +D + G V+A V TDN G Sbjct: 84 GVDAIVLSPVDSKGVVGAIIKAKRAGIPVITVDISAE-------GVEVDAHVATDNYYGG 136 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 + L +G +VAII+ S R G EA K I++VA QP R Sbjct: 137 RIAGETMAKVLNGKG-QVAIIDY-PVVQSVRDRVAGFKEAVSKYPGIEIVAIQPG-ITRP 193 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +AL+ A N+LQ +P + I+ D A+ AV +AG V V+G DG+ EAR V+ Sbjct: 194 EALNTAQNILQAHPEVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEARNAVKK 253 Query: 262 GQ-MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 + A V Q P ++G GL+ + K KV Sbjct: 254 EESFVAVVCQYPGEMGRLGLETALRVIKGEKVEKEIPVLP 293 >UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGH9_9FIRM Length = 288 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 148/286 (51%), Positives = 200/286 (69%), Gaps = 5/286 (1%) Query: 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN-YKGIA 87 +VLKTLSNPFWVDM GI+ EA+ LGV+ DIFA +E D QL+ ED N Y G+ Sbjct: 1 MVLKTLSNPFWVDMADGIQAEAEKLGVTADIFAVDAETDIDGQLKKCEDAINSGSYDGLG 60 Query: 88 FAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASF 147 AP+++ NL+ V A +KG+ +VN+D KID D LK+AGG V F T+DN VGA GA + Sbjct: 61 VAPITATNLISAVVAANQKGMPVVNIDAKIDEDALKEAGGYVVGFATSDNHKVGAIGAQY 120 Query: 148 IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK--ASQIKLVASQPADWDRIKALD 205 I+++L +GG+VAIIEG+AG+ SGE RR+G E + + + ++V QPADWDR KALD Sbjct: 121 IMEQL-PDGGKVAIIEGRAGDLSGELRRDGCKETLEADGSGKYQVVDVQPADWDRQKALD 179 Query: 206 VATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT 265 VATN++ + P++ A + ANDTMA+GV QA+AN G TGK+L+VGTD E ++ ++AG M Sbjct: 180 VATNIITKTPDLNAFFVANDTMALGVMQAIANTGNTGKILLVGTDASDETKEAIKAGNMV 239 Query: 266 ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A V Q+PA IGAT L ++VDA K+G+ D KLVD+ LVT+ Sbjct: 240 A-VCQDPAAIGATCLDILVDAIKAGETGSPDYEAVSKLVDANLVTK 284 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 15/289 (5%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + + L+ P+ V M + I A+ + D+ + + D Q+ E+ K Sbjct: 47 SKYTIGMSQANLAEPYRVRMDEDIRKAAEKV-PQFDVQFADAAKDNSKQVSDVENFMTKK 105 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 + +P + L V +A+ +GI +V LD K++ + ++ DNV +G Sbjct: 106 VDLLMISPNEAAPLTDVVKKAYNEGIPVVVLDRKVEGEA-------FTTYIGADNVQIGR 158 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 + + + L +GG++ ++G +G+ R G E S+I++V + +W+R Sbjct: 159 QAGEYFKNTLLPQGGKIVQLKGLSGSTPAAEREKGFMEGIA-GSKIEVVDTADGEWERSV 217 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP---EARKMV 259 +L+ +P+I+A+Y ND MA G A AG+ + VG DG+P K V Sbjct: 218 GQQKMDALLKAHPDIQAVYAQNDPMAEGAWLAAQAAGRK-DLKFVGIDGLPIESGGIKAV 276 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 E G+++AT G ++ + +P ++ +LV Sbjct: 277 EQGRLSATNLYPTG--GEEAVEAARKLLIDCQPVPKEQTLPTELVTREN 323 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 15/313 (4%) Query: 1 MNKYLKY---FSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 M K + TL+ L ++ + A++ + NPF+ +G + +AK LG Sbjct: 1 MKKKTFLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGYDT 60 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 + + +GD Q QL E + K + + + + R K GI D +I Sbjct: 61 LV--ASHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREI 118 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 + G + ++N + +G +GGE + G + + + R G Sbjct: 119 NKT------GIAVTQIVSNNFQGAQLAGEKFAELMG-DGGEYVELLGPESDTNAQVRSEG 171 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 + + K+VA Q A+W + +A ++LQ NPNIK + ND+MA+G A+ Sbjct: 172 FHDILDNFPEFKMVARQSANWSQTEAFSRMESILQANPNIKGVITGNDSMALGAEAALQA 231 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSGKV-IPL 295 AG+ V +VG DG+ R + G + AT+ Q + ++G +P Sbjct: 232 AGRK-DVFIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQRVAEQADLYIRTGSTGLPE 290 Query: 296 DKAPEFKLVDSIL 308 + + L+DS Sbjct: 291 KQLMDCVLIDSSN 303 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 72/309 (23%), Positives = 118/309 (38%), Gaps = 11/309 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M + +G S A V + F ++ I+ EAK G+SV Sbjct: 1 MKYLKRIVLVAALGCSTSVLA---ETIGVSMAYFDQNFLTIIRHSIDKEAKARGISVQF- 56 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + GD Q ++ + I P++S K GI LV ++ Sbjct: 57 -EDARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIPLVYVNRTPGDS 115 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 L FV +D G + +G VA++ G +A R + Sbjct: 116 KLPAG----VVFVGSDEKQSGTLQMEELARLANYQG-NVAVMIGNLTDAGALQRTKDVEQ 170 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 K ++K+V Q A++ R + +D+ N + +I + ND MA+G A+ AGK Sbjct: 171 VVAKYPKMKVVQKQSANYSRSEGMDLMLNWITNGESIDIVAANNDEMAIGAIMALQQAGK 230 Query: 241 TG-KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 G KVLV G D P+ K + +G+M TV Q+ G + + K K+ P P Sbjct: 231 QGSKVLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIKGEKLDPYYWIP 290 Query: 300 EFKLVDSIL 308 + + + Sbjct: 291 FELVTPANM 299 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 10/289 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 T+ + + L F+ +K+ + EAK G+ V + S + GD +Q+ +D Sbjct: 35 TADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIV--SDARGDAATQVNQIQDF 92 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 ++ I + P + +PV A + I +V +D + K +F+ +D+V Sbjct: 93 ISRQVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPGK-------SFIASDSV 145 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 A ++++ + G +G ++AI++G+ G R+ G +A K A IK+V+ QPADW Sbjct: 146 AAARTLGNYVVKESGGKG-QLAILQGQIGTTPQVDRQKGFGQALKNAPGIKVVSQQPADW 204 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 + KA V+ ++LQ +P I ++ D MA+G AQAV +G K L+VG DG K Sbjct: 205 AQDKAYSVSQDMLQAHPGIDILWGQADAMALGAAQAVKASGSKKKHLIVGFDGDIAGLKA 264 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 V G + AT+ Q +G + VD K KV P F L Sbjct: 265 VRRGTVDATMVQQTRKMGRMSVNTAVDIIKGKKVPAQQLQPAFLLTSKD 313 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 28/313 (8%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA----SPSEGDFQSQLQL 74 +A + A + KT S+PFW M++G++ A+ LG+ + + GD + Q+ Sbjct: 72 GTATQPWQIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKKQIST 131 Query: 75 FEDLS-NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 +L N + G+ AP S+ LV + +A ++GI ++ +D ID D + FV Sbjct: 132 ILELIDNNDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTD-------QILTFV 184 Query: 134 TTDNVAVGAKGASFIIDKL-----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ- 187 T DN G ++I KL + I+EG + RR G E K+A++ Sbjct: 185 TFDNFEGGQILGEWVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKN 244 Query: 188 --IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVL 245 ++++ + ADW+ KA + L++ P I I A+D MA+G ++AV A K+G ++ Sbjct: 245 YSLEILDLKSADWETKKAKMITQAWLEKFPTIDVIMAADDQMAVGASEAVQEANKSG-II 303 Query: 246 VVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV-------IPLDKA 298 + G DG P ++ GQ+ AT+ Q P + +LM+++ + + I ++ Sbjct: 304 ITGFDGTPYGLNAIKTGQIDATINQLPRTQISLITQLMINSLEKEQTTLPLCQLIGQEQT 363 Query: 299 PEFKLVDSILVTQ 311 L+ + + Sbjct: 364 ENSLLITQDNINE 376 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 15/288 (5%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 V L T + F+ ++K I+++A+ G + D QL +D + Sbjct: 51 SGEKVIGVSLLTREHVFYNLIEKAIQEKAQ--GYKFKPIIMDASQDSNKQLAQVQDFITQ 108 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 I AP +S + V A K GI + +D K + G+V++ V TDN A G Sbjct: 109 KVDAIVLAPTASAGIAPAVDLAKKAGIPVFTIDIKAE--------GDVKSHVATDNYAGG 160 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 A + +K+ G+VAII S R G +A + IK+V + Sbjct: 161 KLAAKYAAEKVLNGKGKVAIITYSE-VQSCVDREKGFKDALAEYPNIKVVDVENCSGSAE 219 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 KA ++ ++L + P++ I+ D A+G + AG+ V V+G DG PEA + ++ Sbjct: 220 KAANLTQDILLKFPDLDLIFAVGDPFAVGAVSTIKAAGR--NVKVIGFDGNPEAIQEIKN 277 Query: 262 -GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G A V Q+P IG + L+ D V P P +VD+ Sbjct: 278 HGLWVADVVQHPDQIGGKVIDLIADYFNGKSVPPQVLIPP-TIVDASN 324 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 131/312 (41%), Gaps = 12/312 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLG-VSV 57 M KYL + V L ++ A + + K+ FW M+ G+E + G + + Sbjct: 1 MKKYLTFLFACWVLLSSGSAWPADNKLNIVFIPKSSDQMFWDLMRNGVERAMQEEGQIDL 60 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 D SQ+++ + + I P LV PV +A + GI +V +D + Sbjct: 61 TWRGPAYNDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDSAL 120 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 D G FVTTDN A G A + + +G G V ++ AG+AS + R G Sbjct: 121 D-------GSGHLQFVTTDNHASGQLAARQLAELMGQRG-RVVLLRTVAGSASTDDRARG 172 Query: 178 ATEAF-KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVA 236 + A I +VA KA A+ +L ++ + AI+ N++ G+ +A+ Sbjct: 173 FIDYLSANAPAISIVADVYGGGSAGKARHSASALLAKSADFDAIFAVNESATDGMLRALR 232 Query: 237 NAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 AG G+ +G D P + +E ++ + Q+P +G +K +V A ++ + Sbjct: 233 EAGLAGRKRFIGFDSTPFLLEGLEKKEIDGLIVQDPDRMGYLAIKAVVAALRNRPIKESV 292 Query: 297 KAPEFKLVDSIL 308 LV Sbjct: 293 IHTGTTLVTRAN 304 >UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3_BACV8 Length = 908 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 17/312 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDI 59 M K+L + L+G++ S S Y V + + + M I EA GV V+I Sbjct: 1 MKKHLLFLILCLMGILTSCSQKHTRYYIGVSQCSDDEWRHKMNHEIVREALFYDGVEVEI 60 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 ++ + ++Q++ ++ + AP + + V +A+ GI +V +D KI Sbjct: 61 RT--AKDNSRNQIEDINYFIDRKVDLLIVAPNEAAAVTPVVEKAYGLGIPVVVIDRKILS 118 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 D AFV DN +G +I+++LG +G ++ I G G+ R G Sbjct: 119 DR-------YTAFVGADNCEIGKDVGQYIVNRLGGKG-KILEITGLEGSTPAMERHRGLA 170 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 +A K I++ AS W + A + ++LQ N I ++ ND MA+G + Sbjct: 171 DALKAEPGIEITASVDGAWLQSVAGEKMDSILQDNKGINLVFAQNDRMAVGAYLSARQRQ 230 Query: 240 KTGKVLVVGTDGIPE---ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 ++L VG D +P + V G + AT G +++ +D + + D Sbjct: 231 LEKEMLFVGIDALPGKGYGVEQVLEGVLDATFIYPTG--GDKVMQVAMDILE-KRPYERD 287 Query: 297 KAPEFKLVDSIL 308 LVD Sbjct: 288 TKLSTALVDKTN 299 >UniRef50_A3N967 Ribose ABC transporter, periplasmic ribose-binding protein n=82 Tax=Proteobacteria RepID=A3N967_BURP6 Length = 320 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 7/295 (2%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS--PSEGDFQSQLQLFE 76 + A+V+K+L+N F++ M+ G ++ K D+ + E D SQ+++ E Sbjct: 30 AETAHKPKVALVMKSLANEFFLTMENGAKEYQKHNASQFDLVTNGIKDETDTASQIRIVE 89 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + I AP S LV V +A GI +VN+D ++D D LK G NV FV D Sbjct: 90 QMIVSKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKGLNV-PFVGPD 148 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N ++ +L A G V I+EG + + R G +A K A K+V+ Q Sbjct: 149 NRKGARMVGDYLAKRLKA-GDAVGIVEGVPTTTNAQQRTAGFQDAMKAA-GAKVVSVQSG 206 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W+ K VA +L PN+KA+ C ND MA+G AV AG+ GKV VVG D I + Sbjct: 207 EWEIDKGNAVAAAMLNEYPNLKALLCGNDNMAIGAVSAVRAAGRQGKVYVVGYDNINAIK 266 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 M++ G++ AT Q A G+ + A + LVT+ Sbjct: 267 PMLKDGRVLATADQYAAKQAVFGIDTALKALA--EHRKQADMTGVVATPVDLVTK 319 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 14/314 (4%) Query: 1 MNKYLKYFSGTLVGLML--STSAFAAAEYAVVLKTLSN-PFWVDMKKGIEDEAKTLGVSV 57 M K + L + SAFAA ++ V +++ +V +K EA +V Sbjct: 1 MKAISKLALACAISLATISTGSAFAADKFVVGYANMADTDVFVMARKNAFIEASKSDPAV 60 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 ++ S + D QL ++ + I P+ +V V +A + GI ++ L Sbjct: 61 EVNFSDANNDVSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIAL---- 116 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 ++ AGG FV + N+ G ++ + L +G ++ +EG G + + R+ G Sbjct: 117 ---GIQSAGGKYT-FVGSKNIDAGRLQGEYMKEHL-PKGAKILYLEGTPGLSHTQERKKG 171 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 +A + S + +AS A++DR + + V + +Q P AI AND MA+G +A+ Sbjct: 172 FEDALGR-SDVTTLASLSANYDRAEGMKVTEDWIQSFPKFDAIVAANDQMALGALEALQG 230 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 A + V++ G DG +A ++AG M+ T+ Q+ A ++ V+ K G+ P +K Sbjct: 231 ADRLKGVMISGVDGTADALNAIKAGTMSQTIFQDAAGQAKAAFEV-VEGLKKGEDAPAEK 289 Query: 298 APEFKLVDSILVTQ 311 F + V Q Sbjct: 290 LVPFASITKDNVGQ 303 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 11/296 (3%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 + AF+A A++ NPF+ G E +AK LG + D Q ++ + Sbjct: 20 TALPAFSADLIAIITPAHDNPFFKAEAVGAEAKAKELGYETLLMTHD--DDANKQSEMID 77 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 + K I + V V +A GI +D +I+ A G A + ++ Sbjct: 78 TAIGRGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREIN------ATGVAVAQIVSN 131 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPA 196 N GA + +G +G + GK + + R G + +K VA Q A Sbjct: 132 NYQGAQLGAQEFVKLMGEKG-NYVELVGKESDTNAGIRSQGYHDVIDDYPDLKSVAKQSA 190 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 +W + +A +LQ NP+IK + NDTMAMG A+ AG+ V+VVG DG + R Sbjct: 191 NWSQTEAYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRK-DVIVVGFDGSNDVR 249 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK-APEFKLVDSILVTQ 311 +++G + ATV Q ++ K+ +K + L+++ + Sbjct: 250 DSIKSGGIKATVLQPAYAQAQLAVEQADAYIKNKTTPKEEKQLMDCVLINADNAGK 305 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 123/334 (36%), Gaps = 35/334 (10%) Query: 1 MNKYLKYFSGTLVGLM-LSTSAFAAA---------------EYAVVLKTLSNPFWVDMKK 44 M K L + L+ + + A + + + FW Sbjct: 1 MKKRFLAAFLCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWY 60 Query: 45 GIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAW 104 G E +AK G + +GD + Q+ + K I AP+ + + + Sbjct: 61 GFEKQAKEYGWEATLL--DPQGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVN 118 Query: 105 KKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEG 164 + G+ + +D + G V + + TDNV G A ++ G + +V II+G Sbjct: 119 EAGVPVFCVDRR--------GEGEVVSTLETDNVKAGEAMAEQLVKDYGED-VDVLIIQG 169 Query: 165 KAGNASGEARRNGATEAFKKASQIKLVASQPA-DWDRIKALDVATNVLQRNPNIKAIYCA 223 + R G +K I +V A ++ AL N L+ NP++ I+ Sbjct: 170 VLSDTPTLDRTQGVKNVLEKYENITIVGEPSAGEYSNEAALATTKNFLETNPDLDVIFTC 229 Query: 224 NDTMAMGVAQAVANAGKTGK------VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGA 277 D + G+ A+ AGKTGK V + DG E K++E G + T +Q P G Sbjct: 230 TDALVPGIVAALKEAGKTGKVGEENHVGIYSVDGAGEVLKLIEDGTVDGTFSQYPIQFGI 289 Query: 278 TGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +K M GKV + D + + Sbjct: 290 DTVKSMKTYLDGGKVEEKVYYNGDVVTD-ENIDK 322 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 14/287 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 ++ T++NPF+ +++ IE+ G + + ++ D Q Q+ + EDL + Sbjct: 68 YKFGFAATTMNNPFFHAIQEAIEEVVDENGDELIVI--DAQNDAQKQISMVEDLLTQGID 125 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + P+ S ++ + + K G+ +VN D + +L V + +DN G Sbjct: 126 LLFLCPIDSASIKSSLEQCGKAGVPVVNFDTDVYDVDL------VNTIIVSDNYYAGELV 179 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A ++ KL EG +V I+ + R+NG + K+V+ D +L Sbjct: 180 AEDMMKKL-PEGSKVCILT-SPSAEACIKRQNGFKDKADGY--FKIVSEIDGKGDTATSL 235 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 +A +VLQ NP++ A Y ND A+G QA+ + KT VLV G DG P ++ + G M Sbjct: 236 GIAEDVLQGNPDLGAFYAINDPSAIGCVQALESQKKT-DVLVYGVDGQPMGKQAISEGTM 294 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 AT AQ+P +IG + V P F L+D VT+ Sbjct: 295 EATAAQSPINIGKESVAAAYKILSGESVEKNILVPTF-LIDKNNVTE 340 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 15/316 (4%) Query: 1 MNKYLKY---FSGTLVGLMLSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 M K L + + + LS + P+ + I++EA Sbjct: 1 MPKLLVFSAYVAIAISAFSLSGCIREKTKKIVGFSQTENIGPWRIAETNSIKEEAAKHKK 60 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + D + ++G Q EDL + I AP L + A I + +D Sbjct: 61 TYDFLITDAQGQTSKQFADIEDLIARQVDVIFLAPREYEGLTPALEAARAAKIPIFLIDR 120 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 + + G + +F+ +D +A G + ++ + + + G AG++ R Sbjct: 121 ----EAAGRPGEHFVSFLGSDFIAQGRRVGEWLAKATDGK-ASIVELTGTAGSSVAIDRA 175 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAMGVAQA 234 G A +K++A+Q AD+ R A+ V N++Q +I A+Y ND MA+G QA Sbjct: 176 KGFRNAIATYPNMKIIATQTADFSRAAAVRVMENIIQAKGSDITAVYAHNDEMALGAIQA 235 Query: 235 VANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + +AG V+V DG A + + G++ +V NP G M + K+ Sbjct: 236 LKSAGMKPGKDVMVGSIDGQKAALEAIIRGELGVSVESNPR-FGPLVFATMEEYFAGKKI 294 Query: 293 IPLDKAPEFKLVDSIL 308 P + +L D Sbjct: 295 PPRIILKD-RLFDVTN 309 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 78/312 (25%), Positives = 123/312 (39%), Gaps = 13/312 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K++ +L +A A V + + F ++ G+ D +K L V + Sbjct: 1 MKKFI----IGAAMSVLLGTAAHAETVGVSMALFDDNFLTVLRNGMLDYSKELK-GVTLQ 55 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ++ D Q ++ I P+ + A I LV ++ + Sbjct: 56 VEDAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNV 115 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + G +AFV +D G A + LG +G I+ G+ N + R A + Sbjct: 116 DSLPDG---QAFVASDETVAGTLEAKEVCRLLGGKG-NAVIMMGELSNQAARMRTQSAKD 171 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 K + I +V Q A+W R + D+ TN L A+ ND MA+G QA+ A Sbjct: 172 VLKTDECKGISVVEEQTANWQRTQGSDLVTNWLSSGIEFNAVIANNDEMAIGAIQALKAA 231 Query: 239 GKTGKVLVV-GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 GK K VV G D +A ++AG + TV Q+ A G L + K K+ Sbjct: 232 GKDMKSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVY 291 Query: 298 APEFKLVDSILV 309 P F+LV V Sbjct: 292 IP-FQLVTPENV 302 >UniRef50_C0CUK5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUK5_9CLOT Length = 336 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 10/295 (3%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL-GVSVDIFASPSEGDFQSQLQ 73 + + + ++K++ F + M G E A + +++ + + Q+Q Sbjct: 46 AQAADPSVKTYNFVFIVKSMQFSFMLSMIDGAEAAAALVPNINIKCIGPETPYSVEEQIQ 105 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 L E I P S +V + +A GI + N K GG+V ++ Sbjct: 106 LVEQAITDGADAILITPADSTGIVPAIEKANAAGIPIAT-------PNTKAYGGDVLTWI 158 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 DN VG + + + + L G +V +IEG AGN++ R +G +AFK I+L+ S Sbjct: 159 GVDNYTVGYELGTALCEALEGTG-KVVLIEGTAGNSTSTERVDGYLDAFKNYPGIELLDS 217 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 QPAD++R K + V N LQR P I + N M MG +A G+ +++ V D Sbjct: 218 QPADFNREKGMTVMENFLQRYPEIDGVGSINKDMTMGAIEACKAVGRDKEMVQVTFDVDN 277 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 + ++AG + T AQ A + + A KV P P LV Sbjct: 278 DCLDAIDAGDILITGAQEEKSQIANAIYACLLACNGYKVAPEQYIP-MTLVTKDN 331 >UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M5H3_CAPOD Length = 934 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 119/311 (38%), Gaps = 16/311 (5%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNP-FWVDMKKGIEDEAKTLGVSVDIF 60 KY F + L+ Y + + S + M + ++ E + ++ Sbjct: 13 RKYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWRQTMNEELKREVALYQANTELL 72 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + D Q+ E + + +P S + +A+++GI ++ +D KI + Sbjct: 73 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 132 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + A+V +N +G + + I L +G +A + G G+ S R G + Sbjct: 133 S-------YTAYVGANNYQIGKEAGHYAIGILKGKG-NIAEVRGTKGSTSDAERHKGFVD 184 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A A ++++VA ++ + A + Q++PNI ++ ND MA G +A Sbjct: 185 ALNNAPEVRIVAETWGNFLKADAKVQMQQLFQQHPNIDLVFAMNDPMAAGTHEAAMQFN- 243 Query: 241 TGKVL-VVGTDGI-PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 GK+ ++G D + E +E A+ G + L + + + Sbjct: 244 -GKIPFIIGVDALQQEGISNIENNVQDASFIYPTG--GEKVIDLAMKIL-HKQPFERENI 299 Query: 299 PEFKLVDSILV 309 +VD V Sbjct: 300 LNTAVVDKSNV 310 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 14/294 (4%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + + L NP+W G+ A+ G+ V I + + Q Q+ DL N Sbjct: 36 AKDPLKIGYSVYDLQNPYWQSYAAGVRAGAEEAGIEVVI--ADQKSSQQEQVSGSLDLIN 93 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + + P+ L + A + I +V D + G+ + ++ ++N Sbjct: 94 QGISALIITPVQPSALPSTIDAAHGEKIPVVVADIGTE--------GDYDGYILSNNYEG 145 Query: 141 GAKGASFIIDKLGAEGG--EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G A +++KLG G +V +IE AG+ GE R +G + + ++V+S + Sbjct: 146 GRLAAEHVVEKLGGTPGPHQVGVIELHAGSVVGEERVSGFVDRLGEEENFEIVSSLDGND 205 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEAR 256 A ++L NP + IY AND A+G ++A+ AG + ++G DG A Sbjct: 206 TVDGGFTAAQDMLSANPELDVIYAANDDSAVGASRAMETAGVSVANGFTLIGFDGSDPAL 265 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 ++E G M+ TVAQ+P G ++ + D+A + +VT Sbjct: 266 DLIEQGVMSGTVAQDPFGQGQKAVETALALLNGEDPGYSDEATKTIYFPVEMVT 319 >UniRef50_A1STY3 Transcriptional regulator, periplasmic binding protein of LacI family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STY3_PSYIN Length = 334 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 98/285 (34%), Positives = 152/285 (53%), Gaps = 3/285 (1%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 A+V+KTL+NPF+ +M++G K LG+++ + + E Q Q+ + DL Sbjct: 51 QDKHTIALVMKTLTNPFFKEMERGARRAEKDLGINLLVKTAAQETSIQQQIGIVADLIEL 110 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + AP SV L+ + A KGI ++N+D +D + KK G F++ DN Sbjct: 111 KVDALVIAPGDSVELIPILKHAQDKGIIVINIDNLLDQEYSKKVGLLNVPFISVDNELAA 170 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 K + +KL + EVAIIEG G + E R+NGA AF ++ LVA++ A+W Sbjct: 171 YKSTKVLTEKLT-QPTEVAIIEGIRGALNAELRKNGAIRAFSESKFATLVATESANWKID 229 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +A ++A + +NPNI AI+CAND MA+GV + + + GK V VV D IP+A V++ Sbjct: 230 EAFELAAKLYNKNPNIGAIFCANDMMALGVIEYLQSTGK-DNVQVVAFDAIPQALNAVQS 288 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 G + ATV Q+ A+ G G+ + K PL E K++ Sbjct: 289 GVLLATVDQDAAEQGYQGILSANNILSGKKT-PLKITIEAKIITK 332 >UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Pasteurellaceae RepID=B0URJ4_HAES2 Length = 311 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 7/306 (2%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L + L + + ++ + ++ + D V I Sbjct: 1 MKKTLLAMLCGGLLLTSQAVIAKNYVIGAPMNSFADKWQTYLQDAVRDF-DEKHDDVQIK 59 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + S D Q+ L ++ ++N + P + A K GI L+ ++ K + + Sbjct: 60 LADSNSDPNIQVNLVQNFIDQNVDALLVVPTDPTVVKRIGVLAKKAGIPLIVVNRKPNDE 119 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 +++ V +FV +D + G +FI++ L + E I+ G G + R G E Sbjct: 120 HMQY----VTSFVGSDEIEGGRIQGNFIVNTLAGKNAESLILLGPLGQDAVTKRTQGNEE 175 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 F + IK+V+ Q W+R + L +A NVL N I I ND MA+G A G Sbjct: 176 IFAQHKNIKVVSKQEGRWERDRGLAIAENVLAGNKGINVIVSNNDEMAIGAILATRKLGI 235 Query: 241 TG-KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 + +VG D P+A + + G + ATV Q+ G TG ++ A K KV + P Sbjct: 236 KDEDITIVGLDATPDALEYLGKG-LDATVFQSAQGQGYTGAEMAYLAAKGEKVPSVKWVP 294 Query: 300 EFKLVD 305 + Sbjct: 295 FELVTP 300 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 86/319 (26%), Positives = 127/319 (39%), Gaps = 27/319 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAA--------------AEYAVVLKTLSNPFWVDMKKGI 46 M K L L + AA V L T +PF++ +K I Sbjct: 1 MKKILLVLVTMLFIFSCGSKDQAAGKTEDKPTETGEKTYTIGVSLLTQQHPFYLSLKDAI 60 Query: 47 EDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK 106 E EA V +++ + D Q+ ED K I +P+ S ++ V +A Sbjct: 61 EKEAAAQNVKLNVSI--ANQDLNKQISDIEDFITKKVDAIIISPVDSKGVLAAVKKAEAA 118 Query: 107 GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKA 166 I ++ +D + G +V A V TDN G + L +G EVA+IE Sbjct: 119 NIPVITVD-------VPAIGVDVAAHVATDNYTGGKIAGEEMARLLNGKG-EVAVIEY-P 169 Query: 167 GNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDT 226 S R G E K IK+VA Q A R +AL A N++Q N N+ I+ D Sbjct: 170 TVDSVVQRIEGFKEVIAKYPDIKIVAIQ-AGITRPEALTAAQNMIQANKNLGGIFGFGDD 228 Query: 227 MAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV-EAGQMTATVAQNPADIGATGLKLMVD 285 A+ AV +AGK ++ V+G DG+ EAR V + A + Q P D+G + + Sbjct: 229 AALAAVAAVKSAGKEDQIKVIGFDGMQEARDAVTKEKSFAAVITQYPEDMGKIAVDTTLK 288 Query: 286 AEKSGKVIPLDKAPEFKLV 304 K +V Sbjct: 289 ILKGEQVEKNIPVTPGIFT 307 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 126/288 (43%), Gaps = 15/288 (5%) Query: 27 YAVVLKTLSNPFWVDMKKGIEDEAKTLGV-SVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 V L LSNPF+V M +G E EAK +G V + S D Q E+ N Sbjct: 62 VGVTLGDLSNPFFVVMAQGAEKEAKKIGGEDVRVTVVSSGYDLNQQFNQIENFVAANTDL 121 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I S + V +A + G ++ +D I+ D ++A VTT+NV G Sbjct: 122 IIINAADSKGIRPAVDQARQAGKVVIAVDTAIEAD--------IDATVTTNNVQAGEISC 173 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQPADWDRIKAL 204 +I D+L +G V I+ G S R +G + K IKL++ Q A+ R L Sbjct: 174 QYIADRLKGKG-NVVIVNGPP-VTSVIQRVDGCLKVLAKYPDIKLLSKDQNAEGSRDGGL 231 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ- 263 V +++L P I A++ ND +GV A A + +VG DG PEA + + +G Sbjct: 232 RVMSDLLVTFPKIDAVFAINDPSGVGVDLAANQAKRQ-DFFIVGVDGAPEAIEAIASGDS 290 Query: 264 -MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 AT QNP + T +++ D K + KL+ V+ Sbjct: 291 LYAATATQNPRGMTQTAIQVGNDILHGKKPESPNILIPAKLITKENVS 338 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 16/317 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTS----AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 MN+ + G M+ + A + L PF+V M I+ EA+ GV+ Sbjct: 21 MNRREFLLTSVAAGAMVLAAPSVFAEDKLTILGSVPNLGFPFFVHMLNEIKAEAQAQGVN 80 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + S + Q E + I +PL L + A K G+ +V +D + Sbjct: 81 LT--ESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGVPVVTIDRR 138 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 +D + A V DNV G AS ++ G ++ ++G+ G R Sbjct: 139 VDGVQ------GILAHVGADNVKGGEAEASAMVAAF-PNGAKLFHLQGQPGAGPAIDRNK 191 Query: 177 GATEAFKKASQ-IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G +++ Q A++ R +AL V L N AI CAND MA+G +A Sbjct: 192 GVHNVLDPLKDKYQIIFEQTANFARAEALSVTEAGLAANGKPDAIICANDDMALGALEAC 251 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 A T V + G D +PEA V G++ TV Q P T +++ V K+ Sbjct: 252 AARNFT-DVKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAVAYAKNKTEPKE 310 Query: 296 D-KAPEFKLVDSILVTQ 311 ++ + + Sbjct: 311 KLVLLTPIVIGKDNLDK 327 >UniRef50_D2QME7 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QME7_9SPHI Length = 940 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 105/300 (35%), Gaps = 15/300 (5%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 + S + T + + M ++ E + + +E Q+ Sbjct: 38 MAGCQSATKTKTYRIGFSQCTGGDEWRKTMLHDMKRELT-FHPNYTLLYEDAENSTTRQI 96 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 + L ++ + +P + +K+GI ++ LD KI+ ++ A+ Sbjct: 97 SQIQALIDQGIDLLIVSPNEVAPFAKVIEDVFKRGIPVILLDRKIETES-------YNAY 149 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 + DNV +G FI + L +G + I G ++ + R G E +K I++V Sbjct: 150 IGGDNVEIGRLAGVFIGNHLKGKG-RIVEIWGLPSSSPAQERHRGLLEELRKYPGIQVVK 208 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 W+R V L ++ ++ ND MA+G G K+ VG D + Sbjct: 209 ELNGQWERDTVGRVVAAELNTLKDVDLVFAHNDVMALGAYAVCKQKGIEKKLDFVGIDAL 268 Query: 253 P---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 P + + G + A+ G ++ V ++ +D V Sbjct: 269 PGPNAGMQAITDGILKASFLYPTG--GEEAIETATRILAGKSV-KREQVLNSIQIDGSNV 325 >UniRef50_C6L1I6 ABC sugar transport system, periplasmic protein n=1 Tax=uncultured bacterium RepID=C6L1I6_9BACT Length = 324 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 171/304 (56%), Gaps = 2/304 (0%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 K L+ T A A EY V++KTL+NPFW M +G+E A+ GV+ + A Sbjct: 5 KTTLKLGAAFATLLAVTPAMADGEYGVLMKTLANPFWGAMGQGVEAGAQEAGVAYYMQAV 64 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 S+ + QL + + +N + A ++S NL+ + A GI +V+LD +D L Sbjct: 65 ESDQAAEPQLNVCNTMLERNPVAMITAAINSTNLLPCLKSAQDAGIKVVDLDGNLDQAIL 124 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG-GEVAIIEGKAGNASGEARRNGATEA 181 G + + +DNV GA+GA +++ +LGA+ G V +IEG +GN +G+ R +G + Sbjct: 125 DAEGIEITFRIGSDNVLAGAQGAEYVVSQLGADATGPVLVIEGLSGNITGQKRASGFADK 184 Query: 182 FKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 + A +++VAS P DWDR KA ++ ++L RNP + AI+ AND MA+G ++V AGK Sbjct: 185 LAELAPGLEIVASLPGDWDRGKAANITNDILTRNPGLVAIFAANDGMALGAVESVFAAGK 244 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 G+V++VG DG +A K + G++TA+VAQ P +G ++ + A + G+V P Sbjct: 245 GGEVIIVGVDGNSDAVKSINEGRLTASVAQLPYLVGKQAVENVKIAVEGGEVAKEIIVPT 304 Query: 301 FKLV 304 L Sbjct: 305 LVLT 308 >UniRef50_C6D2L0 Periplasmic binding protein/LacI transcriptional regulator n=10 Tax=Bacteria RepID=C6D2L0_PAESJ Length = 333 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 84/332 (25%), Positives = 134/332 (40%), Gaps = 31/332 (9%) Query: 1 MNKYLKYFSGTLVGL-MLSTSAFA--------------------AAEYAVVLKTLSNPFW 39 M K+ L+ + MLS ++ K + FW Sbjct: 1 MKKFTALLVVALMTVVMLSACGSNNSDGSSKSGTDNGGTKASGDKIYIPIISKGFQHQFW 60 Query: 40 VDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMP 99 +K G E A V + +E Q+++ + +K I FA L S V Sbjct: 61 QAVKAGAEKAATEFNVEITFEGPETEAQVDKQIEMLQAALDKKPSAIGFAALDSQASVPL 120 Query: 100 VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEV 159 + +A GI ++ D +D D T+NVA A A + + +G EG E+ Sbjct: 121 LQKAKAAGIPVIAFDSGVDSDIPITTAS-------TNNVAAAALAADKMAELIGGEG-EI 172 Query: 160 AIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIK 218 +I + +G RR+G K K IK+V Q D +K+ D+A ++Q +PNIK Sbjct: 173 GVIVHDQTSVTGVDRRDGFVNRIKEKYPNIKIVDIQYGGGDHLKSTDLAKAMIQAHPNIK 232 Query: 219 AIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGAT 278 + +N+ A+GV AV K G++ V+G D +++G M + QNP IG Sbjct: 233 GFFGSNEGSAVGVINAVTELKKEGQITVIGFDSGKAQIDAIKSGVMAGAITQNPVGIGYE 292 Query: 279 GLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 +K V+A + KV F D + Sbjct: 293 TVKAAVEAIRGEKVE-STIDTGFYYYDKSNID 323 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 18/303 (5%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIE---DEAKTLGVSVDI--FASPSEGDFQ 69 L + V K N +W +K+G E + K G ++ + ++ EGD Q Sbjct: 61 LGAMPKVEGEIKLGSVAKAFENEYWRTLKEGEELGTQKFKENGYNITLDMKSAQGEGDEQ 120 Query: 70 SQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNV 129 QL + ED+ NK Y + +P+S NLV V +A K I ++N+++ I N Sbjct: 121 GQLSIVEDMINKKYTALLLSPISDGNLVPGVEKAKKNNIPVINVNDGI--------IKNA 172 Query: 130 EAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQI 188 + FV + G A +I K+G EG EVAI+ G + R G K A+ + Sbjct: 173 DIFVGPKAIMNGELAAEWISKKIGGEG-EVAIVIGMPKAFAARQRTLGFENWMKSNAAGV 231 Query: 189 KLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVG 248 K+V Q ADWDR KA D+A +++ PN+KAI+C ND MA+GV +AV + + +LVVG Sbjct: 232 KIVEKQNADWDRAKAKDLAEIWIKKYPNLKAIFCNNDVMALGVQEAVNASKR--DILVVG 289 Query: 249 TDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 DGI EA + + G+M ATV P G +++ + + G+ +P L+DS Sbjct: 290 VDGIKEAYESIRKGEMDATVDSFPLYKGQIAVEMALRSL-GGQQLPRVIWTPQALIDSTN 348 Query: 309 VTQ 311 V + Sbjct: 349 VNE 351 >UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D2PNL9_9ACTO Length = 335 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 13/292 (4%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 A + ++ P+ M I+ A + ++ + + D Q+ E+ Sbjct: 42 GADGKYVIGMSQANVAEPYRQRMDDDIKAAAAEV-PQFEVKFADAAQDNAKQVADVENYI 100 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + + +P + L V +A+ +GI ++ LD K++ D F+ DNV Sbjct: 101 TQQIDLLIISPNEAKPLTAVVKKAYDQGIPVLVLDRKVEGDA-------YTGFIGGDNVQ 153 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 +G + ++ +K+ GG V I+G AG R G K ++K+VA+ DW Sbjct: 154 IGTEAGKYVAEKVLPNGGNVVEIKGLAGATPQAERNQGFATGIKANPKVKVVATASGDWL 213 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP---EAR 256 R K +L+ NP I +Y ND MA G A G+ ++ +G D +P Sbjct: 214 REKGQAQMDALLKANPKIDVVYAHNDPMAEGAYLAAKAVGREKEMKFIGIDALPIPSGGI 273 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 K VE G++TAT G + I + +L+D Sbjct: 274 KAVEQGRLTATFTYPTN--GKEAIAAAKKLLVDCGTIEKTQTLPTRLIDKTN 323 >UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Proteobacteria RepID=MOCB_RHIME Length = 309 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 123/311 (39%), Gaps = 12/311 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K++ + +L ++A A + + F ++ G+ED AKTL VD+ Sbjct: 1 MKKFI----IGIAAAVLVSTAAHAETIGASMAVFDDKFGTLLRNGMEDYAKTL-DGVDLQ 55 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + D Q ++ I P+ + + A GI LV ++ + Sbjct: 56 IEDALNDVAKQQSQIQNFIAAGVDAIIVQPVDTDATTVMSKLAADAGIPLVYVNREPVNI 115 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + +AFV ++ V G I L +G + +I G+ N + R + Sbjct: 116 DTLPEK---QAFVASNEVDSGTLQTREICKLLDGKG-KAVVIMGELSNQAARMRTKDIHD 171 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + I++V Q A+W R + D+ TN L A+ ND MA+G QA+ A Sbjct: 172 VLATDQCKGIEIVQEQTANWQRTQGADLMTNWLSAGIEFDAVIANNDEMAIGAIQALKAA 231 Query: 239 GKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G++ V++ G D +A + AG++ +V Q+ G + + K V Sbjct: 232 GRSMDSVVIGGIDATDDALAAMAAGELDVSVFQDAVGQGKGSIDAALKLSKGEAVERKIY 291 Query: 298 APEFKLVDSIL 308 P + + L Sbjct: 292 IPFELVTKANL 302 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 25/322 (7%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAA----------AEYAVVLKTLSNPFWVDMKKGIEDEAK 51 + + TL L L+ + + ++++ +SNPF+ M KG ++ A Sbjct: 7 KSAVFTAAVTLAALSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAA 66 Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 ++G + + ++ D +Q + + I + + + + RA + GI ++ Sbjct: 67 SIGATANTQ--DAQLDLANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVI 124 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASG 171 +D +A V TD V G K ++ +++G +G V +++G + Sbjct: 125 AVDTPAKS---------ADAVVMTDAVQAGEKSCQYLFEQMGGKG-NVLLVDGTP-LQTI 173 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 R G KK IK+V Q + DR L V T++L P+++ I+ ND A+G Sbjct: 174 RDRITGCNNVVKKFPGIKVVGQQASKNDRASGLAVTTDMLTATPDVQGIFGMNDPSALGA 233 Query: 232 AQAVANAGKTGKVLVVGTDGIPEARKMVE-AGQ-MTATVAQNPADIGATGLKLMVDAEKS 289 AV A K G V V G DG PEA ++ +G T QNPA++ +++ + + Sbjct: 234 VLAVQQAHKAGTVKVTGVDGSPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVAQNIIDN 293 Query: 290 GKVIPLDKAPEFKLVDSILVTQ 311 +LV V+Q Sbjct: 294 KPPAETTILIPSELVTRDTVSQ 315 >UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacteria RepID=B2T1S7_BURPP Length = 339 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 126/294 (42%), Gaps = 8/294 (2%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 ++ + +NP+ + K +D A G + + + Q+ +++ Sbjct: 46 ASKTPLKVGFAQTESNNPWRLAETKSFKDIAAKCGWQL--VMTDANSSNSKQVSDIQNMI 103 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 ++ + F P L V +A K GI ++ +D +D K AG + F+ +D + Sbjct: 104 AQHVDLLVFPPREEKPLAPVVLQAKKAGIPVILVDRDVDQSVAK-AGRDYITFIGSDFID 162 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 G + A +++ G + ++ +EG G ++ R+ G E K + ++ASQ D+ Sbjct: 163 QGHRAADWLVKATGGK-AKIIELEGTTGASAANDRKKGFDEIIAKNPGMTIIASQSGDFA 221 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARK 257 R K V +LQ +P++ A+Y ND MA+G A+ AGK + +V DG Sbjct: 222 RDKGRQVMETLLQAHPDVTAVYAHNDEMALGAIAAIKAAGKQPGKDIQIVTIDGTKGGMD 281 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + AG++ A+V +P G + K K+ P K D V Q Sbjct: 282 AIAAGELGASVQSSPF-FGPLACDVAQRYAKGEKI-PTWVKVSDKFYDKSNVQQ 333 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 124/294 (42%), Gaps = 12/294 (4%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 ++ AE +V+++T N F + ++ + + I S+ D +Q+ E+ Sbjct: 60 GGTSGEPAEVSVIIETFDNTFASFVMNAMKKYEEEHKDKIHITYLDSKQDANTQISQVEN 119 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 + I + + V + G+ L+ + + N ++FV D Sbjct: 120 QILNGTQAIICLAVDAKQSEPIVRACKEAGVPLIAFNRIFE---------NCDSFVGADG 170 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPA 196 G+ A F +K G +G VAI+ G G + RR+ E + +++V Sbjct: 171 AVAGSLLARFTGEKTGGKG-NVAIVNGIMGQENQFIRRDAIVETLGEMYPDMQVVIEGAG 229 Query: 197 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEAR 256 DW R KAL + LQ +I AI C ND MAMG AV AGK+ ++V G +G P+ Sbjct: 230 DWKRDKALQLVETWLQSGTDIDAILCLNDDMAMGTQLAVEQAGKSDDIIVCGVNGDPDGI 289 Query: 257 KMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 V G++ ATV QNP L+ + K P F+LV + V Sbjct: 290 NAVRDGKIAATVFQNPDRQAEEALEAALQYIHGEKPESKIMIP-FELVTADNVD 342 >UniRef50_B5YA80 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YA80_DICT6 Length = 338 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 11/308 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L L L+ S AV+ K++ +P+W +++ G++ AK LGV F Sbjct: 1 MRKILVAILIILFPLIFSIGYSKEIHVAVIGKSV-HPYWAEVELGVKQAAKDLGVKATFF 59 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 E D +Q+ E GIA AP + + +A KGI ++ LD Sbjct: 60 VPQKE-DIPAQISQMESFIAMGVDGIAIAPSDPTAIAPTIEKAMAKGIPVITLDTDA--- 115 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 ++ TDN + G + D LG +GG+VAI G + R G + Sbjct: 116 ----PQSKRLVYIGTDNYSAGKIAGMVMNDLLGIKGGKVAIGTGSLTAMNSLERIRGFMD 171 Query: 181 AFKKASQIKLVASQP-ADW-DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 +I +V D+ D +A+ +A L P+++ + A+AV A Sbjct: 172 GIASNKRIVVVTKPALCDFEDTGRAVTLAEQALLTYPDLRGFFGVYAFNGPAAAKAVKAA 231 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 GK G+VL+V D E ++++ G ++ATV Q P +G ++++ + G L + Sbjct: 232 GKVGQVLIVCFDTTAEHMQLIKEGVISATVGQRPYMMGYKSVEVLTKMAQKGVDATLKEL 291 Query: 299 PEFKLVDS 306 P +++D+ Sbjct: 292 PANRIIDT 299 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 14/291 (4%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 ++ T++NPF+ ++K I E + G + D Q+ D+ + Sbjct: 38 KKKHKFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQLITM--DPAMDVSKQIDQINDMITQ 95 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + + P+ + + K I ++N D ++ N V A+V +DN G Sbjct: 96 GVEAVFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNY------VTAYVGSDNKNAG 149 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 ++ + GG++AI+ S R G A + +VA Q D Sbjct: 150 KVCGDDLVKRY-PNGGKIAILNC-PTMNSINDRIAGFKSAI-EGKNFTIVAEQDGKGDLQ 206 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 ++ +A ++LQ + +I AI ND A+G A +A K K+L+ G DG P+A+K + + Sbjct: 207 TSMKLADDILQSHSDIVAIMGGNDPTALGALAACKSA-KQSKILIYGVDGSPDAKKEIAS 265 Query: 262 -GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 GQ T AQ+P IG +L V F L++ V++ Sbjct: 266 GGQFVGTGAQSPKQIGVKSAELGYKVLNKQNVEKKTPVQTF-LINKDNVSK 315 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 14/315 (4%) Query: 1 MNKYLKYFSGTLVGL-MLSTSAFAAAE--YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 M + VG+ +L++ A A + ++++ SNP+W K E+ A+ LG Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEA 62 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 D+ S +GD ++ + + + I P ++ + V +A + GI + ++ +I Sbjct: 63 DV--SSHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEI 120 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 + G EA + ++N A GA I +G + ++G + + R NG Sbjct: 121 NQQ------GLAEAQLVSNNAQGAALGAQQWIKSVG-DSARYVELKGAPSDNNAATRSNG 173 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 + ++ V S A+WDR + + ++LQ NP+I + ND MA+G A+ Sbjct: 174 YETVLSQYPGLEKVGSDVANWDRTQGFNKTQSMLQANPDIDGVISGNDEMALGAISALKE 233 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK--VIPL 295 AGK V+V G DG P+A + V+AG+M TV Q A +++ +G+ V Sbjct: 234 AGKLDDVVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMADKYVTTGETGVDGE 293 Query: 296 DKAPEFKLVDSILVT 310 + + L+ S V Sbjct: 294 KQLFDCFLITSDNVD 308 >UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K631_BACHD Length = 327 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 116/293 (39%), Gaps = 11/293 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 ++ F + G++ +V++ +E D Q+ EDL Sbjct: 40 AGDDGKMVIGFAHPDFNDMFLGFLLAGVQAYEAEQ-TNVEVVYVDAENDSDGQIAQVEDL 98 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + I P+ + V RA + G+ +V ++ +A+V +D++ Sbjct: 99 IAQGVDAIMAIPVDLIATEFIVDRAQQAGVPVVLINRDSVERE--------DAYVGSDSL 150 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G + L +G ++AI+ G+ G+ + R G + + +++V W Sbjct: 151 QAGTIQMEEVAAVLKGKG-KIAIMNGQMGHTAQINRTLGNKQVVDQYPGMEVVIEGTGGW 209 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 R K ++ + ++ A+ ND MA+G A AG +++ G DG P+A Sbjct: 210 SREKGKELMESWIESGQTFDAVVANNDEMAIGAIMAAEEAGIVDELVFAGIDGTPDALDY 269 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + G++T +V Q+ G TGL+ + K + P ++ + V + Sbjct: 270 MSKGKLTISVFQDAKGQGQTGLEQAIKLAKGESAEKMTNIP-YETITKRNVDE 321 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 139/324 (42%), Gaps = 21/324 (6%) Query: 1 MNKYLKYFSGTLVGLMLS-----------TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDE 49 M K + ++ S E A+V K S FWV + +G +D Sbjct: 1 MKKSKYIALAAVAAFTVAPLSACGAGQSNGSESKNYEIAMVAKGFSQSFWVSVHQGADDA 60 Query: 50 AKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIY 109 A G +V ++ Q + ++ NK+ +A APL L V A I Sbjct: 61 AAKYGATVTFNGPDNDSQVDKQADMVQNAINKSPDAVAIAPLDEAALTPAVQSAKSASIP 120 Query: 110 LVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNA 169 L D + + + + V T N VG A +I L +G + A+I +A Sbjct: 121 LFAFDTAFETNADA-----ITSTVKTSNREVGKVAAENLIALLNGKG-KYAVIAHSQTDA 174 Query: 170 SGEARRNGATEAFKKA-SQIKLVAS-QPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 + RR+G + KK +++V Q ++ D+ KA D+A+ +LQ NP++ AI+ N+ Sbjct: 175 TSTERRDGFLDYMKKNAPDMEMVGEVQYSNADQAKAQDIASAILQANPDLDAIFATNEAT 234 Query: 228 AMGVAQAVANAGKTG-KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 +G A V +A K+G KVL+VG D ++ + G ++ +V+QNP IG ++ V + Sbjct: 235 VVGAATPVESALKSGHKVLLVGVDSGKAQQQYIRDGVISGSVSQNPYQIGYKTIENAVKS 294 Query: 287 EKSGKVIPLDKAPEFKLVDSILVT 310 K+ ++ + Sbjct: 295 LNGEKIDK-VIDSGCFWYNADNID 317 >UniRef50_C1D9L7 RbsB protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9L7_LARHH Length = 330 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 93/329 (28%), Positives = 161/329 (48%), Gaps = 29/329 (8%) Query: 2 NKYLKYFSGTLVGLMLSTSA-------------------FAAAEYAVVLKTLSNPFWVDM 42 K G L GL+ + + + A +V+K+ +NP++ ++ Sbjct: 4 KKRGWLVIGVLCGLVACSESIPRVDNRSHSAFSQSAGQNTSPARIVLVMKSPTNPYFSEL 63 Query: 43 KKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN-YKGIAFAPLSSVNLVMPVA 101 G G+ + I + + + Q++L +++ K+ I AP S+ LV +A Sbjct: 64 ANGASRAQLETGIDLSIKVAHEDDALEQQIRLIDEVIAKHQADAIVIAPTDSIRLVPVLA 123 Query: 102 RAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAI 161 RA K GI+++N+ +++ + G V ++ DN + + A + + L G +VAI Sbjct: 124 RARKAGIHVINIGNRLEPRIVALYGMPVVPLISIDNASAAYQVAGKLAEGL-PRGSKVAI 182 Query: 162 IEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIY 221 IEG G + R GA +AF +A +++VA Q A W +A V +L+ P+++AI+ Sbjct: 183 IEGLLGTNNTRQRTEGALQAFSEA-GLRVVAKQSARWKGDEAYQVTAQLLRDYPDLRAIF 241 Query: 222 CANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLK 281 C+ND MA+G A+ + G TG V + G DGI EAR + Q+ AT+ Q+ ++ G ++ Sbjct: 242 CSNDMMALGAARYLREKGITG-VRLAGFDGITEARSALHQRQLVATIDQHASEQGYLAVR 300 Query: 282 LMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 L VDA E LVD+ L+T Sbjct: 301 LAVDAIAG------RPLAEETLVDTELLT 323 >UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Tax=Bacteria RepID=A9GMT2_SORC5 Length = 340 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 13/288 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 AVV K ++ FW + G ++ L V V E D ++Q+ + + G Sbjct: 42 RIAVVPKGTTHEFWKSVHAGAVKASRELDVDVVWKGPLREDDLKAQVDVVSSFVAQGVSG 101 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I APL + L PV A + I +V D + D+ +FV TDN A G Sbjct: 102 IVLAPLDATALRAPVRAARQAKIPVVVFDSDLASDDH-------VSFVATDNEAAGRLAG 154 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS-QPADWDRIKAL 204 + +G +G +V ++ + G+AS + R G +A + + + + Q A Sbjct: 155 EHLGKAIGEDG-KVVVLRYQEGSASTQHREKGFLDAVRAMPGVTVASENQYGGATTESAF 213 Query: 205 DVATNVL----QRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 + ++L I ++ N++ G+ QA+ KV VG D + + Sbjct: 214 HKSESLLLAQRAAEGAIAGVFTPNESTTFGMLQALRKTNVARKVKFVGFDASEKLLGALR 273 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G + A V QNP ++G +K MV KV + L Sbjct: 274 EGDIEALVVQNPFNMGYVAVKTMVAHLHGEKVAARIDTGSRVVTRQDL 321 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 119/295 (40%), Gaps = 13/295 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAA----AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 M + + V L S + A + +P + M KG E A G Sbjct: 6 MGRRIVLGLIASVALAGSLAVPAQAQEMKTIGWSVAYFDHPVYQLMMKGAEKVADEAGCK 65 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 V + + D Q ++ + GI P S L+ V + GI LV D + Sbjct: 66 VIF--ADGKDDPSVQASHIDNFIAQGVDGIILTPTVSDPLIPAVKKVNDAGIPLVMADRR 123 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 + EA V+ D V G G + +G +G + ++EG G S R N Sbjct: 124 MQTHGQPI---KWEALVSWDMVKSGTIGGEQTVKAIGGKG-NIVVVEGTPGAGSTIDRGN 179 Query: 177 GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP--NIKAIYCANDTMAMGVAQA 234 E +K IK++A PA+++R K +V N+LQR I AIY D M G QA Sbjct: 180 AFYEVIEKYPDIKILAKIPANFNRAKGQEVTENILQRFKPGEIDAIYYMADEMTFGGLQA 239 Query: 235 VANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 + AG+ G+ ++ DG EA ++ A ++ +P D ++++ D Sbjct: 240 IKAAGRLGEFKIISVDGQKEAMDLLRAREIDYEAIFHPDDQA-VAVRILCDIVNG 293 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 138/320 (43%), Gaps = 21/320 (6%) Query: 1 MNK---YLKYFSGTLVGLMLSTSAF-----AAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 M K + + L S +A A V + S P +V +++ +E EAKT Sbjct: 1 MRKVTYLMTTLAIALSTFAFSANAAPKGKDAPVTILVSALSYSFPHFVFLQEQLEAEAKT 60 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 LG +V I S + Q+ E + GI AP + L + A K+GI +V Sbjct: 61 LG-NVKIIRSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVT 119 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 +D ++ V A V DN+ + ++KL +G + ++G G+ + Sbjct: 120 IDRPVNG------VPEVIANVAADNLIGAQRQGEA-VEKLFPQGATIINLQGIPGDKTAN 172 Query: 173 ARRNGATEAFKKASQI-KLVASQPADWDRIKALDVATNVLQ--RNPNIKAIYCANDTMAM 229 R G + K ++ K VA Q A ++R + L V N+L NP I ND A+ Sbjct: 173 DRSKGVHDTLDKHPELYKFVAEQTARFNRDQGLSVTENLLTGLANPP-TVIVAGNDDSAL 231 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G AQAV G GK+ + G DG +A K V G +T TV Q P G +K++ D ++ Sbjct: 232 GAAQAVEARGLKGKIAIFGYDGSTDALKAVRDGVLTGTVDQYPGKQGREAVKILTDYIRT 291 Query: 290 G-KVIPLDKAPEFKLVDSIL 308 G + +D + S Sbjct: 292 GARPATVDVLVSPVAITSKN 311 >UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B2IJW8_BEII9 Length = 314 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 118/312 (37%), Gaps = 12/312 (3%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 +K V + + + A V + + F ++ + ++L +V++ + Sbjct: 1 MKRILLAAVMAINFSCSAGAESIGVSMSAFDDNFLTVLRNALIAHGQSL-PNVNVQMEDA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 + D Q ++ I P+ + A + LV ++ + + Sbjct: 60 QNDVARQQSQVQNFIASGVSAIIVNPVDTDATEAISKLAADAKVPLVYVNRQPANVDRLP 119 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLG----AEGGEVAIIEGKAGNASGEARRNGATE 180 +AF+ +D G A + L + V ++ G+ N + R + Sbjct: 120 ET---QAFIASDEAVSGTLQAQEVCRLLKARGKGKSANVVVMMGQLSNQASRQRTKDVHD 176 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + + +K+V Q A+W R +A+++ +N L A+ D MA+G QA+ +A Sbjct: 177 VIATPECAFMKVVEEQTANWQRTEAMNLMSNWLSAGIQFDAVIANADEMAIGAIQAMRSA 236 Query: 239 GKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G +V G DG + +++ G + TV Q+ A GA L + + K Sbjct: 237 GLPVKDYIVAGIDGGRDGIELMRQGYLDVTVFQDAAGQGAGALDTALMLARGKKT-DRTI 295 Query: 298 APEFKLVDSILV 309 F+L+ V Sbjct: 296 WVPFQLITPTNV 307 >UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TPE5_ACIAC Length = 322 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 64/317 (20%), Positives = 122/317 (38%), Gaps = 20/317 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSA-------FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL 53 M K + T + + + + + I+ A+ Sbjct: 1 MTKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDA 60 Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 G+ + S ++ ++Q++ + IAF+P+ + A I +V Sbjct: 61 GIELKF--SDAQQKQENQIKAIRSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLT 118 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG--EVAIIEGKAGNASG 171 D ++ + F+ +D V G K ++++K+ G + ++G G+A Sbjct: 119 DRAVNTKDT----SLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDVNIVELQGTVGSAPA 174 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQR-NPNIKAIYCANDTMAMG 230 R+ G E K + K++ SQ D+ R K +V L+ I +Y ND MA+G Sbjct: 175 IDRKKGFEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIG 234 Query: 231 VAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 QA+ AG + ++ D + A + + AG++ TV +P +G L V K Sbjct: 235 AIQAIEEAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSP-LLGPQ-LMAAVKDIK 292 Query: 289 SGKVIPLDKAPEFKLVD 305 +GK +P E + Sbjct: 293 AGKTVPKRIVTEEGIFP 309 >UniRef50_C1TNC1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Synergistaceae RepID=C1TNC1_9BACT Length = 338 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 162/289 (56%), Gaps = 3/289 (1%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 V++ TLSNP+WV MK+ + AK +G+SV++ A+P+E D +SQL E + K Sbjct: 48 GQERIGVLVITLSNPYWVTMKERYGEWAKEMGISVEVMAAPTEKDLKSQLNTLEAMVAKK 107 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 Y GI P+ NL+ + +A +KGI +V ++ D LK+AG ++ ++T G Sbjct: 108 YDGIIVTPMDPFNLIPGIVKADEKGIPVVCSGPEVSRDGLKQAGAVMDGWITATFKDQGR 167 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 A + +KL G EVAIIEG G +ARR GA+E F+KA +KLVA + +WDR + Sbjct: 168 LCAEDMAEKL-PSGSEVAIIEGIPGAGQSKARREGASEGFEKA-GLKLVAVEAGNWDRNR 225 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A D+ TN+++ +P +K IYCAND MA+ A+ AG G V V GTD IPEA + +++G Sbjct: 226 AYDITTNLVKAHPQLKGIYCANDVMALAAVDALEVAGIEG-VTVYGTDFIPEAAEAIKSG 284 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++ + + A L + K + +P + LV+ + Q Sbjct: 285 RLAGSTTFSQAAWTRGTLVYTLKLIKKDEDLPEKLSVPITLVNGENIGQ 333 >UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasmic component) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C460_9PLAN Length = 321 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 10/293 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 ++A + + +T++NPF+VD+ +G++ E + G + I ++ + Q DL Sbjct: 34 STADSGRLFGASFQTMNNPFFVDLGEGLKKELEANGDRLVIL--DAQFNSLKQKNDLSDL 91 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 +N GI P++ L + A +K + ++ +D + + + + V +DNV Sbjct: 92 ILQNVAGIFVNPVNWEGLKGSLLEANRKKVPIIIVDAPVKKADEE----LIVCTVASDNV 147 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G A + + + V + + N + R G +K ++K++ Q A Sbjct: 148 RAGELAAQALAK-VNPKARLVVL--HLSVNKACIDRVAGFKTELEKHPEMKILDVQEAQG 204 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 A V +++ R P++ A++ ND A+GV A+ +A K +V +V DG K Sbjct: 205 TTEGARPVMRDLIGRYPDLDAVFAINDPNALGVISALDSANKLDQVTIVTVDGSQAGIKA 264 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++AG++ +T AQ P +IG + M+ K V D +L+ + Q Sbjct: 265 IQAGKLHSTSAQFPREIGKIAAEKMLAHLKGEPVEK-DVKVRVELITAENAEQ 316 >UniRef50_A8RQW7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQW7_9CLOT Length = 354 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 117/288 (40%), Gaps = 9/288 (3%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 A AV+ K+L +W ++ G + G ++D + ++ D + Q++L ED + Sbjct: 61 AEKVIAVIPKSLLFDYWQYVRIGAQSAGLDEGYAIDFQGTRTDTDLEGQVKLVEDFIQRG 120 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 I +P++ +V + +A GI ++ +D K++ D + + V+T++ A G Sbjct: 121 VSAIVISPVNPDGMVPVLQQAEDAGIPVIIMDGKLNADFPR-------STVSTNDEAAGK 173 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 A + + G GG AI+ G R G ++ K++ + DR + Sbjct: 174 FAAEKLKELAGDAGGTFAIVSAVPGAVQEGGREKGFSDELGTYPNYKIIGTYYGKGDRNQ 233 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 ++ ++L NP+I Y N+ + GV V K+ V D E + G Sbjct: 234 TYNITQDILTSNPDITGFYTVNEGSSAGVTLGVREGDLKEKI-FVAFDPSTEVLDAIRDG 292 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + VAQNP IG T + + V P V + Sbjct: 293 YVDGAVAQNPYLIGRTAVLNAIKVLNGETVEKKIDVP-VTWVTIDNLD 339 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 13/294 (4%) Query: 17 LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFE 76 S+ + A + +L PFW MK GIED+AK V + S+ + +QL + Sbjct: 46 ASSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKDNANTQLANVQ 105 Query: 77 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTD 136 D GI +P S + + ++ A + GI +V D D G +F++TD Sbjct: 106 DAITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTDS-------GEYVSFISTD 158 Query: 137 NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA-SQP 195 N K ++ DKL +G E+A I +G R+ G E K+ ++K V Q Sbjct: 159 NSGGAKKLGEYVADKLN-KGDEIAQIALNQARKNGVLRKEGFEEGIKE--KLKEVDFRQM 215 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 +R + + +++ PN+K I+C ++ +MG A+ K +VG D PE Sbjct: 216 EKVNRDEGVRYTQDLITSYPNLKCIFCHSEDPSMGAVTALKEIN-NDKCKIVGFDCSPEV 274 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 + +++G + AT AQ P +G T + + G + + + LV + Sbjct: 275 VEAIKSGDILATAAQQPVFMGRTAVDCLKTHLDGGT-PEKEISVDTLLVTQDNI 327 >UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional regulator n=60 Tax=Proteobacteria RepID=B2ILF2_BEII9 Length = 333 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 120/312 (38%), Gaps = 14/312 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L S LV M + A V + +L N ++V + + E +AK + V + Sbjct: 23 MIKQLLMGSAILVLAMGAAGAKDLKSVGVSVGSLGNLYFVALSQSAEAKAKEINPDVKVI 82 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S D Q ++ I A + + RA GI ++ D Sbjct: 83 TVDSNYDLNKQFNQIDNFIASGVDLILLAAADPKAIAPAIKRAQNAGIVVMATD------ 136 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 A +A V T+NV G +I+DKLGA GG++ I G +S R +G + Sbjct: 137 ---VAAVGADATVQTNNVQAGEIACQYIVDKLGAAGGQIIIQNGPQ-ISSIIDRVSGCRK 192 Query: 181 AFKKASQIKLV-ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 + +I ++ Q R + + + L R+ I A++ D A G A G Sbjct: 193 SLANNPKITILSDDQNGKCSRDEGMKIMQGHLTRHRKIDAVFTVCDPQATGSDLAAQQFG 252 Query: 240 KTGKVLVVGTDGIPEARKMVEAG--QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 + + + DG P+ K + G ++ A+ +Q+P + +++ + K Sbjct: 253 R-NEFFIASVDGAPDIEKAFKGGNTRIQASASQDPYGMAQQAVQIGYEIMNGKKPDNPMI 311 Query: 298 APEFKLVDSILV 309 L+ V Sbjct: 312 LMPSTLLTKDNV 323 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 13/304 (4%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 K L + V L + A +A L T +PF++ + ++ EA+ V +++ Sbjct: 3 RKSLSRILFSGVALAMMAGAASAEGIGASLLTQQHPFYIALADAMKKEAQAENVPLEVSI 62 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 + D QL ED K I +P+ S + + +A K GI ++ +D + Sbjct: 63 --ANQDLSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPAN--- 117 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 +V +FV TDN A G K A + +G +G VA+I+ S R G + Sbjct: 118 ----NVDVTSFVGTDNFAGGEKAAELMAKTIGEKG-NVAVIDY-PTVQSVVDRIEGFKKG 171 Query: 182 FKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 K IK+VA QP R +AL A N+LQ NP+I I+ D A+ A AV +A Sbjct: 172 IAKYPDIKIVAIQPG-ITRPEALSAAQNILQANPDIVGIFGFGDDAALAAASAVKSAKLE 230 Query: 242 GKVLVVGTDGIPEARKMVE-AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 +V V+G DG+ EAR V+ M +AQ P +G ++ K +V Sbjct: 231 NQVKVIGFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAVETAAKVIKGEEVPAKQPIVP 290 Query: 301 FKLV 304 + Sbjct: 291 GVVT 294 >UniRef50_A4BF94 D-ribose-binding periplasmic protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF94_9GAMM Length = 319 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 3/290 (1%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 + + +V+K+L NPF++ M++G A LGV + + + +E + Q+ L ++ Sbjct: 30 ATPVDKPKVLLVMKSLVNPFYIQMEQGARQAANELGVELIVRSGTNETLVEQQISLIDEQ 89 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + AP S+ ++ + RA + G+ +VN+D +ID + +++AG FV+ DN Sbjct: 90 LAAGIDALVIAPADSIAILPVLIRANELGVKIVNIDNRIDTNAIQRAGLPAIPFVSVDNE 149 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G + + + G + + IIEG + RR+GA A ++ I++VAS+ A W Sbjct: 150 FGGYEAGKILAELAGPD-AKALIIEGPRSAINARERRDGARRALQEN-NIEVVASEVASW 207 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 A + NV RNP + I+ AND MA+G G L+ G D IP+AR Sbjct: 208 KLESAYALTQNVHARNPELNVIFAANDMMALGALLYAQEHGLNDW-LIAGFDNIPDARAA 266 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 V G++ T+ Q G G+ VD V + + Sbjct: 267 VREGRLAVTIDQQADRQGYQGVATAVDLLNDKAVDDVVLVKTRVITADDN 316 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 12/289 (4%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + + + + ++DEA+ G + + + ++ + Q+ EDL +N Sbjct: 87 SDYLIGYSQLANTGTYRIAETNSMKDEAEKRGFKLIV--TDAQDNTAKQVSDVEDLIAQN 144 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 + +P L + A + + ++ +D + AG + ++ TD V G Sbjct: 145 IDLLILSPREFEGLETALQTAKENSVPVILVDRLAKGE----AGVDYVTYIATDFVWEGQ 200 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 ++ DK G + + G G++S + R G + +K++ASQ +++R + Sbjct: 201 AAGEWLKDKTGGT-CNIIELTGTVGSSSAQDRATGFAGVVDQNEGMKIIASQTGNFERSE 259 Query: 203 ALDVATNVLQRN-PNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMV 259 V N+LQ + + A++C ND MA+G QA+ AG +LV+G DG ++ K V Sbjct: 260 GQKVMENLLQAHGGEVDAVFCHNDQMALGAVQAIKAAGYKPNEDILVIGIDGEMDSFKSV 319 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 AG+M+ATV +P G + +V +VD+ Sbjct: 320 IAGEMSATVVSSP-MYGPITFDTVEKILAGQEVPEQTIMEG-VVVDAGN 366 >UniRef50_B0NFD0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFD0_EUBSP Length = 367 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 164/288 (56%), Gaps = 2/288 (0%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + A + TL+N FWV M++G ED A+ GVS+D+ A+ S+ D QL + ++ K+Y Sbjct: 77 GKKLAAIESTLTNSFWVTMQEGYEDTAEEYGVSIDVQATDSDTDTTGQLDILNNMLVKDY 136 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 + IA +PL+ L+ + A + + ++ +++ D+LK+AGG ++A +T D G Sbjct: 137 EAIAVSPLTEDCLISGIVAANQNDVKIITTGNEVNEDSLKEAGGKIDAKITVDFYNQGVL 196 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 GA +IIDK +G +VA+I G G +ARR+GA E F+ A +++VA + D+D KA Sbjct: 197 GAQYIIDKTDGKG-KVAVIAGNEGATQSDARRDGAKETFEDA-GMEVVAVEQCDFDAQKA 254 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 D A +++ NP+I I C ND MA+GV +A+ +V VVG D EA+ +E G Sbjct: 255 YDAAAAIIESNPDIVGIACGNDDMALGVVRALEEKDVKDQVAVVGVDFTEEAKAAIEEGT 314 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ATVA +P +G + +M+ A + V + + +VDS V Q Sbjct: 315 YDATVAMSPYLMGKEAVIIMLKALEGQDVSKVGDSTPMAVVDSTNVDQ 362 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 11/304 (3%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 L S L S + ++ KT SNP++V +++ + +A G + A Sbjct: 16 LMAGSLVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAF 75 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 +GD + Q+ E++ + KGI P SS ++ + +A G+ ++ LD D ++ Sbjct: 76 DGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDA-- 133 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF-- 182 V+A TDN A G ++ LG +V +++G G R +G E F Sbjct: 134 ----VDATFATDNKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGL 189 Query: 183 -KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT 241 + ++V + + D+ KA N+LQR P + A+Y N+ A G QA+ G+ Sbjct: 190 TDNSP--EIVGQENTNGDQTKAQTAMENLLQRAPGVNALYTINEPAAAGAYQAIQAVGRA 247 Query: 242 GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEF 301 +V + DG V+AG++ ATV Q PA + G++ +V + G Sbjct: 248 DQVTIGSIDGSCTGVADVKAGKIGATVMQFPAKMAELGVQAVVKFAEDGTKPSGFNDTGS 307 Query: 302 KLVD 305 +L+ Sbjct: 308 ELIT 311 >UniRef50_B5YAA5 ABC transporter sugar-binding protein n=2 Tax=Dictyoglomus RepID=B5YAA5_DICT6 Length = 331 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 125/320 (39%), Gaps = 18/320 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAV--VLKTLSNPFWVDMKKGIEDEAKTLG---- 54 M K+L F ++ L+++T+A + + K L+NP + + G A+ L Sbjct: 1 MKKFLMIFFIVVIFLLMATTAQTPKKLVFAWIPKALNNPVFELGRDGAFKRAEELSKKGP 60 Query: 55 VSVDI-FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 V++ + + D Q ++ ED+ + GIA + L+ + +A + GI ++ Sbjct: 61 YKVEVLYVASVASDATEQARVVEDVVARKVDGIAISCNDPTALIDVINKAVEAGIPVMTF 120 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEA 173 D ++ +N G A ++ +G G+VA++ G G + E Sbjct: 121 DAD-------SPKSKRFTYLGVNNYEGGKWAAKLLVRAMG-TSGDVALLTGVPGALNLEE 172 Query: 174 RRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM---G 230 R G + KK +IK+V + D + + V +Q+ P ++ + + G Sbjct: 173 RMRGFKDEIKKYPKIKIVTTVACYDDINRGVQVVEETMQKYPKLRGWFFVGLWPLLAERG 232 Query: 231 VAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG 290 A K KV V D +P ++++ G + V Q G + ++ + Sbjct: 233 SMPLWEKAAKAKKVFTVAFDTLPVELQLLKEGYLCGLVGQKYWGWGYDAIDILYRKVVNN 292 Query: 291 KVIPLDKAPEFKLVDSILVT 310 + P +V V Sbjct: 293 EKFPDWIDSGMDIVTQKNVD 312 >UniRef50_A8S3L7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3L7_9CLOT Length = 378 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 79/289 (27%), Positives = 139/289 (48%), Gaps = 3/289 (1%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 + + V++ + SN FW MK E+ A+ LG+ + +F + +E D Q QL + Sbjct: 86 SGQGEKIGVLISSTSNEFWGTMKTRYEEAAEDLGIEIRVFEADAEDDTQGQLDALNTMVT 145 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + I +P+ NL+ + A + I ++NL +D + L AGG+++ +T + Sbjct: 146 MGFDAIILSPIDGTNLIPGIVAANEAEIPVINLGPGVDAEALADAGGHLDGKITVNFEEQ 205 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G+ A+ +I ++ +GG+VAI+ G G R NGA F+ ++LVA+Q DWD Sbjct: 206 GSTVANDMISRM-EDGGKVAILAGLEGAGQSVGRTNGAKTVFENTEGVELVAAQACDWDT 264 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 KA + ++L +P++K I+ ND MA+ QA+ G V+V G D +A+ +E Sbjct: 265 EKAYEATKDILTAHPDLKGIFACNDNMALAAVQALQEMG-NKDVMVYGVDYTTDAKAAIE 323 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G M ++ + A ++ + + P LV V Sbjct: 324 DGTMMGSMTYSSAIYTKAAEEMAMLIVQGKTFKDPVYLP-LTLVTQDNV 371 >UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGX0_9BACT Length = 497 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 115/311 (36%), Gaps = 16/311 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAV-VLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 M + ++L A + V + + + + +VD+ Sbjct: 1 MKRINIILIVLSFSMLLLLGACTQKNVVIGVSQCCGGVWREKVNNEMRQAQYQYK-NVDL 59 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + +E D Q Q + + + + I AP + ++ + RA++ I ++ D K+ Sbjct: 60 LFTTAENDGQCQARQIDSMIARKVDLIVVAPDNVNDVTPAIERAYRAHIPVILFDRKVKT 119 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + A + DNV G + A F+ KL +G V I G + R G Sbjct: 120 PH-------YTASIGGDNVEAGREVARFLASKLDGKG-TVVEITGLKDASPVIERHRGFH 171 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 E K IK+V + ++W +A ++ L + + ++ +D A+G G Sbjct: 172 EVMKNYPGIKVV-TLESNWKLERAQELMKQYLDKGGHADGVFGHSDLGAIGAFLEAERRG 230 Query: 240 KTGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 ++L+VG DG+P E V+ GQ A+ G ++L ++ + + Sbjct: 231 IDKQMLIVGIDGLPGEWEGVDRVKRGQFAASYVYPT--QGEKIMELAMNILQGKPYKKDN 288 Query: 297 KAPEFKLVDSI 307 F Sbjct: 289 VMKSFLATPEN 299 >UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic sugar-binding n=4 Tax=Vibrionaceae RepID=Q1Z3C1_PHOPR Length = 355 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 123/319 (38%), Gaps = 23/319 (7%) Query: 1 MNKYLK----YFSGTLVGLMLSTSAFAAA----EYAVVLKTLSNPFWVDMKKGIEDEAKT 52 MNK K T + +++ A V + + F V+MK + A Sbjct: 41 MNKPKKAVQGVLFITGLMALVACGGEKADSNVTRIGVAIPNFDDTFLVNMKDSMSAYAAK 100 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 ++++ ++ D QL ++ + GI P+++ K GI LV Sbjct: 101 Q-DNLELIFVDAKEDTVKQLGQIQNFIIQQVDGIILVPVNTDATQPMTDDILKAGIELVY 159 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 L+ + + A+V ++ + G + A + ++GG + II G + Sbjct: 160 LNRRP------TYLPDGVAYVGSEELRFGEEQAKYAASH--SDGGNIGIIMGMMTVEAAI 211 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R G + FK+ + ++ Q A W R + + V N + + I ND MA+G Sbjct: 212 LRTQGVEDFFKEKPEYNIIRKQTALWQRSQGMVVMENWINSGDKLDIIISNNDDMALGAI 271 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 QA+ AGK +V+G D P+ ++ G + ATV Q+ + + Sbjct: 272 QALRAAGKLDDTIVIGVDATPDGLMAIKNGALDATVFQDGRSQARGAIDAALSGIN---- 327 Query: 293 IPLDKAPEFKLVDSILVTQ 311 + + + LVT+ Sbjct: 328 --KTPRDKITWIPAELVTK 344 >UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW4_9BACT Length = 935 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 110/307 (35%), Gaps = 13/307 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M + L + ++L+ A ++ + + S W D + L S+ + Sbjct: 1 MKRKLHLIIYVAIIVLLTGCAQKPRKFVIGVSQCSEDIWRDKLNDELKMGEYLNDSLIVK 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + S D Q + ++ + +P + V RA+ KGI ++ D K + D Sbjct: 61 LASSNDDNVLQNKQVNQFIDEGVDLLIVSPNQLSAISKSVERAYDKGIPVILYDRKTNSD 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 AF+ DN +G +FI +L +G + I G G++ R G + Sbjct: 121 -------KYTAFIGCDNYTIGKSMGTFIAQQLQGKG-RIVEISGLEGSSPALERHRGFMD 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A K +++VAS+ +W + +L++ + ++ ND +A G A Sbjct: 173 AIKPYPGLQVVASEEGNWKEEGGIQAMKRILKQTQDFDYVFAHNDCLAWGAYVAARQMRV 232 Query: 241 TGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G DG+ ++V G A+ G + L + K + Sbjct: 233 KRNYKYTGVDGMATEGGGLELVRDGIFEASYLYPTK--GDEVIALAMKILKHQPYERDNY 290 Query: 298 APEFKLV 304 + Sbjct: 291 LSTSIIT 297 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 18/304 (5%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 + + AV+L + S F V + +G++D+AK LGV V + ++GD +Q+ Sbjct: 26 SAAQEANDGTKTKKIAVLLYSQSFEFMVALGQGVKDKAKELGVEVTVL--DAKGDSSTQI 83 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 +D + GI +P +S LV V G + +D I G +A Sbjct: 84 SQIQDQLAQGVDGIVLSPNNSAELVPGVQMIHDAGKTVTTVDSVI-------PGDIADAA 136 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 V DN G GA + +G +G V +G G R G + K+ IK++ Sbjct: 137 VAFDNEKAGKLGAEALAKLMGEKG-TVLEYQGAKGAYHAILRGKGFNDGIKQFPGIKVIG 195 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK------TGKVLV 246 A W AL + + + +I ++ ND M G+ ++ K + + Sbjct: 196 R-DAQWTADNALSLTVDNFTADSSINGLFSHNDEMVRGIVSGLSQINKDAPVGAANHIPL 254 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 VG DG P A + G AT+ QNP ++GA L+ VD +V P + + KL+ Sbjct: 255 VGVDGTPLALDRIRNGVQDATMDQNPFEMGALALQAQVDLLDGKQV-PKMQLTDTKLITK 313 Query: 307 ILVT 310 V Sbjct: 314 ENVD 317 >UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0LXA2_GRAFK Length = 907 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 124/315 (39%), Gaps = 19/315 (6%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAA----EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVD 58 KYLK + ++ + + + ++ + +M K ++ EA + + Sbjct: 2 KYLKLLLFVFLSILTDSCQVKSEEEKFKVGFSQAMTTDNWRREMNKSMKLEAS-MHPDII 60 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 + +E +Q+ E+ + +P+ S+ + + +A GI + +D KI+ Sbjct: 61 LEIKDAENHITNQVAHIEEFIKDGVDVLIVSPIQSIPITPAIEKAMAAGIPTIIIDRKIE 120 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 G N A+V +N+ +G A +I+ + ++ I G+ G++ R G Sbjct: 121 -------GQNFTAYVGANNIEIGRNAAKYILSHSSGK-ADIIEITGQEGSSPAYERSMGF 172 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + ++K+ DW++ +++L I+ ND MA+G + + Sbjct: 173 KKTLDSVPELKVRHVIKGDWEKTSIQSKLSDLLDSVKAPDYIFAHNDRMALGAWEVARSK 232 Query: 239 GKTGKVLVVGTD---GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 ++ ++G D G ++V+ + AT+ + +KL D V Sbjct: 233 SLEEEINIIGVDGVFGPNGGIQLVKDNILNATILYPTGGM--ETIKLAEDILNGENVNKN 290 Query: 296 DKAPEFKLVDSILVT 310 + ++DS+ V Sbjct: 291 NIL-RTVIIDSVNVD 304 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 17/314 (5%) Query: 1 MNKYLK--YFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVD 58 M L + L+ + A + A++ + NPF+ +G + +A LG + Sbjct: 1 MKNTLLKSCLTAALISMAGVAGAASNGLIAIITPSHDNPFFKAEAEGAKAKATELGYTTL 60 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 + + + D Q QL E + K I S + P+ +A GI +D +I+ Sbjct: 61 V--ASHDDDVNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREIN 118 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 G + + ++N GA + +G +G + + G+ + + R G Sbjct: 119 ET------GIAVSQIVSNNYQGAQLGAEKFVTLMGGKG-KYIELLGRESDTNAHVRSQGY 171 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + + S +K+VA Q A+W + +A + ++LQ NP+I + NDTMA+G A+ A Sbjct: 172 HDVIDEHSDMKMVAQQTANWSQTEAFNRMESILQANPDITGVISGNDTMALGAEAALKAA 231 Query: 239 GKTGKVLVVGTDGIPEARKM-VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G+ V+VVG DG R + G + ATV Q + K+GK Sbjct: 232 GR-NDVVVVGFDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTGKTG---- 286 Query: 298 APEFKLVDSILVTQ 311 E +L+D +L+ + Sbjct: 287 LEEKQLMDCVLIDE 300 >UniRef50_A8RQT3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQT3_9CLOT Length = 354 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 101/335 (30%), Positives = 153/335 (45%), Gaps = 36/335 (10%) Query: 1 MNKYLKYFSGTLVGLMLSTS--------------------AFAAAEYAVVL----KTLSN 36 M K + T + ++ + A + + + KTL+N Sbjct: 1 MKKRVVSILLTGLAVLSLAACTSNGLEAASATNDNAKEAEAGTEKKEGISVYWVGKTLNN 60 Query: 37 PFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL 96 P+W+ + + A LGV + I E D + Q+ + E K I + SS + Sbjct: 61 PWWISVSDFAQQTADNLGVDLTIAIPQEEVDLEKQVSMIEAAIEKKADAIVVSAASSDGV 120 Query: 97 VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG 156 + + +A + GI +VN D +I ++ ++AFV D+VA K +I ++LG EG Sbjct: 121 IPAIKKAREAGIKIVNFDTRISDTSV------IDAFVGGDDVAGAYKAGKYICEQLGGEG 174 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 EVAII G ++G R G +A + IK+VA Q A+W KA DV TN+L NPN Sbjct: 175 -EVAIITGLMEQSTGVDRHAGFMQACAEYPGIKVVAEQGAEWSSDKAADVTTNILTANPN 233 Query: 217 IKAIYCANDTMAMGVAQ-AVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADI 275 +KAI+ ND MA+G+ A A K +++VG DGI +A M G + A V+ D Sbjct: 234 VKAIFACNDQMAVGMVNAAKAAGKKADDLILVGYDGILDAVNMTMDGDLDAFVSLPNLDE 293 Query: 276 GATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 GA G+KL + L D LVT Sbjct: 294 GAMGVKLATALVMN----SDYHYDREILYDCTLVT 324 >UniRef50_B9L479 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L479_THERP Length = 357 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 16/289 (5%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A+V K L +PF+ D +KG E +AK LGV+ + + +P + D Q+++ EDL K Sbjct: 75 KITIAMVPK-LVHPFFEDCRKGGEQKAKELGVTFE-YVAPQQADPALQVKIIEDLIRKKV 132 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I+ +P ++ +A K+GI ++ D ++ TDN A G Sbjct: 133 HAISISPNEPKSVEPVIAEGMKQGILMMTFDAD-------SPNSQRVMYIGTDNKAAGKT 185 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 + L G +V II G G + R G E I++V Q D D K Sbjct: 186 MGETMAKLLNGRG-KVGIITGGLGALNLNQRIEGFKEGV--GPNIQVVDVQATDDDLQKG 242 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN---AGKTGKVLVVGTDGIPEARKMVE 260 L V+ +L+ +P++ I C + T +AQ + + + GK+++V D + E ++ ++ Sbjct: 243 LSVSEAMLRAHPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAIQ 302 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP-LDKAPEFKLVDSIL 308 G + AT+ Q P +G ++ D P + +V Sbjct: 303 EGIIAATMVQRPVQMGVLTVQWAYDILTGKAKPPFKNIDTGVTVVTKEN 351 >UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KYA7_9FIRM Length = 281 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 10/285 (3%) Query: 28 AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVD-IFASPSEGDFQSQLQLFEDLSNKNYKGI 86 A+ + ++N F + ++ EA+ LG + D + D +Q+ E GI Sbjct: 2 ALFMSHMTNEFVKTLSSSVQKEAEELGYTGDSFKIYDGKNDVATQVSQIEQAVTLGVDGI 61 Query: 87 AFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGAS 146 P+S+ +V V A K G+ +V L+++I N + FV DN + GA Sbjct: 62 IIEPVSTDGIVKAVKDAEKVGVKVVILNQRISDQNA------ADTFVGADNESTGAALMK 115 Query: 147 FIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV 206 +++ L +G + + G G+ R G + +K++AS ADWD KAL + Sbjct: 116 KVMEDLDGKG-NIVELLGPMGSDGQVGRSKGFDSVLAEYPDVKVIASDSADWDTAKALTL 174 Query: 207 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTA 266 N L +I+A+ ND MA+G AQA+ AG T K+ V G D + + G MT Sbjct: 175 TENWLTS-SDIQAVVAQNDGMAVGAAQAIKEAGLTDKIKVYGVDATSDGLNAIVNGGMTG 233 Query: 267 TVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 TV+Q + G L + V P + + V + Sbjct: 234 TVSQGTENQGKISADLCSNLIYGQSV-PKEVIATNVVYTKENVNE 277 >UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6Q9_9SPHI Length = 918 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 111/316 (35%), Gaps = 19/316 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE----YAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 MN +Y + L+ + + S+ + M ++ E L Sbjct: 1 MNLPSRYLLLFITALLSFSCNQKQEKHAYLIGFSQCVGSDLWRKTMLDEMKMELS-LHPG 59 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + + ++ + +Q++ +++ ++ + +P + L V + + GI ++ +D K Sbjct: 60 AKLVYADADNNSNTQIKQVKEMLDQGIDLLIISPNEAKPLTEIVEQTYSDGIPVIVIDRK 119 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 +V DN +G + ++ + + + + G G++ R Sbjct: 120 T-------TSNLYTCYVGADNYQIGYMASQYLGNTISG-PANILEVMGLPGSSPTIERNK 171 Query: 177 GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVA 236 G + KK +K+ + DW + A + + + +I ++ ND MA Sbjct: 172 GFNDGLKKFPNLKIKSQVYGDWMKPNAERQLSKISDQLNDIDVVFAHNDNMAFAAQSVFK 231 Query: 237 NAGKTGKVLVVGTDGIPEA---RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 G + +G D P A +M+ G + A++ G + + Sbjct: 232 KLGIASQAKFIGIDATPGAGGGLQMISNGLIDASMLYPTG--GKEAITTAIKIMDKIPFS 289 Query: 294 PLDKAPEFKLVDSILV 309 P ++DS V Sbjct: 290 KELILP-SLVIDSSNV 304 >UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z758_9NEIS Length = 313 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 123/312 (39%), Gaps = 16/312 (5%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE-YAVVLKTLSNPFWVDMKKGIEDEAKTLG-VSVDIF 60 +Y + L GL + A + V + L+NPF+V + KG ED AK +G V + Sbjct: 4 RYTVLTAAVLAGLAAPSFAARPLKSVGVAVGDLANPFFVAIGKGAEDAAKKIGGPGVKVT 63 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+ D +Q+ E+ I + + + +A GI + Sbjct: 64 TVSSKYDLNTQVGQIENFIANKVDVILVNASDPMGIEPVLKKARAAGI---------AVV 114 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + +A V +DN GA+ F+ +LG G V I+ G + AR G + Sbjct: 115 AVDVGAVGADATVMSDNAMAGAESCKFMAQQLGGRG-NVVIVNGPP-VTAVSARVAGCKK 172 Query: 181 AFKKASQIKLV-ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239 IKL+ +Q A R ++ N+L + I A++ ND +G AV AG Sbjct: 173 VLGNYPGIKLLSDNQDAHGSRDGGMETMANLLTAHKKIDAVFAINDPTGIGAELAVKQAG 232 Query: 240 KTGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 ++ L+ DG P+A K ++ + + AQNP + +++ D + Sbjct: 233 RSDVKLIAAVDGAPDAEKALKDKKSLFAVSAAQNPYTMATMAVQIGYDILNGKRPAKSQV 292 Query: 298 APEFKLVDSILV 309 V V Sbjct: 293 LLPTPAVTKANV 304 >UniRef50_A5FZM3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZM3_ACICJ Length = 339 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 10/296 (3%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 L + + ++ K+ ++P+W+ +++G + AK GVSV A S D Q+ Sbjct: 33 SLPVPAKPAKHYHFTLITKSNASPYWLAVREGADAAAKKFGVSVAFEAPASGTDLAGQIG 92 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + + GI A + L+ PV A I +V +D + + + F+ Sbjct: 93 MVNNAVTGGTDGIILAAQNPQALLKPVKSALAHHIPVVTVDSGLSPNIS-------DCFL 145 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA- 192 T NV A A + D L G+ AI++ ++G AR G K IK + Sbjct: 146 ATSNVGAAAALAKYTADHLMGGKGQYAIVDFNHTASTGIARPKGFMLGMKSYPHIKKMGP 205 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 Q ++ D L +AT +L + P++K I+ AND A+G A+AV A KV VVG D Sbjct: 206 IQYSNNDVSAGLRIATTMLTQYPHLKVIFGANDRAALGPAEAVQRAHA--KVKVVGFDAD 263 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 +V+AG + A++ Q+P D+G + ++D + P F L L Sbjct: 264 LGEIALVKAGIIQASILQSPYDMGYYAVVALLDKLDGKTLPKRINTPYFLLTPKNL 319 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 113/292 (38%), Gaps = 15/292 (5%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 + + T P+ K I EA V++ + E + Q+ E+ Sbjct: 28 AVAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKH-PDVELIITDGEDRTEKQVADVEN 86 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 L + + +P S L V +A I + LD ++ D FV DN Sbjct: 87 LIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETD-------QYTQFVGGDN 139 Query: 138 VAVGAKGASFIIDKLGAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIK-LVAS 193 +G + ++ LG +G G + I G G R +G E K IK L+ Sbjct: 140 KLIGRAAGEYAVELLGGKGKAQGNIVEIWGGMGTQPAHDRHDGFHEFTDKEPGIKNLLDK 199 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 Q DW + +A ++ L+ N I +Y ND MA G A +AG+ ++ +G D +P Sbjct: 200 QSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLAAKDAGREKEIKFIGIDALP 259 Query: 254 -EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV 304 E V G++TAT GA GL+ V K KV K+ Sbjct: 260 NEGVTWVSNGELTATFLYATP--GAEGLRQAVKFLKGEKVEKTVTLDTLKVT 309 >UniRef50_A0QS72 Ribose ABC transporter, periplasmic binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QS72_MYCS2 Length = 348 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 9/299 (3%) Query: 12 LVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQ 71 + + A A + + + F++ M+ G ++EA LGV+V+ P + D Q Sbjct: 47 VTTVTAPPKASKNYNIAFLQGVVGDQFYITMQCGAQEEAANLGVTVNTQ-GPQKFDPTLQ 105 Query: 72 LQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA 131 + + + + AP + MP+ +A GI +V +D + + Sbjct: 106 KPILDSIVASKPDALLVAPTDVQAMQMPLEQAAAAGIKVVLVDTTTNDP------SYAVS 159 Query: 132 FVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLV 191 + +DN G I +L EGG+V ++ G ++ +AR G EA + V Sbjct: 160 AIASDNEGGGRAAFEAI-KQLHPEGGKVMVMGLDPGISTTDARTKGFEEAVAEDPGFTYV 218 Query: 192 ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDG 251 Q + D A + LQR+P++ ++ AN A G A + AGK+ +V VVG D Sbjct: 219 GVQYSHNDPATAAQLIGAQLQRDPDLVGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDA 278 Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 P + + G + A VAQ+P IG G+ V A + G+ P + F ++ + Sbjct: 279 GPNQIQALREGTVQALVAQDPGTIGKFGVDEAVTALEGGENSP-NVQTGFTIITRENLD 336 >UniRef50_C6J484 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J484_9BACL Length = 329 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 131/323 (40%), Gaps = 24/323 (7%) Query: 1 MNKY--------LKYFSGTLVGLMLSTSAFAA-------AEYAVVLKTLSNPFWVDMKKG 45 M + + +G L+ L+ S + + +++K +W K G Sbjct: 1 MKRLPKCIYRAGILLMAGALITLLSSCGGPGSGADHQQIYDVDMIVKMDRGDYWKTTKLG 60 Query: 46 IEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 105 E AK V ++ A +E D + Q++L E+ + I A L R Sbjct: 61 AEVAAKEFNVRLNFVAPENENDVEGQIRLMEEAIERRPDAIILAASDYEALGQVTDRTSY 120 Query: 106 KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGK 165 I ++++D ++ A V+ FV T+N G K A ++D G E+ II Sbjct: 121 YDIPVISMDSEV-------ASTKVKTFVGTNNYEAGQKAAERLVDLTGP-VSEIGIINFV 172 Query: 166 AGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAND 225 G + R G + + + +V Q D A + ++L+R PN+ I + Sbjct: 173 KGARNANQREEGFLDYVARFPDVHVVDIQYCGSDEYLAYKLTADMLKRFPNLNGIVSLSA 232 Query: 226 TMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVD 285 ++G +AV G GKV ++ D PE ++++ ++ A V QNP + G + V Sbjct: 233 ESSIGAGRAVDELGYGGKVKMIAFDNPPEMLELLQEEKVQAMVVQNPFNNGYMAVAAAVQ 292 Query: 286 AEKSGKVIPLDKAPEFKLVDSIL 308 A + K+ + KL+D Sbjct: 293 AARGEKLEDR-IPTDTKLIDLNN 314 >UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDF0_9FIRM Length = 333 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 19/291 (6%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 NP+ V + + ++ A GV+ + + D + + ED+ K+ Sbjct: 51 TVGFAQSGNPNPWMVALTESMQQSADEYGVNY--IYTDANDDMATHVANIEDMLAKDLDI 108 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + AP+ L + A +KG+ ++ + + G V +D G + A Sbjct: 109 LVIAPMEDTGLEAVLDEAAEKGVPVIL--------SARTTQGEYVTTVYSDQAWEGERCA 160 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWDRIKAL 204 I +K+ +V + G G +S R G + + +++V Q A++ R +A+ Sbjct: 161 ELIGEKIPD--AKVVELRGIEGTSSVAGREKGFRDVMAEQYPDMEIVVEQTANFSRQEAM 218 Query: 205 DVATNVLQR-NPN-IKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVE 260 D N+LQ P+ I A+YC ND MA+G QA+ +AG T + VVG DG EA ++V+ Sbjct: 219 DAMANILQAKGPDAIDAVYCHNDEMALGAVQAIKDAGLTPGEDIQVVGIDGQKEAWELVK 278 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +G+M TV +P G T +++ V P+ +++ V + Sbjct: 279 SGEMLGTVQCSPKH-GPTVFEVIQKILDGETVQKETIVPD-QVITKENVDE 327 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 20/295 (6%) Query: 4 YLKYFSGTLVGLMLSTSAFAA------AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 ++ L L+L A V L T + F+ ++++G+++EA + Sbjct: 8 RRFWWLAALCALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQ--KL 65 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 + E D Q E+ + + I P S + +ARA + I + D + Sbjct: 66 TVRLDAGEFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTADIRA 125 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 G V + + +DNVA G + +L G +VAII+ + S R G Sbjct: 126 KE-------GAVVSHIASDNVAGGRLAGEYAAKRLNGRG-QVAIID-QPYIQSVIERVRG 176 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 EA K I++VA D R ++L A ++LQ + A++ ND A GV A+ Sbjct: 177 FEEALKPYPNIRVVARLTGDGVRDRSLKAAEDLLQSQRKLDAVFAVNDESAFGVVSAIEA 236 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSG 290 AG+ G + V+G D EARK++ G+ + A +AQ+P IG ++ + Sbjct: 237 AGRKG-IFVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIRAVATHLAGQ 290 >UniRef50_C0CSL0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSL0_9FIRM Length = 389 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 19/300 (6%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL---GVSVDIFASP--SEGDFQSQLQ 73 T + +A +K N W ++ G E A+ G + + + E D + QL Sbjct: 86 TKSSDEYSFAGNVKAFENVVWQEIANGYEGFAEDATAAGCKLSVDTTSPMGESDEEGQLS 145 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + +D K + +P+S N + + A + I + ++ + + + FV Sbjct: 146 ILKDQVRKGVNAVLLSPISDANCLPGIEAAHEADIPVYAVNNEFN---------GADMFV 196 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVA 192 +++ G A ++ +KLG G VAI+ G A A R G E F S I++VA Sbjct: 197 GPNSLEQGQLAAEWVNEKLGGSGD-VAIVMGMAKTAVTRNRTQGFEEWFADNDSDIQVVA 255 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTD 250 Q ADWDR +A DVA L+ P++KAI+C ND MA+GV +AV A T + V+G D Sbjct: 256 KQNADWDRSQAKDVAATFLKTYPDLKAIFCNNDVMALGVIEAVKEADLTLNKDIYVIGCD 315 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 G EA + A +M AT+ P G ++ + V P K++DS V Sbjct: 316 GQSEAYDSIRANEMAATIDTFPYYEGYMAAEVCYRSLIGQTV-PRVVFTPSKMLDSTNVD 374 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 10/288 (3%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 A + V KTL+N +W + +G + A LG+ A+ SEGD QL + E+L ++ Sbjct: 54 AAGTKVGGVSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQ 113 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + + F+P + NL+ V A G+ ++N+++ + +V G Sbjct: 114 GFNALLFSPQTDANLIPAVEAATAAGVPVLNVNDAVIPSAAN--------YVGNVQKGNG 165 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRI 201 A++ I +GG+VA+IEG+ G + R G TE + ++VAS PA+W R Sbjct: 166 VNVANWFI-ANRPDGGKVAVIEGQPGVYAAGQRTAGFTETITAGGKFEVVASVPANWSRE 224 Query: 202 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEA 261 +A + A+ +LQ+ P++ Y ND MA+GV +AV AGK +V V GTDGI +A V A Sbjct: 225 EAFNAASTILQQYPDLIGFYANNDGMALGVVEAVKAAGKAEQVAVFGTDGISDAYAAVRA 284 Query: 262 GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G +T TV P G +++ + + P A L+ V Sbjct: 285 GDLTGTVDSFPVLTGEIAMEVALRLMAGQDL-PRVVATPQALITKDNV 331 >UniRef50_C8WV69 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Firmicutes RepID=C8WV69_ALIAD Length = 349 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 23/298 (7%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 Y +V +W G++ AK LGV +P + D ++ + + K+ Sbjct: 56 ETYYMVTFLSGIEYWKGCFAGMQAAAKDLGVKAVFTGAP-QYDINQEVTTMQQVIAKHPA 114 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI +++ + + +A GI +++ D A++ T N+ G K Sbjct: 115 GILVTSINAQAMTPVINQAIAAGIPVISFDSDA-------PQSKRYAYLGTSNIEAGQKA 167 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKA 203 A ++ LG G EVA+I G + + R G + K +K+VA Q + D+IK Sbjct: 168 ADYLGQALGGHG-EVAVIT-TPGELNLDQRVQGFKDEMAAKYPGVKVVAVQNGNSDQIKT 225 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 V + +LQ PN+ I+C G A AV AGKTG V +V D +++GQ Sbjct: 226 AQVTSALLQTYPNLAGIFCTEADEGTGAATAVQEAGKTGTVKIVSFDTDKATLNAIKSGQ 285 Query: 264 MTATVAQNPADIGATGLKLMVDA------------EKSGKVIPLDKAPEFKLVDSILV 309 +TATVAQ ++G GL + + +P + +V V Sbjct: 286 ITATVAQGTWNMGFWGLMDLFAIHHNLVHPVANWQQSGVDPVPPEVDTGVTIVTKSNV 343 >UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Selenomonas RepID=C9LWW5_9FIRM Length = 347 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 13/287 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + + F + +K ++AK+ G+ V+ ++GD Q+ + + Sbjct: 70 KVIYANHNDDDAFAMQLKNTFAEKAKSAGLDVEFL--DAKGDSNLQIDQLNEAISNKAAA 127 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 I + ++V V +A + GI +V ++ ++ + + +D+ G Sbjct: 128 IVLLAMDGTSIVPTVEKAREAGIPVVIMNRDVNDPKVIGSL--------SDDREAGRMQG 179 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA-FKKASQIKLVASQPADWDRIKAL 204 F+ L +V + G++ + R G EA K +KL+AS W + + + Sbjct: 180 EFMASHLPPN-AKVVYLMGESSLSVAVKRWEGFKEACLDKRPDVKLLASVDGSWSKAEGM 238 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 T L P I + AND MA+G QA+ A + LV G D P VEAG++ Sbjct: 239 KAMTLWLSFFPEINGVVAANDEMALGAIQALKAANRLNGCLVTGVDATPAGLAAVEAGEL 298 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + TV Q+ A + +V SGK F + V Q Sbjct: 299 SQTVKQDAEGQAAGAV-TLVQGFLSGKAPTESLDIPFTSITRENVAQ 344 >UniRef50_C5CZB4 Periplasmic binding protein/LacI transcriptional regulator n=24 Tax=Bacteria RepID=C5CZB4_VARPS Length = 315 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 10/292 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 A +V K + FW +K G E AK L V V +E Q+ + Sbjct: 22 AQAQQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKVKVTFEGPETEAMVDKQIDMLAAA 81 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 K + I FA L S + + +A I +V D +D D TTDN Sbjct: 82 LAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGVDSDIP-------VTTTTTDNK 134 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPAD 197 A A A + + +G + GEVA++ + +G RR+G K IK+V+ Q Sbjct: 135 AAAALAADKMAEMIG-KSGEVALVVHDQTSRTGVDRRDGFVNRIKSAYPNIKIVSVQYGG 193 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 D++K+ ++ ++LQ +PN+K I+ AN+ A+GV V ++GKV+++G D + + Sbjct: 194 GDQLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKVVIIGYDSGKQQKN 253 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 + G M + QNP +G +++ V A K K+ P F D + Sbjct: 254 AIMDGSMAGAITQNPVGMGYKTVEMAVKAIKGEKL-PKVVDTGFFWYDKTNI 304 >UniRef50_A4IT20 ABC transporter sugar-binding protein n=9 Tax=Bacillaceae RepID=A4IT20_GEOTN Length = 337 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 124/289 (42%), Gaps = 10/289 (3%) Query: 19 TSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDL 78 A + +V + L N +W ++KG + A+ L V ++ + P + + L++ + Sbjct: 44 AKAKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDVDLE-YIGPRQANIDEHLRILKKA 102 Query: 79 SNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV 138 + GI L+ V + K I ++ +D ++ TDN Sbjct: 103 AAAKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPT-------SWRVGYIGTDNY 155 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G +++ VAII G + R G +A K +I++VA + + Sbjct: 156 YAGFIAGRALVEDTQG-MVNVAIITGSLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHI 214 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 R++A + +L+++P + A Y + A+G+A+ V + + ++G D +PE + Sbjct: 215 TRVQAAEKTYTILKKHPEVNAFYGTSALDAIGIARVVEQFHREQETYIIGFDTLPETIEY 274 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 ++ G + ATV Q P ++G +K+M D V P E K++ Sbjct: 275 LQKGTIEATVVQEPYEMGYRAVKMMADIVAGHDV-PAITNTETKVIRKE 322 >UniRef50_C8STD2 Monosaccharide-transporting ATPase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STD2_9RHIZ Length = 329 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 166/305 (54%), Gaps = 8/305 (2%) Query: 6 KYFSGTLVGLMLSTSAFAAA--EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASP 63 S L+ + SA A + A ++K L NPF+ M+KGIE++AK GV+V + A+ Sbjct: 7 LALSAGLLATIAPVSAHAEDAAKVAAIVKGLDNPFFQTMQKGIEEQAKASGVNVSVQAAA 66 Query: 64 SEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLK 123 + GD Q ++ +++ P+S NLV + +K +VN+D ID + K Sbjct: 67 NMGDATGQADRLTAMAMQDFDCYLVNPISVSNLVQALVPVAQKKKPIVNIDSTIDAEQAK 126 Query: 124 KAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK 183 AG V ++ TDNVA GA ++ L +G +VA+I G G+ AR G +A + Sbjct: 127 AAGFAVSTYIGTDNVAAGALAGEEMLK-LVPKGSKVALIAGIVGDVGSNARIKGFKQAVE 185 Query: 184 KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGK 243 ++++V ADWDR KAL AT++L +P++ + AND MA+GV +AV +GK Sbjct: 186 --GKLEVVVMVSADWDREKALTAATDILAAHPDLAGFFAANDIMALGVERAVQTSGK--D 241 Query: 244 VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 V V+G DGI +A K + AG+++ATVAQ P +GA GL+ A K ++ P + L Sbjct: 242 VKVIGLDGIVDALKSIAAGELSATVAQYPYVVGAMGLEACAVAAKGKEL-PANVPAPVLL 300 Query: 304 VDSIL 308 ++ Sbjct: 301 INKDN 305 >UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Clostridiales RepID=B8I0K4_CLOCE Length = 342 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 122/342 (35%), Gaps = 38/342 (11%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA-------------------------EYAVVLKTLS 35 M K L ++ + + Sbjct: 1 MKKKLIALLMCFSLVIAAGCGASDTNSSDSESSESAQSTSANDSGSNKLITIGFSQVGAE 60 Query: 36 NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN 95 + + V ++ + + ++ ++Q++ D +++ IA AP++ Sbjct: 61 SDWRVANTASMKSALSEKN-GFKLIFADAQQKQENQIKAVRDFISQDVDVIAIAPVTETG 119 Query: 96 LVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE 155 + A I ++ +D I + + +V +D G A ++++ + + Sbjct: 120 WETVLGEAKDADIPVIIVDRMIKVSD----DSLFSCWVGSDFQKEGVNAAEWLVNYMKEK 175 Query: 156 GG----EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVL 211 G V +++G G+++ R G + KK ++A Q ++ + K +V + L Sbjct: 176 GKTDKQNVVVLQGTIGSSAEIGRTKGFGDTIKKYDNFNILAQQTGEFTQAKGQEVMESFL 235 Query: 212 QRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVA 269 ++ +I + ND MA G A+ AGK V +V D + A K + AG M +V Sbjct: 236 KQYNDIDVVIAQNDNMAFGAIDALKAAGKAPGKDVTIVSFDAVKAAFKSMIAGDMNVSVE 295 Query: 270 QNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 NP G +L KV + + K+ + + + Sbjct: 296 CNPLH-GPRVAELAKKLMNDEKVEKIQYV-DEKVYPAEIAEK 335 >UniRef50_C6CXU6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU6_PAESJ Length = 330 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 130/332 (39%), Gaps = 33/332 (9%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAE--------------------YAVVLKTLSNPFWVD 41 NK+L L S + + A + ++ + NP+W Sbjct: 5 NKFLYIILFVLFIAFSSCAVYYAGKGMHYSNNISSGNVIDKPQLHLVLISQEYDNPYWRL 64 Query: 42 MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVA 101 +++G + A+ G+ ++ + P+ D + +++ E GI L + Sbjct: 65 VQQGAREAAQQKGIELE-YLGPARADVKEHIKILEMAIASKVDGIITQGLEENEFTPIIN 123 Query: 102 RAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAI 161 A + GI ++ +D A+V TDN A G +I K EVA+ Sbjct: 124 EAARMGIPIITVDSDA-------PHSKRVAYVGTDNYAAGYMAGRELIAKSAGR-AEVAL 175 Query: 162 IEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIY 221 I G ++ + R G +A K I ++ ++ RI++ A + Q+ P I Sbjct: 176 ITGSFTASNQKDRVRGFKDAVKTYPGIHIIDIAESNISRIQSAASAYTLAQKYPEIDTFV 235 Query: 222 CANDTMAMGVAQAVANAG---KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGAT 278 + +G+AQ + G + ++ D +PE ++ G + +T+ Q P +G Sbjct: 236 GTSALDGLGIAQMLKEMGSETLKTPIRIIAFDDLPETLTLINQGVIESTIVQQPFIMGRE 295 Query: 279 GLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 + L++D K K++ + K++ +T Sbjct: 296 SVNLLMDYLKGEKIV-TVYNTDVKVIHREDLT 326 >UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FWH4_SORC5 Length = 332 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 12/285 (4%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + + + K I+ EA+ V + + + +Q+ Sbjct: 42 ALTEIVVGFSQTGAESSWRIAHSKSIQAEAEKRHVQLLF--ADGQNVHNNQVNAVNGFIT 99 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K I AP SV + A + GI +V +D + E + D V Sbjct: 100 KGVDVIVIAPQESVGWKPTLKEAKRAGIPVVLTSRGVDAEEDL-----YETVMVADFVWE 154 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G + ++ + + + + G R+ G EA K +K++ASQ D+ R Sbjct: 155 GRRAGEWLAKQTNGK-ARIIELVGTPAADVAVMRKTGFAEAIAKHPDMKIIASQSGDFTR 213 Query: 201 IKALDVATNVLQRNP-NIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARK 257 K V +L + I A+Y ND MA+G QA+ AG +LV+ D + A + Sbjct: 214 TKGKTVMETLLSAHKGEINAVYAHNDDMALGAIQAIQAAGLKPGQDILVISIDAVKPAFE 273 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFK 302 + G++ ATV NP G + + KV P Sbjct: 274 AMMEGKLNATVECNPMH-GPLLFDTIDKIVRGEKVPKRTIVPGQI 317 >UniRef50_C2KRR4 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Actinomycetaceae RepID=C2KRR4_9ACTO Length = 326 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 129/321 (40%), Gaps = 23/321 (7%) Query: 3 KYLKYFSGTLVGLMLSTSAFAA------------AEYAVVLKTLSNPFWVDMKKGIEDEA 50 K L + + L S+ A+ + +V K + FW +KKG ++ Sbjct: 6 KVLALGAIACLSLTACGSSPASSDGKSADAKSNSKKIILVSKGFQHTFWQSVKKGALEKG 65 Query: 51 KTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYL 110 K LG V+ +E QL ++ N I A L S + + GI + Sbjct: 66 KELGYEVEFIGPKNETAVTEQLDQLKNALNAKPAAIGLAALDSKAAEPILQQIKNAGIPV 125 Query: 111 VNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNAS 170 + D +D D V TDN GAK A + +G +G V I+ + Sbjct: 126 IAFDSGVDSDIP-------LTTVQTDNRTAGAKAAEKLAQLMGNKG-TVGIVCHGQATTT 177 Query: 171 GEARRNGATEAFKKA-SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 G+ R G + K+ IKL+ Q AD +R KA D A +++ N ++ A+Y +N+ A Sbjct: 178 GKGRCFGFQDWMKEHAPDIKLLQEQWAD-ERGKAADAAKAIVKSNTDVTAMYGSNEVTAA 236 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 GV Q V AGK G++ +VG D +++G + Q P +GA + A K Sbjct: 237 GVLQGVKEAGKMGQITIVGFDSGKAQIDAIKSGDEAGAITQAPVKMGAETVAAADKAIKG 296 Query: 290 GKVIPLDKAPEFKLVDSILVT 310 + F D + Sbjct: 297 ESLEK-IIDSGFAWYDKSNID 316 >UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F472_THELT Length = 314 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 20/316 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL--GVSVD 58 M K L + + L +FA V + + + M + K V+ Sbjct: 1 MKKVLIFLLLIVTIL-----SFAKFRVGVAIPAADHGWTGGMVWWAQYAIKQYANDPDVE 55 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 + ++ Q+ + L K + P S L +A++ GI+ + +D I+ Sbjct: 56 FYLVTAKE-PSEQIAQVQALLAKGIDALVINPYESAPLTPICVQAFRDGIFTIIVDRGIN 114 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 + ++ DN G +I +KLG +G V +IEG + R Sbjct: 115 SEE-------YNVYIAGDNYMYGYLAGKYIAEKLGGKG-NVVVIEGIPSTINT-ERVEAF 165 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 +A + +K++A QP W R KA ++ +L + PNI A++ +D M GV A+ A Sbjct: 166 KKALEPYPNVKIIAQQPGYWSREKAFEIMQTLLTKFPNIDAVWTGDDDMLHGVLLALKQA 225 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSG--KVIPL 295 G+ +++VG KM+ G + P ++ +T + L V A K Sbjct: 226 GRDKNIVLVGGACEKNIVKMIMDGHPLIGVDFTYPPNMISTAINLAVMALKGEHLNGFYQ 285 Query: 296 DKAPEFKLVDSILVTQ 311 P ++ + VT+ Sbjct: 286 RGIPRKIILSTETVTK 301 >UniRef50_A8F3L8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F3L8_THELT Length = 321 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 19/318 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG--VSVD 58 M K+L + LS F A E A V+K + FW G ++ L V V Sbjct: 1 MRKFLLVLAMVF---TLSALVFGAYEIAFVVKATDSDFWQYTIVGAKNAEHDLQGLVKVT 57 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 ++ PSE D Q+ + ED+ I + SS + +A+++GI ++ +D + Sbjct: 58 VYGPPSEADIDKQVAILEDVIRTKPDAIVISSTSSHATAPALNKAYQQGIKIILIDNFV- 116 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG----GEVAIIEGKAGNASGEAR 174 +F+ T+N G A +++ L G G+V +I AG R Sbjct: 117 ------YDTGYHSFLATNNKVGGGLAAEKVVELLKKSGRPLKGKVGLISSMAGVQVLIDR 170 Query: 175 RNGATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVA 232 +G T K+ A ++++ ++ D D KA A +++ + + AI+ N+ GVA Sbjct: 171 DDGFTARLKELAPDLEILPTRYVDNDIAKAAAAAEDLITAYGDQLVAIFADNNHTGDGVA 230 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + + KV+ V D P+ + + G + A + Q+P +G G+ A + Sbjct: 231 RVIEEQNLQDKVIAVAYDSDPQEVEALRNGSLKALIVQDPHGMGYKGVMFAFMAINGETL 290 Query: 293 IPLDKAPEFKLVDSILVT 310 P +V + Sbjct: 291 -PSYFDTGVYVVTKENMD 307 >UniRef50_Q221W3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderiales RepID=Q221W3_RHOFD Length = 331 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 21/319 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF--------AAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 M K F L+ + L+ + AV+ K + PF+ D G + A Sbjct: 17 MKKLPPLFQFALLAIPLTLAVQMNATAKDVKDLRIAVIPKV-AVPFFDDCNNGAKAAADK 75 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 LGV P +Q+++ EDL +K GIA + ++ + +A GI +V Sbjct: 76 LGVQYQWVV-PQNTQGSTQVRILEDLISKKVDGIAISVNEPKSVEAAIKKAVASGIKVVT 134 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 D A ++ T N A G + + EG EVAI+ G+ G A+ Sbjct: 135 FDSD-------SANSGRSMYIGTINSAAGETMGESMAKAIDGEG-EVAILTGQLGAANLN 186 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV- 231 R G ++ K +IK+VA++ + D KA+ ++ + +P +K I+ + V Sbjct: 187 ERITGIKKSLSKYPKIKVVATEGTEDDLAKAVSTTESLFRGHPALKGIFGVSQVGGPAVS 246 Query: 232 -AQAVANAG-KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 A G K G V V D +P+ K V+ G + + Q P +G ++ +VD Sbjct: 247 KVMATKEFGSKKGAVKVFAFDDLPDTVKGVKEGYIQGIMVQRPVTMGKLAVEHLVDQITG 306 Query: 290 GKVIPLDKAPEFKLVDSIL 308 + P D +V S Sbjct: 307 KEPAPKDVDTGVNVVTSQN 325 >UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDT0_9FIRM Length = 326 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 111/289 (38%), Gaps = 11/289 (3%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 + + T +N F+ + + I K G + A S + Q + L Sbjct: 40 STEPRKIGATYMTYNNTFYSVINEEISRILKEHGDQL--IALDSAMSLKKQKEQIHYLIE 97 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + I AP+ L + A++ I ++ +D ++ N+ + +DN Sbjct: 98 QQVDAIVIAPVDYEGLEDSLKEAYRNRIPVIVVDTEVKH------NKNITYSIVSDNYDA 151 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G + A ++ KL + +++ SG R G + + K+V D Sbjct: 152 GVQCAKDMMRKLDH--ANIVLLQHS-TTRSGYLRIKGFEDTIQSNENYKVVKRMECDGQL 208 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A+ + ++ + C ND AMG A+++ V G DG PEA++MV Sbjct: 209 EVAMPKMESFIEEGIEFDVVMCLNDPSAMGAMAALSSNNILKDKYVYGIDGTPEAKEMVV 268 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G+M ATVAQ+P G +++ + ++ +++ V Sbjct: 269 EGKMAATVAQSPKTFGKKAGEVIYKLFSQETIKNKNEMSPVQIITKENV 317 >UniRef50_B0G4U9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0G4U9_9FIRM Length = 338 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 127/337 (37%), Gaps = 36/337 (10%) Query: 1 MNK----YLKYFSGTLVGLMLSTSAFAAAE--------------YAVVLKTLSNPFWVDM 42 M + + K V +L+ A E V + + + Sbjct: 1 MKRKNKIFRKVIIVLAVLALLTGCAGQEPEAEDTRTPTDDNLIVVGVSQEGSESVWRTAN 60 Query: 43 KKGIEDEA-KTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVA 101 + +++ K G + + ++Q++ ++ I F+P+ + Sbjct: 61 TRSVKETLTKENGYFLIFK--NARQKQENQIKALRSFISQRVDYIVFSPIVEDGWDTVLR 118 Query: 102 RAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA-----EG 156 A + I ++ +D KI++ + A+V +D V G ++ D L + Sbjct: 119 EAREAEIPVILMDRKINVKDE----SLYTAWVGSDFVEEGRNAGKWLEDYLKGQRFNDDQ 174 Query: 157 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN 216 + +++G AG + R G E K ++ AD+ K + +L P Sbjct: 175 VNIVVLQGTAGTTAMFGRTQGFEEIAAKHENWNILEQTNADFTTAKGEEEMRRLLNTYPE 234 Query: 217 IKAIYCANDTMAMGVAQAVANAGKT----GKVLVVGTDGIPEARKMVEAGQMTATVAQNP 272 I + ND M G +A+ +AG+T G + V+ DG +A + V+ G + V NP Sbjct: 235 IDVLVSQNDDMTFGALEAIQSAGRTTGTGGDITVISFDGTKKALEKVKTGAINVDVECNP 294 Query: 273 ADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G ++ ++ A ++G+ I D E K+ V Sbjct: 295 Y-QGKY-IEEIIQALETGQSIEKDNYVEEKVFTQKNV 329 >UniRef50_A1AYL7 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Proteobacteria RepID=A1AYL7_PARDP Length = 348 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 10/287 (3%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + V K L+N +W + +G ++ GV + A+PSEGD QL + E++ + Sbjct: 54 EGTQIGGVSKALTNEYWRSLGEGYKNMTDAQGVGLAYQAAPSEGDQLGQLSIAENMILQG 113 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 Y+G+ +P + NL + A +GI +VN+++ + + +V G Sbjct: 114 YQGLLVSPQTDNNLQPAMETAASRGIAVVNVNDAVIPSATQ--------YVGNVQRDNGV 165 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 + A + ID GG+VA IEG+ G + R +G T +A ++VAS PA+W R + Sbjct: 166 RVAQWFIDN-RPGGGKVAAIEGQPGVFAAGQRTDGFTTTITEAGNFQVVASVPANWSREQ 224 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A D A+ +LQ++P++ Y ND MA+GV +AV A +V V GTDGIP+A + AG Sbjct: 225 AYDAASTILQQHPDLIGFYANNDGMALGVVEAVKAANLQEQVSVFGTDGIPDAYASIRAG 284 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 +T TV P G +++++ + IP A L+ + V Sbjct: 285 DLTGTVDSFPVLTGEVAMEVVLRLLAG-QGIPRVVATPQALITADNV 330 >UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-binding protein n=9 Tax=Actinomycetales RepID=B5GEU2_9ACTO Length = 367 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 128/289 (44%), Gaps = 12/289 (4%) Query: 23 AAAEYAVVLKTL-SNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 A+A +NPF + ++DEA+ GV + A ++ F Q+ +DL K Sbjct: 79 ASATVGFSQSEKEANPFRIAETASLKDEARKRGVKL--LAVNAQSQFSKQISDVQDLIAK 136 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 + APL+S + A K I +V +D KI+ + +F+ +D V G Sbjct: 137 GADLLVIAPLNSDGWEPVLRAASAKKIPIVTIDRKINA----GPCKDYVSFIGSDFVEQG 192 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE-AFKKASQIKLVASQPADWDR 200 + A +I+ G +G EVAI+ G AGN R G + +KA +K+V Q D+ R Sbjct: 193 RRAADKMIEATGGKG-EVAILLGAAGNNVTTERTKGFKDRVAEKAPGLKVVFEQTGDFAR 251 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMV 259 K V ++Q P IK IY ND M +G A+ +AGK G V +V DG A K + Sbjct: 252 EKGQSVTEQLIQSKPGIKGIYAENDEMGLGAVNALKSAGKKPGAVKIVTVDGTRNAVKQI 311 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G ++ + NP G + + K +V D + D Sbjct: 312 VDGWISGVIESNPR-FGPLAFQTLDTFTKGEEVQ-QDIVIKDSAYDKTN 358 >UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P063_9CLOT Length = 326 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 12/288 (4%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + T++N F+ + I + + G + D + Q + + L + Sbjct: 44 KKLFGATYMTMNNEFYKIVNNQIRMQVEKNGDQMITL--DPALDQKKQNEQIKQLVKRKV 101 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I P+ + + A K I ++ +D ++ +L V + +DN G Sbjct: 102 DAIFLNPVDWKAVEPGLVAAKKAKIPVIVIDSQVYRSDL------VAMTIVSDNYKAGVL 155 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A ++ + + + ++ A S R NG + K K++AS +A Sbjct: 156 CAKEMMKQ--KDQANIVLLTHNA-ARSAVDRINGFLDTIKNNKNYKILASADTQGQIERA 212 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 L +++ NI + ND AMG A+ + G VLV G DG PE +K+++ G Sbjct: 213 LPKVDKIIEEYQNIDVVMGLNDPAAMGALAALDSKGAREGVLVYGIDGSPEGKKLIKEGM 272 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 MT T AQ+P + T + + KV +++ V Q Sbjct: 273 MTGTAAQSPKQMADTAVNAAYQILQGEKVEKKKVI-SVQMITKKNVEQ 319 >UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacteria RepID=A1WLB7_VEREI Length = 328 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 88/298 (29%), Positives = 139/298 (46%), Gaps = 16/298 (5%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 + + A + TL +PF+V +K+G E AK G + + GD Q Sbjct: 25 LTPVAHAAGLKIGFSQVTLQSPFYVQLKEGAEAAAKAGGDELIFL--DANGDVNKQNNDI 82 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 +DL + + P++ + +A A K G+ ++ +D I+ GG V A + Sbjct: 83 QDLLTRKVDVLIINPVNPDAVKPAIAAAQKNGVPVITVDRSIN-------GGGVTAHLGR 135 Query: 136 DNVAVGAKGASFIIDKLGAEG---GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 DNV +G ++ +L +G G+V I+G AG ARR+G +A K S K+VA Sbjct: 136 DNVKMGKAVGDAVLAELKKKGTTRGKVIEIQGDAGGTVMAARRDGFHDALK-GSGFKIVA 194 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 A++ R A+ ++LQ +P++K +Y ND MAMG + +A AGK V V G DG+ Sbjct: 195 GPYAEYTRANAVTAMQDLLQAHPDVKVVYAHNDDMAMGALKVLAEAGKK-DVFVAGVDGL 253 Query: 253 PEARKMVEAGQMT-ATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 EA + G AT +P +G ++ A K+GK +P K V V Sbjct: 254 SEALASMAGGDQYVATALNDPRYLGDMTVQTA-RAIKAGKKVPAFVDAGTKAVTKANV 310 >UniRef50_C5ERG9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERG9_9FIRM Length = 355 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 107/294 (36%), Gaps = 10/294 (3%) Query: 20 SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLS 79 + T S + V + + A+ G + + ++ + + Q+ EDL Sbjct: 63 GGEKKLKIGFSESTYSGAWRVAEVEDVTKYAEMNGYEL--IMTNADSNIEKQIGDVEDLI 120 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 + I P+ + + GI ++++D + K + + +D Sbjct: 121 AQKCDLIVIVPVDANAVAPAFEACKSAGIPVIDMDTQ---YLDGKWKEDFITTIRSDQYQ 177 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 G A + + +G + V I G G + + R G E S IK++ Q +W Sbjct: 178 QGQGCAEWTVGHVGDKDTTVLEITGNPGQSDAQNRSRGFNEYVADHSNIKVI-QQNGEWS 236 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARK 257 R A +V NV Q IYC +D MA+G + AG V +V DG EA Sbjct: 237 RATAQEVVQNVAQSGQKFDVIYCHSDEMALGALLGLKQAGLKPNEDVWIVAVDGQKEALD 296 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ++A ++ A + P G + ++ + + + V + Sbjct: 297 AIKADEIGAIITCTPKG-GDVLFDCINKYFAGDELEEEYFVHQST-ITTENVDE 348 >UniRef50_C4G7J1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7J1_ABIDE Length = 360 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 142/304 (46%), Positives = 188/304 (61%), Gaps = 5/304 (1%) Query: 9 SGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDF 68 S + G + S +YA+VLKT S+ FW DMK GIE+EA LGV VD+ + +E D Sbjct: 53 SASKSGTGSTASVAGEEKYAIVLKTQSSQFWQDMKAGIEEEAAKLGVKVDVQSGNTEDDV 112 Query: 69 QSQLQLFEDLSNKN-YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 + Q+Q+ E+ + YK I AP+S VNL +A KGI +++DEKID L + GG Sbjct: 113 EGQVQVLENFVSTGEYKAIGVAPISDVNLNNAIAEGCSKGIVFIDIDEKIDAKALGELGG 172 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 + A+V TDN VG GA ++ ++G EVAIIEGKAG SGE RR+ +A +A+ Sbjct: 173 GLYAYVATDNKEVGETGAGELLKQVGNN-AEVAIIEGKAGALSGEQRRD-GAKAAFEAAG 230 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 KLV SQPADWDR KA+DVATN++ NPN+KAIYC NDTMAMG +AV +GK + V Sbjct: 231 AKLVDSQPADWDRTKAMDVATNMISANPNLKAIYCCNDTMAMGAVEAVKKSGK--DIKVC 288 Query: 248 GTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 GTDG +A K V G++ ATVAQNP +GAT L LMV A K + ++ Sbjct: 289 GTDGNDDAIKAVADGELAATVAQNPKLVGATALNLMVKAVKENAKPEAGAEVTQTGIAAV 348 Query: 308 LVTQ 311 L+T+ Sbjct: 349 LITK 352 >UniRef50_A7V0S7 Sensor protein n=6 Tax=Bacteroides RepID=A7V0S7_BACUN Length = 919 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 17/309 (5%) Query: 4 YLKYFSGTLVGLMLSTSAFAAA-EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS 62 + +F L G+ ++ S A V + + + M I EA V++ Sbjct: 7 RILFFLLVLWGVAVACSRREARFRIGVSQCS-EDEWRRQMNSEILREAHFYE-DVEVDIR 64 Query: 63 PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNL 122 + D Q + +L + + AP + + V A+ +GI ++ +D KI D Sbjct: 65 TAVDDNDRQAKDIRELIAEGVDLLIVAPNEATPITPVVEEAYNRGIPVIVVDRKILSD-- 122 Query: 123 KKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF 182 A+V DN +G ++ + L +G V I G G+ R G +A Sbjct: 123 -----KYTAYVGADNYEIGKAVGEYVANVLHGQGD-VVEISGLVGSTPAVDRHQGFVKAI 176 Query: 183 KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTG 242 I+L+A + W ++KA + +L R P+I +Y ND MA G A A G+ Sbjct: 177 SAYPGIRLLAVEDGAWLQLKAGEKMDTLLSRFPHIDLVYAQNDRMAAGAYAAAAREGREK 236 Query: 243 KVLVVGTDGIPE---ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 + +G D + + V AG++ AT G +++ +D + P + Sbjct: 237 DMRFIGIDALSGKDYGVEKVLAGELDATFIYPTG--GDRVMQIAMDILN-KRDFPRETIL 293 Query: 300 EFKLVDSIL 308 +VD Sbjct: 294 GTSVVDRDN 302 >UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL2_EUBSP Length = 321 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 126/323 (39%), Gaps = 26/323 (8%) Query: 1 MNKYLKYFSGTLVGLMLS------------TSAFAAAEYAVVLKTLSNPFWVDMKKGIED 48 M K +M + + KT S+ F + ED Sbjct: 1 MKKRFLGVLLVGAMVMSTVLTGCGNKKESKSGGEDKITIGFSSKTNSDTFVKAIADAAED 60 Query: 49 EAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGI 108 AK GV + + +EGD Q+ E L + + P V+ A + I Sbjct: 61 AAKEQGVDL--IMADAEGDVNKQINDCETLIAQQVDALIVIPQDVEGSAPVVSMANEADI 118 Query: 109 YLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGN 168 ++ + I N AFV + G ++ D + G ++ IIEG G Sbjct: 119 PIIICNGDIADK-------NYTAFVGCTDQESGEILGTWFNDNV-EHGSQICIIEGPMGQ 170 Query: 169 ASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTM 227 + R G E ++++ Q A+W R +A+ +A + L + +KAI C ND M Sbjct: 171 SGQVGRYAGFEEV-GMLDNFEVLSCQTANWKRDEAMALAEDWLTTYGDKLKAIVCENDDM 229 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 AMG A AG+T V++ G DG+ +A + V+ G++ +V Q+ A G +++ + Sbjct: 230 AMGALSACKAAGRT-DVVIGGVDGLEDAIQAVKDGELGVSVLQDSAGQGEGAVEVALQII 288 Query: 288 KSGKVIPLDKAPEFKLVDSILVT 310 + P F + S V Sbjct: 289 NGEDYQKDTRIP-FHAITSDNVD 310 >UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A6VWF2_MARMS Length = 322 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 21/318 (6%) Query: 2 NKYLKYFSG-TLVGLMLSTSAFAAAEYAVVLKTLSNPF-----WVDMKKGIEDEAKTLGV 55 NK ++ + T++ + TS A + + + + + + W K + +AK + Sbjct: 5 NKIMRLIAVFTMLFAFVGTSYAAKYKIGISVPSADHGWTAGLLWWANKAAADLKAKEKDI 64 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + AS S Q+ EDL K + P + L + A+ +GIY V +D Sbjct: 65 EFFVVASSSG---SKQVGDVEDLMIKGIDALVILPHNPATLQKVIEEAYDEGIYTVVVDR 121 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 ++ F+ DN +G GA ++ ++ +G V +IEG + R Sbjct: 122 ELAHPAQN-------VFIAGDNAGLGRVGAQWLAKEMSGKG-NVVVIEGLQ-IPINKQRV 172 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 + + IK++ SQP DW KAL V N LQ++P I A++C +D M GV +A+ Sbjct: 173 DAFNDVIAGYPNIKILDSQPGDWSTQKALSVMENFLQKHPKIDAVWCQDDDMLKGVLKAI 232 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQ--MTATVAQNPADIGATGLKLMVDAEKSGKVI 293 +G+T V+G G + +M+++G + ATV +P + A+G+ L V K K+ Sbjct: 233 EESGRTDIKTVLGGAGSKDIIEMIQSGNKMVRATVTYSP-SMIASGIALAVHGVKHEKLG 291 Query: 294 PLDKAPEFKLVDSILVTQ 311 L P ++ + LVT+ Sbjct: 292 YLYHEPSRVILGADLVTK 309 >UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI72_RHISN Length = 367 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 70/290 (24%), Positives = 119/290 (41%), Gaps = 12/290 (4%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLG----VSVDIFASPSEGDFQSQLQLFEDLS 79 + L T + ++ + G+++E G + + + A S+ Q++ E Sbjct: 70 PLKLGF-LPTAMDTYYQRVLAGVKEEIDKRGGAEAIELLVQAPSSQSATDDQIRAMEAWI 128 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVA 139 N IA A + L+ + RA + GI + + + V D Sbjct: 129 NDGIDAIAVALYNEGALLPSIRRATEAGIPVFLFNSPFAD------NPYYVSDVGYDQSD 182 Query: 140 VGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWD 199 G A +I+D G + ++ I+EG G R G E K K+VA QPA W Sbjct: 183 GGRAQAQWIVDTYGDKEVKIGILEGLPG-PHTSQRMKGFNEIISKHPNFKIVAQQPAGWV 241 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 R + L V N+ NP+I+ + D MA+G QA+ G GKV +VG + + EA + Sbjct: 242 RAQGLSVTENMFTANPDIEVLVALYDEMALGGLQALKAKGLNGKVAIVGYENMKEANAAI 301 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 G +ATV + G ++ + + G +P K+ D+ + Sbjct: 302 LTGDFSATVDTGAKEEGRNIVRAVDEFLMKGNPLPKKIFVSPKVYDATNI 351 >UniRef50_B7GJK7 ABC-type sugar transport system, periplasmic component n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK7_ANOFW Length = 332 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 124/287 (43%), Gaps = 11/287 (3%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 ++ + NP+W +++G ++ K V+++ + P Q++L E Sbjct: 53 PHVILISQEFDNPYWRKIEQGAKEAGKNYDVNIE-YIGPLRTSVDEQVKLLEKAIASRVD 111 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 GI L + + +A + I ++ +D A+V T+N G Sbjct: 112 GIIVQNLKDEAFIPLIDKAISRNIPVITIDADA-------PKSRRIAYVGTNNFEAGQLL 164 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 ++ ++ E E+ ++ G + + R G + ++K+V+ ++ RI+A Sbjct: 165 GKAVVSRVEGE-RELGVMIGTDTSENQRLRLQGFLSVIAEHPRLKVVSVASSNISRIQAS 223 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 A +L+++P+I + + A+G+ A N + + + G D + E + ++ G + Sbjct: 224 IQAEQMLRKHPHISVMVGTSALDAIGIRMATKNLHRQ-DIQIFGFDDVEETIEAIQQGDI 282 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 ATV Q P D+G + +KLMV+ ++ +++D V Q Sbjct: 283 VATVVQKPYDMGYSAVKLMVEHLSGKQIQKEH-FTAIEVIDRQNVQQ 328 >UniRef50_A4XG54 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Clostridia RepID=A4XG54_CALS8 Length = 345 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 20/300 (6%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 EY +V +W KG++ A GV I+ + D Q+ + + Sbjct: 44 GSPKEEYYMVTFASGIEYWKGCFKGMKAAADLYGVKA-IYTGAPQFDVNQQVTVLRQVIA 102 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 K GI + L P+ A KKGI ++ D + + T N Sbjct: 103 KKPAGILVTCANPDALKAPIDEAIKKGIPVITFDAD-------SPKSLRYSVLETGNYNA 155 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVASQPADWD 199 GA A ++ LG +G I A + E R+ G + KK IK+V+ + D Sbjct: 156 GAMAARYLGKLLGGKGE--VGISTVAAQLNHEQRKQGFIDTLKKEFPGIKVVSIVNDEND 213 Query: 200 RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMV 259 KA +LQ +PNIK I+C + +GVA A+ A K GK+ +V D ++ Sbjct: 214 STKAARGVAAMLQAHPNIKGIFCTDAPGGVGVATAIKEANKVGKIKIVSFDTDKGTLDLI 273 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA--------PEFKLVDSILVTQ 311 + G + A++AQ ++G G+ + K G V P+D P + +++VT+ Sbjct: 274 KQGVIDASIAQGTWNMGFWGMTFLF-YLKHGIVNPVDNWKKFGINPLPPYVDTGTMVVTK 332 >UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZZ1_MARMS Length = 294 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 18/309 (5%) Query: 1 MN--KYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVD 58 M K + L + A L T S+PF++ + G+++ AK +++ Sbjct: 1 MKNLKRFTAIAVALASASFNLYAKDEPVVCASLLTQSHPFYIALGNGLKEGAKLQHINLK 60 Query: 59 IFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 118 + + D Q+ ED KN I +P+ S + P+ +A + I ++ +D + Sbjct: 61 VSV--ANQDLAKQINDIEDCITKNVDAIVISPVDSKGIRGPLKKAERANIPVITVDIGAE 118 Query: 119 MDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGA 178 + + + TDN G + +LG +G +V ++ G +S EAR G Sbjct: 119 -------NSKIVSHIATDNYGGGVVAGKLAVKQLGGKG-QVVMLSY-PGISSVEARLQGF 169 Query: 179 TEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 +A + IK+VA QP R +++ N+LQ NP+ I+ D M +G AV Sbjct: 170 RDAVAD-TDIKIVAVQPGK-TREESMTSTINMLQANPDTDLIFAFGDDMMIGAGLAVTKQ 227 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQ-MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 K +V+G DG+PE K V+ + V Q+ +G T +K++ D +V Sbjct: 228 --KSKAVVIGFDGMPEGIKAVDENDHIIGVVKQDADAMGKTAMKVVADYLNGKEVKSEYP 285 Query: 298 APEFKLVDS 306 Sbjct: 286 IVPVLYTGK 294 >UniRef50_A5FY95 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY95_ACICJ Length = 329 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 10/285 (3%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 A+V ++PF++ M+ G EAK LG+ + S ++Q+ + L K+ Sbjct: 36 KTIALVPGIATDPFYITMQHGAAAEAKKLGLHLIWQGGSS-FSPETQIPALQALLAKHPA 94 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + AP + L+ P+ + GI ++++D I + K + +T++NV GA Sbjct: 95 ALLVAPTNEKALINPIRQFIAAGIPVISVDTTISDTAILK------SRITSNNVQGGASA 148 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A I +G VA+I K G ++ +AR+ G K +K+VA + D KA Sbjct: 149 ARAIAGFAHGKGD-VAVINVKPGISTTDARQKGFLAQMKHYKGMKVVAIEYDDDSPTKAF 207 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 A +L + P++K I+ N GV +AV AGK GKV VVG D P K+++ G + Sbjct: 208 TEAQLLLLKYPHLKGIFATNVFSGEGVGKAVVAAGKKGKVDVVGYDAEPGEVKLLKQGVI 267 Query: 265 TATVAQNPADIGATGLKLMVDAEKSG--KVIPLDKAPEFKLVDSI 307 + + Q PA+ G G+K D +V + + + Sbjct: 268 STLIVQRPAEEGRLGVKYAYDILTGKSAQVPASKRLANITVTTAE 312 >UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKL8_9FIRM Length = 325 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 124/329 (37%), Gaps = 30/329 (9%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA--------------------EYAVVLKTLSNPFWV 40 M K + + + M++ + + + + + N F V Sbjct: 2 MKKKMLAVAVCVSMCMMAFAGCTSESGGGSDKKAEQTEGKKEESGKVFMTVSNQQNEFMV 61 Query: 41 DMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPV 100 M + ++ + G V + ++ D Q+ E ++N + I P S L + Sbjct: 62 GMAENFKEVGEAAGYEVQLM--DADLDATKQVSQIETAISENAEAILVEPCSVDGLTTGL 119 Query: 101 ARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVA 160 A GI + + + +L V + + D G +I G + ++A Sbjct: 120 KEAHDAGIPVFVIHNNVSATDL------VTSLIHVDVRQGGELKMEQVIKDCGED-AKIA 172 Query: 161 IIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAI 220 I+ G G + G +K +++V +W A +A N L I AI Sbjct: 173 IMTGTLGQDTTNQICGGYDAVLEKYPNVEVVFEGAGNWGATDAAPLAENWLASGKEIDAI 232 Query: 221 YCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGL 280 C ND MA+GV + +AGK+ ++ V G D E K V++G+M AT+ + Sbjct: 233 VCNNDGMALGVVSVLKSAGKSEQIKVYGLDATNEGLKAVDSGEMAATIYVDSKAEIEKAF 292 Query: 281 KLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 +++ D + KV K P LV V Sbjct: 293 EMLEDLKAGKKVDAEYKVP-SVLVTKENV 320 >UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSY2_BACS4 Length = 314 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 17/316 (5%) Query: 1 MNKYLKYFSG---TLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL--GV 55 M K L +VG TS + + + ++ + + + ED+AK L Sbjct: 1 MKKVLFLLVASILLIVGCSEDTSGDGETVLGLAMPSATHGWMGALIQNAEDQAKALVEDG 60 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 ++D + + + +Q+ EDL + I P+ S L + + GI LV +D Sbjct: 61 TIDDYIFTTADNPSAQVNNVEDLIAQGVDAIVMLPIESDALSPIALQVEEAGIPLVIVDR 120 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 ++ D V DN G + +++LG G +V I G N+ + R Sbjct: 121 ELTNDA-------ATVVVKGDNYGAGVNAGEYFMEQLGGNG-KVVEIAG-PSNSVTQQRS 171 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 +G EA + S I++VASQ ++ +L V N+L P I A+Y +D MA+GV QA+ Sbjct: 172 DGFREAI-EGSDIEIVASQSGEFSTETSLQVMENILTSQPEIDAVYTQDDGMALGVLQAI 230 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVE-AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 A +T + G G + +++ G +TAT +P + G+ + D Sbjct: 231 NEANRTDIQFITGVAGSKDVYEIIMDDGLITATFLYSP-LMVKEGVIIGADLANGEDPDS 289 Query: 295 LDKAPEFKLVDSILVT 310 + V V Sbjct: 290 AEVVVPATPVTKDNVD 305 >UniRef50_P39325 ABC transporter periplasmic-binding protein ytfQ n=141 Tax=Bacteria RepID=YTFQ_ECOLI Length = 318 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 120/308 (38%), Gaps = 13/308 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L S M S + A + + + EA+ G+++ I Sbjct: 1 MWKRLLIVSAVSA-AMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKI- 58 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + ++Q++ + I AP+ + + A I + LD ID+ Sbjct: 59 -ADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVK 117 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 + VT DN+ G +++ ++ + V ++G G + R+ G E Sbjct: 118 DK----SLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAE 173 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQR---NPNIKAIYCANDTMAMGVAQAVAN 237 A K A IK++ SQ D+ R K +V + ++ NI +Y ND M +G QA+ Sbjct: 174 AIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKE 233 Query: 238 AGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 AG +L DG+P+ K + G+ A+V P ++ + +K G + Sbjct: 234 AGLKPGKDILTGSIDGVPDIYKAMMDGEANASVELTP-NMAGPAFDALEKYKKDGTMPEK 292 Query: 296 DKAPEFKL 303 + L Sbjct: 293 LTLTKSTL 300 >UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales RepID=C5EPY8_9FIRM Length = 356 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 122/302 (40%), Gaps = 17/302 (5%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL---GVSVDIFASPSEGDFQSQL 72 S A+ ++ N + M++ EA+ L GV + + + S D Q+ Sbjct: 40 AAKPSNDGGYVVALCNYSIGNSWRAQMEQEFVAEAEKLKAEGVVSEYYITNSNDDINKQI 99 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 +DL K GI S L V A + GI +V+ D +D D A Sbjct: 100 SDMQDLITKKVDGIVITAASPTALAPAVEEATEAGIKVVSFDNVVDTDEQ-------VAT 152 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 V D G A +++ KL +G ++ ++ G AG A+ R NGA E FK+ I+++ Sbjct: 153 VGIDQTEFGRVCADWLVKKLDGKG-KIVVLNGIAGTANDTMRWNGAEEVFKQYPDIEILG 211 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 S A WD + ++L P I ++ M G A AG+ K++ + ++G Sbjct: 212 SANASWDYAQGKAAMESMLSAYPEIDGVWSQGGAMTQGAIDAFIAAGR--KLVPMTSEGN 269 Query: 253 PEARKMV---EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 A + ++ +P GA L+ ++ + +V P + +V V Sbjct: 270 NGALRAWIENRDNGLSCIAPSDPTYSGAEALRTVIKSLDGEEV-PKRVTLDIPVVTEDNV 328 Query: 310 TQ 311 + Sbjct: 329 DK 330 >UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB2_9BACT Length = 327 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 18/313 (5%) Query: 2 NKYLKYFSGTLVGL-----MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 + L LVG + A + +AV +TL+NPF+VD+ G++ G Sbjct: 21 RRLLLCSLIVLVGCEKKPAPDTAGAAGSRFFAVSFQTLNNPFFVDLNDGLKQVIDEHGDR 80 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + ++ Q D+ + I P++ ++ + A I ++ +D Sbjct: 81 L--VTLDAQFSSLKQKNDLSDVIEQKPAAIFLNPVNWESVRATLIAARNAKIPVIVVDAP 138 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN 176 + +L V A V +DNVA G A + D +VAI++ N + R Sbjct: 139 VPDADL------VLAQVASDNVAAGRLAAQALGDA--RPQAKVAILQYSV-NKACVDRVA 189 Query: 177 GATEAFKK-ASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G T+ K ++A Q V ++L R P++ A++ ND A+G A+ Sbjct: 190 GFTDVLAKSFPGATIIARQDVKGTSEATRPVMRDLLGRFPDLDAVFPINDPGAIGCVSAI 249 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 AG++GKVLVV DG EA + + G + +T AQ P IG+ D V Sbjct: 250 DAAGRSGKVLVVTVDGSREAAQFILNGGIHSTSAQFPKKIGSLAAGAAYDHLAGKPVDKE 309 Query: 296 DKAPEFKLVDSIL 308 K P LV Sbjct: 310 IKVP-VTLVTKAN 321 >UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9BACT Length = 878 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 120/312 (38%), Gaps = 18/312 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M ++L TL+ S + V + + + + +V + Sbjct: 3 MKQWLYILIFTLLFSACSDNNVKKYVIGVSQCSEDI-WRDKLNNELVMSTYQH-DNVTLK 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + + + Q Q E + + +P + + +A+ GI ++ D K D Sbjct: 61 FASANDNDRLQKQQIEQFIKEGVNLLIVSPNQIHTISSVIDKAYDAGIPVILFDRKTDSK 120 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 AF+ DN G + +FI +L +G +A I G ++ R G + Sbjct: 121 -------KYTAFIGADNYEAGYEIGNFIGQQLDGKG-NIAEICGLQASSPAIERNRGFMD 172 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVL-QRNPNIKAIYCANDTMAMGVAQAVANAG 239 A K S IK++A + DW + + +VL Q I+ ++ ND MA+G Q++ Sbjct: 173 ALKDYSGIKVIARKHGDWVKESGVMAMDSVLSQAKEPIQYVFAQNDRMALGALQSIKKHK 232 Query: 240 KTGKVLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 G + +VG D +P + V G + A+ G + ++L ++ + K D Sbjct: 233 VKG-IRIVGIDALPVPGGGMENVRDGNLEASYIYPTR--GDSVMQLALNILE-KKPYKRD 288 Query: 297 KAPEFKLVDSIL 308 + LV Sbjct: 289 NYLKGALVTKAN 300 >UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Clostridiales RepID=C2L0R0_9FIRM Length = 333 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 17/289 (5%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 A V L ++ F+ ++ +E++AK G ++D+ + GD QL +D K Sbjct: 57 EAKTIGVSLLNSTHVFYNSIQTAMEEQAKEYGWTLDVQ--DAAGDANKQLGQVQDFITKK 114 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 I AP +S + A K GI + +D + G V TDN G Sbjct: 115 VDAIVIAPTNSAGSKSMIELAEKAGIPVFTMD--------IASDGKPVTHVATDNKKGGQ 166 Query: 143 KGASFIIDK-LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDR 200 A ++++ L + G VA+I S R G T+ K+ IK+V Q D+ Sbjct: 167 LAAEYVVNNILTEKKGNVAVITYSE-IESCVDRETGFTDYLKENAPDIKVVDVQNYSGDQ 225 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 KA DV N+L +N NI ++C D A+G ++ A K+ +G DG PE ++ Sbjct: 226 QKAADVMQNMLLKNDNIDVVFCVGDPAAIGALSSITAANAATKI--IGYDGNPEGVAEIK 283 Query: 261 A-GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 G A VAQ+PA IG T L+ + + KV + ++D+ Sbjct: 284 KGGNWVADVAQDPAGIGKTTLEAIKKHLEGEKVDSEILIAPY-IIDAKN 331 >UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protein n=23 Tax=Yersinia RepID=A4TI53_YERPP Length = 319 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 125/319 (39%), Gaps = 16/319 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L V + +S SA + +TL+ F+ + + ++ AK G ++ Sbjct: 1 MKKRLIGLLLAGVTISMSVSAAEPLKIGFANRTLNGAFFNGLTEYMKIHAKEKGYTL--I 58 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + GD Q+ ED+ ++ + P + A + G+ V LD I ++ Sbjct: 59 TTDARGDLNKQIADVEDMLSQGINYLILNPQDPQAGLRITEIAKRAGVPTVILDSDIALE 118 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 V V +N + + + G + + G GN G+ARR+ Sbjct: 119 AP------VITRVQANNAKNNNLIGEYAVGQFGDKPMNCIFLSGNQGNLVGQARRDNFLL 172 Query: 181 AFKKA-------SQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVA 232 +A + + ++ +WD+ L +++ + I +Y D MA+G Sbjct: 173 GVAEAQLRKYNRTNVNFLSQGWGNWDQQGGLKAMEDIIVAQGDKINCVYSEMDDMALGAI 232 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 +A+ A K V V DG + + V+ G++ AT + NP + +T L+++ + Sbjct: 233 RALKAANKLDNVKVYAHDGYKKGLEAVKKGELQATASNNPDLLTSTVLEVIGQYQAGQTS 292 Query: 293 IPLDKAPEFKLVDSILVTQ 311 P L+ V + Sbjct: 293 FPDYVYIPSILITKDNVDK 311 >UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and transport protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C56B8 Length = 349 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 119/328 (36%), Gaps = 24/328 (7%) Query: 1 MNKYLKYFSGTLVGLMLSTSA--FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS-- 56 M + Y V + S A V+ K LS+ W +++G E A L Sbjct: 1 MARVHLYLLLAAVLPIASGCARRGEEYTIVVIPKGLSHEHWQSVRRGAERCAADLEAEDG 60 Query: 57 ----VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 V E D Q+++ + + AP S + V RA G+ +V Sbjct: 61 TRVRVIFDGPLRERDALEQIRIVDRRVATGASALVLAPQHSATMTACVKRAADAGVPVVI 120 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL---GAEGGEVAIIEGKAGNA 169 +D +D N +V TDN G +I +L + ++ + G+ Sbjct: 121 IDSGLDDPNH------FVKYVATDNYNGGRLAGRHLIRELQRRRKDKPKLILFRYAVGSQ 174 Query: 170 SGEARRNGATEAFKK-ASQIKLVASQ-PADWDRIKALDVAT-NVLQRNPNIKAIYCANDT 226 + E R G + K+ + +++ A R A+ A +LQ + I+ N++ Sbjct: 175 ATEDRERGFEDEVKERCPGAEWLSTDKYAGATRDSAMREAGPLILQFGNQVDGIFAPNES 234 Query: 227 MAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDA 286 A G A + G KV ++ DG + ++ G + ++ Q+P +G V Sbjct: 235 SASGTADVLRAQGLNQKVALMAFDGSKPLLQSIQQGDVIGSILQDPYRMGYLSAWYCVRH 294 Query: 287 EKSGKVIPLD----KAPEFKLVDSILVT 310 + + + L+ + VT Sbjct: 295 LRGEDMNNGRREMSEGTGEYLITAENVT 322 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 123/305 (40%), Gaps = 16/305 (5%) Query: 8 FSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD 67 T + + V + +NPF+ K E K++G V + D Sbjct: 24 IGLTGCATASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGAEVLSQV--ANED 81 Query: 68 FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGG 127 Q+Q + K I + + V RA GI ++ +D + Sbjct: 82 VQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDNQ---------SK 132 Query: 128 NVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ 187 N +TTDN G + DKLG +G ++AI+ G ++ + R G + Sbjct: 133 NATVNITTDNKQAGEISCRSLADKLGGKG-KIAILNGTP-VSAVDDRVTGCKGILGQYPD 190 Query: 188 IKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 IK+VA Q + R AL +AT++L NP++ + ND A+GV A G + V++ Sbjct: 191 IKIVADQRGENSRDSALPIATDILTANPDLDGFFAINDPSAVGVQLAAEQKGAS--VVIT 248 Query: 248 GTDGIPEARKMVEA-GQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDS 306 DG A + A G +TAT AQ+PA + + L + + +LVD+ Sbjct: 249 SVDGASSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKEPDQKVILVPTELVDA 308 Query: 307 ILVTQ 311 V + Sbjct: 309 SNVAK 313 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 14/274 (5%) Query: 18 STSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 A A + VVL ++N F+VDM +G A+ G V ++ D +Q+ L Sbjct: 51 GQPAGGADKIVCGVVLIDMTNQFFVDMIEGGNKAAEDYGCEVIWKSADGNFD--NQISLI 108 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ + I PL S L + +A GI + + ++D++ Sbjct: 109 ENFIEQGVDCILVDPLDSEGLKPVIEKASAAGIPTITMAGQVDVETNYTTVY-------- 160 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 ++ A +G EG + A++ G GN + R+ G +K I +V QP Sbjct: 161 NDEENTRIIAEMTAKMIGEEG-KTALLYGNKGNLVSDLRQKGYYAGMEKYPNITVV-EQP 218 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 +WD + A +++ NP++KAI+C +D + + QAV AGK G+++V DG +A Sbjct: 219 TNWDPPTGMKAAQDLIAANPDLKAIHCISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDA 278 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 K VE+GQ T+TV G +++ + Sbjct: 279 LKAVESGQFTSTVLTGAKKTGYWNIQVALQLASG 312 >UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRB9_9FIRM Length = 333 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 124/331 (37%), Gaps = 23/331 (6%) Query: 1 MNKYL-KYFSGTLVGLMLSTSA----FAAAE------YAVVLKTLSNPFWVDMKKGIEDE 49 M K + S LV ++ A A+ ++ + P+ K E Sbjct: 1 MKKRMSVVLSMALVMGIMGQCAIAVNAASKTDDDTLNITLINQGSGQPYIAAYKNCFEKA 60 Query: 50 AKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIY 109 K L + V++ D Q ++ + GI +P+ + V A GI Sbjct: 61 EKDLNIKVNLV--DGGWDANQQANAIQNAISSGADGIVISPVDPSAVCTYVDEALDAGIE 118 Query: 110 LVNLDEKIDMDNLKKAGGNVEA-FVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGN 168 + L +I + + V VG + L G++AIIEG G Sbjct: 119 VCALTTQIGTGDAEDPVYPETVGLVGHIETEVGRTAMDIAAEAL-DRSGKIAIIEGTPGM 177 Query: 169 ASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMA 228 + E R+ G E K+ I++V+ +W KA N++Q NP ++ + C +D MA Sbjct: 178 SDTEGRKKGIDEENKEYPDIEVVSRVCGEWVVDKAYTAMQNIIQSNPEVELVICHSDNMA 237 Query: 229 MGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 +G A+A+ +A T KV +VG G +A +++ G++ T+ P T L+ + Sbjct: 238 VGAAKALEDADMTDKVKIVGIGGSKDALDLIKKGEIYGTIMYVPETEAYTALEATAKVVR 297 Query: 289 SGKVIPLDKAPEFK--------LVDSILVTQ 311 + + V + Sbjct: 298 GEAEKETFYNVQDLPLFAETGDVCTQENVDK 328 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 138/296 (46%), Gaps = 19/296 (6%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 S V TL + F++D+ +GI+++AK LGV V + D Q ED Sbjct: 35 GGSDKKDLTIGVSTITLQHQFFIDIDEGIKEKAKELGVKVIVNDPD--QDVAKQTSAIED 92 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 +N G+ + +V V A++K + +V +D ++ + N+ ++V T + Sbjct: 93 FIQQNVDGMIVLGTDNSAIVPAVEGAFEK-MPVVTVDAVLNTE-------NITSYVGTVS 144 Query: 138 VAVGAKGASF----IIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 G K + I +KLG + E+AI+ + R +G +A K ++ +K++ S Sbjct: 145 YDAGKKLGEYTKKYIDEKLGGKS-EIAIVT-DLKSQIQMQRIDGFKDALKGSANVKILNS 202 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 QP +DR ++L+ N++Q NP++ IY + +G A+ +A K V +VG D Sbjct: 203 QPG-YDREESLNTVENLIQSNPDVDIIYATAENSVLGAKAALESA-KNKDVKIVGFDLTE 260 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 EA + G + A + Q P ++G ++ +V A K KV P L D + Sbjct: 261 EASSGITDGTILAMIQQQPKEMGRLAVEAVVKAIKGEKVEKNIPVPA-LLYDKENI 315 >UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSM5_DYAFD Length = 904 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 117/312 (37%), Gaps = 15/312 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M L + + A T + + M G++ E + + Sbjct: 1 MRLALIALLLLTLFAGCAGKQEDAYVIGFSQCTGDDEWRRAMLDGMQRELAFHN-NTKLI 59 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 + + Q++ E+L + +P S L + +A+K+G+ +V +D + Sbjct: 60 FRDAHANSAVQVKQIEELLRNGIHLLIVSPNESDPLTPVIEKAYKQGVPVVVVDRRTSSP 119 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 A+V DN VG + LG G ++ I G ++ R G + Sbjct: 120 -------YYTAYVGGDNYQVGKTVGEYAAALLGGNG-KMIEITGLPRSSPASDRHRGLVD 171 Query: 181 AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 A I+ VA+ W + A VL R P++ I+ N+ MAMG + + Sbjct: 172 ALATRPSIRRVATLNGQWQKDIAKSELRKVLPRFPDLDLIFAQNEVMAMGAREVCNDIFP 231 Query: 241 TGKVLVVGTDGIPEA---RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 K+ V+G DG+P +MV G +TAT G ++ ++ + + + Sbjct: 232 DRKIRVIGVDGLPGQFGDIQMVYDGHITATALYPTG--GEEAARVAMNILQ-KQPYQKEN 288 Query: 298 APEFKLVDSILV 309 + ++DS V Sbjct: 289 LLQTAIIDSSNV 300 >UniRef50_A7II12 Periplasmic binding protein/LacI transcriptional regulator n=42 Tax=Bacteria RepID=A7II12_XANP2 Length = 347 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 86/327 (26%), Positives = 136/327 (41%), Gaps = 25/327 (7%) Query: 3 KYLKYFSGTLVGLMLSTSAFAAAE------YAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 + L S GL ++ A AA + +V+KT +NPF+V MK+G E A LG+ Sbjct: 6 RLLMAASVAWAGLAATSPAGAAEKPADKPIVGIVIKTSTNPFFVKMKEGAEAAAARLGLE 65 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 + FA +GD +Q+ E L KGI P S +V + +A KGI ++ LD Sbjct: 66 LRSFAGKMDGDTDAQVTAVESLIAAGAKGILITPSDSRAIVPVLEQARAKGILVIALDTP 125 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA--EGGEVAIIEGKAGNASGE-A 173 +D G +A TDNV G + LGA + +VA+++ S + Sbjct: 126 LDPP------GAADATFATDNVLAGKLVGEWAAKTLGANAKSAKVALLDLNVNQISVDVD 179 Query: 174 RRNGATE----------AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCA 223 R G + ++V + N+LQR+P + +Y Sbjct: 180 RDQGFLKGFGVNVADPAVIGDEKDSRIVGHDVTLGNEEGGRRAMENLLQRDPYVSVVYAI 239 Query: 224 NDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLM 283 N+ A G +A+ + G+ VLVV DG + V+ G + AT Q P + G++ + Sbjct: 240 NEPAAAGAYEALRSIGRDKDVLVVAVDGGCPGVRNVKDGVIAATAMQFPLAMAQMGVEAV 299 Query: 284 VDAEKSGKVIPLDKAPEFKLVDSILVT 310 + G +F LVT Sbjct: 300 LKYATDGTKPKPADGQDFVNTGVELVT 326 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 38/339 (11%) Query: 1 MNKYL-KYFSGTLVGLMLSTSAF------------AAAE-----------------YAVV 30 M K + + L G +L+ A V Sbjct: 1 MKKKISLILAIVLAGSLLAGCGSSRTENEGTQEDTAKETENTDSKENTVSEGDSFLIGVA 60 Query: 31 LKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP 90 P++ + +G+ D + L V +D+ ++ D +Q+ + + I P Sbjct: 61 SPNNKVPYFSKLVEGMTDLQEELNVELDVQ--DAQDDTNTQINQIQTFIAEGCDLIIMMP 118 Query: 91 LSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID 150 + +L+ + I ++ +D K+ + K G ++ V D+V G K ++ Sbjct: 119 VQLESLIPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGE-LVH 177 Query: 151 KLGAEGGEVAIIEGKAGNASGEARRNGATEAF-KKASQIKLVASQPADWDRIKALDVATN 209 +L + G +A+I+G G +S R+ G E + A I++VA+Q +D D+ +A+ V N Sbjct: 178 QLLGDEGSIALIQGTLGASSQVLRQQGLEEYLSENAPGIEIVAAQNSDQDQSQAITVTQN 237 Query: 210 VLQRN--PNIKAIYCANDTMAMGVAQAVANAGKTGKV-LVVGTDGIPEARKMVEAGQMTA 266 L R I AI + A+G A+ +A + + V+G D E ++A M Sbjct: 238 FLTRFAKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAKDMYG 297 Query: 267 TVAQNPADIGATGLKLMVDAE-KSGKVIPLDKAPEFKLV 304 + Q P D+GA L++ + + I + E +V Sbjct: 298 STLQAPYDMGALTLQVAYQCLTEGSEEIEANTYTEIPVV 336 >UniRef50_A6DJR9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJR9_9BACT Length = 326 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 125/316 (39%), Gaps = 28/316 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSA------------FAAAEYAVVLKTLSNPFWVDMKKGIED 48 M K L + S+ + + TL+NPF+V++ + + Sbjct: 1 MKKLLNALMLLACLGLFSSCGESDSASSNEPLQKNKKLLGITVMTLANPFFVELAEAAKA 60 Query: 49 EAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGI 108 EA+ G V I + D + Q + +D ++ I AP +++ + P+ A I Sbjct: 61 EAEKHGYEVIILSGD---DAEKQAKQMKDFISQKVDAIIVAPKNTLAIGEPIKAANAAEI 117 Query: 109 YLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGN 168 + D G V V TDN G A +ID L GG+V I++ K Sbjct: 118 PVFTADTG-----CTDPGAKVVCNVMTDNFGGGKLAAQAMIDVL-PNGGKVLILDFKK-A 170 Query: 169 ASGEARRNGATEAFKKA------SQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYC 222 S R +G E + +I +VA + + L P++K ++ Sbjct: 171 QSCLLRVDGFKEVIAEHNEAHPDKKIVIVAELDGAAAEEPSKKATEDQLNATPDLKGVFA 230 Query: 223 ANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKL 282 ND A+G A+ A K V ++G DG+ ++ + G++ A Q P++IG ++ Sbjct: 231 INDLSALGAVVALKKANKLQDVKIIGFDGLRIGKEAILRGEIHADPIQFPSEIGKLTVQQ 290 Query: 283 MVDAEKSGKVIPLDKA 298 ++ + +V P Sbjct: 291 ILAYKNGDEVKPEILI 306 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 11/251 (4%) Query: 27 YAVVLK-TLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + SNPF I ++AK+LGV + + D +Q ED+ + K Sbjct: 84 VGFSQSESTSNPFRSTETDSITNQAKSLGVKL--IQRNANADVNAQNSQIEDMIAQGAKV 141 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + AP +S L +A A K I ++ +D + A + AF+ ++ A Sbjct: 142 LIVAPENSDGLGPALAEAKAKKIPVLTIDRTV----TGTACSDFIAFIGSNFYGQAQIAA 197 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK-KASQIKLVASQPADWDRIKAL 204 + G++ +VAI+ G GN R NG + K K + +VASQ +D+ Sbjct: 198 DDLATATGSQ-AKVAILSGTPGNNVTTDRTNGFQDQVKAKYPNMTVVASQTGKFDQTDGQ 256 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAG 262 V +LQ NP I A+Y ND MA+G QA+ AGK + +V DG +A + V AG Sbjct: 257 SVMAQMLQANPGITAVYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAG 316 Query: 263 QMTATVAQNPA 273 + A V NP Sbjct: 317 TIYADVETNPR 327 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 123/311 (39%), Gaps = 14/311 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K + + + + L+ PF V M++ AK LGV++ + Sbjct: 1 MKKITILAAAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQVL 60 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 S+G Q+ E+ + +G +P + V + +V LD + D Sbjct: 61 --DSQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVKTD 118 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 +N G F+ + G ++ ++ G+ G++S R G + Sbjct: 119 -------KKVPHFGANNYKGGQAIGDFVKARF-PNGADIVLLTGQPGSSSNIERTQGIRD 170 Query: 181 AFKKAS-QIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQAVANA 238 + K + +LVA Q +W R + + + +VL P + I AND MA+G +A+ + Sbjct: 171 SLKAGGSKYRLVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQ 230 Query: 239 G-KTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G K G+V+V G D +PEA V G + AT Q P + + + ++ I Sbjct: 231 GLKPGEVMVTGFDAVPEALARVRDGWLAATADQRPGYAVTQAMTQLTNNIRTKSAITGAD 290 Query: 298 APEFKLVDSIL 308 P ++ Sbjct: 291 YPP-TMITKDN 300 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 136/301 (45%), Gaps = 14/301 (4%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 + A AE V LS PF+V M++ +EDEA LGV V + ++ + Q+ Sbjct: 28 MTGCARGGAEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVL--DAQNNSSKQISD 85 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + + + K + AP S L ++G+ ++++D I G V Sbjct: 86 LQAAAVQGAKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNI------AGGKTAVPHVG 139 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVAS 193 DNVA G A +++ G V +I G++S R G + K+V Sbjct: 140 ADNVAGGRAMADWVVKTY-PAGARVVVITNDPGSSSSIERVKGVHDGLAAGGPAFKIVTE 198 Query: 194 QPADWDRIKALDVATNVLQRNPNI--KAIYCANDTMAMGVAQAVANAGK-TGKVLVVGTD 250 Q A+ R +AL V N+L + I C ND MAMG +AV AG + KV V+G D Sbjct: 199 QTANSKRDQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFD 258 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 IPEA ++AG+M ATV QNP T L+ VD KSG + L+ S +T Sbjct: 259 AIPEALARIKAGEMVATVEQNPGLQIRTALRQAVDKIKSGAALKSVSLKP-VLITSGNLT 317 Query: 311 Q 311 + Sbjct: 318 E 318 >UniRef50_C6LH93 Putative ribose ABC transporter n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH93_9FIRM Length = 362 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 124/310 (40%), Gaps = 21/310 (6%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 A+++K +NPF + G A+ +G + + + + Q++ Sbjct: 48 AATTDVKVNGDYTIAMIVKNNTNPFMNGVLNGFSKAAEDIGFEAMLLSPQTADSNEDQVR 107 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 L ED+ I P+ S +V + +AW GI ++ + + D + + Sbjct: 108 LVEDMIQSGVDAICIHPVDSNGIVPALEKAWDAGIPVLVQGTQANTD-------KIYGWY 160 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVAS 193 T A ++ +KL +G V I G + N F+K + L+ Sbjct: 161 GTKYADEATLIAEYLAEKLDYKG-NVVYITGPQQAQNAIDEINATHAVFEKYPDLNLIEE 219 Query: 194 QPADWDRIKALDVATNVLQRN--PNIKAIYCANDTMAMGVAQAVANAG-----KTGKVLV 246 QP +++R ++ V N++Q+ +I + ND AMG A+ NAG + G + V Sbjct: 220 QPGNFNRATSMSVMENLIQKYSEDDIDWVIGGNDECAMGAIAAMENAGWKLGFEDGGIGV 279 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE------ 300 G D +A ++ G +T +V +P +G G +V+ G + P A Sbjct: 280 SGIDCNKDASYAMQEGTLTVSVNPDPVSLGYIGAAFLVNYLNDGDLFPEYVAWPDFQTAD 339 Query: 301 FKLVDSILVT 310 ++D+ + Sbjct: 340 DVVIDASNID 349 >UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TB6_SOLUE Length = 323 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 119/320 (37%), Gaps = 22/320 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAE----YAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 56 M + L +G ++L+ + A + P+ +E Sbjct: 1 MKRRLWMTTGLASAVLLAGCGGEVKKKQFVVAFSQANNAEPYRAAQNALMEKLFAAQ-PD 59 Query: 57 VDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 116 V + S ++ D Q+ E + + AP L + +A + I ++ L+ Sbjct: 60 VKLVISDAQQDNSKQVAQVETFIRQKPDLLIVAPNERAALTAVMGQAMEAKIPVICLERD 119 Query: 117 IDMDNLKKAGGNVEAFVTTDNVAVGAKGASFII----DKLGAEGGEVAIIEGKAGNASGE 172 I N +++ +DNVA+G FI+ K G G V + G G Sbjct: 120 ILQP-------NYTSYIHSDNVAIGRLAGQFIVGHLTKKYGKPAGNVVAMRGLLGVEGEI 172 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R GA E K +IK+VA ADW + KA D T VL+ P I +Y ND MA+G Sbjct: 173 NRDRGAKEILDKYPEIKIVADPVADWIQAKAKDRMTEVLRAQPKIDVVYGHNDPMAIGAY 232 Query: 233 QAVANAGKTGKVLVVGTD---GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G+ +++ VG D G K V G + AT +++ + Sbjct: 233 LGAKELGREKEMIFVGVDGLGGPAGGIKKVMDGVLAATFVYP--LWVDKAVEIGTRILRE 290 Query: 290 -GKVIPLDKAPEFKLVDSIL 308 G V D E +V + Sbjct: 291 PGFVPAKDYVLESVMVTTEN 310 >UniRef50_D1QRT0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella oris F0302 RepID=D1QRT0_9BACT Length = 522 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 114/317 (35%), Gaps = 29/317 (9%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF---AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSV 57 MNK + + LM+ + V + + + + ++ A + V Sbjct: 1 MNKISSFILTFMGCLMICSCNSRNSKQYVIGVSQCSEDI-WRDKLNQELQ-TATYMEDGV 58 Query: 58 DIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI 117 + + ++ + + Q+Q E + +P + + V +A +KGI ++ D K Sbjct: 59 TMRFASADDNDKRQIQQIEQFIKDGVDLLIISPNQAHAITPVVDKAVEKGIPVILFDRKA 118 Query: 118 DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG 177 D G AF+ DNV VG + ++ +L G V + G G++ R G Sbjct: 119 D--------GKYTAFIGADNVEVGRQMGDYVARQLDYHG-NVIELMGLKGSSPAIERHRG 169 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP-----NIKAIYCANDTMAMGVA 232 E + IKLV S DW + QR+ I ++ ND MAMG Sbjct: 170 FIERISRYPGIKLVESLQGDWTKASGRRAIQAFSQRHGTASCATIACVFAQNDRMAMGA- 228 Query: 233 QAVANAGKTGK-VLVVGTDGIP---EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 AG K L G D +P K+V ++A+ G +KL ++ Sbjct: 229 ---REAGLLPKSTLFCGVDALPGEQGGMKLVADSVLSASYIYPTR--GDLVMKLAMNILN 283 Query: 289 SGKVIPLDKAPEFKLVD 305 + + Sbjct: 284 HRPYQKENLLQSALVTP 300 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 11/292 (3%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 ++ + + L F+ +K+ +E E K GV + ++G+ +Q+ ED Sbjct: 22 GSTWAKELTIGLAVANLQADFFNQIKQSVEAEGKARGVKIITV--DAQGNSSTQVSQIED 79 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 L + + + P + +PV A GI ++ +D + F+ +D+ Sbjct: 80 LITRQIDALIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPG-------DTFIASDS 132 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 VA A ++ +G +AI++G+ G R G E K +K+VA QPA+ Sbjct: 133 VAGAKALAEYVGKVTDGKG-RIAILQGQLGTTPENDRAKGFQEGLKGFPGLKVVAEQPAE 191 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W + K VA ++LQR+PNI + D MA+G AQAV A + V+VVG DG K Sbjct: 192 WAQDKGFAVAQDLLQRDPNITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLK 251 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 V +G + AT+ Q +G + +D K+GK +P ++ E L V Sbjct: 252 AVASGVLQATMTQQTQKMGRMAVASALD-LKAGKAVPKEQLLETVLTTKDNV 302 >UniRef50_A5Z738 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z738_9FIRM Length = 369 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 18/297 (6%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIE---DEAKTLGVSVDIF--ASPSEGDFQSQLQLF 75 + + K+ SN FW + K G E K GV V I + E D Q + Sbjct: 69 VKGGLKMGAIAKSFSNEFWRNFKNGYEQSEKVLKDAGVDVSIKIDGTTDESDEIGQQTMT 128 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 ++L N+ Y + +P+S NL V A K I +N+++ + + FV Sbjct: 129 DNLVNQGYNALMLSPISDSNLTASVDNAKGKKIPTINVNDGLIASA--------DYFVGP 180 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQ 194 D G A ++ +LG +G VAI+ G A + R G K S + +VA Q Sbjct: 181 DAYQNGELAAEWVSKQLGDKGD-VAIVIGMAKAFAARERTAGFKGWIKDNNSGLNVVAEQ 239 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 ADWDR KA ++A+ +Q+NP++KAI+C ND MA+GV +AV A K +LVVG DGI E Sbjct: 240 NADWDRQKAKELASTWIQQNPDLKAIFCNNDDMALGVVEAVEEAKK--DILVVGVDGIGE 297 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A + AG++ ATV + ++ + + P L+D V + Sbjct: 298 AYDSIRAGKLDATVDSFGYYMSQVATEVTLRVLAGQDI-PRVTHTPQALIDKTNVDK 353 >UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTB0_9CLOT Length = 358 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 11/289 (3%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 + + + V ++ EA++ G S +E D Q+ EDL ++ Sbjct: 72 KVGFSELAIDGAWRVAQVDSMQKEAESRGYE--FVMSNAELDTAKQISDVEDLLTQDLDF 129 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + AP+ ++ + A KG+ + LD + + G + + ++ + G A Sbjct: 130 LFIAPIDMEAIMPAIEAAKAKGVPTILLDREAN----GTPGVDYICTILSNYIWQGEACA 185 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 ++ + GA+ ++ I GK G + R+ G KK +++VA+Q +W R +A Sbjct: 186 DWLSENGGADSYKIVQITGKVGGSDVRDRQAGFETGVKKYENMEIVATQSGEWSRTEAQK 245 Query: 206 VATNVLQR-NPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVEAG 262 V N++Q + +YC ND MA+GV A+ AG V V+ DG EA + + AG Sbjct: 246 VMQNIIQSTGGDFNVVYCHNDEMALGVVLALKAAGMNPGTDVKVIAIDGQAEAVEAIIAG 305 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +M NP G M K+ + E+ ++DS + Sbjct: 306 EMNCIATCNPR-FGPVAFDTMEKYLNEEKLEHIINNEEY-IIDSTNAEE 352 >UniRef50_A1R356 Putative ribose ABC transporter n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R356_ARTAT Length = 314 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 139/297 (46%), Gaps = 13/297 (4%) Query: 16 MLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 + V + + F+V G++ A G + + + G+ Q+ Sbjct: 19 AANAGGTGKKTIGVSMPEFHSLFYVAAVDGMKKAAADEGYELVVL--NANGNSSQQVNQV 76 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 ++L + + FA + VA A I ++ +D ++ G+V F+ + Sbjct: 77 QNLVTQQVGAVIFAMQDATAGAAGVAEAKGANIPVIAID--------QRPQGDVTTFIGS 128 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 D+V + ++ ++G +G +AII+G G+++ R G +K IK+V++ Sbjct: 129 DSVKASTELCDYLAKQMGGKG-NLAIIKGVLGSSTEIERSKGCGSILEKNPDIKVVSTTN 187 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 ADWD KA +VA +VL NP ++AI+ ND MA+G A+A A AG++ + +V DG P+ Sbjct: 188 ADWDENKAYNVAQDVLTANPELQAIFAQNDGMALGAAKAAAQAGRSN-LKIVSVDGFPQV 246 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK-VIPLDKAPEFKLVDSILVTQ 311 +E+GQ+ AT++Q P +G ++ + A I ++ LV + + Sbjct: 247 YDAIESGQVLATMSQEPYQMGELAVRTAIKAMSGEAGSIQKEQLQPTVLVTKENLEE 303 >UniRef50_C6JCU3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JCU3_9FIRM Length = 325 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 123/321 (38%), Gaps = 23/321 (7%) Query: 1 MNKYLKYFSGTLVGLMLS-----------TSAFAAAEYAVVLK--TLSNPFWVDMKKGIE 47 M + K + + + + + K +N FW + G + Sbjct: 1 MKSHKKEIITVAILMAAAVVIFAGILKPEATQTKKCSLIYIPKIRDNTNDFWTSVISGCK 60 Query: 48 DEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKG 107 A+ ++I A E + + Q +L + + I F+P S + + A +KG Sbjct: 61 MAAEEYESDLEILAPDKEENIEEQNKLLKKAIEQKPDAILFSPSSMDSSDELLKEAKEKG 120 Query: 108 IYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAG 167 I + +D + V TDNV G + KL + ++AI+ G Sbjct: 121 IRITYIDSYTKEKLQ-------DLTVATDNVNAGRMLGEY-ARKLIDKDSKIAIVSHVKG 172 Query: 168 NASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTM 227 ++ R G E + +V + K+ ++A ++++ P+++ I N+ Sbjct: 173 VSTAVEREQGFREGLGDYAD-NIVDIVYCNSLYEKSYELAQELMRKYPDLELIAGMNEYS 231 Query: 228 AMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAE 287 A+GV +AV++AG K+ VVG D EA ++E G + Q +G G++ + Sbjct: 232 AVGVGRAVSDAGAKDKIAVVGVDCSQEAINLMEMGVYKGIIVQKAFRMGYIGVEETIHML 291 Query: 288 KSGKVIPLDKAPEFKLVDSIL 308 V + +LV Sbjct: 292 NGDAVEK-NIDSGCELVTPEN 311 >UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY05_9FIRM Length = 329 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 115/289 (39%), Gaps = 13/289 (4%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 + + T++NP++ + + I+ ++ G ++ S D + Q + E + Sbjct: 44 KSKRTIGALYMTMNNPYFEVINEEIKAVVESKGDVLE--TRDSGMDAKVQAKQVEKFIEE 101 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 I + + + +A K GI ++ +D I + V+ V ++N G Sbjct: 102 KVDCILINAVDWKKIGSSLEKAKKAGIPVIAVDALIYNRSF------VDGTVVSNNYQAG 155 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS-QIKLVASQPADWDR 200 + A ++ + + G++ + ++ N S R G E +KA + + V Sbjct: 156 EQCAKDLMKR--RKKGKILFLV-QSENKSAIDRIKGFKETLEKAGWKYENVGELECQGQL 212 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 + + VL + +I + ND AMG A+ VLV G DG PEA+ M+ Sbjct: 213 ELSQPLVEKVLNKTKDIDVVMALNDPSAMGAMAALDAEHMLSDVLVYGADGSPEAKTMIY 272 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV 309 +M AT AQ+P G ++++ K P L+ + Sbjct: 273 ENKMAATSAQSPRTTGKKTVEMLYKILDGKKTEKQCIVP-VSLITKDNI 320 >UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasmic component) n=2 Tax=Firmicutes RepID=Q97J33_CLOAB Length = 325 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 12/287 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 ++ T +N F+ + I ++ G + + D Q+Q + K Sbjct: 44 KKFGATYMTTNNRFYEIINDEIRSVVESNGD--ILVTRDAALDKNKQMQQIYEFIKLKVK 101 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 I P+ + + A GI ++ +D + D L V V +DN G + Sbjct: 102 AIFINPVDWKQIKPALIAAKNAGIPVIVVDTPVYDDKL------VACTVISDNYDAGVQC 155 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A +++ + +IE SG R G + + Q K+VA+ ++ K + Sbjct: 156 AKYLMKS--KSKANIMLIEHSK-AKSGIDRIKGFVDTIGASKQYKIVAAGDSEGQLDKTM 212 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + ++++++ N+ AI ND A+G A+ G GKV+V G DG PEA+ M+ G M Sbjct: 213 SLVDDLIKKHTNVDAIMALNDPSALGALAALKENGLLGKVMVFGVDGSPEAKTMIHDGFM 272 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 TAT AQ P IG + D K ++ D L+ + + Sbjct: 273 TATSAQFPNKIGHIAAEKAYDILKGKRL-KRDVIVPISLISKENLLK 318 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 24/317 (7%) Query: 2 NKYLKYFSGTLVGLMLST------SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 K L + ++ L + A + + L T NPF++ ++ G + +A LG+ Sbjct: 3 RKSLVLLTAGILTLSGCSGTPRDVPAAGSRAVTLALSTEKNPFFLQVRYGAQAKANELGI 62 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + + + D + Q +D + P S L V++ +KGI + +D Sbjct: 63 DLTVL--DAGDDAEVQAAQLDD-VSSGVA--VVNPADSEALAPAVSQLNEKGIPAITVDR 117 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 I G +V A + ++N GA AS + + A+G EV ++ G G++S R Sbjct: 118 TI-------TGADVAALIDSNNTEGGAAAASVLAKAIRAQG-EVIVLRGIEGSSSSAERY 169 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G T+A + ++++VA++ AD+DR A D+ T++L +P++ I+ ND MA+G A+ Sbjct: 170 EGFTQAMAEHPRVRIVAAEAADFDRDTARDLVTDLLADHPDVAGIFAENDEMALGAVDAL 229 Query: 236 -ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIP 294 AGK V VVG DG E + V+ ++ AT+AQ +++GAT ++ Sbjct: 230 GERAGK--DVKVVGFDGTEEGVRAVKNRKLVATIAQQSSELGATAIEQAGKLLDGE--AA 285 Query: 295 LDKAPEFKLVDSILVTQ 311 +V + + Sbjct: 286 ESVHTPVMVVTRDNIEK 302 >UniRef50_C8XH32 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH32_NAKMY Length = 350 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 128/296 (43%), Gaps = 9/296 (3%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 + T A A + + F++ M+ GIE EA LGV+V+ + D Q + Sbjct: 54 VAAPTKAGKDYNVAFIQGVAGDEFYITMQCGIEAEAAKLGVTVNTQGGQ-KFDPTLQTPI 112 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + + I AP + P+ A GI +V +D + + + V+ Sbjct: 113 LDSVVASKPDAILIAPTDVTAMQRPLENAAAAGIKVVLVDTTTEDPSF------AVSQVS 166 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 +DN GA I DK GG+V +I G ++ +AR G +A K S + Q Sbjct: 167 SDNEGGGAAAFKAIKDK-NPNGGKVLVISTDPGISTVDARVKGFEDAVGKDSTFDYLGVQ 225 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 + D A + T LQ++P+I I+ N A G + V AGK+ ++ +VG D P Sbjct: 226 YSHNDPATAAQLVTAALQKDPDIVGIFATNIFSAEGSSTGVKQAGKSDQMTIVGFDAGPN 285 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 K ++ G + A VAQ PA IG GL + + G + P F ++ + V Sbjct: 286 QVKALKDGTVQALVAQQPATIGTDGLDQAIASLDGGTITPK-IQTGFTIITADNVD 340 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 131/292 (44%), Gaps = 15/292 (5%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 + + + NP+++ ++ I++E G + ++ + D Q +++ ++ Sbjct: 58 QESWKIGFSGIDMENPYFLTLESAIKEEVD--GKNCELIVKDPKTDPDMQASQIQEMIDE 115 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 I +P+ + + + + +VN+D ++ + V+A++ +DN G Sbjct: 116 GINAIILSPVDWEKITPSLEALKEADVKIVNVDTQVKEMDY------VDAYIGSDNYNAG 169 Query: 142 AKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ-IKLVASQPADWDR 200 +I + +GG+VAI+E S R G E KA ++VA + + Sbjct: 170 VLCGEDLIKRC-PDGGKVAILEC-PTQNSVNERITGFEETLAKAENGFEIVAREDTSGEF 227 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 K+L+ A +L N +I AI C ND MA+G A+ A + G++L+ G DG P+ +K ++ Sbjct: 228 QKSLEAAQKILSENSDIVAIMCGNDQMAVGAKTAMNVA-EQGQILIYGVDGSPDIKKELK 286 Query: 261 --AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 Q+ TVAQ+P +G +++ K F +++ V Sbjct: 287 KTENQIAGTVAQSPISMGKDAANTVLNILNGKDYEKEIKENVF-MINQENVD 337 >UniRef50_A3DI69 ABC-type sugar transport system periplasmic component-like protein n=4 Tax=Clostridium RepID=A3DI69_CLOTH Length = 372 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 13/285 (4%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTL---GVSVDI-FASPSEGDFQSQLQLFEDLS 79 + + K + + ++ +K GI+ K L GV+VD + P++ D Q+ E Sbjct: 79 SYKIYCTYKNI-HAWYDAIKCGIDAAVKELAEKGVTVDYEWYGPAQPDAVDQVNSIETAI 137 Query: 80 NKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT-TDNV 138 + + IA + A KGI + + FV TD Sbjct: 138 GQGWDLIAVDVNQPELTGEAINNAVAKGIPVAVFGT------SDVPNCDRAFFVGNTDPY 191 Query: 139 AVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADW 198 G A + +K+G +G ++AI+ G G + E R G + K I++V Q + Sbjct: 192 GDGCALAKAVCEKMGGKG-QIAILAGTIGALAHEERLRGFKDTIAKYPDIEIVDEQRDND 250 Query: 199 DRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKM 258 + KA+ + + LQ PN+ I C N + +G QAVA+AGK+GK+++ G D A Sbjct: 251 EVEKAISITESWLQAYPNLGGILCNNMSNPVGACQAVADAGKSGKIVIGGMDHDLRALNA 310 Query: 259 VEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKL 303 ++ G + QN D+G + + KV + Sbjct: 311 LKDGTLYVAQVQNCYDMGYKLIYNAIKTIDGEKVEESTAVGSTSV 355 >UniRef50_B9K0T2 ABC transporter substrate binding protein (Ribose) n=2 Tax=Agrobacterium RepID=B9K0T2_AGRVS Length = 329 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 14/321 (4%) Query: 1 MNKYLKYFSGTLVGLMLST--------SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 M + S T + L + A++ ++ F++ M KG E A Sbjct: 1 MERRRFLQSATALALSAPAVLAVTRAQAENKKFRIALIPGLTTDAFYITMHKGAEAAAAA 60 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 +G + +P + + +Q+ + + + K I AP + LV P+ +A GI ++ Sbjct: 61 IGAQIIFQGAP-DFNPVTQVPVLDAVIAKKPDAILIAPTDTTQLVQPLKKAADAGIPMIT 119 Query: 113 LDEKIDMDNLKKAGGNVE---AFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNA 169 +D I + + G+ + +++ +DNV G A + +G +G +V + K G + Sbjct: 120 VDTFIGTGDYQTGAGDGDFPLSYIASDNVLGGEIAARSLALAIGDKG-KVYVSNVKPGVS 178 Query: 170 SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAM 229 + + R G K I ++ +Q D D KA V RNP++ ++ AN + Sbjct: 179 TTDQREQGFKSEMAKHPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANLFSGL 238 Query: 230 GVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS 289 G A V AG++G + VV D +++G + +AQ+PA+IG G+ Sbjct: 239 GSANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLIDFAIAQHPAEIGYYGVISAYAHLTG 298 Query: 290 GKVIPLDKAPEFKLVDSILVT 310 + IP F +++ VT Sbjct: 299 -QSIPTKIGTGFTVINKSNVT 318 >UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Proteobacteria RepID=A5G0N2_ACICJ Length = 345 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 10/286 (3%) Query: 23 AAAEYAVVLKTLS-NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 + + NPF K + D AK V + + + + Q+ E++ N+ Sbjct: 54 SKLVVGFSQSESNANPFRAGETKSVRDAAKAFHVR-RLIYTNAHSNQSRQVADVENMINQ 112 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNV-AV 140 + + APL S L A+A K I ++ LD + + +F+ ++ Sbjct: 113 GAQALIIAPLDSTGLQPAFAQAAAKHIPILTLDRRTAGSKC----SDYLSFLGSNFYFKQ 168 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G A + G VA I+G GN+ AR G K +K+V Q +W Sbjct: 169 GEIDARELAKATGGH-AMVAEIQGAYGNSVEVARTKGFAAGLKAYPGMKIVTEQTGNWFT 227 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMV 259 A V + +L +PN+ A+Y DTMA G A+ +AGK G+V +V DG + + + Sbjct: 228 TDAQKVMSQILLAHPNVNAVYAQADTMAFGAITALRDAGKKPGQVKIVSIDGTRQGVQDI 287 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 G + A NP G + + V + Sbjct: 288 VDGWIYADDETNPR-FGPIAFHELQNWFDGKPVPRHIVLTDHIYTP 332 >UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alphaproteobacteria RepID=A6UE72_SINMW Length = 310 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 15/312 (4%) Query: 1 MNKYLKYFSGTLVG-LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 M + T L L SA + + + L F+ +K G+E A+ G+ V + Sbjct: 1 MKLSTLLVAATTASVLALPASAAEVKKIGLAVPNLQADFFNQIKLGVEKHAREKGLEVVV 60 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 ++ D +Q+ +DL ++ + P + +P A + GI ++N+D + Sbjct: 61 V--DAKNDTNTQVSQVQDLMIQDIDAFIYIPAGAAAAAVPTRLAREAGIPVINVDRVPE- 117 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 G + F+ ++V FII+K G G ++AII G+ G R G Sbjct: 118 ------GAPGDTFIAGESVESAYAVCKFIIEKAGGSG-KMAIIHGQKGTTPEVDRFTGCK 170 Query: 180 EAFKKASQIKLVASQPAD-WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 A + ++L+ Q ++ W + +A N+LQ NP+I I+ D +AMG A+AV A Sbjct: 171 RAIDENKGVELIDQQWSNMWSADEGFSIAQNMLQANPDITIIFGQADGLAMGAAKAVDVA 230 Query: 239 GKTGKVLVVGTDGIPEARKMVE--AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLD 296 + KV++ G DG A + + G AT Q+ +G ++ + KV Sbjct: 231 NLSDKVIIGGYDGDVSALEYLARCKGPFIATATQSTQKMGVLAVESALAVAAGEKVEERQ 290 Query: 297 KAPEFKLVDSIL 308 P L Sbjct: 291 -TPNAVLTTCDN 301 >UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI family n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQF4_AGRRK Length = 337 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 133/337 (39%), Gaps = 33/337 (9%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAA-----EYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 M K + T++ L+ + A A + A ++++L+ + V + Sbjct: 3 MTKRALLGATTVLCLLGTALTGAPAYAKTFKIAAIVQSLNTEYNVLWADAAKSHPALADG 62 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + + D +Q LF+ + Y I F P+ P+ RA GI + + Sbjct: 63 TATLTVLDGRQDVLTQSNLFDTAITEKYDAIIFIPVDIDAGNEPIERAKAAGIPVFGSNT 122 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 + L +A++ +++V G A +IDK G + +V ++EG G ++ R Sbjct: 123 VVSKTEL------YDAYINSNDVEAGEMLAKAVIDKAG-KDAKVVVLEGMLGQSAQVQRL 175 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQA 234 G K+ S + ++ A+W R +A+ + N L + + ++ + ND MA+G + Sbjct: 176 EGINNVLKQNSGVTILEQNTANWSRAEAITLMENFLTSHGDQVQGVLAENDEMAVGAIEG 235 Query: 235 VANAGKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 + N G K+ V G DGI +A + V+ G+ T ++ Q+ + + L + Sbjct: 236 IRNHGLDPKKLPVAGVDGIKDALEAVKRGEQTMSILQDASGQSQGAIDLALSKLVGDTYK 295 Query: 294 PLD-------------------KAPEFKLVDSILVTQ 311 P + V S V + Sbjct: 296 PRAKVWDTNGGKLAWNGGKEEHYYVPWLAVTSDNVDK 332 >UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional regulator n=102 Tax=Proteobacteria RepID=A1WJI7_VEREI Length = 358 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 11/285 (3%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 G L+ A + + L F ++ +V + + D +Q Sbjct: 41 TGPALAQQAKKTWKVGAAVYGLKAEFAQLWVNALKKHPLVKDGTVKLTVFDGKYDALTQN 100 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 FE + + Y GI F P+ V++A + I +V + +++ D + ++ Sbjct: 101 NQFETMITQKYDGILFVPIDLQAGADAVSKAAEANIPVVGSNGRVNSD-------KLLSY 153 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 V +++V GA A ++D +G +G V I+EG G + RR G K +K++ Sbjct: 154 VGSNDVIAGAMQAQAVVDAMGGKG-NVVILEGPIGQSGQVERRQGNLSVLAKYPNVKVLE 212 Query: 193 SQPADWDRIKALDVATNVLQRN-PNIKAIYCANDTMAMGVAQAVANAGKTGK-VLVVGTD 250 + A+W R +AL + N L + I I ND MA+G +AV G K + G D Sbjct: 213 MKTANWSRAEALSLTENWLTAHAGKINGIIGQNDEMALGAIEAVKAKGLDPKTIPTAGID 272 Query: 251 GIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 G+ +A + V+AG M A+V Q+ + L +++ P Sbjct: 273 GVSDAVRAVKAGIM-ASVLQDASAQSQGALDVLLRKLIGASYKPR 316 >UniRef50_C3RLD7 Ribose ABC transporter periplasmic ribose-binding protein n=3 Tax=Bacteria RepID=C3RLD7_9MOLU Length = 321 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 121/315 (38%), Gaps = 20/315 (6%) Query: 3 KYLKYFSGTLVGLMLST-------SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV 55 K + + + ++ + + T++NPF+ + I+ + G Sbjct: 12 KMMVFLCLCITLMIFGFYSYPDFKATVGQQRFGATYMTMNNPFFEVINNEIKKAVEANGD 71 Query: 56 SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDE 115 + D Q + DL ++ I P+ + + + + A K I ++ +D Sbjct: 72 VLITL--DPILDVDKQNEQILDLIDQRVDAIFVNPIDAKKIEIGLKAAKKAKIPVIVVDA 129 Query: 116 KIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARR 175 I + V + ++N G A ++ K + ++ ++E A S R Sbjct: 130 PIYDE------SLVNCSIASNNYDAGVLCAKDMMSK--RDHAKIILLEH-ATAKSAVERI 180 Query: 176 NGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAV 235 G + + +++ D A+ +L+ P++ + ND A+G A+ Sbjct: 181 QGFLDTIASNANYQVINRADCDGQIEIAMPTMKQMLKETPDVDVVMALNDRSALGALAAI 240 Query: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 + VLV G DG P+ ++++ G + AT AQ+P +G + ++ K+ Sbjct: 241 ESMEI-DNVLVYGVDGSPDVKELINTGLIQATAAQSPVKMGQLAYQKAKALLENKKIEKK 299 Query: 296 DKAPEFKLVDSILVT 310 + P +L+ ++ Sbjct: 300 IEVP-VELISRDNIS 313 >UniRef50_A9KMR5 Putative solute-binding component of ABC transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR5_CLOPH Length = 334 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 28/330 (8%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF---------AAAEYAVVLKTLSNPFWVDMKKGIEDEAK 51 M K L ++ L+ V++K L N +W ++ G E K Sbjct: 1 MKKLLSMMLALVMVFSLTACGSTNKSKDSSEGEKTIYVIVKVLGNQYWSVVQAGAEKAGK 60 Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 LG V I + +E D + Q++ +D + I APL L P++ +K G +V Sbjct: 61 DLGCKVVIVGTAAESDIEGQVRYIQDAISAKADAIVVAPLDRTALKNPISEQFKSGTPIV 120 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG------GEVAIIEGK 165 +D ++ G + + TDNV G A +I +L A+G G +AI G Sbjct: 121 LIDSSVE-------GEDYSTALMTDNVEAGRMAAKEMIARLKAKGVAEDKEGTIAIQAGS 173 Query: 166 AGNASGEARRNGATEAFKKA--SQIKLV--ASQPADWDRIKALDVATNVLQRNPNIKAIY 221 G+ + R G E + + + K++ + D D KA+ + L N+ ++ Sbjct: 174 TGSMAINDRLKGFNEYWGENAPASWKVLNDDIKINDGDISKAVAFCQDFLTTYTNLIGVF 233 Query: 222 CANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMT-ATVAQNPADIGATGL 280 N+ +G + A +T + ++G D E +M+ G+ A++ Q +G G+ Sbjct: 234 GPNNGSTVGFVTGLTEAKRT-DLTMIGFDFSNEIEQMIRGGEYDVASMVQRQYMMGYDGV 292 Query: 281 KLMVDAEKSGKVIPLDKAPEFKLVDSILVT 310 K ++ GKV +VD+ V Sbjct: 293 KTALELANGGKVENKIVDTGVLVVDNKNVD 322 >UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport protein n=12 Tax=Proteobacteria RepID=A1SYD2_PSYIN Length = 312 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 113/314 (35%), Gaps = 11/314 (3%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLS-NPFWVDMKKGIEDEAKTLGVSVDI 59 M K L + S V + + + ++D +V+ Sbjct: 1 MQKKLAITGLAFSICFSTFSFAKDYVIGVTQNNVGVDSYQTTYDIALKDTMTKY-PNVEG 59 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + G+ Q+ +DL + I P + L V +A + GI ++ + I Sbjct: 60 IVLDAGGNVARQIAQVQDLIQQEVDAIILWPTNGQALTPIVRKAKQMGIPVIITNSNISE 119 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + + AF + + G A + + L +G +V I G+ G + R+ G Sbjct: 120 KGQEF----ITAFSGPNTITQGQYAAELMCEGLNGKG-QVVQITGQPGYQTAINRQKGFE 174 Query: 180 EAF-KKASQIKLVASQPADWDRIKALDVATNVLQRNP-NIKAIYCANDTMAMGVAQAVAN 237 ++ + ++ SQP DW+R K+ V N + R I +Y A+D M +G A+ Sbjct: 175 DSLAADCPGVSIIDSQPGDWNREKSQRVMENFITRFGTKIDGVYAADDNMGIGALNAIKE 234 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 A + +VG ++ G +V Q+P L + + KV + Sbjct: 235 ADLKN-IKIVGATNFAVGYDAIKEGSYYGSVVQSPVSDAIAALAITMKILNGDKVEKDNY 293 Query: 298 APEFKLVDSILVTQ 311 K V + + Sbjct: 294 FDTPK-VTLANIDE 306 >UniRef50_A6M1U1 Periplasmic binding protein/LacI transcriptional regulator n=44 Tax=Bacteria RepID=A6M1U1_CLOB8 Length = 335 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 122/298 (40%), Gaps = 10/298 (3%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 + ++ + + + I+ L + D+ S + ++Q++ Sbjct: 34 AKTSAANSSSKKIIGFAQVGAESGWRTAETDSIKSIPT-LDPNFDLKFSDGQQKQENQIK 92 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 + IA P+ + A I +V +D K+ + + + F+ Sbjct: 93 AIRSFIAQKVDLIALDPVVETGWDTVLKEAKDAKIPVVIVDRKVTVSD----DSLYKCFL 148 Query: 134 TTDNVAVGAKGASFIIDKLGAEGG-EVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 +D VA G K A +ID+ G + +A ++G G+ + R+ G +A K K++ Sbjct: 149 GSDMVAEGKKAAQILIDQFGKDATLNIAELQGTVGSTAMVGRQQGFNDAIKDCPNYKIIK 208 Query: 193 SQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGT 249 SQ D+ R K +V L+ + + I ++ ND MAMG QA+ GK + +V Sbjct: 209 SQTGDFTRAKGKEVMEAFLKSDGDKINVLWSHNDDMAMGAIQAIEEYGKKPGKDIFIVSV 268 Query: 250 DGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI 307 DGI + + + G+ ATV NP +G L++ + +V + E + + Sbjct: 269 DGIKDIFQAMVDGKANATVECNP-LLGPQLLEVAKNILDGKEVERTINSKESQFLQKD 325 >UniRef50_A7B0I6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I6_RUMGN Length = 337 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 12/293 (4%) Query: 18 STSAFAAAEYAVVLKTLS--NPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLF 75 S+ + +V KT+ N FW + +G + A+ G +++ S SE D++ Q +L Sbjct: 38 SSQNKRTYKIIMVPKTIDESNDFWTGLIEGAKLGAEEFGCEIEVVGSDSEDDYEGQNRLI 97 Query: 76 EDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTT 135 E+ KN AP S + V A GI ++ +D ID + V T Sbjct: 98 EESIKKNPDAFLIAPCSYTHTTEAVQEAINAGIKVILVDSVIDKEIANGV-------VAT 150 Query: 136 DNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQP 195 DN G + +F + ++ ++ G+++ R +G E + ++ Sbjct: 151 DNFKAGKELGTF-AKTILKPDSKIGVVAHVKGSSTATEREDGIREGLGEDQN-RIQDIVY 208 Query: 196 ADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEA 255 + A D+ +L+ P I + N+ A+G A+ V G +V VVG D E Sbjct: 209 CNSSYDLASDLTEKMLKERPEIDVVIGTNEYSAVGAARGVKKMGMEDQVKVVGFDNSVEQ 268 Query: 256 RKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 +++EAG V Q P +IG G++ V A + + + KL+ Sbjct: 269 IQLLEAGVFQGIVIQKPFNIGYLGVEQAVKAIEG-YPMEYNLDSGCKLITKEN 320 >UniRef50_C1XTQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Bacteria RepID=C1XTQ0_9DEIN Length = 312 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 10/293 (3%) Query: 14 GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73 L+ A A++ K + ++ ++G ++ A LG I+ P+EG Q++ Sbjct: 1 MLLGMGFAQKQITIAMIPKLVGIDYFNATEQGAKEAAAELGNIRLIYQGPTEGRVDKQIE 60 Query: 74 LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133 L E+ I+ A V + + +A K GI +V D ++ ++ Sbjct: 61 LIENFITAKVDVISVAANDPVAIAPVLEKARKAGIKVVTWDADANVRDVFCNQATFA--- 117 Query: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKK-ASQIKLVA 192 +G + ++G EG EVAI+ + A + K +K+V Sbjct: 118 -----GIGKALVDEMARQVGKEG-EVAIVTSSLTAPNQNAWIAEMKKVLAKDYPGLKVVD 171 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 ++P++ D+ A V ++L+ PN+K ++ + G A+AV AGK GKV VVG Sbjct: 172 TKPSEEDQQLAFRVTQDLLKAYPNLKGVWALSSVAFPGAAEAVQQAGKAGKVAVVGLSTP 231 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVD 305 + + ++AG + + V NP D+G + + G + Sbjct: 232 KQMKPFMKAGVIKSVVLWNPIDLGYLSVYAAKQLVEKGLKEGDKIVTKRGTFT 284 >UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X5_9BURK Length = 318 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 13/312 (4%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFA 61 + L + + L ++A A A + +N W + G + + GV A Sbjct: 4 KRMLGRLTIAMATAGLMSAAMAETTIAYITNGNTNEGWTLINGGAKKAGQKAGVKFIELA 63 Query: 62 SPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDN 121 + +G+ QL + ED+ + IA AP+ S + + +A GI +V +D I Sbjct: 64 AE-KGELSKQLAIVEDMITRKVNAIAIAPVDSAGIAPAINKALAAGIKVVAVDTGIS--- 119 Query: 122 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEA 181 G + ++V TDN+ + +++ +G V + G G ++G+ R+ G + Sbjct: 120 ----GAKITSYVATDNIKAAMVQGDWTAEQIK-DGDTVIYVTGDQGQSTGQERKKGFLDG 174 Query: 182 F-KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 K +K+V WD+ A + L+ NP K I CA D A+G A+ AGK Sbjct: 175 LNAKRKNVKVVEVATT-WDQTMAQNGVETALRANPTAKVIACAWDGGALGAKAALMAAGK 233 Query: 241 T-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAP 299 G V + G DG P M++ G +A AQ A IG G++ + A + KV Sbjct: 234 KAGDVKIAGFDGSPGGLDMMKQGWQSANAAQMLAKIGQVGVETAIAAAEGKKVEARIDTG 293 Query: 300 EFKLVDSILVTQ 311 F ++ S V Q Sbjct: 294 SFLVLPS-NVDQ 304 >UniRef50_C6J068 ABC-type sugar transport system n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J068_9BACL Length = 330 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 13/294 (4%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 S ++ + +P+W ++KG + A+ G+ ++ P + + QL L E Sbjct: 46 PASGEPRYHIVLIEQERYHPYWEMVEKGAAEAAEKYGIDIEF-TGPVRNNMEEQLNLLEK 104 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 I L+ + +A ++GI +V +D +V TDN Sbjct: 105 AIAARVDAIIVQGLNEERFTPVIDKAVRRGIPVVTIDTDA-------PNSQRLTYVGTDN 157 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 +A G + +++ G G II A+ R +G + + +++V + ++ Sbjct: 158 LAAGERLGRLVVETTGGIGKIGVIIGSDQ-AANQLQRLDGLKKIVAEHEGLEIVDVRSSN 216 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 ++A+ A N+L+ +P I + + T A+GV QA N + ++G D E + Sbjct: 217 ISHMEAIQQAANMLRNHPEITIMVGTSATDALGVLQAAKNR---DDLTIIGFDNQKETLE 273 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 + G++ ATVAQ P +G T ++L+ + G+ + E K++++ V + Sbjct: 274 AIRKGEIEATVAQQPFLMGETAVRLLYEHF-GGQALKKAYFTEVKVLNAHNVEE 326 >UniRef50_B2JP41 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderia RepID=B2JP41_BURP8 Length = 322 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 116/314 (36%), Gaps = 19/314 (6%) Query: 1 MNKYLKYFSGTLVGLMLSTSAF-------AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTL 53 M + +G LVG L+ +A + + ++ AK Sbjct: 1 MKVATRLIAGLLVGAALTVAASVNSFAGDKQITLGFSQVGAESAWRTANTVSVKTSAKDA 60 Query: 54 GVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 113 G+++ S ++ ++Q++ + IAF+P+ + A I ++ Sbjct: 61 GINLKF--SDAQQKQENQIKAIRSFIAQKVDVIAFSPVVESGWEPVLTEAKNAKIPVILT 118 Query: 114 DEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGG--EVAIIEGKAGNASG 171 D ID+ + + +D + G + ++ ++ E G +A ++G G+A Sbjct: 119 DRSIDVKDT----SLYVTMIGSDFLEEGRRAGRWLEERYKNEAGPINIAELQGTVGSAPA 174 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPN-IKAIYCANDTMAMG 230 R G E K + K++ASQ D+ V + I +Y ND MA+G Sbjct: 175 NDRHAGLMEVIKNDPKFKIIASQSGDFTLAGGKQVMEAFAKTYGKQINVVYAHNDDMALG 234 Query: 231 VAQAVANAGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 QA+ AG V VV D + + AG++ V +P +G + + D Sbjct: 235 AIQAMEEAGIKPGKDVSVVSFDATKGGFEAMIAGKINVDVECSP-LLGPQLMTAVKDVVA 293 Query: 289 SGKVIPLDKAPEFK 302 ++ E Sbjct: 294 GKQLPKRIVTNETV 307 >UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Proteobacteria RepID=A1WJM2_VEREI Length = 330 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 16/299 (5%) Query: 21 AFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSN 80 A + V +KTLS P++ + + K LG V A+ ++G Q Q+ EDL Sbjct: 32 QTGAFKIGVSMKTLSAPYFAAQMEAAKARGKELGYEV--LATDAQGKLQKQISDVEDLVT 89 Query: 81 KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 + K + P S LV V A G+ +V +D ++ N V + N Sbjct: 90 RGVKLLIINPADSEGLVNAVNNASANGVKVVVIDSTLN------PRANFVTQVQSSNSIN 143 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKA-------SQIKLVAS 193 GA ++I+++G + ++A++ G+ GN G+ RR G +A + + +V Sbjct: 144 GALVGHWVIEEVGNKSLKIALLSGEKGNPVGQERRLGVLSGIIEAQLRKFGKADLTVVGQ 203 Query: 194 QPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP 253 W+ L ++L N +I + ND+M +G +A+ +AG+TG +LV D Sbjct: 204 GWGHWNDEGGLKAMEDLLVANKDINMVLGENDSMVLGARRAIESAGRTGILLVAAADAQK 263 Query: 254 EARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG-KVIPLDKAPEFKLVDSILVTQ 311 EA +++ G+ T +PA + T + L V K K +P + V + Sbjct: 264 EALALIKQGKYGVTGLNDPALVARTAIDLGVKVVKGEVKDVPKQTLTTPAAITKGNVDK 322 >UniRef50_Q89VC4 ABC transporter sugar-binding protein n=3 Tax=Bradyrhizobium RepID=Q89VC4_BRAJA Length = 314 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 129/318 (40%), Gaps = 18/318 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M K L +G V +M + + A + +V K ++NPF+ + G AK LG ++ Sbjct: 5 MRKLL--LAGIAVAMMATPAFAANYRFVIVPKAMNNPFFDFARDGCLKRAKELGNIECVY 62 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 P E + +Q Q+ +D + G+A + + + A GI ++ D Sbjct: 63 KGPVEHEPATQAQIIQDFVTQKVDGLAISVADVAAMTKSIEAATAAGIPVITFDADA--- 119 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 G A++ T+N G ++ + +GG+ A++ G G + R +G E Sbjct: 120 ----PGSKRIAYIGTNNKEFGVALGKQLVK-MRPDGGKYAMVSGGPGAKNLAERVDGVRE 174 Query: 181 AFKKASQIKLVASQP-ADWDRIKALDVATNVLQRNPNIKAI--YCANDTMAMGVAQAVAN 237 A K + ++ S + D A+ T++ P++ AI A +A A+ Sbjct: 175 ALKGSKWTEVAGSPTFCNDDPALAVQQMTDMRTATPDLAAIVPIGGWPMFAPEGFKAFAS 234 Query: 238 AGKT----GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVI 293 K GK +V D + +++ G A V Q P ++G + ++ +K KV Sbjct: 235 RNKKDIDSGKFTLVVADTLKMQLELLRDGYANALVGQRPFEMGEKAMDTLLAIKKGEKV- 293 Query: 294 PLDKAPEFKLVDSILVTQ 311 P LV V Q Sbjct: 294 PEIVYTGLDLVTKDNVAQ 311 >UniRef50_B5XQK7 Sugar-binding domain protein, LacI family n=7 Tax=Proteobacteria RepID=B5XQK7_KLEP3 Length = 317 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 14/313 (4%) Query: 2 NKYLKYFSGTLVGLM--LSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 L + T++ M +S ++ A YA+V F+ M KG +D AK G + I Sbjct: 8 KLRLLAVATTMLASMSFISAASAAGPTYALVQINQQALFFNLMNKGAQDAAKASGKDLVI 67 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 F S + +Q E+ + KGI A + ++ V A I ++ +D + Sbjct: 68 F--NSNDNPVAQNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAIDAVL-- 123 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAE--GGEVAIIEGKAGNASGEARRNG 177 G A V DN+ G + +D + E G I G +A R+ G Sbjct: 124 -----PAGPQAAQVGVDNIEGGRIIGQYFVDYVQKEMGGQARLGIVGALNSAIQNQRQKG 178 Query: 178 ATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVAN 237 E K +I + + KA+ A N++ NP++ AIY + +G AV N Sbjct: 179 FEETLKSNPKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAVEN 238 Query: 238 AGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G+ + V G D +A ++ G +TA + Q+P +GA L +++ SGK +P Sbjct: 239 QGRQKDIKVFGWDLTAKAISGMDGGYVTAVLQQDPEKMGAEALN-ALNSITSGKTVPKTI 297 Query: 298 APEFKLVDSILVT 310 +V V Sbjct: 298 LVPATVVTKANVD 310 >UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Alphaproteobacteria RepID=A9HN30_GLUDA Length = 335 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 15/290 (5%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + P+ + ++ K + + + + +Q+ E+ + Sbjct: 48 KSYVIGFSQANFKEPYRAHVDHELQRLVKNY-PQFKLVIADGQANDNTQVSQVENFLTQQ 106 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 + + + L V+ + KGI ++ LD + G +FV+ DN A+ Sbjct: 107 VDILFVSAFEAAPLTPAVSAVYDKGIPVIELDRRT-------TGEKFTSFVSGDNRAIAH 159 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 + + L +GG+VAI+EG ++ R G ++K++A QP DW + K Sbjct: 160 EAGLYAASLL-PDGGDVAILEGLPSSSPAIERLEGFKAGISTNPKVKIIAVQPVDWMQDK 218 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIP---EARKMV 259 A++V + +LQ +P+IK +Y +ND A G AV AGK G+V ++GTDG+P + V Sbjct: 219 AVEVFSAMLQAHPDIKLVYTSNDLAAAGAYIAVKQAGKLGQVKIIGTDGLPGPSGGIRAV 278 Query: 260 EAGQMTATVAQNPADIGATGLKLMVDAE-KSGKVIPLDKAPEFKLVDSIL 308 GQ TAT A L L +P + +D+ Sbjct: 279 AEGQWTATYVYPTG--AAEALDLAKKILIDCASSVPRLVTVPTQRIDASN 326 >UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDP6_9FIRM Length = 309 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 117/286 (40%), Gaps = 12/286 (4%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 ++ T++NP++V+M + IE+ + G + D + Q + +D+ N+ Sbjct: 26 KQLKFGATYMTMNNPYFVNMDENIEESVQAKGD--ILITRDPLQDQKKQNEQIKDMINEG 83 Query: 83 YKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGA 142 + P+ + + KK I + +D ++ V + + +DN G Sbjct: 84 IDVLFLQPVDRNKVRPALELCKKKHIPVFVIDSEVSDTEA------VVSTIVSDNYDAGV 137 Query: 143 KGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 + A ++ K + I+ + S R G + K Q K+V + + + Sbjct: 138 QCAKDMMKK--KTSANIIIVN-QKALNSINERVKGFRDTIKGHPQYKIVEEKESAAEFEI 194 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262 A+ V ++ N + ND +A+G A+ KT +V+V G DG P+ + M++AG Sbjct: 195 AMKVMEKIIYEKKNYDVVMGGNDPIALGCIAAMQMTDKTDQVMVYGVDGSPDGKAMIKAG 254 Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 + T AQ+P IG ++ V P +L+ + Sbjct: 255 FLEGTAAQSPIKIGEKAVQTAYSYLAGETVKKHVTIP-VELITADN 299 >UniRef50_B1ZN56 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZN56_OPITP Length = 310 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 124/313 (39%), Gaps = 18/313 (5%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 M + L + L+ +S A + + + I+ EA+ G+ + Sbjct: 1 MKRSLLVAAFALLACTVS---QAKLTVGFAQTGSESVWRAANSESIKSEAEKQGIDLRFV 57 Query: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 ++ + +Q++ I APL + A GI ++ +D KI D Sbjct: 58 --DAQSNVDNQMKALRSFIADQVDAIVLAPLVVSGWEAVLQDAKAAGIPVIIMDRKIVAD 115 Query: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 F+ +D G A +I+ + ++ ++G+ G+++ R+ Sbjct: 116 -----PSLYATFIGSDFFKEGQMAAEWILAHADQK-RKIVELQGEPGSSAANERQRAFAS 169 Query: 181 AFKKA--SQIKLVASQPADWDRIKALDVATNVLQRNP-NIKAIYCANDTMAMGVAQAVAN 237 ++VA + A++ R + +L + +I+ ++ ND MA+G +A+ Sbjct: 170 TMATHTSDGFRIVARKVANFRRDQGRQAMAELLTTHGSDIEIVFAHNDDMALGAIEAIEA 229 Query: 238 AGKT--GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 G++ ++VV D I A + V +G++ TV NP G ++ +V G V+ Sbjct: 230 VGRSPGRDIMVVSIDAIKTAVEAVASGKLNCTVECNP-LFGPKVIEAVVRLTSGGTVMKE 288 Query: 296 DKAPEFKLVDSIL 308 + ++D+ Sbjct: 289 TFNKD-IVIDASN 300 >UniRef50_C5EPY5 ABC-type sugar transport system n=2 Tax=Clostridiales RepID=C5EPY5_9FIRM Length = 332 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 110/288 (38%), Gaps = 12/288 (4%) Query: 26 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKG 85 NP+ + G+ I+ P + Q++ L + Sbjct: 43 RVGFSQIETDNPWRTAQINSFREALIPNGMDF-IYHEPERYTVEWQVEDIHRLIREKVDY 101 Query: 86 IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145 + P +L + A + I ++ +D+ + + + ++ D + G A Sbjct: 102 LVIVPADLASLAPVLQDAKEADIPVILIDQSAETIDQ----SYYISLISADYLKEGQICA 157 Query: 146 SFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALD 205 + +K G + I G + +AR G +A ++ ++++ + ++DR+ A Sbjct: 158 DLLAEKFGDTPCRIVEIYGTESSPGAQARSKGFHQALQQYPNMEIIDIEYGNFDRVTAQK 217 Query: 206 VATNVL----QRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTDGIPEARKMVE 260 N L I A++ +D +G QA+ AG G++ +V +GI + K + Sbjct: 218 AMENALIKASTSGQPIDAVFAHSDEDGLGALQAIKVAGLAPGRISIVSINGIQDVCKAII 277 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 AG+ TV NP G L+ E+ K P P ++++ + Sbjct: 278 AGEYLGTVESNPR-WGFIVASLIQQKERGYKPFPTVMIP-YRIITAEN 323 >UniRef50_Q9K692 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K692_BACHD Length = 332 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 133/329 (40%), Gaps = 31/329 (9%) Query: 1 MNKYLKYFSGTLVGLMLSTSA---------------------FAAAEYAVVLKTLSNPFW 39 M ++L + G ++ + ++ ++ + ++ + +N +W Sbjct: 1 MKRHLFFVVGFMICISALATSIYSFVQVTRVETNVPSSTSISLPSSHFVLIAEEENNSYW 60 Query: 40 VDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMP 99 ++KG + V V+ + +P + + QL+L + + GI ++ Sbjct: 61 RLVEKGAREAENQFDVLVE-YKAPKRSNPEEQLKLIDMAISAKVDGIIVQAVNEEMFTPL 119 Query: 100 VARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEV 159 + +A GI ++ +D N A++ TDN G ++D + + V Sbjct: 120 INKAVDAGIPVITIDTDA-------PRSNRVAYIGTDNYYSGTIAGKAMLDDMEGD-IHV 171 Query: 160 AIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKA 219 A+I G ++ + R G + ++ LV + ++ R++A A +++ +P+I A Sbjct: 172 AVITGSLESSHQKLRVQGFIDMISNEPRVTLVEVEASNISRLEAELKAHQLMEEHPHINA 231 Query: 220 IYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATG 279 Y + +G+ A G + V+ D +PE ++E ++ A V Q P ++G Sbjct: 232 FYGTSALDGIGIVAAAEKLGL-DDLYVIAFDTLPENLSLLEQEKIDAIVVQEPFEMGLKS 290 Query: 280 LKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 ++L++D + + + L Sbjct: 291 VELLLDIREGQPYSMTNHTHTSIIRKPDL 319 >UniRef50_B5ZNU3 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Rhizobiales RepID=B5ZNU3_RHILW Length = 329 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 14/308 (4%) Query: 6 KYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSE 65 + + M TS A +++K ++ +W + G K LGV+V + +E Sbjct: 16 LAGAAVIATAMPVTSFAADVTIPIIVKDTTSFYWQIVLAGARKAGKDLGVNVPELGAQAE 75 Query: 66 GDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKA 125 D Q+ + E+ + +P L P+ A K + ++ +D D K Sbjct: 76 SDINGQISILENAVAGKPAAVVISPTEFKALGKPIDEAAKS-VPIIGIDSGADSKAFK-- 132 Query: 126 GGNVEAFVTTDNVAVGAKGASFIIDKL----GAEGGEVAIIEGKAGNASGEARRNGATEA 181 +F+TTDNV G A + + G E GE+ I+ G S E RR G + Sbjct: 133 -----SFLTTDNVQGGRIAADGLAAAIKEMTGKEEGEIVILTNLPGVGSLEQRREGFLDQ 187 Query: 182 FK-KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK 240 K K +K++A + D L++ T+++ NP + ++ +N +A GV QA+A Sbjct: 188 IKTKHPGLKVIADKYGDGQATTGLNMMTDLITANPKLVGVFASNLILAQGVGQAIAENKL 247 Query: 241 TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE 300 K+ V+G D + ++ G + V Q+P +G G+K + K KV + Sbjct: 248 GDKIKVIGFDSDDKTVGFLKDGAIAGLVVQDPYRMGYDGIKTALAVSKGEKVEA-NVDTG 306 Query: 301 FKLVDSIL 308 LV Sbjct: 307 ANLVTKAN 314 >UniRef50_B5XZZ5 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Enterobacteriaceae RepID=B5XZZ5_KLEP3 Length = 311 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 11/298 (3%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 + A +++ +L NP++ KG ++A+ LG + + D + Q +L Sbjct: 16 FSFAAHAAEKGTIMIMVNSLDNPYYASEAKGASEKAQALGYKTTVLS--HGEDVKKQNEL 73 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 + K +GI S V + +A K GI +V ++ +I +D++ +T Sbjct: 74 IDTAIGKKVQGIILDNADSTASVAAIEKAKKAGIPVVLINREIPVDDVALEQ------IT 127 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 +N G++ A+ ++K+ +G + A + + + R + + + VA Q Sbjct: 128 HNNFQAGSEVANVFVEKMAEKG-KYAELTCNLADNNCVTRSKSFHQVIDQYPDMVSVAKQ 186 Query: 195 PADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPE 254 A I + ++LQ +P++K + C N +A+G A+ A ++ V+VVG DG + Sbjct: 187 DAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAANRS-DVIVVGIDGSND 245 Query: 255 ARKMVEAGQMTATVAQNPADIGATGLKLMVDAE-KSGKVIPLDKAPEFKLVDSILVTQ 311 R V+AG + ATV I A G+ + + K K L+ + Sbjct: 246 ERDAVKAGTLQATVMLQAQAIAAQGVTDLDNYLQKGEKPAKQRVMFRGILITQDNADK 303 >UniRef50_C0Z4C9 Putative ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4C9_BREBN Length = 328 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 143/316 (45%), Gaps = 18/316 (5%) Query: 2 NKYLKYFSGTLVGLML--STSAF-------AAAEYAVVLKTLSNPFWVDMKKGIEDEAKT 52 ++ Y LV + L S SA A++++ +W +K G E AK Sbjct: 7 KRFTVYGLVFLVAVTLFYSCSASLTDVVVDKKKTVALIVRMKHGDYWRTVKLGAEMAAKE 66 Query: 53 LGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVN 112 +++ +A E D Q Q++L + + I AP L + ++ I ++ Sbjct: 67 YERNLNFYAPDYEEDAQRQMELVQQAIADGSETIVVAPSDERVLREAIKLTRERAIPILV 126 Query: 113 LDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGE 172 LD + V++++ TDN +G K ++ L + G++ ++ A+ + Sbjct: 127 LDTVGND-------SAVKSYIGTDNYDMGRKAFEKMV-YLIEKKGQIVLLGTDRIKANAK 178 Query: 173 ARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVA 232 R G + + Q++LVA++ A D+ + + +++++P +K + + + A+GVA Sbjct: 179 RREQGVLDLLPREMQVELVANENAPSDKKQIGEWTRELIRKHPQLKGVIALDSSTAIGVA 238 Query: 233 QAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + + ++G KV +V D PE + ++ G ++AT+ Q P +G G+K V+A V Sbjct: 239 EELESSGLRDKVKIVAIDSPPEVLEYLQEGIISATIIQKPLSMGYLGVKYAVEASNGEAV 298 Query: 293 IPLDKAPEFKLVDSIL 308 P K++D Sbjct: 299 -PSLVDTGTKVIDREN 313 >UniRef50_B2IIE3 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Rhizobiales RepID=B2IIE3_BEII9 Length = 314 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 120/314 (38%), Gaps = 12/314 (3%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 +K V L +A V ++ + F +++G++ A +G V + + Sbjct: 1 MKSIFTAAVLAALMAGTASAETIGVSMQNFDDNFQTLLRQGLQARASQVG-GVTLQIEDA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 + D QL + I + A A K GI LV L+ + + N Sbjct: 60 QADIARQLNQVNNFIAARVDAIIITLTDTSAASGITAAAQKAGIPLVYLNLEPENINRLP 119 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEG----GEVAIIEGKAGNASGEARRNGATE 180 +A+V + G GA L +G ++ I+ G + + R + E Sbjct: 120 KN---QAYVGSKETDAGRLGAEAACQLLKKKGKAGQAQIYILMGDLAHQASRDRTSAVKE 176 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + + + + A W R A+DV TN + I AI+ +D MA+G QA+ A Sbjct: 177 TLAAGECKGVTIADERSAAWMRTNAMDVTTNWITTGRPIDAIFANSDEMAIGAIQALKAA 236 Query: 239 GKTG-KVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G + V+VVG + + +E G + TV QN A+ L V + V Sbjct: 237 GVSKNDVIVVGVNAAQDGLVAMEDGDLHVTVFQNAKGQSASALDAAVALARGKSV-DRQV 295 Query: 298 APEFKLVDSILVTQ 311 F+LV + + Sbjct: 296 MVPFELVTPENMAK 309 >UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q2Z4_9ENTR Length = 308 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 115/291 (39%), Gaps = 9/291 (3%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 A + V + + + F ++ + + AK + + +G QL + N Sbjct: 20 AIQVGVSIAQMDDVFLSRLRGYLIEHAKQY-PDMTLQFEDGQGAVDKQLSQVQSFINGKV 78 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 I P+ + A K + L+ L+ + G+ +++ +D + G Sbjct: 79 DVIIVNPVDTQGTKNMSDAARKAKVPLIYLNRMPSDSKM----GDGISYIGSDEIEAGRL 134 Query: 144 GASFIIDKLGA-EGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202 ++ D + + +AI++G N + R GA E K + +V A W R Sbjct: 135 QMGYLADMVKDRKNVNIAIMKGLLSNDATRFRTQGAKEVIAKHPNMHVVMEDTAKWMRED 194 Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT--GKVLVVGTDGIPEARKMVE 260 +++ N + I + D MA+G A A+ + G +LV GTDG P + ++ Sbjct: 195 GMNLMNNWILTGQKIDILSANADEMAIGAAMAIKSNGLNIGKDILVGGTDGGPNGLQAIK 254 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +G +T TV Q+ + + A K + ++ P F+LV + Sbjct: 255 SGLLTVTVFQDAKSQAFGAIDMAEKAAKGETLKDINFIP-FQLVTPQNYQK 304 >UniRef50_B9KBM0 Sugar binding protein of ABC transporter n=2 Tax=Thermotoga RepID=B9KBM0_THENN Length = 327 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 118/312 (37%), Gaps = 15/312 (4%) Query: 1 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKT-LSNPFWVDMKKGIEDEAKTLGVSVDI 59 M + L + L S + +V ++PFW + KG++D + GV + Sbjct: 18 MRRVLIFLMVVLAVFGFS-----KYTFYLVSHGGPADPFWAVVMKGLKDAGEKYGVE-TV 71 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + P + + + L + G+ + V L P+ +A K GI +V ++ + Sbjct: 72 YLGPEKYSLKEFIDLVNSAIARKPDGLIVTITNPVALDEPLRKAIKMGIPVVAIN--VPD 129 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 + +V D G A ++ + + +AI + G+A EAR G Sbjct: 130 TRPPEEAIPYLVYVGMDEYLAGVYAARRMLQEFTPKRAVIAI--HEPGHAGLEARAKGIM 187 Query: 180 EAF-KKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + +K ++ + D KAL + + L ++P+ AI+ A Q V Sbjct: 188 DVLSEKNIPVEKLDITT---DPTKALSIMKSYLMKHPDTDAIFTLGPLGAHPAIQLVEEE 244 Query: 239 GKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 G GKV + D + + ++ G + T+ Q G + + ++ G + Sbjct: 245 GLKGKVKIGAIDLTTKIIEAIKDGTVLFTIDQQQYLQGYLPVVFLYLYKEYGLIPHEKVL 304 Query: 299 PEFKLVDSILVT 310 +VD V Sbjct: 305 TGPSIVDKSNVD 316 >UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KM03_RHISN Length = 312 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 123/313 (39%), Gaps = 14/313 (4%) Query: 5 LKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPS 64 +K + L+ S+ A + V + + ++ F M + ++DEA + + + + Sbjct: 1 MKRMIIGTTAMFLAASSAYAGDIGVTIAS-NDTFLAVMVQAMKDEAAKTNQPLQVEFADA 59 Query: 65 EGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 124 D QL ++ I + S A GI LV ++ + Sbjct: 60 --DVNKQLSQIQNFIAAKVDAIIVNVVESTATPTITKMAADAGIPLVYVNNTPSDLDQLG 117 Query: 125 AGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGE----VAIIEGKAGNASGEARRNGATE 180 AF+ + + G A + L EG + II+G + E R + Sbjct: 118 PK---AAFIGSQEIDAGTLQAKEVCRVLKEEGKTEDAGILIIQGVLAQHAAEQRSKAVHD 174 Query: 181 AFK--KASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANA 238 + + +K++ Q A WD +KA D+ TN + A+ ND MA+G ++ A Sbjct: 175 VVATPECNFMKIIDEQTAQWDPVKAQDLMTNWITAGHKPVAVLSNNDDMALGAVNSLKAA 234 Query: 239 GKT-GKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297 G V+V G D EA V+ G + ATV Q+ GA + + K KV Sbjct: 235 GWEMKDVIVAGIDATKEAMHYVKTGDLDATVFQDAVGQGAGSVDAAIKLAKGEKVESPVW 294 Query: 298 APEFKLVDSILVT 310 P F+LV++ V Sbjct: 295 IP-FELVNAANVD 306 >UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMU2_9FIRM Length = 369 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 9/293 (3%) Query: 23 AAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKN 82 + A+ + ++ N +W +G + A + GVS D+ S D QLQ +D + Sbjct: 50 SDYHLAICIHSMDNEYWAQEAEGAKLAAASYGVSADVLTCDS--DDNKQLQGIKDYIAQY 107 Query: 83 YK--GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 140 P S+ N + G Y+ L + D K + A + D++A+ Sbjct: 108 GDKAVFVVDPSSTANTANIAELCEESGNYVAILAHRADGLYPKDYP-HFVASLMLDDIAI 166 Query: 141 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDR 200 G A + + +G EG +VA ++G G+ S R EA K I++V SQ A W + Sbjct: 167 GKATAKALFESIGGEG-QVAELQGLLGDDSATNRHKAFEEALKDYPNIEVVDSQTASWSQ 225 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 +A+ + N L + P++K +Y ANDTMA+G +A+ N G GK++V G DGI A V Sbjct: 226 SEAMTLTENWLVKYPDLKGVYSANDTMALGAVEALKNKGLNGKIMVSGCDGIEAALNAVN 285 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLV--DSILVTQ 311 G M T A N I G + A K+ P +L+ + LVT+ Sbjct: 286 DGDMVITNANNGYMIAGYGASYAIQAALG-KLDPTTIPDNERLIFCKTTLVTK 337 >UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8H8_ARTCA Length = 322 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 13/300 (4%) Query: 15 LMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 74 S A VV+ L +P M ++ A GV ++I + S+ D S+L Sbjct: 30 ATSSGEAAKTYNIGVVVLDLQDPDLAHMTDAMKKTADEKGVKLNI--TDSKKDVGSELNQ 87 Query: 75 FEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVT 134 EDL + + PL R I L + + + + ++++ Sbjct: 88 VEDLLTRQVDAVIMQPLDGDASQNAAKRVIAANIPLFI----LSTEFAEGSDVGYKSYIG 143 Query: 135 TDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ 194 D+ G A ++ +KL GG + G G + + R+NG + + K+VA Sbjct: 144 VDDTVAGQMQAEYL-NKLMPNGGNLVFAAGVYGASWTDRRKNGFDKTINE--NFKIVAEF 200 Query: 195 PADWDRIKALDVATNVLQRNP--NIKAIYCANDTMAMGVAQAVANAGKTGKVL-VVGTDG 251 A R A + LQR P I A+ ND MA+G A A+A+AG+T + VVG DG Sbjct: 201 QAKGSRDDAKRNMEDTLQRFPSGQIDAVVANNDEMAIGAASAIADAGRTAEFKAVVGVDG 260 Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 A + +E G M+ATV Q+ A G ++++ D G V P F L+ +++ Sbjct: 261 TEPALQDIEGGTMSATVRQDSAGQGVKAVEVVTDFLNGGNVDNRYTLP-FTLITKDNLSE 319 >UniRef50_D2BFJ9 Sugar ABC transporter n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFJ9_STRRD Length = 345 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 13/288 (4%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + V++K + FW M G + G+ V F SE + Q+QL E+ ++ Sbjct: 49 KKIDVIIKASDSSFWQTMIAGAKQSGGDFGLKVSTFGPTSETNIDQQVQLVENSISRGVD 108 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 G+ AP SS L + RA K G+ ++ +D ++ + F+ TDN+ G + Sbjct: 109 GLVIAPNSSSALNSAIERARKAGLKVITVDSRVTTASEG--------FIGTDNLKAGMQA 160 Query: 145 ASFIIDKLGAE---GGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDR 200 + + L A+ G V I AG S R +G + Q+K+ + + D Sbjct: 161 GKRMCELLKAQNKTSGSVMIESSVAGIQSLVDRDSGFKQGLANNCPQVKVTLQRYNNNDI 220 Query: 201 IKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVE 260 A + L N + ++ N+T +G A+A+ + T V VV D P+ + Sbjct: 221 NTAASQVNDALTANRELAGVFADNNTSGVGAARAIQDNNVTDTVPVVAFDSDPQENAALA 280 Query: 261 AGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 AG + A V QNP G G+ L +G++ P D P + D Sbjct: 281 AGTIDALVVQNPYFFGYQGV-LAAGMAAAGRIPPRDIDPGAVVADKRN 327 >UniRef50_C6PMK8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMK8_9CLOT Length = 329 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 116/288 (40%), Gaps = 10/288 (3%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 + ++ SNP+W +K G E AK +D + ++ Sbjct: 39 KPKITLISHVYSNPYWKYIKLGAEKAAKQRNAVIDFQGPDT-ASAGEGIKFINMAYAAKV 97 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 GI + + GI +V +D + A+V TDNV G Sbjct: 98 SGIITYVQDEAMYKPVIDKVLAGGIPIVTVDSDAE-------NSKRLAYVGTDNVTAGRV 150 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 GA +I +G G V II G + R NG TE K S++ + + +D ++A Sbjct: 151 GAKEMIHHVGIYG-NVGIIMGGKNVKNQIERVNGFTEYIKSNSKLNISEIESSDSYLLEA 209 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 +L N +IKA++C + G A+A+ + G KV ++ D +PE ++ G Sbjct: 210 ELATKKILINNKDIKAVFCTSALDGQGAAKALISMGAAEKVKIICFDDLPETLDYIKNGT 269 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311 +T+T+ Q+P +G + +++D + + +V + + Sbjct: 270 ITSTIVQDPYGMGYKAVNIIMDIMEGKDT-KGVFLTDVIVVSKDNIDE 316 >UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Proteobacteria RepID=A5FXE6_ACICJ Length = 328 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 11/293 (3%) Query: 18 STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77 S A+ + +LSNPF+V +K +EA LG + + G+ +QL L + Sbjct: 34 SQKGSNGKTIAIFVPSLSNPFFVAEEKFAAEEATKLGYGTMV--ASHNGNAYTQLNLIKT 91 Query: 78 LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDN 137 ++ I + + + V A K G+ + +D +I+ + K A + ++N Sbjct: 92 AIARHVAAIILDNAGADSSISAVKLATKAGVPVFLIDREINAKGIAK------AQIVSNN 145 Query: 138 VAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD 197 + +G +G + G + + + R G K S +K+VA Q AD Sbjct: 146 FQGAQLEGTEFAKLMGYKG-TYVELTGLPSDTNAKVRSQGVASVLKHFSGMKMVAVQTAD 204 Query: 198 WDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARK 257 W + K V +L+ +P+IK + NDTMAMG A+ A K V+V G DG P+ Sbjct: 205 WSQSKGFQVTQTLLEAHPHIKGLIADNDTMAMGAEAALLAAHKPN-VIVTGFDGSPDVIN 263 Query: 258 MVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV-IPLDKAPEFKLVDSILV 309 + GQ+ A V Q A + ++GK P + L+ V Sbjct: 264 SIRKGQIKADVLQPIATFSREAVIEADKYIRTGKTGKPEKQELNCTLITKANV 316 >UniRef50_B1LAH5 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Thermotoga RepID=B1LAH5_THESQ Length = 343 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 121/320 (37%), Gaps = 38/320 (11%) Query: 22 FAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNK 81 + K+L+NP+W ++ G++D A+ LG+ +P E D Q + K Sbjct: 20 SEDMTILLAPKSLNNPYWFAVENGMKDAAEKLGIKAIF-DAPVEADAAKQAEKILSYIVK 78 Query: 82 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVG 141 GI +P + + V RA KGI ++ D A++ T+N G Sbjct: 79 GVDGIGISPNDPEGIKVVVKRALDKGIPVIMFDSD-------SPDSGRYAYIGTNNYNAG 131 Query: 142 AKGASFIIDKL-----GAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQ------IKL 190 + + + + +AI+ G + R G +A + S+ + + Sbjct: 132 YEAGKLMAQLIEKYRAEKKTIRLAILTGGLAALNLNERIRGFKDALEDYSKRSGKEIVYV 191 Query: 191 VASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMG----VAQAVANAGKTGKVLV 246 P D D KA+ + +V ++ ++ + + V A+ + +LV Sbjct: 192 ADPFPCDDDSAKAIQIIRDVTRKYTDLDGWFMSGGWPLFAPKETVISALGGPERMKDLLV 251 Query: 247 VGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSG---------KVIPLD- 296 VG D + ++V+AG + V Q P D+G + ++ + K G KV+ D Sbjct: 252 VGFDTLLPELELVKAGAVKGLVGQRPYDMGYLSVLVLYNMAKIGVENTLKMLPKVVKEDG 311 Query: 297 -----KAPEFKLVDSILVTQ 311 +V V Q Sbjct: 312 TVDYIIDTGVDIVTEENVDQ 331 >UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AR66_RHILS Length = 333 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 132/323 (40%), Gaps = 25/323 (7%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDI 59 + + S L ++ + AF+A + + ++ M K + A VD+ Sbjct: 5 TRRMLIISAGLATVLTAAPAFSADKIVIGFSQASSNSAHRNTMTKRNQAYAAEHFKDVDL 64 Query: 60 FASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDM 119 + +EG Q+ E L + K + + S + + + GI ++ L+ +D+ Sbjct: 65 IVTNAEGKSAKQISDVESLMVQGMKVLMISAQDSAAIAPTIKQVLAAGIPVITLERSLDI 124 Query: 120 DNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGAT 179 V V N +G +I + L +G V I+G A R G Sbjct: 125 P--------VTLHVGPHNKPIGTLAGKYIAEALKGKG-NVVEIKGDPAVAPAVERHEGFA 175 Query: 180 EAFKKASQIKLVASQPADWDRIKALDVATNVLQRNP--NIKAIYCANDTMAMGVAQAVAN 237 EA ++IK++A ADWD+ KAL + LQR P I+A+Y ND MA G +A+ Sbjct: 176 EAIA-GTEIKVIAETHADWDQEKALKFMEDTLQRFPAGQIQAVYAHNDNMAFGALRAIQA 234 Query: 238 AGKTGK-VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKS------- 289 AG+ + +L++G DG A + V G +TAT + G+ + Sbjct: 235 AGRDKEGILIIGIDGENAAIRAVAKGDLTATFTYSTV--APEGVIAAHALATNDTAALEK 292 Query: 290 -GKVIPLDKAPEFKLVDSILVTQ 311 G + D + S ++T+ Sbjct: 293 LGTLTKKDDGSMEIEIASKMITK 315 >UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFL8_9FIRM Length = 312 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 126/275 (45%), Gaps = 13/275 (4%) Query: 24 AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNY 83 VV K+ S+ +W+ + G+E A LGV V I + +E D ++Q Q+ L K+ Sbjct: 41 KYVIGVVTKSRSSEYWMSVCSGMEKAASDLGVKVIIMSPDTETDEKTQQQMIGSLLKKDI 100 Query: 84 KGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAK 143 +A +P++S N + +A +KGI +V+ D KI ++ DN VG + Sbjct: 101 DALAVSPINSHNAKGYLKKAEEKGIQVVSYDTKILEKG--------VPYIGIDNEKVGRE 152 Query: 144 GASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKA 203 A ++ ++ +G V II G +S +R G + K + IK+ ++ + Sbjct: 153 LAQYMAAQMKKKGL-VGIISGNLKQSSHASRLKGFRDYIDKNTDIKIAFTESGYSNLRMP 211 Query: 204 LDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQ 263 + +++ +P++ I+ + A+G+ + + + VL+ D +A V+ G+ Sbjct: 212 EKEISRLMREHPDLNGIFATSAVTALGIMEYLGDR----PVLIATVDAQEDALDAVKKGK 267 Query: 264 MTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA 298 + A Q +IG ++ +V+ ++ K Sbjct: 268 IGALAYQPGYEIGYETVRYIVNQKEGKKQPEQKII 302 >UniRef50_A8RSF4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RSF4_9CLOT Length = 315 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 121/317 (38%), Gaps = 21/317 (6%) Query: 1 MNKYLKYFSGTLVGLML---------STSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAK 51 M T ++L S A + T +NP++ + +GIE+ + Sbjct: 1 MKIGTGLLILTAGAMLLLGGCGHGDASGRQHEARLFGATYMTRNNPYFDVLNEGIEEVVE 60 Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 G + D + Q + +++ ++ + + P+ + + + G+ ++ Sbjct: 61 ANGD--ILLTRDPLQDQEKQNEQIQEMIDEGIQMLFLNPVDWEKVQPALDACREAGVGII 118 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASG 171 N+D + + V + + TDN G A ++ + + ++ I++ S Sbjct: 119 NVDTVVKDRDS------VISIIETDNYQAGQLCALDMMKR--KDEAKIVILD-NPIQTSI 169 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 R G + ++V + A + + V ++L+R+ + I ND A+G Sbjct: 170 TNREQGFLDTIADNHNYQVVYREAAAGEIEVSSHVMADLLRRDISFDVILGGNDPTALGA 229 Query: 232 AQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK 291 A+ A + VL+ G DG P+ + +++ G +T T AQ+P IG + Sbjct: 230 LAALQQARREEGVLIYGIDGSPDFKAILDVGYVTGTSAQSPRSIGRKAAETAYRYLDGEP 289 Query: 292 VIPLDKAPEFKLVDSIL 308 V P ++ Sbjct: 290 VEKYISMP-STMITRDN 305 >UniRef50_C6PN50 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN50_9CLOT Length = 333 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 72/323 (22%), Positives = 130/323 (40%), Gaps = 26/323 (8%) Query: 3 KYLKYFSGTLVGLMLST-----------SAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAK 51 K + + S +V L+L + S + L P+ + M + I +EAK Sbjct: 8 KIVIFLSLAIVFLILFSLIIIENIRMKNSDSVEYVIGMSQANLYEPWRISMNEEISNEAK 67 Query: 52 TLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLV 111 ++ I + GD Q + ++L N + + S L V++A+K + +V Sbjct: 68 KYK-NIKIVYKDAGGDTNKQKKDIDELLNSGIDLLIVSINDSEKLTPVVSKAYKS-VPVV 125 Query: 112 NLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASG 171 LD ++ G N ++ DN +G + ++D LG G V I+G + Sbjct: 126 VLDRAVE-------GYNYSVYIGPDNEKIGREAGKMVVDLLGNSEGRVIEIQGLLNSHPD 178 Query: 172 EARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGV 231 R G EA K+ IK+V + +W + +A D +L+ + NI I+ ND MA+G Sbjct: 179 IDRSKGFREAIKQCDNIKIVRTVIGEWQKDEAEDKIEELLKEDRNIDIIFAHNDYMALGA 238 Query: 232 AQAVANAGKTGKVLVVGTDGI---PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEK 288 +A G + ++G DG+ +V G + T + G + ++ Sbjct: 239 YKAAYKLGI-NNIKIIGVDGLTGENGGLDLVSRGILQGTFTCSTG--GKEAVDSALNILN 295 Query: 289 SGKVIPLDKAPEFKLVDSILVTQ 311 K IP + + V + Sbjct: 296 KKKKIPKKIVLKSDKITKSNVNE 318 >UniRef50_UPI0001B55A58 periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55A58 Length = 331 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 7/296 (2%) Query: 13 VGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 G + ++ + + A+V + PF++ M+ G ++EAK LG + + +P + D Q Sbjct: 31 SGSGSAANSANSKKLALVPGVQAEPFYISMQCGAQEEAKKLGYELTVQ-APQKFDATMQT 89 Query: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 + L + + AP ++ P+ + +G +V +D + ++ + + Sbjct: 90 SIVNSLGSNPPAALLVAPTDDQAMLAPIQQVKNRGAKIVEVDTSLKDKSVAVSSVS---- 145 Query: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVA 192 +DN G A + +G + G V I++ AG ++ AR G + K +K V Sbjct: 146 --SDNAEGGKLAAQTMAKLVGDKPGSVLILDTIAGTSTTAARAKGFEDELKNHPNLKSVG 203 Query: 193 SQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGI 252 Q + +A T L P++ I+ N G A + NAGK GKV +VG D Sbjct: 204 IQFTQNEPEQAASKVTAALVSTPDLVGIFATNLNTGEGAATGLRNAGKIGKVNLVGFDAS 263 Query: 253 PEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSIL 308 P ++ G+ A +AQ+PA IG G+ V A + A + L Sbjct: 264 PSEVDGLKKGEYQALIAQDPAQIGTKGVDQAVAALEGKPTERDLTAQLHSITKDDL 319 >UniRef50_D1PLY2 Putative periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY2_9FIRM Length = 324 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 120/285 (42%), Gaps = 9/285 (3%) Query: 25 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYK 84 + A+V K+ + FW + G E A + + I +E D+++Q ++ + + Sbjct: 34 YKVALVAKSTNTDFWKAVFVGAEAAATEYNMDLTIDGPETEEDYETQNRMIAEAVENGAQ 93 Query: 85 GIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKG 144 + F+ + + A KG+ +V +D ++ + +V ++ TDN + G Sbjct: 94 ALVFSAIDFDANAPAIEEAADKGVKIVVIDSAVNTE-------DVATYIGTDNYSAGQMA 146 Query: 145 ASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL 204 A + +V I+ +A+G+ R GA + F ++ + ++VA+ + A Sbjct: 147 AEAALQGTEGT-LKVGIVNYDVNSANGQDRERGAVDTFAESGRAEIVATIHTLAEASSAQ 205 Query: 205 DVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM 264 + +LQ +P I A+ N+ ++G AQAV + +V D ++ G + Sbjct: 206 EDTRKMLQDHPEINALLAFNEPTSVGAAQAVEELHLQNALWMVAFDSNLVTIDALQTGVV 265 Query: 265 TATVAQNPADIGATGLKLMVDAEKSGKV-IPLDKAPEFKLVDSIL 308 A V QN ++G G++ + + ++++ Sbjct: 266 DALVIQNTYEMGYFGVQSAYKLLSGQRSEVEKHVDTATRVINREN 310 >UniRef50_B2JDH5 Periplasmic binding protein/LacI transcriptional regulator n=83 Tax=Proteobacteria RepID=B2JDH5_BURP8 Length = 321 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 24/316 (7%) Query: 2 NKYLKYFSGTLVGLMLSTSAFAAA-------EYAVVLKTLSNPFWVDMKKGIEDEAKTLG 54 + +ML T A A + + + L+NP++V M+K + D A ++G Sbjct: 15 RTLRLRATLAFAAVMLGTPLLAPAAADAAPLKIGMTFQELNNPYFVTMQKALNDAAASIG 74 Query: 55 VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 114 +V + + + D Q+ ED+ K + P S + V A K Sbjct: 75 ATVVV--TDAHHDVSKQVSDVEDMLQKKIDILLVNPTDSTGIQSAVTSAKKA-------- 124 Query: 115 EKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEAR 174 + + A G V++FV + N G ++ +G G EVAI++G R Sbjct: 125 GAVVVAVDANANGPVDSFVGSKNFDAGQMSCEYLAKAIGGSG-EVAILDGIP-VVPILER 182 Query: 175 RNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQA 234 G A K +K+V +Q +R AL V N++Q +PN+K I+ ND +MG A Sbjct: 183 VRGCKAALAKFPNVKVVDTQNGKQERATALSVTENMIQAHPNLKGIFSVNDGGSMGALSA 242 Query: 235 VANAGKTGKVLVVGTDGIPEARKMVE--AGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292 + ++GK + + DG PEA ++ + T AQ P D + + + A+K G Sbjct: 243 IESSGK--DIKLTSVDGAPEAITAIQKPNSKFIETSAQFPRDQIRLAIGVAL-AKKWGAN 299 Query: 293 IPLDKAPEFKLVDSIL 308 +P + KLVD Sbjct: 300 VPKTIPVDVKLVDKDN 315 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.176 0.500 Lambda K H 0.267 0.0543 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,043,974,308 Number of Sequences: 3077464 Number of extensions: 105988465 Number of successful extensions: 333640 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3626 Number of HSP's successfully gapped in prelim test: 5973 Number of HSP's that attempted gapping in prelim test: 309157 Number of HSP's gapped (non-prelim): 10679 length of query: 311 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 183 effective length of database: 646,480,964 effective search space: 118306016412 effective search space used: 118306016412 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 94 (40.4 bits)