52 c3clkB_ Probab=100.00  E-value=3.2e-34  Score=204.98  Aligned_columns=258  Identities=18%

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCC
Q ss_conf             97889997899999999999998698799997078889899999999998469977999718852104899986324881
Q batch____        30 VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIY  109 (311)
Q Consensus        30 i~~~~~~~f~~~~~~gi~~~a~~~G~~~~i~~~~~~~d~~~~~~~i~~l~~~~~d~ii~~~~~~~~~~~~~~~~~~~~i~  109 (311)
                      |+|+++||||.++.+|++++++++||++.+...+       +.+.++.++++++||+|+.+  ..........+.+.+++
T Consensus         1 iipdl~~~f~~~i~~gi~~~a~~~g~~l~i~~~~-------~~~~i~~l~~~~vdgiIi~~--~~~~~~~~~~~~~~~~~   71 (262)
T c3clkB_           1 VIAAVVSNFAQQILDGIQEEAHKNGYNLIIVYEE-------QKHALLTAIERPVXGILLLS--IALTDDNLQLLQSSDVP   71 (262)
T ss_dssp             CEEEEECCHHHHHHHHHHHHHTTTTCCEEEECCH-------HHHHHHHHHHSCCSEEEEES--CCCCHHHHHHHHHTTCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-------HHHHHHHHHHCCCCEEEECC--CCCCCHHHHHHHHCCCE
T ss_conf             9887788459999999999999879889999744-------69999999856997999818--86530358999854982


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             57753145534546666676518997757999999999997408895299997798886567999999999997418887
Q batch____       110 LVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIK  189 (311)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~V~~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~g~~~~~~~~~~~~  189 (311)
                      ++..+........         +|+.||+.++..++.++..   .++++++++.+.........|..||++++.+++...
T Consensus        72 v~~~~~~~~~~~~---------~V~~d~~~~~~~~~~~l~~---~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~~~~~  139 (262)
T c3clkB_          72 YCFLSXGFDDDRP---------FISSDDEDIGYQATNLLIN---EGHRQIGIAGIDQYPYTGRKRLAGYKKALKEANIAI  139 (262)
T ss_dssp             EEEESCCCSSSCC---------EEECCHHHHHHHHHHHHHT---TTCCSEEEESCCCSSHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEECCCCCCCC---------EEEECCHHHHHHHHHHHHH---HCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9996246777655---------7887516788899999996---069839997587886768999999999998739866


Q ss_pred             CEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECCCHHHHHHHCCCCCEEE
Q ss_conf             20332379998899999998622267785899806861158999999878--8896499986685899997117884499
Q batch____       190 LVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG--KTGKVLVVGTDGIPEARKMVEAGQMTAT  267 (311)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~d~~a~g~~~al~~~g--~p~di~iig~d~~~~~~~~i~~g~~~~t  267 (311)
                      ....................++..++++++++|.+|..|.++++++++.|  .|+|++++|+|+.+......++   ++|
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aii~~~d~~a~~~~~~l~~~g~~~p~di~i~~~~~~~~~~~~~p~---ltt  216 (262)
T c3clkB_         140 NQEWIKPGDYSYTSGEQAXKAFGKNTDLTGIIAASDXTAIGILNQASSFGIEVPKDLSIVSIDGTEXCKITRPQ---LTS  216 (262)
T ss_dssp             CGGGEECCCSSHHHHHHHHHHHCTTCCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEEECCGGGGSSSSC---CEE
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCC---EEE
T ss_conf             72278538988899999999985068996999941710116899999818988737999823880356424886---028


Q ss_pred             EECCHHHHHHHHHHHHHHHHHCC-CCCCEEEECCEEEECCCCCCC
Q ss_conf             84499999999999999998277-989826524348968460459
Q batch____       268 VAQNPADIGATGLKLMVDAEKSG-KVIPLDKAPEFKLVDSILVTQ  311 (311)
Q Consensus       268 v~~~~~~~G~~av~~l~~~l~~~-~~~~~~~~~~~~li~~~~V~~  311 (311)
                      |.|+++++|+.|+++|+++|+++ ..++..+.+|..||..+.+-|
T Consensus       217 i~~~~~~~g~~A~~~L~~~i~~~~~~~~~~~~i~~~lv~R~St~~  261 (262)
T c3clkB_         217 ISQDFFQXGVTGVQQIHQSVKNGSNRIVSQQFIPVNPVIRKSTAR  261 (262)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHTSCCCCCCEEECCCEEECCSSCCC
T ss_pred             EECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCC
T ss_conf             861989999999999999994899888748998228997573345