BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (128 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q48M04 FeS cluster assembly scaffold IscU n=27 Tax=Bact... 217 9e-56 UniRef50_Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitoch... 207 1e-52 UniRef50_Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochon... 204 9e-52 UniRef50_Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochon... 197 7e-50 UniRef50_Q6FJY3 Iron sulfur cluster assembly protein 1, mitochon... 191 6e-48 UniRef50_B6HTN3 Pc22g17800 protein n=15 Tax=Leotiomyceta RepID=B... 186 2e-46 UniRef50_Q9UTC6 Iron sulfur cluster assembly protein 1, mitochon... 181 5e-45 UniRef50_A8B887 NifU-like protein n=3 Tax=Giardia intestinalis R... 181 6e-45 UniRef50_B3L9M4 NifU protein, putative n=3 Tax=Plasmodium RepID=... 166 2e-40 UniRef50_UPI000023F408 hypothetical protein FG02624.1 n=1 Tax=Gi... 164 6e-40 UniRef50_D2V9S9 Fe-S cluster biogenesis scaffold protein n=1 Tax... 163 2e-39 UniRef50_B6KMM5 NifU protein, putative n=4 Tax=Toxoplasma gondii... 160 1e-38 UniRef50_UPI0000E4A7B0 PREDICTED: similar to NifU-like protein n... 160 2e-38 UniRef50_Q5CXH7 IscU-like NifU protein, iron-sulfur protein n=15... 157 1e-37 UniRef50_Q0CL81 Iron sulfur cluster assembly protein 1, mitochon... 156 2e-37 UniRef50_C7PDA7 Nitrogen-fixing NifU domain protein n=1 Tax=Chit... 148 6e-35 UniRef50_Q2RHY6 Nitrogen-fixing NifU-like n=3 Tax=Clostridia Rep... 148 6e-35 UniRef50_Q4FWA8 Iron-sulfur cluster assembly protein, putative n... 144 9e-34 UniRef50_C9ZYX3 Iron-sulfur cluster assembly protein, putative n... 141 7e-33 UniRef50_D1B842 FeS cluster assembly scaffold protein NifU n=51 ... 141 8e-33 UniRef50_B6QUS0 Iron-sulfur cofactor synthesis protein (Isu1), p... 132 4e-30 UniRef50_Q4UGE0 RNaseP-like protein with Nifu domain, putative n... 130 2e-29 UniRef50_A8ZVA4 Nitrogen-fixing NifU domain protein n=5 Tax=cell... 129 4e-29 UniRef50_O67045 NifU-like protein n=9 Tax=Bacteria RepID=NIFU_AQUAE 128 7e-29 UniRef50_B8CWH6 Nitrogen-fixing NifU domain protein n=8 Tax=cell... 126 2e-28 UniRef50_B5Y9N0 NifU protein n=11 Tax=cellular organisms RepID=B... 124 1e-27 UniRef50_P05340 Nitrogen fixation protein nifU n=15 Tax=cellular... 123 2e-27 UniRef50_B8I3D6 FeS cluster assembly scaffold protein NifU n=30 ... 122 3e-27 UniRef50_D1YVK9 Putative iron sulfur cluster assembly protein n=... 121 6e-27 UniRef50_C5BTF8 Fe-S cluster assembly protein NifU n=4 Tax=Prote... 120 1e-26 UniRef50_P05343 Nitrogen fixation protein nifU n=7 Tax=Bacteria ... 119 4e-26 UniRef50_B8EJ14 Fe-S cluster assembly protein NifU n=6 Tax=Prote... 117 1e-25 UniRef50_Q2LWE9 NifU-like protein involved in Fe-S cluster forma... 115 5e-25 UniRef50_B0VFT7 Putative iron-sulfur cluster assembly scaffold (... 114 9e-25 UniRef50_B7EPE4 cDNA clone:J013066C15, full insert sequence n=1 ... 114 1e-24 UniRef50_P20628 Nitrogen fixation protein nifU n=46 Tax=Bacteria... 112 3e-24 UniRef50_B1L5A7 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 112 4e-24 UniRef50_B4SCB5 Nitrogen-fixing NifU domain protein n=11 Tax=Bac... 110 2e-23 UniRef50_Q2RIL0 Nitrogen-fixing NifU-like n=5 Tax=Clostridia Rep... 109 3e-23 UniRef50_A4J289 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 108 5e-23 UniRef50_B5IVA4 NifU-like N terminal domain protein n=1 Tax=Ther... 107 1e-22 UniRef50_Q39WZ1 Fe-S cluster assembly protein NifU n=33 Tax=cell... 105 4e-22 UniRef50_O09257 NifU n=13 Tax=Bacteria RepID=O09257_CYAP8 102 5e-21 UniRef50_A5FQV7 Nitrogen-fixing NifU domain protein n=5 Tax=Deha... 101 7e-21 UniRef50_B9L9A8 NifU family protein n=6 Tax=Epsilonproteobacteri... 100 1e-20 UniRef50_A0RRI4 Nitrogen fixation protein NifU n=55 Tax=cellular... 100 2e-20 UniRef50_Q74DA8 NifU-like domain protein n=1 Tax=Geobacter sulfu... 99 5e-20 UniRef50_B3E6H1 Nitrogen-fixing NifU domain protein n=1 Tax=Geob... 96 3e-19 UniRef50_A1AQD6 Nitrogen-fixing NifU domain protein n=1 Tax=Pelo... 95 7e-19 UniRef50_B9XEV1 Nitrogen-fixing NifU domain protein n=2 Tax=Verr... 93 2e-18 UniRef50_D1JBD9 Putative NifU-like protein n=2 Tax=uncultured ar... 92 4e-18 UniRef50_A8PKG9 NifU-like protein, putative n=1 Tax=Brugia malay... 92 5e-18 UniRef50_UPI0001746083 putative FeS assembly protein n=1 Tax=Ver... 89 5e-17 UniRef50_D1CFT0 Nitrogen-fixing NifU domain protein n=1 Tax=Ther... 87 2e-16 UniRef50_Q023P2 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 86 4e-16 UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubro... 86 5e-16 UniRef50_D1JAT5 NifU-like protein n=2 Tax=uncultured archaeon Re... 85 9e-16 UniRef50_D1C3Z4 SUF system FeS assembly protein, NifU family n=2... 84 1e-15 UniRef50_Q07HZ2 Nitrogen-fixing NifU domain protein n=7 Tax=Rhod... 82 4e-15 UniRef50_Q3A8K8 NifU-like protein n=3 Tax=Desulfuromonadales Rep... 79 4e-14 UniRef50_A8DR52 NifU n=1 Tax=uncultured bacterium RepID=A8DR52_9... 77 2e-13 UniRef50_A1AQB7 Nitrogen-fixing NifU domain protein n=1 Tax=Pelo... 75 4e-13 UniRef50_B5JY19 FeS cluster assembly scaffold IscU n=1 Tax=gamma... 75 5e-13 UniRef50_Q98AM0 Nitrogen fixation protein; NifU n=2 Tax=Mesorhiz... 74 1e-12 UniRef50_B3T2T4 Putative NifU-like N terminal domain protein n=1... 74 2e-12 UniRef50_A0LFU2 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 73 3e-12 UniRef50_C7NMT9 SUF system FeS assembly protein, NifU family n=7... 73 3e-12 UniRef50_Q1IN98 Nitrogen-fixing NifU-like n=1 Tax=Candidatus Kor... 73 3e-12 UniRef50_B0R7Y3 Iron-sulfur cluster assembly protein n=5 Tax=Hal... 72 4e-12 UniRef50_C7DI52 SUF system FeS assembly protein, NifU family n=1... 72 4e-12 UniRef50_B1ML97 Similarity with Nitrogen-fixing NifU-like protei... 72 7e-12 UniRef50_Q0YR11 Nitrogen-fixing NifU-like:BFD-like (2Fe-2S)-bind... 71 8e-12 UniRef50_A5UR74 SUF system FeS assembly protein, NifU family n=6... 71 9e-12 UniRef50_C8X380 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 70 2e-11 UniRef50_C6C1H8 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 70 3e-11 UniRef50_C7I512 SUF system FeS assembly protein, NifU family n=1... 70 3e-11 UniRef50_B8FAZ4 Nitrogen-fixing NifU domain protein n=2 Tax=Desu... 69 5e-11 UniRef50_A5D4Q3 NifU homolog n=1 Tax=Pelotomaculum thermopropion... 69 5e-11 UniRef50_C6MSR1 Nitrogen-fixing NifU domain protein n=1 Tax=Geob... 69 7e-11 UniRef50_A7NG60 SUF system FeS assembly protein, NifU family n=2... 68 8e-11 UniRef50_A9KE69 IscU n=6 Tax=Coxiella burnetii RepID=A9KE69_COXBN 68 9e-11 UniRef50_Q0F1C8 Putative uncharacterized protein n=1 Tax=Maripro... 68 9e-11 UniRef50_B2GCP7 Nitrogen fixation protein n=69 Tax=Bacilli RepID... 67 1e-10 UniRef50_O32163 NifU-like protein n=159 Tax=Bacillales RepID=NIF... 67 1e-10 UniRef50_B8CH94 FeS assembly protein n=1 Tax=Shewanella piezotol... 67 2e-10 UniRef50_B6BSS9 SUF system FeS assembly protein, NifU family n=3... 65 5e-10 UniRef50_A9A1A8 SUF system FeS assembly protein, NifU family n=4... 65 8e-10 UniRef50_B8HK33 SUF system FeS assembly protein, NifU family n=2... 65 1e-09 UniRef50_C3RKP2 SUF system FeS cluster assembly protein n=6 Tax=... 64 1e-09 UniRef50_C1ZK76 Iron-sulfur cluster biosynthesis protein, NifU-l... 64 1e-09 UniRef50_B4D357 SUF system FeS assembly protein, NifU family n=4... 64 2e-09 UniRef50_B6IR40 SUF system FeS assembly protein, NifU family n=2... 63 2e-09 UniRef50_Q2JCF1 SUF system FeS assembly protein n=86 Tax=Actinob... 63 2e-09 UniRef50_Q1JIL3 IscU protein n=65 Tax=Bacilli RepID=Q1JIL3_STRPD 63 4e-09 UniRef50_C1XI12 SUF system FeS assembly protein, NifU family n=2... 62 4e-09 UniRef50_A9W9Z0 Nitrogen-fixing NifU domain protein n=3 Tax=Chlo... 62 4e-09 UniRef50_C7M3C8 SUF system FeS assembly protein, NifU family n=1... 62 5e-09 UniRef50_B3DY81 NifU-like protein involved in Fe-S cluster forma... 62 5e-09 UniRef50_A5EYF1 SUF system FeS assembly protein, NifU family n=2... 62 6e-09 UniRef50_D2QWB8 SUF system FeS assembly protein, NifU family n=2... 62 7e-09 UniRef50_Q1ATZ0 SUF system FeS assembly protein n=2 Tax=Bacteria... 62 7e-09 UniRef50_Q3JQE2 SUF system FeS assembly protein, NifU family n=3... 61 1e-08 UniRef50_A1WM67 Nitrogen-fixing NifU domain protein n=1 Tax=Verm... 60 2e-08 UniRef50_A6LUJ3 SUF system FeS assembly protein, NifU family n=5... 60 2e-08 UniRef50_Q8F7C7 NifU-like protein n=6 Tax=Leptospira RepID=Q8F7C... 60 2e-08 UniRef50_B8FN62 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 60 2e-08 UniRef50_Q1AZN5 SUF system FeS assembly protein n=1 Tax=Rubrobac... 60 2e-08 UniRef50_A1SV02 SUF system FeS assembly protein, NifU family pro... 60 2e-08 UniRef50_A6Q975 Putative uncharacterized protein n=1 Tax=Sulfuro... 59 5e-08 UniRef50_B7K023 SUF system FeS assembly protein, NifU family n=2... 58 8e-08 UniRef50_B6J805 IscU n=24 Tax=Bacteria RepID=B6J805_COXB1 58 9e-08 UniRef50_UPI0001C31C45 nitrogen-fixing NifU domain protein n=1 T... 58 1e-07 UniRef50_C8P0L7 NifU domain protein n=2 Tax=Erysipelotrichaceae ... 58 1e-07 UniRef50_Q04QC7 NifU related protein associated with Fe-S cluste... 57 1e-07 UniRef50_C9A1I3 SUF system FeS assembly protein n=2 Tax=Firmicut... 57 2e-07 UniRef50_Q7MYK4 Similarities with nitrogen fixation proteins n=2... 57 2e-07 UniRef50_C5NYL7 SUF system FeS assembly protein, NifU family n=1... 56 4e-07 UniRef50_Q02X70 NifU-like protein for Fe-S cluster formation n=2... 55 5e-07 UniRef50_A9NHI3 SUF system FeS cluster assembly protein n=10 Tax... 55 6e-07 UniRef50_D1AKY8 SUF system FeS assembly protein, NifU family n=6... 55 6e-07 UniRef50_Q03A02 Fe-S cluster formation protein, NifU-like n=8 Ta... 55 7e-07 UniRef50_B9KY40 NifU family protein n=1 Tax=Thermomicrobium rose... 55 8e-07 UniRef50_Q60A81 NifU family protein n=1 Tax=Methylococcus capsul... 55 8e-07 UniRef50_B8FIH0 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 55 9e-07 UniRef50_B9L0V2 NifU family protein n=1 Tax=Thermomicrobium rose... 55 9e-07 UniRef50_Q9X192 NifU-like protein n=8 Tax=Thermotogaceae RepID=N... 54 1e-06 UniRef50_B0K2I6 SUF system FeS assembly protein, NifU family n=1... 54 1e-06 UniRef50_A8ZSW4 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 54 1e-06 UniRef50_C0GTN3 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 54 1e-06 UniRef50_A8YU52 NifU-like protein n=4 Tax=Lactobacillus RepID=A8... 54 2e-06 UniRef50_Q2JUE7 SUF system FeS assembly protein, NifU family n=6... 54 2e-06 UniRef50_D1C3Y7 Nitrogen-fixing NifU domain protein n=1 Tax=Spha... 54 2e-06 UniRef50_A0LNT2 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 54 2e-06 UniRef50_C1I2Y9 SUF system FeS assembly protein n=2 Tax=Clostrid... 53 2e-06 UniRef50_C1AC48 Iron-sulfur cluster biosynthesis protein n=1 Tax... 53 2e-06 UniRef50_A0QX03 SUF system FeS assembly protein, NifU family pro... 53 3e-06 UniRef50_C5CEE1 SUF system FeS assembly protein, NifU family n=1... 52 4e-06 UniRef50_Q01180 Nitrogen fixation protein nifU n=6 Tax=Rhodobact... 52 6e-06 UniRef50_Q2LWF0 NifU-like protein involved in Fe-S cluster forma... 52 6e-06 UniRef50_A0LFS6 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 52 7e-06 UniRef50_A7H8S0 SUF system FeS assembly protein, NifU family n=3... 51 1e-05 UniRef50_B8FDL0 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 51 1e-05 UniRef50_C8WNS3 Nitrogen-fixing NifU domain protein n=3 Tax=Cori... 50 2e-05 UniRef50_C0QAY3 Predicted iron-sulfur cluster assembly protein (... 50 2e-05 UniRef50_C1VDX7 Cysteine desulfurase n=2 Tax=Halobacteriaceae Re... 50 2e-05 UniRef50_Q6APN8 Related to nitrogen fixation protein (NifU) n=1 ... 50 2e-05 UniRef50_A9BJG9 SUF system FeS assembly protein, NifU family n=1... 50 3e-05 UniRef50_A1ZYV1 SUF system FeS assembly protein, NifU family n=1... 50 3e-05 UniRef50_C0WNL2 Iron-sulfur (Fe-S) cluster formation protein Isc... 50 3e-05 UniRef50_C7DHB6 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 50 3e-05 UniRef50_A8S193 Putative uncharacterized protein n=1 Tax=Clostri... 49 4e-05 UniRef50_Q1WR14 IscU protein n=10 Tax=Lactobacillus RepID=Q1WR14... 49 6e-05 UniRef50_A8F547 Nitrogen-fixing NifU domain protein n=1 Tax=Ther... 49 6e-05 UniRef50_Q1DD56 SUF system FeS assembly protein, NifU family n=2... 49 6e-05 UniRef50_B0S0D2 Iron-sulfur cofactor synthesis protein NifU homo... 49 6e-05 UniRef50_Q65JA1 Fe-S cluster formation protein n=3 Tax=Bacillus ... 49 7e-05 UniRef50_UPI00001D2CFF iscU protein n=1 Tax=Gloeobacter violaceu... 48 9e-05 UniRef50_A5ICQ0 NifU family iron binding protein, [Fe-S] cluster... 48 1e-04 UniRef50_A6Q4J9 Putative uncharacterized protein n=1 Tax=Nitrati... 48 1e-04 UniRef50_D2EEV4 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 47 2e-04 UniRef50_B1AJ94 SUF system FeS assembly protein, NifU family n=1... 47 2e-04 UniRef50_B1VAA5 NifU homolog n=3 Tax=Candidatus Phytoplasma RepI... 47 2e-04 UniRef50_Q98R36 NITROGEN FIXATION PROTEIN NIFU n=1 Tax=Mycoplasm... 47 2e-04 UniRef50_Q1J1X4 SUF system FeS assembly protein n=4 Tax=Deinococ... 46 3e-04 UniRef50_Q21XB3 SUF system FeS assembly protein n=6 Tax=Bacteria... 46 3e-04 UniRef50_A4EB20 Putative uncharacterized protein n=1 Tax=Collins... 46 4e-04 UniRef50_C9KQH6 SUF system FeS assembly protein, NifU family n=1... 45 5e-04 UniRef50_C4Z7J6 Nitrogen fixation protein NifU-like protein n=10... 45 5e-04 UniRef50_D2LAE9 Nitrogen-fixing NifU domain protein n=2 Tax=Desu... 45 9e-04 UniRef50_Q6MEW2 Putative iron-sulfur cluster assembly protein ni... 45 0.001 UniRef50_C0D022 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.001 UniRef50_C4XEA9 Putative uncharacterized protein n=1 Tax=Mycopla... 44 0.001 UniRef50_D2RA02 SUF system FeS assembly protein, NifU family n=1... 44 0.002 UniRef50_Q7NBI8 Putative uncharacterized protein n=1 Tax=Mycopla... 43 0.003 UniRef50_Q0AAQ4 SUF system FeS assembly protein, NifU family n=5... 42 0.005 UniRef50_Q04EW3 Fe-S cluster formation protein, NifU-like n=1 Ta... 42 0.005 UniRef50_C7MD35 SUF system FeS assembly protein, NifU family n=1... 42 0.007 UniRef50_O42770 Putative uncharacterized protein (Fragment) n=1 ... 42 0.007 UniRef50_C6N0B9 NifU family iron binding protein n=2 Tax=Legione... 42 0.008 UniRef50_D0RPD7 SUF system FeS assembly protein, NifU family n=1... 40 0.017 UniRef50_C9LR10 SUF system FeS assembly protein, NifU family n=1... 40 0.021 UniRef50_C0QB63 Putative nitrogen fixation protein NifU (NifU-li... 40 0.023 UniRef50_C2BX07 Possible iron-sulfur (Fe-S) cluster formation pr... 40 0.026 UniRef50_Q6KIL2 Aminotransferase protein U homolog n=1 Tax=Mycop... 40 0.028 UniRef50_Q03GT9 Fe-S cluster formation protein, NifU-like n=3 Ta... 39 0.034 UniRef50_Q14L11 Putative iron-sulfur cluster assembly protein n=... 39 0.034 UniRef50_D0WJI3 Putative type I restriction-modification system,... 39 0.038 UniRef50_Q4A687 Nitrogen fixation protein NifU n=2 Tax=Mycoplasm... 39 0.054 UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)... 39 0.061 >UniRef50_Q48M04 FeS cluster assembly scaffold IscU n=27 Tax=Bacteria RepID=Q48M04_PSE14 Length = 128 Score = 217 bits (553), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 99/125 (79%), Positives = 114/125 (91%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MAYSEKVIDHYENPRNVG + D +VG+GMVGAPACGDVM+LQIKVN++G+IEDA+FKT Sbjct: 1 MAYSEKVIDHYENPRNVGKMNAEDPDVGTGMVGAPACGDVMRLQIKVNEQGVIEDAKFKT 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 YGCGSAIASSSL TEW+KGK+LDEA+ IKNT +AEEL LPPVKIHCS+LAEDAIKAA+ D Sbjct: 61 YGCGSAIASSSLATEWMKGKTLDEAETIKNTQLAEELALPPVKIHCSVLAEDAIKAAVRD 120 Query: 121 YKSKR 125 YK K+ Sbjct: 121 YKQKK 125 >UniRef50_Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial n=633 Tax=root RepID=ISCU_HUMAN Length = 167 Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 95/126 (75%), Positives = 113/126 (89%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +KV+DHYENPRNVGS D +NVG+G+VGAPACGDVMKLQI+V+++G I DARFKT+G Sbjct: 35 YHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFG 94 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSSL TEWVKGK+++EA IKNTDIA+EL LPPVK+HCS+LAEDAIKAA+ADYK Sbjct: 95 CGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYK 154 Query: 123 SKREAK 128 K+E K Sbjct: 155 LKQEPK 160 >UniRef50_Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochondrial n=82 Tax=cellular organisms RepID=ISU1_YARLI Length = 181 Score = 204 bits (518), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 93/126 (73%), Positives = 111/126 (88%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y EKV+DHY NPRNVGS + NDE+VG+G+VGAPACGDVMKLQI+V+D G+I+D +FKT+G Sbjct: 37 YHEKVLDHYNNPRNVGSMNKNDEDVGTGLVGAPACGDVMKLQIRVDDNGVIQDVKFKTFG 96 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSS VTE V+GKSL EA IKNT IA+EL LPPVK+HCS+LAEDAIK+AI+DY Sbjct: 97 CGSAIASSSYVTELVRGKSLAEAGKIKNTVIAKELSLPPVKLHCSMLAEDAIKSAISDYN 156 Query: 123 SKREAK 128 SKR+ K Sbjct: 157 SKRKTK 162 >UniRef50_Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochondrial n=6 Tax=Dikarya RepID=ISU1_KLULA Length = 180 Score = 197 bits (502), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 91/124 (73%), Positives = 108/124 (87%), Gaps = 1/124 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 Y KVIDHY NPRNVGS D N NVG+G+VGAPACGDVMKLQI+VNDE G+IE+ +FKT+ Sbjct: 51 YHPKVIDHYTNPRNVGSLDKNLPNVGTGLVGAPACGDVMKLQIQVNDETGVIENVKFKTF 110 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS +TE V+GK+L++A IKNT+IA EL LPPVK+HCS+LAEDAIKAAI DY Sbjct: 111 GCGSAIASSSYMTELVRGKTLEDAAKIKNTEIARELSLPPVKLHCSMLAEDAIKAAIKDY 170 Query: 122 KSKR 125 ++KR Sbjct: 171 QAKR 174 >UniRef50_Q6FJY3 Iron sulfur cluster assembly protein 1, mitochondrial n=3 Tax=Dikarya RepID=ISU1_CANGA Length = 213 Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 90/126 (71%), Positives = 106/126 (84%), Gaps = 1/126 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 Y KVI+HY +PRNVGS D NVG+G+VGAPACGDVM+LQIKVND+ G+IED +FKT+ Sbjct: 83 YHPKVIEHYTHPRNVGSMDKTLPNVGTGLVGAPACGDVMRLQIKVNDKTGVIEDVKFKTF 142 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS +TE V G +LD+A IKNT IA+EL LPPVK+HCS+LAEDAIKAAI DY Sbjct: 143 GCGSAIASSSYMTELVHGMTLDDAAKIKNTTIAKELSLPPVKLHCSMLAEDAIKAAIKDY 202 Query: 122 KSKREA 127 KSKR + Sbjct: 203 KSKRTS 208 >UniRef50_B6HTN3 Pc22g17800 protein n=15 Tax=Leotiomyceta RepID=B6HTN3_PENCW Length = 199 Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 87/124 (70%), Positives = 105/124 (84%), Gaps = 1/124 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 Y EKV+DHY NPRNVGS D++VG+G+VGAPACGDVMKLQI+VN D G I+D FKT Sbjct: 47 GYHEKVLDHYNNPRNVGSMKKGDQDVGTGLVGAPACGDVMKLQIRVNKDSGRIDDVVFKT 106 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIASSS +TE V+G +LDEA IKNTD+A+EL LPPVK+HCS+LAEDAIK+AIA+ Sbjct: 107 FGCGSAIASSSYLTELVRGMTLDEAGKIKNTDVAKELCLPPVKLHCSMLAEDAIKSAIAN 166 Query: 121 YKSK 124 Y +K Sbjct: 167 YYTK 170 >UniRef50_Q9UTC6 Iron sulfur cluster assembly protein 1, mitochondrial n=5 Tax=Dikarya RepID=ISU1_SCHPO Length = 192 Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 81/123 (65%), Positives = 101/123 (82%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+DHY NPRNVG+ D +VG G+VGAPACGDVM+L I+VN +G+IED +FKT+G Sbjct: 54 YHKNVLDHYNNPRNVGTLPKGDPDVGIGLVGAPACGDVMRLAIRVNKDGVIEDVKFKTFG 113 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSS VT VKG +L+EA IKNT IA+EL LPPVK+HCS+LAEDAIK+A+ Y+ Sbjct: 114 CGSAIASSSYVTTMVKGMTLEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVKHYR 173 Query: 123 SKR 125 SK+ Sbjct: 174 SKQ 176 >UniRef50_A8B887 NifU-like protein n=3 Tax=Giardia intestinalis RepID=A8B887_GIALA Length = 212 Score = 181 bits (459), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 82/126 (65%), Positives = 105/126 (83%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE + HY P N+G+ D++DE+VGSG+VGAPACGDVM+LQIKV D+G I +A+FKT+G Sbjct: 80 YSELAMQHYRTPVNIGTLDDDDEHVGSGLVGAPACGDVMRLQIKVGDDGKISEAKFKTFG 139 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CG+AIASSS T ++GKSL+EA IKNTDI+++L LPPVK+HCS+LAEDAI+ AI DYK Sbjct: 140 CGAAIASSSYATSLLQGKSLEEASQIKNTDISDKLGLPPVKLHCSVLAEDAIRQAIDDYK 199 Query: 123 SKREAK 128 KR +K Sbjct: 200 RKRGSK 205 >UniRef50_B3L9M4 NifU protein, putative n=3 Tax=Plasmodium RepID=B3L9M4_PLAKH Length = 170 Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/123 (62%), Positives = 98/123 (79%), Gaps = 1/123 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 +YS+ V DH+ PRNVGSFD N++N+G+ +VG +CGDV+KLQ+K+ D +I+DARF + Sbjct: 46 SYSDHVKDHFNKPRNVGSFDKNEKNIGTSIVGKASCGDVIKLQLKIEDN-VIKDARFMAF 104 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS TE +KGK++DEA IKN DIA L LPPVKIHCS+LAEDAIK AI +Y Sbjct: 105 GCGSAIASSSYATELIKGKTIDEALKIKNNDIASHLSLPPVKIHCSLLAEDAIKHAIKNY 164 Query: 122 KSK 124 + K Sbjct: 165 REK 167 >UniRef50_UPI000023F408 hypothetical protein FG02624.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F408 Length = 211 Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 82/143 (57%), Positives = 104/143 (72%), Gaps = 20/143 (13%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKT 60 +Y EKV+DHY PRNVGS + D +VG+G+VGAPACGDVMKLQI+V+ E I + +FKT Sbjct: 42 SYHEKVLDHYSRPRNVGSMNKKDADVGTGLVGAPACGDVMKLQIRVDPETQKISEVKFKT 101 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVK----------------- 103 +GCGSAIASSS +TE V+G SLD+A +KNT+IA+EL LPPVK Sbjct: 102 FGCGSAIASSSYLTELVRGMSLDDAGKVKNTEIAKELCLPPVKRTLSHHAAYYIDTQTDF 161 Query: 104 --IHCSILAEDAIKAAIADYKSK 124 +HCS+LAEDAIK+AI+DY +K Sbjct: 162 NIVHCSMLAEDAIKSAISDYYTK 184 >UniRef50_D2V9S9 Fe-S cluster biogenesis scaffold protein n=1 Tax=Naegleria gruberi RepID=D2V9S9_NAEGR Length = 179 Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 74/119 (62%), Positives = 92/119 (77%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+KVIDH++NPRN GS D D NVG+ +VGAP+CGDV+K QI V+D G + DA+FK +G Sbjct: 40 YSDKVIDHHKNPRNSGSLDAKDANVGTALVGAPSCGDVLKFQILVDDNGKVIDAKFKAFG 99 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 CGSAIASSS TE VKGK++++ I N DIA L LPPVK HCS+LAE+AI+ A DY Sbjct: 100 CGSAIASSSYATELVKGKTIEDCMMITNNDIASHLSLPPVKKHCSLLAEEAIRKATEDY 158 >UniRef50_B6KMM5 NifU protein, putative n=4 Tax=Toxoplasma gondii RepID=B6KMM5_TOXGO Length = 219 Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 77/128 (60%), Positives = 99/128 (77%), Gaps = 5/128 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNND----ENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARF 58 YS+KV +H+ NP+N G+FD +D VG+ +VG ACGDV+KLQ+ V D G I DARF Sbjct: 66 YSKKVHEHFFNPKNAGAFDLSDPETRSKVGTAVVGKAACGDVIKLQVLVED-GKIRDARF 124 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAI 118 KT+GCGSAIASSS TE +KGK+ D+A +KNTDIAE L LPPVK+HCS+LAEDA++ AI Sbjct: 125 KTFGCGSAIASSSYATELIKGKTCDDALKLKNTDIAEYLNLPPVKVHCSLLAEDAVRHAI 184 Query: 119 ADYKSKRE 126 DY+ K++ Sbjct: 185 LDYQKKQK 192 >UniRef50_UPI0000E4A7B0 PREDICTED: similar to NifU-like protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A7B0 Length = 163 Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 74/128 (57%), Positives = 101/128 (78%), Gaps = 1/128 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKT 60 +Y + VIDHYENPRNVG+ D ND+NVG+G+VGAPACGDVMKLQ++++D+ I++ Sbjct: 31 SYHKNVIDHYENPRNVGAMDKNDKNVGTGLVGAPACGDVMKLQVQISDKKHGIDNVAISD 90 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 GC S +++S T +G +DEA+ IKNTDIA+EL LPPVK+HCS+LAEDAIKAA+ D Sbjct: 91 VGCCSLMSTSMEYTNLCRGMHVDEAKDIKNTDIAKELSLPPVKLHCSMLAEDAIKAALQD 150 Query: 121 YKSKREAK 128 Y+ K+++K Sbjct: 151 YRVKQDSK 158 >UniRef50_Q5CXH7 IscU-like NifU protein, iron-sulfur protein n=15 Tax=cellular organisms RepID=Q5CXH7_CRYPV Length = 150 Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 72/125 (57%), Positives = 98/125 (78%), Gaps = 1/125 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + YS+ V DH+ NPRNVGS ++D+NVG+ +VG +CGDV+KLQ+ + D GII+DA+FKT Sbjct: 24 LFYSDTVHDHFRNPRNVGSLPSDDKNVGTAVVGKASCGDVVKLQVDIRD-GIIKDAKFKT 82 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIAS+S TE + GK+ +EA I N IA+ L LPP+K+HCS+LAEDAIK AI + Sbjct: 83 FGCGSAIASTSYATELIIGKTTEEALKINNKTIADHLNLPPIKLHCSLLAEDAIKHAIKN 142 Query: 121 YKSKR 125 Y+ K+ Sbjct: 143 YQDKQ 147 >UniRef50_Q0CL81 Iron sulfur cluster assembly protein 1, mitochondrial n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CL81_ASPTN Length = 179 Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 78/139 (56%), Positives = 100/139 (71%), Gaps = 21/139 (15%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE----------GIIE-- 54 ++DHY NPRNVGS + D +VGSG+VGAPACGDVMKLQI+V+ + II+ Sbjct: 7 LLDHYNNPRNVGSMNRKDLDVGSGLVGAPACGDVMKLQIRVDKDTNTISGTPPPSIIDIM 66 Query: 55 ---------DARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIH 105 D +FKT+GCGSAIASSS +TE V+G +L+EA + N IA+EL LPPVK+H Sbjct: 67 DDPANMLTIDVKFKTFGCGSAIASSSYLTELVRGMTLEEAGKVTNVAIAKELCLPPVKLH 126 Query: 106 CSILAEDAIKAAIADYKSK 124 CS+LAEDAIK+AI+DY +K Sbjct: 127 CSMLAEDAIKSAISDYYTK 145 >UniRef50_C7PDA7 Nitrogen-fixing NifU domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDA7_CHIPD Length = 149 Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 65/125 (52%), Positives = 96/125 (76%), Gaps = 1/125 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFK 59 MAY+E+V+D+Y NPRN G+ D + VG+G++ P +V+++QI+V+ + +I DARFK Sbjct: 3 MAYAERVLDYYNNPRNAGTLDKSSPQVGTGLIHVPEYIEVVRIQIEVSPKRHVIMDARFK 62 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 T+GCG+AIA++S+ TEW+KGK+++EA + + DI E L LPP KIH +IL EDA+KAAI Sbjct: 63 TFGCGAAIAATSITTEWLKGKTIEEAARLDHMDIVEALSLPPAKIHATILIEDAVKAAIN 122 Query: 120 DYKSK 124 DY+ K Sbjct: 123 DYRFK 127 >UniRef50_Q2RHY6 Nitrogen-fixing NifU-like n=3 Tax=Clostridia RepID=Q2RHY6_MOOTA Length = 125 Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 73/125 (58%), Positives = 95/125 (76%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSEKV+DH+ NPRNVG +N D G G VG P CGD+M+L IKV D GII+D +FKT+G Sbjct: 2 YSEKVMDHFTNPRNVGEIENAD---GVGQVGNPVCGDIMRLYIKVED-GIIKDVKFKTFG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG+AIA+SS+VTE VKGK+++EA I N +AE L+ LPP K+HCS LA DA+ AI DY Sbjct: 58 CGAAIATSSMVTEMVKGKTVEEALKISNAAVAEALDGLPPQKMHCSNLAADALHKAIEDY 117 Query: 122 KSKRE 126 +++ + Sbjct: 118 QNRNK 122 >UniRef50_Q4FWA8 Iron-sulfur cluster assembly protein, putative n=9 Tax=Eukaryota RepID=Q4FWA8_LEIMA Length = 161 Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 71/123 (57%), Positives = 96/123 (78%), Gaps = 1/123 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTY 61 YS+KV DHY+NPRNVG D ND NVG+G+ GAP CGD+ ++Q+KVN D +IED +FK + Sbjct: 20 YSDKVQDHYKNPRNVGKLDKNDPNVGTGLRGAPECGDMTQMQVKVNPDTLVIEDVKFKAF 79 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIA+SS ++ ++GK++ +A + N DIA EL LPPVK+HCS+LAE+ I AA+ +Y Sbjct: 80 GCGSAIAASSYASQAIRGKTVADALKLTNKDIAHELSLPPVKLHCSMLAEETIHAAVENY 139 Query: 122 KSK 124 SK Sbjct: 140 LSK 142 >UniRef50_C9ZYX3 Iron-sulfur cluster assembly protein, putative n=3 Tax=Trypanosoma RepID=C9ZYX3_TRYBG Length = 180 Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 69/123 (56%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 YS V +HY NPRNVG D +D NVG+G+ GAP CGD+ ++Q+KVN E +IED +FK + Sbjct: 22 YSPLVEEHYNNPRNVGKLDKSDPNVGTGLRGAPECGDMTQMQVKVNPETMVIEDVKFKAF 81 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIA+SS ++ ++GK+L EA + N IA+EL LPPVK+HCS+LAE+ I+AA+ +Y Sbjct: 82 GCGSAIAASSYASQAIRGKTLAEALQLTNKRIAQELSLPPVKLHCSMLAEETIQAAVENY 141 Query: 122 KSK 124 SK Sbjct: 142 LSK 144 >UniRef50_D1B842 FeS cluster assembly scaffold protein NifU n=51 Tax=cellular organisms RepID=D1B842_THEAS Length = 150 Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 70/129 (54%), Positives = 93/129 (72%), Gaps = 5/129 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MAYSEKV+ ++ NP NVG + D G G VG P CGDVMK+ +++ D G IED RF+T Sbjct: 1 MAYSEKVVQYFMNPVNVGELPDPD---GVGEVGNPKCGDVMKIYLRIRD-GKIEDVRFQT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 +GC +AIA+SS+VTE VKGK++DEA + N D+AE L LPP K+HCS+LAE I+AAI Sbjct: 57 FGCAAAIATSSMVTEMVKGKTIDEALNVTNKDVAEALGGLPPEKVHCSLLAEQGIRAAIE 116 Query: 120 DYKSKREAK 128 DY ++ + Sbjct: 117 DYLRRQRGE 125 >UniRef50_B6QUS0 Iron-sulfur cofactor synthesis protein (Isu1), putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QUS0_PENMQ Length = 189 Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 8/131 (6%) Query: 1 MAYSEKVIDHYENPRN---VGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDA 56 M ++ + H N N VGS D +VGSG+VGAPA ++L I+V+++ G I + Sbjct: 43 MPTTKALFIHRHNHANLKLVGSLDRKSNDVGSGLVGAPA----IRLDIQVDEKTGKIVKS 98 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKA 116 FKT+GCGSAIASSS +T + GK+L+EA I+NT IA EL LPPVK+HCS+LAEDAIKA Sbjct: 99 AFKTFGCGSAIASSSYLTTLLAGKTLEEAGKIQNTQIANELCLPPVKLHCSLLAEDAIKA 158 Query: 117 AIADYKSKREA 127 AI +Y+SKR A Sbjct: 159 AIKNYQSKRPA 169 >UniRef50_Q4UGE0 RNaseP-like protein with Nifu domain, putative n=1 Tax=Theileria annulata RepID=Q4UGE0_THEAN Length = 261 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 1/97 (1%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS +V DH+ NPRNVGSFD +D +VG+ +VG ACGDV+KLQ+K+ DE +IEDA FKT+G Sbjct: 154 YSPEVNDHFNNPRNVGSFDKDDPSVGTAIVGKAACGDVIKLQVKIKDE-VIEDACFKTFG 212 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELEL 99 CGSAIASSS VTE VKGK+ EA AIKNTDI+ L Sbjct: 213 CGSAIASSSYVTEMVKGKTCKEALAIKNTDISGTFLL 249 >UniRef50_A8ZVA4 Nitrogen-fixing NifU domain protein n=5 Tax=cellular organisms RepID=A8ZVA4_DESOH Length = 173 Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/129 (50%), Positives = 89/129 (68%), Gaps = 5/129 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS+ V+DH+ NPRNVG +N G G VG P CGD+M + + + D+ I D +F+T Sbjct: 1 MIYSKTVMDHFRNPRNVGVIENA---AGVGEVGNPICGDMMTIYLDIQDDRIA-DIKFQT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIA 119 +GCGSAIA SS++TE KGK+L+EA+ I N D+AE LE LP K+HCS L DA++ AI Sbjct: 57 FGCGSAIAVSSMLTELAKGKTLEEAKKITNKDVAEALEGLPKNKLHCSNLGADALQMAIK 116 Query: 120 DYKSKREAK 128 DY+ ++ K Sbjct: 117 DYEDRKAGK 125 >UniRef50_O67045 NifU-like protein n=9 Tax=Bacteria RepID=NIFU_AQUAE Length = 157 Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 67/125 (53%), Positives = 83/125 (66%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 Y+EKV+DH+ NPRNVG ++ + G G G PACGD M IKVN E +IED RFKT+ Sbjct: 5 YNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTF 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIA SS++TE VKGK + A + DI EEL LPP KIHC+ L + + AI D Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKD 121 Query: 121 YKSKR 125 Y K+ Sbjct: 122 YLMKQ 126 >UniRef50_B8CWH6 Nitrogen-fixing NifU domain protein n=8 Tax=cellular organisms RepID=B8CWH6_HALOH Length = 138 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSEKV++H+ NPRNVG + D G VG P CGD++KL +K+ D+ IED +FKT+G Sbjct: 2 YSEKVMEHFNNPRNVGEIKDAD---AVGEVGNPVCGDIIKLYLKIKDD-TIEDIKFKTFG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG+A+A+SS+VTE VKGK +DEA + +AE L+ LP K+HCS LA DA+ AI Y Sbjct: 58 CGAAVATSSMVTELVKGKKIDEALKVSKETVAEALDGLPSNKMHCSNLAADALHKAIKSY 117 Query: 122 KSK 124 K Sbjct: 118 NKK 120 >UniRef50_B5Y9N0 NifU protein n=11 Tax=cellular organisms RepID=B5Y9N0_COPPD Length = 212 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/125 (48%), Positives = 91/125 (72%), Gaps = 5/125 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y+ KVI+H++NP N G +N D +VG+PACGD + + +K+N++ +IED +F++ Sbjct: 3 IKYNPKVIEHFKNPHNQGVIENPD---AEALVGSPACGDQIAIYLKINND-VIEDIKFES 58 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 YGC S IA++S+VT+ KGK+L+EA +IK T+ +EL LPPVK HCS+LA D ++AAI Sbjct: 59 YGCASNIATASIVTDLAKGKTLEEALSIKWTEAVQELGGLPPVKYHCSVLAVDGLRAAIK 118 Query: 120 DYKSK 124 DY K Sbjct: 119 DYLRK 123 >UniRef50_P05340 Nitrogen fixation protein nifU n=15 Tax=cellular organisms RepID=NIFU_AZOVI Length = 312 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/124 (50%), Positives = 91/124 (73%), Gaps = 5/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 YSEKV +H+ NP+N G+ + + G VG+ +CGD ++L +KV+ E +I DA F+T+ Sbjct: 4 YSEKVKEHFYNPKNAGAVEGAN---AIGDVGSLSCGDALRLTLKVDPETDVILDAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE VKG +LDEA I N DIA+ L+ LPP K+HCS++ +A++AA+A+ Sbjct: 61 GCGSAIASSSALTEMVKGLTLDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAN 120 Query: 121 YKSK 124 Y+ + Sbjct: 121 YRGE 124 >UniRef50_B8I3D6 FeS cluster assembly scaffold protein NifU n=30 Tax=cellular organisms RepID=B8I3D6_CLOCE Length = 153 Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/123 (54%), Positives = 92/123 (74%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSEKV+DH+ NPRNVG ++ D G G VG CGD+MK+ +K+ D I+ DA+FKT+G Sbjct: 2 YSEKVMDHFSNPRNVGEIEDAD---GVGQVGNSKCGDIMKMYLKIEDN-IVVDAKFKTFG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG+A+A+SS+ TE VKGK+++EA I N +AE L+ LPP K+HCS LAE+AI AA+ DY Sbjct: 58 CGAAVATSSMATELVKGKTVEEAMNITNKAVAEALDGLPPAKMHCSNLAEEAIAAALTDY 117 Query: 122 KSK 124 + + Sbjct: 118 RKR 120 >UniRef50_D1YVK9 Putative iron sulfur cluster assembly protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YVK9_METPS Length = 151 Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 5/128 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS KV+ H+ NP+NVG + D G G VG P CGD+M + IKV D + D +FKT Sbjct: 1 MMYSPKVMQHFSNPQNVGEIPDAD---GVGEVGNPVCGDLMTIYIKVKDNKL-SDIKFKT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 +GC +AIA+SS++T KG +L++A I D+A+EL LPP K+HCS LA DA+K AI Sbjct: 57 FGCAAAIATSSIITTMAKGMTLEDAVKISRNDVAKELGGLPPQKMHCSNLAADALKLAIE 116 Query: 120 DYKSKREA 127 +Y+ K + Sbjct: 117 NYRRKLQG 124 >UniRef50_C5BTF8 Fe-S cluster assembly protein NifU n=4 Tax=Proteobacteria RepID=C5BTF8_TERTT Length = 317 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/122 (49%), Positives = 90/122 (73%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 YSEKV +H+ +P+N G+ + + +G VG+ +CGD ++L +KV+ II+DA F+T+ Sbjct: 4 YSEKVKEHFFDPKNAGAVADAN---ATGDVGSLSCGDALRLTLKVDPATDIIQDAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE +KG +DEA I N DIA+ L+ LPP K+HCS++ +A++AA+AD Sbjct: 61 GCGSAIASSSALTEMIKGLHVDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAD 120 Query: 121 YK 122 Y+ Sbjct: 121 YR 122 >UniRef50_P05343 Nitrogen fixation protein nifU n=7 Tax=Bacteria RepID=NIFU_KLEPN Length = 274 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 60/124 (48%), Positives = 89/124 (71%), Gaps = 5/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 YSEKV DH+ NPRN DN + G VG+ +CGD ++L ++V+ + IIE+A F+T+ Sbjct: 4 YSEKVKDHFFNPRNARVVDNAN---AVGDVGSLSCGDALRLMLRVDPQSEIIEEAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE + G +L EA I N IA+ L+ LPP K+HCS++ ++A++AAIA+ Sbjct: 61 GCGSAIASSSALTELIIGHTLAEAGQITNQQIADYLDGLPPEKMHCSVMGQEALRAAIAN 120 Query: 121 YKSK 124 ++ + Sbjct: 121 FRGE 124 >UniRef50_B8EJ14 Fe-S cluster assembly protein NifU n=6 Tax=Proteobacteria RepID=B8EJ14_METSB Length = 344 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/122 (47%), Positives = 85/122 (69%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 YS+K+ DH+ NP+N G + + G GA +CGD +KL +KV+ +I DARF+T+ Sbjct: 13 YSDKIKDHFFNPKNAGPLADAN---AVGEAGALSCGDALKLMLKVDPLTEVILDARFQTF 69 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE + GK++ +A + N IAE L LPP K+HC++L DA++AAIA+ Sbjct: 70 GCGSAIASSSALTELIIGKTIVQAAGLTNQQIAESLGGLPPEKMHCAVLGHDALQAAIAN 129 Query: 121 YK 122 ++ Sbjct: 130 FR 131 >UniRef50_Q2LWE9 NifU-like protein involved in Fe-S cluster formation with 2Fe-2S domain n=2 Tax=Bacteria RepID=Q2LWE9_SYNAS Length = 229 Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 87/123 (70%), Gaps = 4/123 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++KV +H+ NPRNVG +N D G G VG+ ACGD ++L K+++ I++A+FK++G Sbjct: 4 YTDKVREHFWNPRNVGEVENPD---GIGQVGSLACGDALRLTFKLDENKRIKEAKFKSFG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C SAIA++S++TE V G ++++A+ I N DIA L LP K+HCS+L E ++ AIA Y Sbjct: 61 CASAIAAASVLTEMVVGLTIEQAEKITNQDIAAALGGLPEQKMHCSVLGEQVLEKAIACY 120 Query: 122 KSK 124 + + Sbjct: 121 RGR 123 >UniRef50_B0VFT7 Putative iron-sulfur cluster assembly scaffold (IscU module) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFT7_9BACT Length = 207 Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 86/124 (69%), Gaps = 5/124 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFK 59 M YS+KV+DH+ +P NVG +N D G+PACGD + + +KV+D+ I D F Sbjct: 1 MQYSQKVLDHFMHPHNVGKMENPD---AVATEGSPACGDQVTVYLKVDDKTKTITDISFL 57 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAI 118 +YGC S IA++S++T+ KGK+L+EA+ I D + L+ LPPVK+HCS+LA D +++AI Sbjct: 58 SYGCASNIATASIITDMAKGKTLEEAKKITWRDAMDALDGLPPVKVHCSVLAADTLQSAI 117 Query: 119 ADYK 122 ++Y+ Sbjct: 118 SNYE 121 >UniRef50_B7EPE4 cDNA clone:J013066C15, full insert sequence n=1 Tax=Oryza sativa Japonica Group RepID=B7EPE4_ORYSJ Length = 123 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 53/72 (73%), Positives = 65/72 (90%), Gaps = 1/72 (1%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKT 60 AY E+V+DHYENPRNVGSF+N+D +VG+G+VGAPACGDVMKLQI+V++ G I DA FKT Sbjct: 33 AYHERVVDHYENPRNVGSFENDDPSVGTGLVGAPACGDVMKLQIRVDESSGKIVDACFKT 92 Query: 61 YGCGSAIASSSL 72 +GCGSAIASSS+ Sbjct: 93 FGCGSAIASSSV 104 >UniRef50_P20628 Nitrogen fixation protein nifU n=46 Tax=Bacteria RepID=NIFU_ANASP Length = 300 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/125 (47%), Positives = 88/125 (70%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDE---NVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARF 58 Y++KV++ + +P+N G + N E V +G VG+ ACGD ++L IKV E I D+RF Sbjct: 4 YTDKVLELFYDPKNQGVIEENGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAA 117 +T+GC SAIASSS +TE +KG +LDEA + N DIA+ L LP K+HCS++ ++A++AA Sbjct: 64 QTFGCTSAIASSSALTEMIKGLTLDEALKVSNKDIADYLGGLPEAKMHCSVMGQEALEAA 123 Query: 118 IADYK 122 I +Y+ Sbjct: 124 IYNYR 128 >UniRef50_B1L5A7 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5A7_KORCO Length = 160 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 84/122 (68%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y+ +V++ + P+N+G D+ D G+PACGDV+ + +++ D G+IEDA+F++ Sbjct: 7 LPYTPRVLELFREPKNLGRIDDAD---AFAQAGSPACGDVISIYLRIRD-GVIEDAKFES 62 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 YGC + IA++S++TE VKGK L+EA I IA+EL LPPVK HCSILA A++ AI Sbjct: 63 YGCAANIAAASVLTEIVKGKRLEEAWNIDWQQIADELGGLPPVKKHCSILAVGALRRAIR 122 Query: 120 DY 121 Y Sbjct: 123 RY 124 >UniRef50_B4SCB5 Nitrogen-fixing NifU domain protein n=11 Tax=Bacteria RepID=B4SCB5_PELPB Length = 203 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 2/125 (1%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 AYS+K+ +H+ NP+N+ +N D+ G GM G CGD M + IKV+ E I D ++KT Sbjct: 8 AYSDKLKEHFMNPKNILQGENTDDFDGVGMEGNLQCGDQMMVVIKVDKEKETITDCQWKT 67 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 YGC SAIAS+S+++E VKG++LD A I ++A EL LP KIHCS+L + A+++AI Sbjct: 68 YGCASAIASTSVLSEMVKGRTLDAAFHISPKEVALELGGLPDHKIHCSVLGDKALRSAIN 127 Query: 120 DYKSK 124 +Y ++ Sbjct: 128 NYYTR 132 >UniRef50_Q2RIL0 Nitrogen-fixing NifU-like n=5 Tax=Clostridia RepID=Q2RIL0_MOOTA Length = 139 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/126 (43%), Positives = 83/126 (65%), Gaps = 5/126 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + VIDH+ NPRNVG ++ D G G +G P CGD + + IKV D ++ D +F+ +G Sbjct: 2 YGDLVIDHFLNPRNVGRIEDAD---GIGAIGDPGCGDYLCIYIKVRDNRLV-DVKFQVHG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C +AIA+SS++TE +GK+L+E I + D+A + LP VK+HCS L A+ AI +Y Sbjct: 58 CPAAIATSSILTEMARGKTLEEGLRITDADVAAAIGGLPEVKLHCSNLGASALHDAIRNY 117 Query: 122 KSKREA 127 ++K +A Sbjct: 118 QAKMQA 123 >UniRef50_A4J289 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J289_DESRM Length = 163 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 +AYSEK +DH+ NPRNVG +N + G G +G CGDV ++ I V +E I D +F+ Sbjct: 13 LAYSEKTLDHFRNPRNVGVVENYN---GRGKIGEADCGDVCEITILVEEEQI-NDIKFRV 68 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIA 119 YGC A+A+SS VTE KGK +EA + + D+ E L+ LP K HCS+L A+K AI Sbjct: 69 YGCVGAVATSSAVTELAKGKHCEEALKLTDDDVVEFLDGLPDQKKHCSLLGIRALKQAIY 128 Query: 120 DY 121 DY Sbjct: 129 DY 130 >UniRef50_B5IVA4 NifU-like N terminal domain protein n=1 Tax=Thermococcus barophilus MP RepID=B5IVA4_9EURY Length = 216 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 87/122 (71%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + YS KV+ ++ +P+NVG +N + G+PACGD++KL +K+ ++ I+ DA+F++ Sbjct: 15 IGYSRKVLYYFLHPKNVGEIENPSV---TAKAGSPACGDMIKLYLKIENDKIV-DAKFRS 70 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 YGC + IA++S++TE + GK+++EA+ IK DI EEL LP +K HC++LA + +K A+A Sbjct: 71 YGCAANIATASVLTEMIIGKTVEEAKKIKFKDIVEELGGLPQIKYHCAVLAAEGLKQALA 130 Query: 120 DY 121 + Sbjct: 131 KW 132 >UniRef50_Q39WZ1 Fe-S cluster assembly protein NifU n=33 Tax=cellular organisms RepID=Q39WZ1_GEOMG Length = 286 Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/123 (52%), Positives = 89/123 (72%), Gaps = 7/123 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND--EGIIEDARFKT 60 Y+EKV +H+ NPRNVG + D G VG+ ACGD +KL IK++D E I+ DA+F+T Sbjct: 4 YTEKVREHFLNPRNVGDIPDAD---AVGEVGSLACGDALKLYIKLDDAKERIV-DAKFQT 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 +GC SAIASSS +TE +KGK+LDEA A N +IA+ L LP K+HCS++ ++A++ AIA Sbjct: 60 FGCASAIASSSALTEIIKGKTLDEALATTNQEIADFLGGLPEEKMHCSVMGQEALEVAIA 119 Query: 120 DYK 122 Y+ Sbjct: 120 KYR 122 >UniRef50_O09257 NifU n=13 Tax=Bacteria RepID=O09257_CYAP8 Length = 294 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/124 (46%), Positives = 89/124 (71%), Gaps = 4/124 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN--VGSGMVGAPACGDVMKLQIKVND-EGIIEDARFK 59 Y++KV++ + NPRN G+ E + +G VG+ ACGD K+ +K+++ II DARF+ Sbjct: 4 YTDKVMEFFYNPRNQGTITEKQEGQAITTGEVGSIACGDSPKIHLKIDEATQIILDARFQ 63 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAI 118 T+GC SAIASSS +TE + GK+LDEA ++ N +IAE L LP K+HCS++ ++A++AAI Sbjct: 64 TFGCASAIASSSALTELLVGKTLDEALSLTNREIAEFLGGLPEEKMHCSVMGQEALEAAI 123 Query: 119 ADYK 122 +Y+ Sbjct: 124 FNYR 127 >UniRef50_A5FQV7 Nitrogen-fixing NifU domain protein n=5 Tax=Dehalococcoides RepID=A5FQV7_DEHSB Length = 127 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y EKV++++ NP N G +N D G G G CG+V + I+V D ++E +FKTYG Sbjct: 4 YFEKVMEYFVNPLNSGEMENPD---GIGRAGNAVCGEVTEFYIRVKDNRLVE-VKFKTYG 59 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG+A+A SSLV+ GK+++EA I N + E++ LP + HCS + A+ +AIADY Sbjct: 60 CGAAVAISSLVSLMATGKTIEEAMKIDNKAVEAEIKGLPQNRNHCSQMGPQALHSAIADY 119 Query: 122 KSKREAK 128 K K +A+ Sbjct: 120 KIKVQAR 126 >UniRef50_B9L9A8 NifU family protein n=6 Tax=Epsilonproteobacteria RepID=B9L9A8_NAUPA Length = 321 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 80/135 (59%), Gaps = 13/135 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNND-ENVGSGMV----GAPACGDVMKLQIKVNDEG-IIEDA 56 YS KVID NP+ +G F D + G +V G+ ACGD ++L V+ + I DA Sbjct: 15 YSNKVIDRMNNPKYLGEFTEEDAKKRGLKLVVADFGSEACGDAVRLYWLVDPKTDKIVDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-------LPPVKIHCSIL 109 RFK++GCG+AIASS ++TE GK++DEA I N D+ + L PP K+HCS++ Sbjct: 75 RFKSFGCGTAIASSDMMTELTIGKTVDEAMKITNLDVEKALRDDPNTPAFPPQKMHCSVM 134 Query: 110 AEDAIKAAIADYKSK 124 A D I A A YK K Sbjct: 135 AYDVIIEAAAKYKGK 149 >UniRef50_A0RRI4 Nitrogen fixation protein NifU n=55 Tax=cellular organisms RepID=A0RRI4_CAMFF Length = 333 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 13/133 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN-VGSGMV----GAPACGDVMKLQIKV-NDEGIIEDA 56 YS+KV D +P+N+G N +G ++ GA +CGD ++L V + II+DA Sbjct: 15 YSQKVQDAMNHPKNMGEITEEQANAMGCELIIADHGAESCGDAVRLYWAVEKNTDIIKDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-------LPPVKIHCSIL 109 +FK++GCG+AIASS + E KGK++DEA I N D+ + + +PP K+HCS++ Sbjct: 75 KFKSFGCGTAIASSDYMAELCKGKTVDEAVKITNIDVEKAMRDDPEIPAVPPQKMHCSVM 134 Query: 110 AEDAIKAAIADYK 122 A D IKAA A YK Sbjct: 135 AYDVIKAAAASYK 147 >UniRef50_Q74DA8 NifU-like domain protein n=1 Tax=Geobacter sulfurreducens RepID=Q74DA8_GEOSL Length = 131 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS KV DH NPRNVGS ++ + V +G P CGD + +++ +E I+ D +F G Sbjct: 5 YSAKVWDHVRNPRNVGSLEDANVVVQAG---DPTCGDAVLYFLRI-EEDIVRDIKFLIKG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG+AIA+SS+ TE V GK LDE + + IA+ L+ LP K+HCS +A A+ AA+ Y Sbjct: 61 CGAAIATSSVATELVMGKGLDEVMGLSDQIIAQALDGLPEEKMHCSNMAASALHAAVEQY 120 Query: 122 KS 123 ++ Sbjct: 121 RA 122 >UniRef50_B3E6H1 Nitrogen-fixing NifU domain protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E6H1_GEOLS Length = 153 Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ V+DH NPRNVG D+ + V VG P CGD + L +++ D+G + F G Sbjct: 8 YTGTVLDHARNPRNVGGMDDANVVV---QVGDPECGDTLLLFMRI-DDGCVAKVSFLIKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 CG+AIA++S+ TE VKGKSL+EA + + + L LP K HCS L A+ AAIA Y Sbjct: 64 CGAAIATASMGTELVKGKSLNEALLVTDATVTAALGGLPEDKEHCSNLIASAVHAAIAQY 123 Query: 122 KS 123 S Sbjct: 124 TS 125 >UniRef50_A1AQD6 Nitrogen-fixing NifU domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQD6_PELPD Length = 133 Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS KV DH+ PRN G ++ + G G +G P CGD +K+ +K+ D+ I++D +F+ G Sbjct: 6 YSPKVFDHFLTPRNNGVLEDAN---GIGEIGDPECGDHLKVYVKIEDD-IVKDIKFQIKG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 C +AIA +S +TE V GK + EA + + I E ++ LP K+HCS L + A+ DY Sbjct: 62 CPAAIACASAMTELVMGKPVGEAMLVSDDQIIEYIDGLPEFKVHCSALGASGFRVAVMDY 121 Query: 122 KSKRE 126 K + Sbjct: 122 SIKSK 126 >UniRef50_B9XEV1 Nitrogen-fixing NifU domain protein n=2 Tax=Verrucomicrobia RepID=B9XEV1_9BACT Length = 167 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 78/118 (66%), Gaps = 7/118 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG---IIEDARFKTY 61 +++ + NP+N+G N D G VG CG++++L +K D+ +I+ A F+++ Sbjct: 7 KRIREAMLNPQNMGELANAD---SVGTVGNSDCGEMLRLWVKFKDDNGRKVIDKATFQSF 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAI 118 GC +AIA +SL TE ++GK+ +EA A+K D+A EL LPP+KIHC+ L E A+++A+ Sbjct: 64 GCETAIAVASLATELIRGKTAEEALALKTEDLAGELGPLPPMKIHCAQLVEGALRSAL 121 >UniRef50_D1JBD9 Putative NifU-like protein n=2 Tax=uncultured archaeon RepID=D1JBD9_9ARCH Length = 141 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 6/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE+ ++ NP+NVG ++ D G G + P CGD M++ +K+ D I+ D +F + G Sbjct: 24 YSERTLEEAYNPKNVGVLEDPD---GCGRITGP-CGDTMQIHLKIADAKIV-DCKFISDG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG + AS S VTE KGK++++A I I L+ LP IHC +LA + ++AAI DY Sbjct: 79 CGPSTASGSAVTEMAKGKTIEDALMIDANAILAVLDGLPEESIHCPVLAVNTLRAAIEDY 138 Query: 122 KSK 124 K+K Sbjct: 139 KNK 141 >UniRef50_A8PKG9 NifU-like protein, putative n=1 Tax=Brugia malayi RepID=A8PKG9_BRUMA Length = 79 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 37/59 (62%), Positives = 53/59 (89%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFK 59 ++YSEK++DHYENP+NVGS D ND +VG+G++GAP+CG+V++LQI VND+ +IED +FK Sbjct: 8 ISYSEKILDHYENPKNVGSLDKNDPSVGTGLIGAPSCGNVIELQINVNDKDVIEDEKFK 66 >UniRef50_UPI0001746083 putative FeS assembly protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746083 Length = 166 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 76/118 (64%), Gaps = 7/118 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE---GIIEDARFKTY 61 E + D NP+NVG + D G VG+P CGD++++ IK ++ +I+ A F+++ Sbjct: 4 EVLQDALANPQNVGEIPDAD---AVGTVGSPDCGDMVRMWIKYKEQDGKKVIDKATFQSF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAI 118 GC +AIA +SL T+ +KGK+ +EA + ++++ L LPP+KIHC + E A+KAA+ Sbjct: 61 GCQTAIAVASLATQLIKGKTREEALDLSAEELSKPLGPLPPMKIHCGQMVEGALKAAL 118 >UniRef50_D1CFT0 Nitrogen-fixing NifU domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFT0_THET1 Length = 134 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 76/124 (61%), Gaps = 6/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTY 61 Y++ IDHY +PRNVG + G+G G G +M +QI + +IED RF+ + Sbjct: 11 YTDITIDHYLHPRNVGIIPDA---TGAGTAGDQEKGQIM-IQITLRCSNRVIEDIRFRAF 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GC + IAS+S+VTE KGK+L+EA+AI + + E L LP K++C+ A +A+ AI D Sbjct: 67 GCSATIASASMVTELAKGKTLEEAEAITSHVLLEALGGLPQDKLYCADYATEALHIAIKD 126 Query: 121 YKSK 124 S+ Sbjct: 127 AISR 130 >UniRef50_Q023P2 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023P2_SOLUE Length = 118 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 5/115 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E+++DH++NPRNVG + V V PACGD+++L + EG I +A +K G Sbjct: 2 YPERLLDHFQNPRNVGELPSPAITV---EVSNPACGDILRLS-ALFTEGRIAEASYKVRG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKA 116 C ++IA+ S +TEW+ GK+ DE T I E + LP H ++L D +KA Sbjct: 58 CTASIAAGSALTEWLAGKTRDELSRFTATLIDEAVGGLPTASKHAAVLCADGVKA 112 >UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=MNMA_RUBXD Length = 488 Score = 85.5 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +VI+H NPRN G G G G ACGD ++ ++V + +++ R++ YG Sbjct: 5 YGPRVIEHLVNPRNAGEVGGPS---GVGEAGNAACGDQVRFTLRVGGDLRLQEVRYRAYG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAIAD 120 C + IA+ S + E +G+S+ A I DI E L LPP K H + LA DA+ A D Sbjct: 62 CAACIAAGSALAELAEGRSITGAAQISRGDIQEALGGPLPPGKEHGATLALDALHRAFED 121 Query: 121 YKSKR 125 Y S++ Sbjct: 122 YWSRQ 126 >UniRef50_D1JAT5 NifU-like protein n=2 Tax=uncultured archaeon RepID=D1JAT5_9ARCH Length = 129 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 8/122 (6%) Query: 3 YSEKVIDHYENPRNVGSF-DNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEK I++Y N NVG D N + + +G CGD M++ + V D G I++A+F+ Sbjct: 13 YSEKAIEYYLNKVNVGELSDANSQAIYTG-----PCGDTMEIFLNVED-GEIKEAKFQAI 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GC A +S S +TE + GK+L+EA+ I TDI L +P K+HC+ L + ++ AI Sbjct: 67 GCAGAFSSGSALTEMIIGKTLEEAEKIDETDIMAYLGGIPAQKLHCACLCKRTLRKAIDA 126 Query: 121 YK 122 YK Sbjct: 127 YK 128 >UniRef50_D1C3Z4 SUF system FeS assembly protein, NifU family n=2 Tax=cellular organisms RepID=D1C3Z4_SPHTD Length = 127 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DHY NPRN G+ +N D + P CGD +++ +++ D I+E +F G Sbjct: 5 YRENILDHYRNPRNYGTIENADISYEDS---NPLCGDRVRIDMRIEDGKIVE-IKFSGRG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAA 117 C + AS+S++TE V+G LDE + + DI +EL +P P ++ C++L +K+A Sbjct: 61 CAISQASASMLTEMVEGADLDEIRELSAQDILDELGVPISPARVKCALLGLKVLKSA 117 >UniRef50_Q07HZ2 Nitrogen-fixing NifU domain protein n=7 Tax=Rhodopseudomonas palustris RepID=Q07HZ2_RHOP5 Length = 339 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/126 (42%), Positives = 80/126 (63%), Gaps = 5/126 (3%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYG 62 +++ +H+ NP+NVG E G VGA GD +KL ++++ IE ARF+TYG Sbjct: 8 TDRFGEHFANPKNVGVLA---EANAVGSVGALDYGDAVKLMLRIDPATDRIEQARFQTYG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C SAIA+SS +TE + GKS+DEA I D+AE L LP +++CS++ +A++ AIA Y Sbjct: 65 CSSAIAASSAITEMIIGKSIDEALEISAADVAEFLGGLPDERMYCSVMTYEAVQKAIAAY 124 Query: 122 KSKREA 127 + EA Sbjct: 125 RHPEEA 130 >UniRef50_Q3A8K8 NifU-like protein n=3 Tax=Desulfuromonadales RepID=Q3A8K8_PELCD Length = 143 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 5/120 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS++V++H+ PRNVG DN + G P CGD + + + + +E +I D ++K G Sbjct: 2 YSKQVMEHFTRPRNVGYIDNPSVAI---QYGDPTCGDCLLVFLLI-EEDVIRDMKYKVLG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C +AIA++S+ +E G++L++A + ++A L LPP K+HCS LA A+KAA+ Y Sbjct: 58 CAAAIATASITSEMAIGRTLEQAMELTEKEVAVALGGLPPQKMHCSNLAVGALKAALRVY 117 >UniRef50_A8DR52 NifU n=1 Tax=uncultured bacterium RepID=A8DR52_9BACT Length = 311 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 18/138 (13%) Query: 3 YSEKVIDHY------ENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN------DE 50 YS+KV+ + E ++G +N D G G G+ CGD ++ +V Sbjct: 5 YSDKVLKLFMDAVKGETGTHMGELENPD---GFGEHGSIVCGDTLRFTFRVERHLTDPTR 61 Query: 51 GIIEDARFKTYGCGSAIASSSLVTEWV--KGKSLDEAQAIKNTDIAEELE-LPPVKIHCS 107 II AR+ T+GC SAIA+S + + +GK+ EA + N D+ + L+ LP KIHCS Sbjct: 62 DIITQARYLTFGCTSAIAASEALCTLLEEQGKTPIEALQVSNQDLIDFLDGLPEQKIHCS 121 Query: 108 ILAEDAIKAAIADYKSKR 125 ++ +A++ A+AD+ SKR Sbjct: 122 VMGAEALQKAVADWASKR 139 >UniRef50_A1AQB7 Nitrogen-fixing NifU domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQB7_PELPD Length = 156 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 5/120 (4%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E +DH NPRNVG ++ + + +G P C D + +++ +E ++ + +F GC Sbjct: 4 ETFLDHARNPRNVGLLEDANVVIQAG---DPECSDKLIFFVRI-EEDLVRNIKFLIEGCE 59 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADYKS 123 + +A+SS +T V G+SLD A+ DIA L+ LP K+HC +A A+ AA+ Y++ Sbjct: 60 TTVATSSALTGLVMGQSLDVVLALDTEDIAAVLDGLPVEKMHCPTMAISALHAAVRLYRA 119 >UniRef50_B5JY19 FeS cluster assembly scaffold IscU n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY19_9GAMM Length = 122 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Query: 10 HYENPRNVGSFDNNDENVGSGMVGAPACGD-VMKLQIKVNDEGIIEDARFKTYGCGSAIA 68 H++ PRNVG D+ E VGS G G+ +++Q+ V D IE FK YG G+ IA Sbjct: 3 HFDQPRNVGELDDTQEGVGSACAGDAHRGEHQLRIQLYVGDSDCIEKTAFKAYGSGAVIA 62 Query: 69 SSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREA 127 S S TEW KGK+L + + + E L+L + ++ A+ A D + K+ A Sbjct: 63 SCSFATEWAKGKTLAQLSDLDAVALCEALQLEDSERGLAVQVCQALNRAGDDIEQKQNA 121 >UniRef50_Q98AM0 Nitrogen fixation protein; NifU n=2 Tax=Mesorhizobium loti RepID=Q98AM0_RHILO Length = 153 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 78/130 (60%), Gaps = 10/130 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 +S+K+ ++ NP NVG D + +G VGA ACGD +KL + + + I A F+T+ Sbjct: 11 FSDKL--YFINPHNVGVLDIPN---AAGEVGAVACGDGLKLMMGFDPKTETITAATFQTF 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCS---ILAEDAIKAA 117 G GSAI +SS +T+++ GK++DEA I + ++A+ L LPP I+ S ++ E ++ Sbjct: 66 GRGSAITASSTITQFIVGKTIDEALQITDQEMADFLGALPPHTIYSSLDRLILERGLRLM 125 Query: 118 IADYKSKREA 127 + + R+A Sbjct: 126 SEFFHAVRQA 135 >UniRef50_B3T2T4 Putative NifU-like N terminal domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93H17 RepID=B3T2T4_9ARCH Length = 149 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 20/130 (15%) Query: 3 YSEKVIDHYENPRNVGSFDN-----NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDAR 57 Y+E +I++ NP N G +N +D N P CGD + L + V+ I E + Sbjct: 7 YTEMIIEYSRNPSNFGKIENPHIHRHDSN--------PLCGDSIDLYVNVDGNKITE-VK 57 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELEL------PPVKIHCSILAE 111 F GC +A +S++TE +KGK+L+E + K D+ EL L PV+I C++L+ Sbjct: 58 FDGKGCAICMACTSVLTEMIKGKNLEEVKNFKKDDLLSELGLGHLIKTSPVRIKCALLSL 117 Query: 112 DAIKAAIADY 121 A+K I Y Sbjct: 118 KALKYGIYSY 127 >UniRef50_A0LFU2 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFU2_SYNFM Length = 144 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 6/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS K I + ++G+ + D S M G CGD M + +KV D G+I D +++ G Sbjct: 25 YSRKAIRLFIEKPHMGTIPDADHV--SEMTGT--CGDTMSVCLKVQD-GVIRDLKYQVLG 79 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C A+AS+ E +KGK+++EA+++ + DI L E+P K HC LA +K A+ +Y Sbjct: 80 CPGAVASAMAAVELIKGKTIEEARSLNDGDIFRLLEEIPAQKHHCIQLAVKTLKKALDEY 139 Query: 122 KSK 124 K Sbjct: 140 ARK 142 >UniRef50_C7NMT9 SUF system FeS assembly protein, NifU family n=7 Tax=Halobacteriaceae RepID=C7NMT9_HALUD Length = 163 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 72/117 (61%), Gaps = 16/117 (13%) Query: 3 YSEKVIDHYENPRNVG-----SFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDA 56 Y ++++DHY+NPRN G +F + EN P CGD +++ + ++D E IE Sbjct: 26 YRQQILDHYKNPRNYGEIEGATFTHVGEN--------PMCGDTIEMDVVLDDDEETIEAV 77 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAE 111 F+ GC + AS+S+++E ++G +++E +A+ D+ + L ++ P+++ C++LAE Sbjct: 78 AFQGDGCAISQASASMLSERLEGMTIEELEALDRDDVIDMLGVDISPMRVKCAVLAE 134 >UniRef50_Q1IN98 Nitrogen-fixing NifU-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IN98_ACIBL Length = 120 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 5/112 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS +++DH+ENPR G V + PACGD+++L +++ EG++ + RF+ G Sbjct: 2 YSARLLDHFENPRYAGELPGATAKV---RIENPACGDILELAAEIH-EGVVREIRFRAKG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDA 113 C A+A S + ++G+S+ + I+ D+ E+E +P H LA DA Sbjct: 58 CVPAMACGSAIATLIQGQSVAQLLKIRREDVLREVESVPQASGHAVHLALDA 109 >UniRef50_B0R7Y3 Iron-sulfur cluster assembly protein n=5 Tax=Halobacteriaceae RepID=B0R7Y3_HALS3 Length = 142 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 16/121 (13%) Query: 3 YSEKVIDHYENPRNVG-----SFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDA 56 Y ++++DHY NPRN G SF + N P+CGD ++ + ++D+G I Sbjct: 8 YRQQILDHYRNPRNQGELPEPSFTHEGYN--------PSCGDELEFDVALDDDGETIAHV 59 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAI 114 F+ GC + AS+S+++E + G +L E A+ DI + L E+ P++I C++L+E + Sbjct: 60 AFRGDGCAISQASASMLSEELPGMTLAEVDALDRDDILDMLGVEVTPMRIKCAVLSEKVV 119 Query: 115 K 115 + Sbjct: 120 Q 120 >UniRef50_C7DI52 SUF system FeS assembly protein, NifU family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI52_9EURY Length = 124 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E++I +YE+P N G DN D + P CGD + + IKV+D + ++ +F+ G Sbjct: 6 YAEELISNYEHPHNKGKIDNPDAEMHEY---NPVCGDDITIYIKVSDNKV-KEVKFEGQG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAIAD 120 C ++ ++S++TE +KGKSL E A+ DI E + + P ++ C+ ++ A++ A+ Sbjct: 62 CAISMGTASMLTESIKGKSLSEISAMGFKDIVELIGVDPGPARLKCATISLKALQKAVQK 121 Query: 121 YK 122 K Sbjct: 122 IK 123 >UniRef50_B1ML97 Similarity with Nitrogen-fixing NifU-like proteins n=2 Tax=Mycobacterium RepID=B1ML97_MYCA9 Length = 133 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 +S VIDH+ NPRN G D D + +G P CGD + L ++ DE ++ F+ YG Sbjct: 4 FSPAVIDHFTNPRNAGRLDQADV---TAFIGNPVCGDQILLSAQIRDE-VVSRIGFEAYG 59 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADY 121 C +++A +S++TE + G + + + I+ + E L P + H + L D + +Y Sbjct: 60 CSASLAVASILTERLSGMPVRDIETIQAAQVIEWSGGLSPEQQHVAALGADVAQRLANNY 119 Query: 122 KS 123 ++ Sbjct: 120 RN 121 >UniRef50_Q0YR11 Nitrogen-fixing NifU-like:BFD-like (2Fe-2S)-binding region n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR11_9CHLB Length = 161 Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%) Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAA 117 +TYGC SAIAS+S+++E VKG++LD+A I ++A EL LP KIHCS+L + A++AA Sbjct: 24 ETYGCASAIASTSVLSEMVKGRTLDQAFNISPKEVALELGGLPDNKIHCSVLGDKALRAA 83 Query: 118 IADYKSK 124 I DY ++ Sbjct: 84 INDYYTR 90 >UniRef50_A5UR74 SUF system FeS assembly protein, NifU family n=6 Tax=Chloroflexi (class) RepID=A5UR74_ROSS1 Length = 132 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 8/120 (6%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E +++HY++PR G D+ D S P CGD +++ +++ + GII DARF G Sbjct: 5 YRELILEHYKHPRRRGRIDHPDV---SAEEHNPLCGDRVRIDLRIEN-GIITDARFDGRG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP----PVKIHCSILAEDAIKAAI 118 C + AS+S++TE + G +++A+ + + +P PV+I C++L +K + Sbjct: 61 CAISQASASMLTEEIVGMPVEQAKQFSKDQMLALIGIPLNHNPVRIKCALLPLKTLKVGL 120 >UniRef50_C8X380 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X380_DESRD Length = 143 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 6/118 (5%) Query: 11 YENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 + NP +VG+F D VG + G CGD ++++I V EG I +ARF T GCG +I S Sbjct: 31 WRNPIHVGTFSQPD-GVGD-LTGE--CGDSIQIEILVR-EGRIHEARFWTDGCGPSIVSG 85 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADYKSKREA 127 + E GKSL+EA +++ +I E L LP K HC+ LA ++ A+ Y R+ Sbjct: 86 CVACELACGKSLEEAASLQAGEILEYLGGLPEDKEHCAHLAARTLQEAVDAYMRSRQG 143 >UniRef50_C6C1H8 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H8_DESAD Length = 141 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 6/121 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 K + NP + +N D +G V CGDV+K+ +K+ D + +A F T GCG Sbjct: 26 KETSRWHNPTYARTMENPDS---TGEVRG-NCGDVIKIFLKI-DNNTVSEASFFTTGCGP 80 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADYKSK 124 +I SS +V E GK++D A I DI E L LP K HC+ LA A++ A+ ++ K Sbjct: 81 SIVSSDMVCELCMGKNIDAASEIDGEDILERLGGLPEDKTHCAHLASSAMQEALGNWMEK 140 Query: 125 R 125 + Sbjct: 141 K 141 >UniRef50_C7I512 SUF system FeS assembly protein, NifU family n=1 Tax=Thiomonas intermedia K12 RepID=C7I512_THIIN Length = 165 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E + DHY PR+ G + P CGD ++L++ V+D G I+D F G Sbjct: 17 YQEVIFDHYRRPRHFGHLPQPNR---CAQGDNPLCGDRLELELFVDDAGCIQDVAFTGEG 73 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI 88 C + AS+SL+TE VKGK +DEA + Sbjct: 74 CAISTASASLLTEAVKGKRVDEALTL 99 >UniRef50_B8FAZ4 Nitrogen-fixing NifU domain protein n=2 Tax=Desulfobacteraceae RepID=B8FAZ4_DESAA Length = 146 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 6/122 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS+K I +Y + +G + + N + + G CGD MK+ +K+ D+ I +DA+ + Sbjct: 22 GYSDKAIQYYVERKGMGKLE--EANQITELTGP--CGDTMKVFLKIEDDKI-QDAKIQVL 76 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GC AI+S+ + + KGK+L+EA+ I I +ELE +P K HC L ++ AI + Sbjct: 77 GCPGAISSAMVAMDMAKGKTLEEAKTITEGVIFKELENIPDQKQHCIQLTVKTLQNAIEE 136 Query: 121 YK 122 Y+ Sbjct: 137 YQ 138 >UniRef50_A5D4Q3 NifU homolog n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4Q3_PELTS Length = 150 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 44/98 (44%), Positives = 54/98 (55%), Gaps = 11/98 (11%) Query: 3 YSEKVIDHYENPRNVGSFDNND---ENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFK 59 YS+ VIDH NPRNVG+ N D + G CGD M + +KV D I +A F Sbjct: 17 YSDTVIDHARNPRNVGNIPNCDGFSQETGE-------CGDTMAIWLKVIDNKI-NNATFW 68 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97 T GCG+ IA S+VTE K S++EA IK DI L Sbjct: 69 TDGCGTTIACGSMVTEMAKNLSVEEALKIKAEDILNAL 106 >UniRef50_C6MSR1 Nitrogen-fixing NifU domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MSR1_9DELT Length = 139 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 +S K+ DH NPRN G + D V G P GD + +K+ E ++ DARF G Sbjct: 5 FSTKIWDHARNPRNRGFLKDADVLV---QAGDPDKGDALLYLLKIEAEQVL-DARFLARG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 +A+A+SS+ TE GKSLDE AI++ IA L LP K+HC +A A+ AA+ Y Sbjct: 61 SATAVAASSVATELAIGKSLDEVLAIRHGAIAAALGGLPEDKMHCCQMAVSALHAAVQQY 120 Query: 122 KSKRE 126 + E Sbjct: 121 RGTAE 125 >UniRef50_A7NG60 SUF system FeS assembly protein, NifU family n=2 Tax=Roseiflexus RepID=A7NG60_ROSCS Length = 134 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 5/119 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 +++DHYE+PRN GS + D G+ P CGDV+ + +K++ + F+ GC Sbjct: 9 RLLDHYEHPRNRGSLPDADVTQTGGI---PDCGDVVTVYLKIDPPDRVVAISFEGQGCTI 65 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAIADYK 122 + A++S+++E V G + E +AI ++ + L E + C+ LA +KAAIA Y+ Sbjct: 66 SQAAASILSERVIGSTFAEIEAITLDEMIDFLGREAVQTRPRCATLALRTLKAAIAAYR 124 >UniRef50_A9KE69 IscU n=6 Tax=Coxiella burnetii RepID=A9KE69_COXBN Length = 119 Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS++V+ ++ + G D +D +V G + G + +L ++ ++ II +A+F+ Sbjct: 1 MQYSKEVLHYFFENVHAGELDKDDPHVRYGEIATSTEGHLFRLYLRCQND-IITEAKFQA 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAI 118 YG A A+ V W +GK+ DEA + + I + L L +++H ++L E K + Sbjct: 60 YGSVVATAACEYVCRWAEGKTFDEANHLDSDQIQKALNLSSLQVHAALLIERLWKKTL 117 >UniRef50_Q0F1C8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1C8_9PROT Length = 151 Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 26/140 (18%) Query: 3 YSEKVIDHYENPRNVGSFDN-NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DH ++PRN G + N E G P CGD + + + V+D+GIIED F+ Sbjct: 8 YQQVIVDHNKSPRNFGKLASFNHEADGYN----PLCGDKLHIYLNVSDDGIIEDVSFEGE 63 Query: 62 GCGSAIASSSLVTEWVKGKSL-------DEAQAIKNTDIAEELELP-------------- 100 GC ++AS+SL+T+ +KG L + Q + DI EE + Sbjct: 64 GCAISVASASLMTDALKGTELAAFQQRFEGFQHMVTADIDEEPDTDVLGKLAVLSGVREF 123 Query: 101 PVKIHCSILAEDAIKAAIAD 120 P +I C+ L +KAAI D Sbjct: 124 PSRIKCASLCWHTMKAAIED 143 >UniRef50_B2GCP7 Nitrogen fixation protein n=69 Tax=Bacilli RepID=B2GCP7_LACF3 Length = 156 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH ++P N G+ + + + P CGD + LQ+KV +G+I++ + +G Sbjct: 10 YREVILDHADHPHNKGALKDATNAI---TLNNPTCGDEIDLQVKVGSDGLIDEIGYTGHG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEA---------------------QAIKNTDIAEELELPP 101 C + AS+S++TE VKGK DEA QA+ + + + P Sbjct: 67 CTISQASASMMTEAVKGKRPDEALAMAKIFSDMAIGKDHDQADLQALGDAQVLTSIMEFP 126 Query: 102 VKIHCSILAEDAIKAAI 118 +I C+ LA A++ A+ Sbjct: 127 ARIKCATLAWWALQRAL 143 >UniRef50_O32163 NifU-like protein n=159 Tax=Bacillales RepID=NIFU_BACSU Length = 147 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 24/136 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DHY+NPRN G ND V + P CGD ++L +K+ D I+EDA+F+ G Sbjct: 11 YRQVIMDHYKNPRNKGVL--NDSIVVD--MNNPTCGDRIRLTMKL-DGDIVEDAKFEGEG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELP-----------------PVK 103 C ++AS+S++T+ +KGK ++ A ++ +D+ + E P + Sbjct: 66 CSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPAR 125 Query: 104 IHCSILAEDAIKAAIA 119 I C+ L+ A++ +A Sbjct: 126 IKCATLSWKALEKGVA 141 >UniRef50_B8CH94 FeS assembly protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH94_SHEPW Length = 122 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 73/119 (61%), Gaps = 6/119 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++ +ID++ NP+ VG ++ D +G P CGD + +Q+ + + I E + F+ +G Sbjct: 2 YNDIIIDNFSNPKFVGDLESADYKFE---IGNPVCGDRIHMQVSFDGDNIRE-SSFRAWG 57 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHC-SILAEDAIKAAIA 119 C +++A++++ + + GKS+DE + +I++ L EL P + HC +IL+E + A+A Sbjct: 58 CATSVATANIFCDSIIGKSIDEISMRQADEISDMLGELEPSQQHCINILSELHRELALA 116 >UniRef50_B6BSS9 SUF system FeS assembly protein, NifU family n=3 Tax=Candidatus Pelagibacter RepID=B6BSS9_9RICK Length = 154 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 56/86 (65%), Gaps = 3/86 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E +++H +NPRN+G D+ +++ P CGD + + +K+N + I+ED F+ G Sbjct: 7 YQEIILEHGKNPRNLGKTDDFNKDAKGH---NPLCGDNVHVYLKLNGQKIVEDISFEGSG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI 88 C ++AS+S++T+ +KGK+ EA+ I Sbjct: 64 CAISMASASIMTDLIKGKNEHEAKEI 89 >UniRef50_A9A1A8 SUF system FeS assembly protein, NifU family n=4 Tax=cellular organisms RepID=A9A1A8_NITMS Length = 147 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 7/126 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++D+ NP N G +++D P CGD + + +K++D+ + D +F G Sbjct: 8 YHEMIVDYSRNPVNYGEIEDHDVTFHDA---NPLCGDSIDIDMKIDDDKVT-DIKFHGKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL---ELPPVKIHCSILAEDAIKAAIA 119 C +A SS++TE KGKSL++ + I+ D+ EL L V+I C++L+ +K+A+ Sbjct: 64 CAICMACSSVLTEITKGKSLEDVKNIEKNDVLSELGLEHLQAVRIKCALLSLKVLKSALY 123 Query: 120 DYKSKR 125 Y +K Sbjct: 124 TYLAKH 129 >UniRef50_B8HK33 SUF system FeS assembly protein, NifU family n=2 Tax=Chroococcales RepID=B8HK33_CYAP4 Length = 165 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 23/137 (16%) Query: 3 YSEKVIDHYENPRNVGSFDN-NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +++HY+ PR+ G + + G P+CGD ++L +++++ G I D +F+ Sbjct: 10 YQQVILEHYKKPRHRGKTNPVHRHQRGHN----PSCGDTIELTVQLDETGRIADIKFEGE 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIK---NTDIAEELELP---------------PVK 103 GC A++S+ L+ + +GK++ EA A+ T + E E P PV+ Sbjct: 66 GCAIALSSADLMADAARGKTIPEALAMVQQFQTMMKGEGEFPKDLRKLNVMQGVAQFPVR 125 Query: 104 IHCSILAEDAIKAAIAD 120 I C+ L ++AA+ D Sbjct: 126 IKCATLTWHTLRAALED 142 >UniRef50_C3RKP2 SUF system FeS cluster assembly protein n=6 Tax=Bacteria RepID=C3RKP2_9MOLU Length = 142 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M + ++DHYENPRN G D D+N S + + C D + +Q + D G+I+D RF Sbjct: 7 MMLRQIIMDHYENPRNHGLVD--DDNYQSVNMDSETCIDDIDVQALIED-GVIKDIRFDG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAI 88 C AS+S+++E + GK++DEA I Sbjct: 64 EACAICTASTSIMSELLIGKTIDEANVI 91 >UniRef50_C1ZK76 Iron-sulfur cluster biosynthesis protein, NifU-like protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK76_PLALI Length = 142 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 16/123 (13%) Query: 3 YSEKVIDHYENPRNVGSFD-----NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDAR 57 Y + ++DH+E+P + G + + D+N P CGD +KL++K+ D IE+A Sbjct: 9 YDDYILDHFESPYHCGKLECPSCAHADKN--------PLCGDQIKLELKL-DGSTIEEAW 59 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV--KIHCSILAEDAIK 115 F+ GC + A +S++ E ++GK+L+E + ++ D+ + L++P + C +LA +K Sbjct: 60 FQGRGCAISQAGASILCEHIEGKTLEELRDMQGQDMLDLLKVPLTASRQKCGLLAFRVLK 119 Query: 116 AAI 118 + Sbjct: 120 TLV 122 >UniRef50_B4D357 SUF system FeS assembly protein, NifU family n=4 Tax=Bacteria RepID=B4D357_9BACT Length = 154 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 22/135 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH PRNVG + +V P+CGD + L +K +G IED +F G Sbjct: 9 YQQVILDHSRRPRNVGEIADGAVHVHGD---NPSCGDEIHLHVKFGADGGIEDLKFTGQG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA-------IKNTDIAE------ELELP------PVK 103 C + AS+SL+T VKGKS +A A + T++++ +L L P + Sbjct: 66 CAISQASASLMTLKVKGKSRADAGAMLSAFHDLVTTEVSDPPKSLGDLRLLQGVRKFPQR 125 Query: 104 IHCSILAEDAIKAAI 118 + C++LA A++ A+ Sbjct: 126 VKCAMLAWRALEQAM 140 >UniRef50_B6IR40 SUF system FeS assembly protein, NifU family n=2 Tax=Proteobacteria RepID=B6IR40_RHOCS Length = 160 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 9/89 (10%) Query: 3 YSEKVIDHYENPRNVG---SFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFK 59 Y E ++DH +PRN G +F+ P CGD + + + V+D+G+I DA F Sbjct: 9 YQEVILDHGRHPRNFGRPATFNRTARG------DNPMCGDKITIYLTVSDDGVITDAGFD 62 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAI 88 GC + AS+SL+TE +KG+ + EA+A+ Sbjct: 63 GRGCAISQASASLMTEILKGRPVAEAEAL 91 >UniRef50_Q2JCF1 SUF system FeS assembly protein n=86 Tax=Actinobacteria (class) RepID=Q2JCF1_FRASC Length = 172 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 4/92 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DHY NP + G D D V P CGD + L++KV+D G++ED +++ G Sbjct: 7 YQEIILDHYRNPLHRGLRDPFDAEVHHV---NPTCGDEVTLRVKVSD-GVVEDVSYESEG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA 94 C + AS+S++++ V GKS+D A ++ +A Sbjct: 63 CSISQASASVMSDLVIGKSVDAALKLEREFLA 94 >UniRef50_Q1JIL3 IscU protein n=65 Tax=Bacilli RepID=Q1JIL3_STRPD Length = 159 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 24/135 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y V DH + P + G D V + + P CGDV+ L +K DE IED F G Sbjct: 10 YMAVVADHSKRPHHHGQLDG----VEAVQLNNPTCGDVISLTVKF-DEDKIEDIAFAGNG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELP-----------------PVK 103 C + ASSS++T+ V GKS +EA A+ + +++ + E P P + Sbjct: 65 CTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQR 124 Query: 104 IHCSILAEDAIKAAI 118 I CS LA +A+K AI Sbjct: 125 IKCSTLAWNALKEAI 139 >UniRef50_C1XI12 SUF system FeS assembly protein, NifU family n=2 Tax=Meiothermus RepID=C1XI12_MEIRU Length = 147 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 24/141 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVG-APACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++ HY++P N GS ++ + V VG P+CGD ++L ++ + E I D RF+ Sbjct: 8 YKEIILRHYKSPHNYGSLESANVRV----VGDNPSCGDQIELLVETDGEQIA-DVRFRGQ 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPP-----------------VK 103 GC + AS+SL+T+ VKGK+ EA ++ + L+ PP + Sbjct: 63 GCAISQASASLMTDLVKGKTWAEALELERKFKSMILDGTPPSPELGDLAALSGVHKLAAR 122 Query: 104 IHCSILAEDAIKAAIADYKSK 124 + C+ LA +A++ A + ++K Sbjct: 123 VKCATLAWNALEQAAQEARTK 143 >UniRef50_A9W9Z0 Nitrogen-fixing NifU domain protein n=3 Tax=Chloroflexus RepID=A9W9Z0_CHLAA Length = 130 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 6/115 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E+++DHY PR+ G + G G P CGD + + ++V G + D +F GC Sbjct: 12 ERLLDHYRQPRHYGELPDAITYSG----GVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCS 67 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAA 117 ++ ++S++ E ++G ++ + A+ T + + E+ + HC+ L +KAA Sbjct: 68 VSVGTASILIEQLQGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAA 122 >UniRef50_C7M3C8 SUF system FeS assembly protein, NifU family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M3C8_ACIFD Length = 153 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 27/146 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DHY++PRN G D+ D G P CGD +KL I V + + D R +G Sbjct: 8 YREIILDHYKHPRNQGVLDDPDAIREEGF--NPLCGDEIKLSILVKGDRL-ADIRVDGHG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDE---------AQAIKNTDIAEEL-------ELP------ 100 C + +S+SL++E VKGK L E A + AE L EL Sbjct: 65 CSISRSSASLMSEAVKGKDLAEVDRIIERFKAMVVGGEGAAEGLDSLRTLGELAALQGVV 124 Query: 101 --PVKIHCSILAEDAIKAAIADYKSK 124 PV++ C+ L ++++ A+A +++ Sbjct: 125 KFPVRVKCATLPWNSLQNALATARAR 150 >UniRef50_B3DY81 NifU-like protein involved in Fe-S cluster formation n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY81_METI4 Length = 164 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 27/138 (19%) Query: 3 YSEKVIDHYENPRNVGSFDNN-DENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 Y E ++DH +PRN G + E GS P+CGD +++ +K+ +IED F Sbjct: 31 YQEIILDHSRHPRNFGKPEGEFREAEGSN----PSCGDSVRVFVKIGFPHQLIEDVHFLG 86 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAI-------------KNTDIAEELELP------- 100 GC +AS+SL+TE V+ K ++E + + +N +I EEL P Sbjct: 87 RGCAICMASASLMTEVVRQKKVEEIKTLIENFQAFLTGKEKRNAEIPEEL-FPLKGVRQF 145 Query: 101 PVKIHCSILAEDAIKAAI 118 P ++ C++L A++ I Sbjct: 146 PARVKCALLPWHALEKII 163 >UniRef50_A5EYF1 SUF system FeS assembly protein, NifU family n=2 Tax=Bacteria RepID=A5EYF1_DICNV Length = 146 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 22/134 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH +NPRN F S P CGD +K+ +++N EG+I D F G Sbjct: 8 YQELILDHSKNPRN---FHALTPCTHSATGHNPLCGDNLKVFVRLN-EGVIADLSFVGDG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ---------AIKNTDIAEE---------LELPPVKI 104 C + AS+S++TE GK+L+E Q A I +E + P ++ Sbjct: 64 CAISKASASMMTELAMGKTLEEFQKLYDLFHYIATTQNPIPQEVGKLQALAGVRQYPARV 123 Query: 105 HCSILAEDAIKAAI 118 C+ LA + AA+ Sbjct: 124 KCATLAWHTLDAAL 137 >UniRef50_D2QWB8 SUF system FeS assembly protein, NifU family n=2 Tax=Planctomycetaceae RepID=D2QWB8_9PLAN Length = 129 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 15/123 (12%) Query: 3 YSEKVIDHYENPRNVG-----SFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDAR 57 Y + V+DHYE+P + G + + D+N P CGDV+ +++K+++ +++A Sbjct: 10 YQDHVMDHYEDPYHHGHCIDATHMHEDDN--------PLCGDVIHVELKIDENQKVKEAW 61 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIK 115 F GC + AS+S++ E ++G S+DE +A+ + E L P + C +L+ ++ Sbjct: 62 FSGDGCCISQASASMLMEKIEGLSVDEVKAMSANQMLELFGARLTPNRQKCCLLSWRVVQ 121 Query: 116 AAI 118 A+ Sbjct: 122 QAV 124 >UniRef50_Q1ATZ0 SUF system FeS assembly protein n=2 Tax=Bacteria RepID=Q1ATZ0_RUBXD Length = 161 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 8/124 (6%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIK-VNDEGIIEDARFKTYGCGS 65 ++DHYE PR+ G + D + G P CGDV+ + +K +D IED ++ GC Sbjct: 10 LLDHYERPRHRGRLEEADVRMPG---GNPGCGDVVTIHLKGADDHRHIEDVTYEGEGCTI 66 Query: 66 AIASSSLVTEWVKGKSL--DEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAIADY 121 ++A++S++ E V ++L DE + ++ ++L ++ + C+ L +KAAI Y Sbjct: 67 SMAAASMILEEVHERNLTMDEVLRMDYNEMIDKLGRQIVASRPKCATLGLGTLKAAIRKY 126 Query: 122 KSKR 125 + R Sbjct: 127 QKDR 130 >UniRef50_Q3JQE2 SUF system FeS assembly protein, NifU family n=32 Tax=Burkholderiales RepID=Q3JQE2_BURP1 Length = 163 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 6/89 (6%) Query: 3 YSEKVIDHYENPRNVGSF-DNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +++H PR G + E G P CGD +K+Q+++ + G I D RF + Sbjct: 18 YQELIVEHKRAPRRFGKLAEPTHEARGHN----PQCGDDLKVQLRI-EGGRIGDIRFDGH 72 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKN 90 GC IAS+S++TE V G+ +D A+A++ Sbjct: 73 GCAICIASASMMTEAVIGRDVDAARALQQ 101 >UniRef50_A1WM67 Nitrogen-fixing NifU domain protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WM67_VEREI Length = 130 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 ++E ++ ++ +P D E S +G P CGD +++Q+ V D G+I+ AR++ +G Sbjct: 11 FNEIIVKNFSDPAFASELD---EATASIEIGNPVCGDRIRVQLDVTD-GLIKRARYQAWG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHC 106 C +++A+ ++ + GK L N DI L EL P + HC Sbjct: 67 CATSLATGNVFCACIDGKPLSVVLDTSNDDIETMLGELEPSQHHC 111 >UniRef50_A6LUJ3 SUF system FeS assembly protein, NifU family n=5 Tax=Bacteria RepID=A6LUJ3_CLOB8 Length = 141 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 27/138 (19%) Query: 3 YSEKVIDHYENPRNVGSFDNND-ENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+E +++H + N + DN D + G P+CGD + L++K+N+ G+IED F Sbjct: 7 YTELIMEHSTSKHNKRNLDNPDIKEKGHN----PSCGDEITLELKLNN-GVIEDLAFTGQ 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT-------DIAEELEL--------------P 100 GC + AS+S++ + +KGK+++EA + T +I ++ EL Sbjct: 62 GCAISQASTSIMIDLIKGKNIEEALKLTETFIGMIKREIKDDEELYALEDAMAFKNISNM 121 Query: 101 PVKIHCSILAEDAIKAAI 118 P ++ C++LA +K A+ Sbjct: 122 PARVKCAVLAWHTLKEAL 139 >UniRef50_Q8F7C7 NifU-like protein n=6 Tax=Leptospira RepID=Q8F7C7_LEPIN Length = 263 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 51/88 (57%) Query: 36 ACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE 95 CGD ++ +K++ + DA + T GCG I + ++ TE+ KGK++++ ++I +TDI Sbjct: 35 GCGDGYRIYLKIDSSETVTDASYTTTGCGFGIVALAMATEFAKGKTIEQLKSITSTDIEG 94 Query: 96 ELELPPVKIHCSILAEDAIKAAIADYKS 123 E P + + A A+ A+ DY+S Sbjct: 95 MFEFPERRKNYPESAVAALLQAVRDYES 122 >UniRef50_B8FN62 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN62_DESAA Length = 142 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 6/120 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS++V + + +P+ G ++ SG V +CGD M++ +K+ D GI+ D+ F T G Sbjct: 24 YSKEVYERWRDPKRFGRMEDA---TASGKVRG-SCGDSMEIYLKIED-GIVIDSSFFTDG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 CG +++S S+ + K ++ I I E L LP +HC+ LA A+ A+ Y Sbjct: 79 CGPSVSSGSMAADLAMKKGVEALTDITGEVILEALGGLPEESLHCAGLAASALSDAVDSY 138 >UniRef50_Q1AZN5 SUF system FeS assembly protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZN5_RUBXD Length = 140 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 23/134 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DHY PRN G ++ D + + P CGD + + + + + E A F G Sbjct: 6 YGQVIMDHYRRPRNRGELEDADL---TRHLLNPLCGDEVTVYARFEGDRVAE-ASFTGRG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA----IKNTDIAEELELP--------------PVKI 104 C + AS+S++TE ++GKS +EA+A K EE E P P +I Sbjct: 62 CSISQASASMMTERLRGKSREEAEAEISRFKRMMTGEE-EFPEGDDLAALKGVIQYPSRI 120 Query: 105 HCSILAEDAIKAAI 118 C+ LA +A + + Sbjct: 121 RCATLAWEAFQQGL 134 >UniRef50_A1SV02 SUF system FeS assembly protein, NifU family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SV02_PSYIN Length = 153 Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 27/145 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGA-PACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +IDH PRN E+ G P CGD + L ++++D II DA F+ Sbjct: 9 YQEVIIDHGRRPRNSKKL----EHPSCTQEGYNPLCGDRLTLYLRIDDNRII-DASFEGE 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELP------------------- 100 GC ++A+SSL+TE +K ++ EA+ + ++ + E P Sbjct: 64 GCAISMAASSLMTERIKNMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGVRDF 123 Query: 101 PVKIHCSILAEDAIKAAIADYKSKR 125 PV+I C+ L A+ A + + +K+ Sbjct: 124 PVRIKCATLPWHALNACLNNINTKQ 148 >UniRef50_A6Q975 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q975_SULNB Length = 152 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN---DEGIIEDAR 57 M +VI+H NP+N GS + GM P G+ + + ++V +E I D + Sbjct: 1 MTMDAQVIEHMMNPKNYGSLPGTN---AEGMGKNPENGEKVAIYMRVETDEEEPYIGDIK 57 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAA 117 F+ GC + + + S++TE KG +L+ A + + + +LP CS + AIKAA Sbjct: 58 FQAIGCTTTVVAGSMLTEEAKGLNLNGAYNLVDATMKLLEKLPAEDAACSEMVALAIKAA 117 Query: 118 IADYKSKRE 126 + Y ++E Sbjct: 118 VDTYVKRQE 126 >UniRef50_B7K023 SUF system FeS assembly protein, NifU family n=2 Tax=Cyanothece RepID=B7K023_CYAP8 Length = 144 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 26/139 (18%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVG-APACGDVMKLQIKVN-DEGIIEDARFKTY 61 + ++DHY+ P + G V G P CGD++ L I++N E IIED +F+ Sbjct: 5 QQLILDHYKQPHHRG----RTALVHRSHQGRTPYCGDIINLTIQLNASEEIIEDLQFEGN 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI------------KNTDIAEELE--------LPP 101 GC +AS+ L+ E V+GK + EA + K D +EL P Sbjct: 61 GCVICLASADLMAEAVRGKRVHEALQMVEQFRQMMQGQGKFPDYPQELAKLNSLQTITHP 120 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++I C+ LA +KAA++ Sbjct: 121 LRIKCANLAWYTLKAALSQ 139 >UniRef50_B6J805 IscU n=24 Tax=Bacteria RepID=B6J805_COXB1 Length = 158 Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 17/127 (13%) Query: 3 YSEKVIDHYENPRNVGSFD---NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFK 59 Y + +IDH NPR+ G + + E P CGD + + + G+I DARF+ Sbjct: 18 YHQLIIDHGRNPRHFGRLEMPTHTHEGYN------PLCGDRLTVFFQ-EKNGVITDARFE 70 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAI--KNTDIAEELELPPVKIHCSILAEDAIKAA 117 GC ++AS+SL+ E +KGKS+ A+ + + D+ + K + L + A+ A Sbjct: 71 GSGCAISMASASLMMEALKGKSIQAAEILFSQFHDL-----VTGTKREAAQLGKLAVLAG 125 Query: 118 IADYKSK 124 +A+Y ++ Sbjct: 126 VAEYPAR 132 >UniRef50_UPI0001C31C45 nitrogen-fixing NifU domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C45 Length = 137 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMV----GAPACGDVMKLQIKVNDEGIIEDARF 58 Y E +++HY+ P N + +E + S + P CGD +++QI V+ E +E RF Sbjct: 5 YREYILEHYKRPHN---WSPPEEELVSPDLEFEDSNPLCGDTLRVQIAVDAENRVEQIRF 61 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKA 116 +GC + A++S+ ++ VKG +++ + + + E L ++ ++ C++L+ +K+ Sbjct: 62 SGHGCAISQAAASMSSDEVKGMPVEDLMRLDKSFVLELLGIDISATRMKCALLSLKVLKS 121 Query: 117 A 117 A Sbjct: 122 A 122 >UniRef50_C8P0L7 NifU domain protein n=2 Tax=Erysipelotrichaceae RepID=C8P0L7_ERYRH Length = 146 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 13/121 (10%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 ++DHYENPRN + DE V +C D + +Q + + G+IED F C A Sbjct: 14 IMDHYENPRNKRT----DETYPKKRVSTDSCIDDLTIQAFIKN-GVIEDVCFDGQACTIA 68 Query: 67 IASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 +++S++TE VKGK++ EA I IAE + IH E ++ A+A R+ Sbjct: 69 TSAASIMTELVKGKTVAEADQI----IAEYNRM----IHLENFDEQLLQEAVAFKNVGRQ 120 Query: 127 A 127 A Sbjct: 121 A 121 >UniRef50_Q04QC7 NifU related protein associated with Fe-S cluster formation n=4 Tax=Leptospira RepID=Q04QC7_LEPBJ Length = 144 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 26/138 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 Y E ++DHY+NPR G + D + G+ P CGD +L++ +N EG I D R Sbjct: 8 YKEVILDHYQNPRFRGKLEPADLS-EHGI--NPLCGD--ELELTINLEGDKIADVRVTGK 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI---------KNTDIAEELELP-----------P 101 GC + AS S++ E ++GK++ EA+ I +N D E EL P Sbjct: 63 GCSISQASGSMMAESIRGKTVLEAEHILSRFKSMFLENRDPQFEKELEDLESMESVKKIP 122 Query: 102 VKIHCSILAEDAIKAAIA 119 +I C++L + ++ A++ Sbjct: 123 ARIKCAVLPWNTLERALS 140 >UniRef50_C9A1I3 SUF system FeS assembly protein n=2 Tax=Firmicutes RepID=C9A1I3_ENTGA Length = 162 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 23/137 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH +P + G+ ++ V + P CGDV+ L++ V E I+D F G Sbjct: 10 YRQVILDHSSHPHHRGTLGDSTYKV---ELNNPTCGDVIHLELAVEGE-TIKDVAFTGEG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEA--------QAIKNTDIAEELELP-----------PVK 103 C + AS+S++ + V GK+L EA + ++ +++ L P + Sbjct: 66 CSISTASASMMGDAVIGKTLTEAGELSGLFSELVQGHTVSDSDRLGDASMLGGVAKFPAR 125 Query: 104 IHCSILAEDAIKAAIAD 120 I C+ LA A++ AIAD Sbjct: 126 IKCATLAWKALEKAIAD 142 >UniRef50_Q7MYK4 Similarities with nitrogen fixation proteins n=2 Tax=Photorhabdus RepID=Q7MYK4_PHOLL Length = 118 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 4/105 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 ++ +ID++ NP G+ + +G P CGD + + + ++++G + +A F+ +G Sbjct: 2 FNNIIIDNFCNPDCQGTLSAPTIKLA---LGNPVCGDKVDIDLTLDNQGRVNNACFRAWG 58 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHC 106 C +++A S+ KGK+L+E A+ I L EL P + HC Sbjct: 59 CTASLAMSNQFCRHAKGKTLEELNALSPEGIDALLGELEPAQQHC 103 >UniRef50_C5NYL7 SUF system FeS assembly protein, NifU family n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL7_9BACL Length = 142 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH ++PRN G +++ M+ P+CGD + + +K+ D+ IIED +F G Sbjct: 10 YKQVILDHSKHPRNNGEIESS---YKLEMLN-PSCGDKITVSMKLVDD-IIEDIKFVGTG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEA 85 C ++AS+S++TE +KG S+++A Sbjct: 65 CSISLASASMLTEELKGLSVEKA 87 >UniRef50_Q02X70 NifU-like protein for Fe-S cluster formation n=29 Tax=Bacilli RepID=Q02X70_LACLS Length = 152 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 27/144 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGM-VGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++DH NPR+ G + G + + P CGDV++L ++ + +I + F + Sbjct: 10 YRAVILDHSSNPRHAGEL-----HTGCMIDLNNPTCGDVIRLTVEFEGD-VISNIAFSGH 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA-------------------QAIKNTDIAEELELPPV 102 GC + AS+S++T V GK+ +EA +A+ + + P Sbjct: 64 GCTISTASASMMTVAVLGKTKEEAKELATIFSAMVTGETDERQEALGDAQFLAGVSKFPA 123 Query: 103 KIHCSILAEDAIKAAIADYKSKRE 126 ++ CS LA +A+K AI D+ +E Sbjct: 124 RVKCSTLAWNALKKAI-DFGEAQE 146 >UniRef50_A9NHI3 SUF system FeS cluster assembly protein n=10 Tax=Bacteria RepID=A9NHI3_ACHLI Length = 148 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 3/89 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++DHY+NP+N G ND++ + + P CGD + +Q+ + D II D + + G Sbjct: 7 YRSVIMDHYKNPKNKGLI--NDDSYLTVHLNNPTCGDDLIVQLLIKDSKII-DLKQQGKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT 91 C AS+S+ +E +K K + EA+ + T Sbjct: 64 CSICCASASVASELLKNKDIFEAKELIQT 92 >UniRef50_D1AKY8 SUF system FeS assembly protein, NifU family n=6 Tax=Bacteria RepID=D1AKY8_SEBTE Length = 148 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 2/59 (3%) Query: 35 PACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI 93 P CGD + L+IK+N + IIEDA F GC + AS++++ + +KGKS++EA+ + TDI Sbjct: 36 PNCGDDLTLEIKLNSDNIIEDAAFLGNGCAISSASTAMLIDLIKGKSIEEAK--EKTDI 92 >UniRef50_Q03A02 Fe-S cluster formation protein, NifU-like n=8 Tax=Lactobacillus RepID=Q03A02_LACC3 Length = 148 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++D ++PR+ G D + V P+CGDV+ LQIK D G + D F G Sbjct: 10 YRAVILDEAQHPRHHGVLPAFDHEI---TVRNPSCGDVLHLQIK-EDAGRVTDVAFSGSG 65 Query: 63 CGSAIASSSLVTEWVKGKS 81 C + AS+SL+TE + GK+ Sbjct: 66 CTISQASASLMTEQIIGKT 84 >UniRef50_B9KY40 NifU family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY40_THERP Length = 156 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 11/131 (8%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGC 63 E++++HY PR+ + + D V G G P CGD++ + +KV+++G +I +A F+ GC Sbjct: 2 EQIVEHYRRPRHRHALPDAD-VVMPG--GNPGCGDIVTIYLKVDEQGHLIAEASFEGEGC 58 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIK-NTDIAEEL---ELPPVKIHCSILAEDAIKAAIA 119 + A++ ++ + V + Q ++ + + EEL E ++ C+ LA +KAA+ Sbjct: 59 TISQAAADILLDVVNEERWTLEQVLEADYHLMEELIGEEAVKLRPRCATLALGTLKAAVT 118 Query: 120 DY---KSKREA 127 Y + +REA Sbjct: 119 KYLRDQLRREA 129 >UniRef50_Q60A81 NifU family protein n=1 Tax=Methylococcus capsulatus RepID=Q60A81_METCA Length = 126 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 20/109 (18%) Query: 35 PACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNT--- 91 P CGD + L +K++D G+I D F+ GC + AS+SL+TE V+ EA A+ T Sbjct: 13 PLCGDRITLYVKIDDAGVIRDVSFQGSGCAISTASASLMTEIVRNMHESEAHALFETFHR 72 Query: 92 -----DIAEELE------------LPPVKIHCSILAEDAIKAAIADYKS 123 D A LE P ++ C+ LA +++AA+ + ++ Sbjct: 73 IATGKDDAVNLEELGKLAVLAGVRAYPARVKCATLAWHSLEAALENQET 121 >UniRef50_B8FIH0 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIH0_DESAA Length = 149 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS I N G + D+ V P CGD + + +++ EG ++ A+ G Sbjct: 24 YSATAIKFCNEQPNRGVLSDADQ---VSEVAGP-CGDSITVYLRIR-EGKVDRAKALVSG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 C A+AS+ E VKGK+L EA AI+ DI LE LP K C L+ A+ A+ +Y Sbjct: 79 CPGAVASAMAAMELVKGKTLTEALAIEEKDIVRMLEYLPDEKQDCIQLSAKALHKAVEEY 138 >UniRef50_B9L0V2 NifU family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0V2_THERP Length = 144 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGC 63 E + DH NPR+ G ++ V G G P CGDV+ + +K+ +G IED F GC Sbjct: 7 ELLRDHVRNPRHHGPLEDAT-IVLEG--GNPECGDVVTVYLKIAPDGETIEDVHFTGQGC 63 Query: 64 GSAIASSSLVTE------WVKGKSLDEAQAIKNTDIAEELELPPV---KIHCSILAEDAI 114 G + A++SL+ E W G+ A + + ++L P + C+ LA + Sbjct: 64 GVSQAAASLLMERLHQGHWTIGRI-----AAVDFSLVQDLVGPEAARSRPRCASLALSVL 118 Query: 115 KAAIADYKSKRE 126 KAAI Y+ +R Sbjct: 119 KAAIQKYERERR 130 >UniRef50_Q9X192 NifU-like protein n=8 Tax=Thermotogaceae RepID=NIFU_THEMA Length = 142 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 34/142 (23%) Query: 1 MAYSEKVIDHYENPRNVGSFDN-----NDENVGSGMVGAPACGDVMKLQIKVNDEGIIED 55 M YSE ++D+ + + G D+ +N+ +CGD + L +KV D G+++D Sbjct: 5 MMYSEAILDYANSKKFRGKLDDATVIEEGKNI--------SCGDEITLYLKVED-GVVKD 55 Query: 56 ARFKTYGCGSAIASSSLVTEWV-------------------KGKSLDEAQAIKNTDIAEE 96 A+F+ GC + AS+SL+ E + +G++ DE + +KN + + Sbjct: 56 AKFEGMGCVISQASASLMLERIIGERVEEIFSLIEEAEKMSRGENFDEGK-LKNVTLMSD 114 Query: 97 LELPPVKIHCSILAEDAIKAAI 118 ++ P ++ C ILA +K A+ Sbjct: 115 IKNYPARVKCFILAWKTLKEAL 136 >UniRef50_B0K2I6 SUF system FeS assembly protein, NifU family n=10 Tax=Thermoanaerobacter RepID=B0K2I6_THEPX Length = 137 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 3 YSEKVIDHYEN-PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSE +++HYEN P D + G P CGD + L +K+N + IIEDA F + Sbjct: 8 YSEVIMEHYENSPHEKELKDATHKERGYN----PLCGDNITLYLKMNGD-IIEDASFTGH 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA 85 GC + AS+S++ + +KGK EA Sbjct: 63 GCAISQASTSMMIDLIKGKDKKEA 86 >UniRef50_A8ZSW4 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSW4_DESOH Length = 105 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 37 CGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE 96 CGD +++ IK + IIE F GC + AS++ V +GK ++ A I + + Sbjct: 14 CGDTVEMFIKKGTDSIIEQVLFDIRGCRNTHASANAVAVLAEGKKIEAAWEITPEAVIDL 73 Query: 97 LE-LPPVKIHCSILAEDAIKAAIADYKSKREA 127 LE LPP HC+ LA A A+AD +++ E+ Sbjct: 74 LETLPPDHFHCAELAVGAFYLALADCRNQHES 105 >UniRef50_C0GTN3 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTN3_9DELT Length = 139 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 6/117 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + +V ++NP + N+D + + G+ CG+ +++ + + E +I A F + G Sbjct: 24 FGPEVYRRWKNPDYMARMQNHD--CMAAVTGS--CGNRVEIYLVLEQE-VIARATFFSEG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAI 118 CGS++ +S+ E +G++LD+A A+ D+ + L +P K H + LA A+ AI Sbjct: 79 CGSSVVCASMTCELARGRTLDQALALGAGDVMQALPGMPGSKKHYAALAVKALHRAI 135 >UniRef50_A8YU52 NifU-like protein n=4 Tax=Lactobacillus RepID=A8YU52_LACH4 Length = 153 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 24/129 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++++ NP+N GS + D V +CGD + L + +ND+ I +F G Sbjct: 10 YREVILENANNPQNHGSLADADYQT---TVYNSSCGDKLNLFLNLNDQNEISAIKFNGEG 66 Query: 63 CGSAIASSSLVTEWVKGK---------------------SLDEAQAIKNTDIAEELELPP 101 C + AS+SL+T+ VKGK S DE + + I + + P Sbjct: 67 CTISQASASLMTQVVKGKNKGEAIEIAKIFSKMAMGKDCSKDEIAKLGDAQIMTNIMMFP 126 Query: 102 VKIHCSILA 110 +I C+ LA Sbjct: 127 ARIKCATLA 135 >UniRef50_Q2JUE7 SUF system FeS assembly protein, NifU family n=6 Tax=Cyanobacteria RepID=Q2JUE7_SYNJA Length = 162 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 24/136 (17%) Query: 3 YSEKVIDHYENPRNVGSFDN-NDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKT 60 Y + +++ Y PRN G D + G P+CGD + L ++++ + I D +F+ Sbjct: 10 YQQVILERYRKPRNFGRVDPVHRRQRGHN----PSCGDTIDLTLQLDPGQERIADIKFEG 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEA-------QAI-----------KNTDIAEELELPPV 102 GC A+AS+ L+ + V+G+++ EA QA+ ++ + + + PV Sbjct: 66 EGCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGVAQFPV 125 Query: 103 KIHCSILAEDAIKAAI 118 +I C+ LA A+K A+ Sbjct: 126 RIKCANLAWHALKHAL 141 >UniRef50_D1C3Y7 Nitrogen-fixing NifU domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3Y7_SPHTD Length = 167 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 16/130 (12%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGC 63 E ++DHYE+PR+ + D + V G G P CGDV+ + + V+++G ++D F GC Sbjct: 8 EMLLDHYEHPRHRHA-DEGADVVMPG--GNPGCGDVITVYLTVDEDGKSVKDVSFVGEGC 64 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDI--------AEELELPPVKIHCSILAEDAIK 115 + A++S++ E + + D I NTD AE ++ P C+ LA +K Sbjct: 65 TISQAAASILMEMIHDEKWD-LDTIVNTDYHAMMDILGAEAVQSRP---KCATLALGTLK 120 Query: 116 AAIADYKSKR 125 AA+ Y R Sbjct: 121 AAVQKYLRDR 130 >UniRef50_A0LNT2 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNT2_SYNFM Length = 154 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%) Query: 13 NPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSL 72 NPR + F + S V P CG+ M++ +++ ++ I+ D F T GCG + A L Sbjct: 31 NPRQI-KFGKLPKATSSAKVTGP-CGETMEIHLEIQEDEIV-DGSFVTDGCGPSKACGFL 87 Query: 73 VTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 G++LD+A I+ I + +E LP HC+ LA ++ AI ++ Sbjct: 88 AVMLAIGRNLDDAAMIEGDTILDMIEDLPEDHHHCAYLAAATLQTAIHNH 137 >UniRef50_C1I2Y9 SUF system FeS assembly protein n=2 Tax=Clostridiales RepID=C1I2Y9_9CLOT Length = 143 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +++H + N DN D S P+CGD + L++K+N + IIED F G Sbjct: 7 YTELIMEHSTSRHNRRKLDNPDL---SEKGHNPSCGDEITLELKMNGD-IIEDLAFTGQG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA---------------------EELELPP 101 C + AS+S++ + +KGK +EA + T I + + P Sbjct: 63 CAISQASTSMMIDLIKGKDKEEALKLVETFIGMIKREINDEDELEDLEDAIVLKNISNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA +K A + Sbjct: 123 ARVKCAVLAWHTLKEAFGE 141 >UniRef50_C1AC48 Iron-sulfur cluster biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC48_GEMAT Length = 148 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 10/108 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++ H+ P N D D N S + P CGD +++ ++V D G + D F G Sbjct: 14 YQEALLAHHRAPHN--RRDMPDAN-ASAVFKNPVCGDEIQVFVRV-DGGHLVDVSFTGRG 69 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ----AIKNTDIA--EELELPPVKI 104 C A AS+S++T+ V G S+ EAQ A++ T ++ E + LP V + Sbjct: 70 CSIATASASMMTDAVMGLSVSEAQGLSAALERTLVSPDETVALPDVLV 117 >UniRef50_A0QX03 SUF system FeS assembly protein, NifU family protein n=20 Tax=Actinomycetales RepID=A0QX03_MYCS2 Length = 164 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 35/147 (23%) Query: 3 YSEKVIDHYENPRNVG---SFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARF 58 Y E ++DHY++P + G F +V P CGD + L++ ++D+G +ED + Sbjct: 7 YQEVILDHYKHPHHRGLREPFGAEVHHVN------PTCGDEVTLRVTLSDDGESVEDVSY 60 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP------------------ 100 GC + A++S++T+ V G+S+ + A+K D E+ Sbjct: 61 DGQGCSISQAATSVLTDQVIGQSVGD--ALKTVDAFTEMVSSRGTVEGDEDVIGDGIAFA 118 Query: 101 -----PVKIHCSILAEDAIKAAIADYK 122 P ++ C++L A KAA+A+ + Sbjct: 119 GVAKYPARVKCALLGWMAFKAAVAEAR 145 >UniRef50_C5CEE1 SUF system FeS assembly protein, NifU family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEE1_KOSOT Length = 146 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 26/143 (18%) Query: 3 YSEKVIDHYENPRNVGSFDN--NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 YSE ++ HY+N G ++ NDE G + +CGD + + +K ND I E F Sbjct: 7 YSEFILYHYKNSPYKGVLEDATNDEE-GKNL----SCGDQIHVYVKFNDNKI-ETISFDG 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAI------------KNTDIA------EELELPPV 102 +GC ++AS+S++ E + GKS++EA+ I N DI + ++ P+ Sbjct: 61 HGCAISMASASIMAETLSGKSVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPM 120 Query: 103 KIHCSILAEDAIKAAIADYKSKR 125 ++ C+ LA ++ I + + K+ Sbjct: 121 RVKCASLAWRTLERIIDEREQKK 143 >UniRef50_Q01180 Nitrogen fixation protein nifU n=6 Tax=Rhodobacter RepID=NIFU_RHOSH Length = 246 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 K +D + NPRN G + D G G+ GD ++L +++ + G + +ARF +G Sbjct: 7 KALDLFFNPRNAGPLEAAD---AVGTAGSLEVGDAIRLMLRI-EAGRVAEARFLAFGGAH 62 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDI 93 AIA S +T V G L A+A+ +I Sbjct: 63 AIACGSALTVLVTGLDLAAARAVTPEEI 90 >UniRef50_Q2LWF0 NifU-like protein involved in Fe-S cluster formation n=3 Tax=Syntrophus aciditrophicus SB RepID=Q2LWF0_SYNAS Length = 238 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Query: 36 ACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE 95 +CGD M++ +K N + ED T GC + V +GK++ E + I I E Sbjct: 47 SCGDTMEIALKFNGPRV-EDVHCWTDGCAISKMCVETVGMLARGKTVPELRTIDTASILE 105 Query: 96 EL-ELPPVKIHCSILAEDAIKAAIADYKSK 124 + +LP +HC++LAE ++ A++ Y K Sbjct: 106 RVGQLPETHMHCAVLAETTLQKAVSFYTLK 135 >UniRef50_A0LFS6 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFS6_SYNFM Length = 141 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Query: 37 CGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE 96 CGD +++ + V D G I A F+T GC ++A ++ G + +EA+ I I E Sbjct: 42 CGDTVEMFLMVRD-GKIRTASFETNGCIYSVACANTAVHMASGLTPEEARRITPDQIVEF 100 Query: 97 LE-LPPVKIHCSILAEDAIKAAIADYK 122 LE LPP + HC+ A A++ A+AD + Sbjct: 101 LETLPPEEEHCAEQAVKALRLALADAR 127 >UniRef50_A7H8S0 SUF system FeS assembly protein, NifU family n=3 Tax=Bacteria RepID=A7H8S0_ANADF Length = 149 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 24/136 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E V+DH + PRN G + G+ P CGD + + ++ + G++ D RF+ G Sbjct: 8 YQEVVLDHGKRPRNYGPLEGATHRA-EGL--NPLCGDRITVAARL-EGGVVRDVRFEGSG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--------------------PV 102 C + AS+S++T KG++ E A+ E P P Sbjct: 64 CAISKASASVMTGVAKGRTPAEIDAVFERFHRLVTEGPGAVDAGQLGKLAVFGGVHEYPT 123 Query: 103 KIHCSILAEDAIKAAI 118 ++ C+ LA A++ A+ Sbjct: 124 RVKCASLAWHALRQAL 139 >UniRef50_B8FDL0 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDL0_DESAA Length = 133 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+K ++ + + G D D G CGD + I V + I+E RF G Sbjct: 12 YSDKFLELASDYNHAGIPDRYDARGGQ----TGQCGDTVHFFISVMHKRIVE-VRFALEG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C +A ++ + E + K ++EA + + +AE L LP HC+ LA A+ +AD Sbjct: 67 CMHTLACANAIVEMIAEKPVEEAWDVTDDAVAEYLGGLPEDHYHCAELAVGALYKTLADL 126 Query: 122 KSK 124 K+K Sbjct: 127 KTK 129 >UniRef50_C8WNS3 Nitrogen-fixing NifU domain protein n=3 Tax=Coriobacteriaceae RepID=C8WNS3_EGGLE Length = 166 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 6/128 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKV--NDEGIIEDARFKT 60 YS+ ++ N RN G+ + + MVG G+V V +D A FKT Sbjct: 4 YSDTLLSVVANFRNGGAPEGFNAQ---SMVGKSKRGEVALRLFAVIDHDTRTFVRAGFKT 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV-KIHCSILAEDAIKAAIA 119 GC + +S+V ++G + DEA AI D+ L+ PV K++ A +A++A I Sbjct: 61 RGCLAVTGCASVVCSMLEGCTFDEALAITTDDVKTALDGVPVDKVYTIHFAIEAVRALIG 120 Query: 120 DYKSKREA 127 DY ++ A Sbjct: 121 DYLVRQGA 128 >UniRef50_C0QAY3 Predicted iron-sulfur cluster assembly protein (NifU like protein) n=2 Tax=Deltaproteobacteria RepID=C0QAY3_DESAH Length = 149 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 7/129 (5%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 A E+ + ++NPR G D+ D V +G CGD M + K + ++E A + T Sbjct: 23 ALGEQGFERWQNPRFRGRLDDYD--VHGHALGD--CGDSMDIYFKFERDRVVE-ASYMTD 77 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCGS+ S E G +E I I +L +P HC+ LA ++ A+ Sbjct: 78 GCGSSNVCGSFAAEMTIGMGAEELADITGDMILAKLGNMPEDDRHCAFLAAGTVQEALRI 137 Query: 121 YKS-KREAK 128 Y + RE K Sbjct: 138 YMTGSRERK 146 >UniRef50_C1VDX7 Cysteine desulfurase n=2 Tax=Halobacteriaceae RepID=C1VDX7_9EURY Length = 543 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 4/116 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V +HY NP+N G N S +CGD + + V ++G IE+ F++ Sbjct: 417 YHDLVYEHYRNPQNTGGLSNPTFTKHS---EETSCGDDGEFHVDVAEDGTIENIAFESES 473 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN-TDIAEELELPPVKIHCSILAEDAIKAA 117 C + A +S+++E ++G SL+E + D + P ++ C + E+ I A Sbjct: 474 CAVSSAVASMLSERLEGMSLEEVAELDGFVDEVLDGTYPDIRRDCVVGPEEVICEA 529 >UniRef50_Q6APN8 Related to nitrogen fixation protein (NifU) n=1 Tax=Desulfotalea psychrophila RepID=Q6APN8_DESPS Length = 136 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 2/91 (2%) Query: 37 CGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE 96 CGD M++ +++ D+ + E R+ + GC + +GK+++E + I + + Sbjct: 44 CGDTMEMSLRIRDDRV-EKTRYSSDGCSISQQCIEAAAMLAQGKTIEEVRKINMMHVIDI 102 Query: 97 L-ELPPVKIHCSILAEDAIKAAIADYKSKRE 126 + +LP +HC+ LAE ++ AI DY K+ Sbjct: 103 VGDLPDSHLHCAQLAETTLQHAIGDYVQKQR 133 >UniRef50_A9BJG9 SUF system FeS assembly protein, NifU family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJG9_PETMO Length = 145 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 5/86 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+ ++D+ +N R N + G + +CGD + L +KV D II++ F +G Sbjct: 12 YSDIILDYAKNERYKKEIQNAKKAEGKNL----SCGDEITLYLKVED-NIIKEITFTGHG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI 88 C + AS+S++ E+++GK++DEA I Sbjct: 67 CIISQASASMMCEYLEGKTVDEANKI 92 >UniRef50_A1ZYV1 SUF system FeS assembly protein, NifU family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYV1_9SPHI Length = 142 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++ H + P N F +E P CGD +L I + + +I+ A F YG Sbjct: 9 YQSVILTHNKTPHN---FKKAEELPLHSEAYNPLCGDHFQLYISL-EGAVIQQAFFHGYG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT 91 C + AS+S++ + ++GK+L EA+ + T Sbjct: 65 CAVSKASTSVLLQTIEGKTLTEAKTLIET 93 >UniRef50_C0WNL2 Iron-sulfur (Fe-S) cluster formation protein IscU n=4 Tax=Lactobacillus RepID=C0WNL2_LACBU Length = 151 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +IDH + PR+ G + G + P CGDV+K+ + V D G I D F G Sbjct: 10 YKTVIIDHAQFPRHKGELA---DPTGEKCLKNPTCGDVIKVSVVVKD-GQINDVAFDGSG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI 88 C + AS+SL+T + GK + A+ + Sbjct: 66 CTISQASASLMTTVLIGKDVKTARKL 91 >UniRef50_C7DHB6 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHB6_9EURY Length = 128 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 5/88 (5%) Query: 37 CGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE 96 CGD + + + + D I +DA F+ GC + +A++ + E++K K +DE + +D E Sbjct: 37 CGDDVTVYLSIQDNRI-KDASFEGEGCSATVAAADALMEFIKSKEVDEVVSF-GSDFMES 94 Query: 97 L---ELPPVKIHCSILAEDAIKAAIADY 121 L ++ P + C L A+KAAIA+Y Sbjct: 95 LLNVKIEPSRSRCVNLGLRAVKAAIAEY 122 >UniRef50_A8S193 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S193_9CLOT Length = 135 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 14/108 (12%) Query: 27 VGSGMVGAPACGDVMKLQIKVNDE-------GIIEDARFKTYGCGSAIASSSLVTEWVKG 79 +G+G P+C DV+ + E I E + F + C A+ V+G Sbjct: 23 MGTGACQDPSCRDVLTYYFSADRELITSISYTITETSCFPSKACAETAAA------LVRG 76 Query: 80 KSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADYKSKRE 126 + + EA I ++ IA L L P +HC+++AE A+K A+ DY KR+ Sbjct: 77 RPVLEAYTIDSSAIATALGGLEPEYMHCAMMAELALKRAVLDYAGKRK 124 >UniRef50_Q1WR14 IscU protein n=10 Tax=Lactobacillus RepID=Q1WR14_LACS1 Length = 149 Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 23/143 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++ +PR+ G +N V + P CGDV+ L + D I +D F YG Sbjct: 8 YRQAILEEANHPRHKGKLENESVEVE---LRNPTCGDVITLTALIEDNKI-KDIAFDGYG 63 Query: 63 CGSAIASSSLVTEWVKGKSLD-------------------EAQAIKNTDIAEELELPPVK 103 C + +S+S++T V K D + + + I E ++ P + Sbjct: 64 CTISQSSASIMTNEVLNKDFDTIKNMVLSFSDMITKEVKPDRKVLGEAIILEGVKQFPAR 123 Query: 104 IHCSILAEDAIKAAIADYKSKRE 126 I C++L+ AI I Y+ K E Sbjct: 124 IKCAMLSWKAIYQLIEKYEGKGE 146 >UniRef50_A8F547 Nitrogen-fixing NifU domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F547_THELT Length = 119 Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YSEK + P + D + V P GD +++ +K+ + +I+D FK Sbjct: 1 MTYSEKFKQLFMYPAHANQIDYTH----TAEVVYPEHGDRVRIFVKLEN-FLIKDISFKA 55 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 GC IA+S + V GK+++ A I I +E++ + C + +A+K A++ Sbjct: 56 IGCPRVIAASEALCRLVNGKNINIALEINEEHIRQEMDFHDKEFKCIMAPVEALKKALS 114 >UniRef50_Q1DD56 SUF system FeS assembly protein, NifU family n=2 Tax=Bacteria RepID=Q1DD56_MYXXD Length = 152 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 26/137 (18%) Query: 3 YSEKVIDHYENPRNVGSFDN-NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E V++H + PRN + E G P CGD + + +KV + G+I+D F+ Sbjct: 11 YQEVVLEHSKRPRNYRVVEGATAEAAGHN----PLCGDQLVVTLKV-EGGVIKDVAFQGQ 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ--------------------AIKNTDIAEELELPP 101 GC + AS+SL+T VK ++ EA+ A+ + + P Sbjct: 66 GCAISKASASLMTGAVKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSGVSEFP 125 Query: 102 VKIHCSILAEDAIKAAI 118 ++ C+ LA ++AA+ Sbjct: 126 ARVKCASLAWHTLRAAL 142 >UniRef50_B0S0D2 Iron-sulfur cofactor synthesis protein NifU homolog n=20 Tax=Clostridia RepID=B0S0D2_FINM2 Length = 151 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 22/111 (19%) Query: 35 PACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEA--------- 85 P+CGD + LQ+KV D+ IED + GC + AS+S++ + +KGKS++EA Sbjct: 36 PSCGDEITLQLKVQDD-TIEDIAYTGMGCAISQASTSIMCDVIKGKSVNEAIDLCNKFIS 94 Query: 86 ------------QAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSK 124 + +K+ + + P ++ C++L+ +K + + KS+ Sbjct: 95 MIKGEITDRKELKVLKDAVCFQSISTLPARVKCAVLSWYTLKDMLENDKSE 145 >UniRef50_Q65JA1 Fe-S cluster formation protein n=3 Tax=Bacillus RepID=Q65JA1_BACLD Length = 143 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 3/87 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++DH RN D + V P CGDVM L I + +E I EDA F G Sbjct: 8 YRSVIMDHARYRRNFRKIDKH--GVYYVHYKNPTCGDVMTLFIDIKNEKI-EDAAFIGDG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIK 89 C ++ASSS++TE +KGK+L EA ++ Sbjct: 65 CSISMASSSIMTELIKGKTLKEAGLMR 91 >UniRef50_UPI00001D2CFF iscU protein n=1 Tax=Gloeobacter violaceus PCC 7421 RepID=UPI00001D2CFF Length = 51 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 19/29 (65%), Positives = 27/29 (93%) Query: 97 LELPPVKIHCSILAEDAIKAAIADYKSKR 125 L LPPVKIHCS+ AEDA++AA+ADY++++ Sbjct: 15 LSLPPVKIHCSVPAEDAMRAAVADYQAEQ 43 >UniRef50_A5ICQ0 NifU family iron binding protein, [Fe-S] cluster formation/repair protein IscU, HesB n=5 Tax=Legionella pneumophila RepID=A5ICQ0_LEGPC Length = 127 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACG-DVMKLQIKVNDEGIIEDARFK 59 M Y++ V D++ P+++G D ND V G+ P + + IK + + +I ARFK Sbjct: 1 MMYNKIVQDYFFQPQHIGKLDLNDPFV-IGVQSQPINQLNTVHFYIKCDGDKLISKARFK 59 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 T G IA+ + ++GK+L+ I + L++ + ++ ED K A+ Sbjct: 60 TNGNPYVIAAMEWICCQIEGKTLESLPLIDFQILINVLQITNNQYPVAVQVEDIYKEALT 119 Query: 120 DYKSKRE 126 + K E Sbjct: 120 LMRKKFE 126 >UniRef50_A6Q4J9 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4J9_NITSB Length = 159 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 6/122 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTYGCG 64 K ++ NP N G D G G+++ + +K++ II++ +++T GCG Sbjct: 11 KYLELMLNPTNYGEMKEYD---AKGFGKNAQTGEMVVIYLKIDPISTIIKEIKWQTNGCG 67 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADYKS 123 + + S +L +E KGK+L D+ E++ + PP C + A AA+ DY++ Sbjct: 68 TTLVSGALFSEEYKGKTLQSGVEF-TQDVFEKIKDNPPEDAACGEVVARAFMAAVQDYEA 126 Query: 124 KR 125 ++ Sbjct: 127 RK 128 >UniRef50_D2EEV4 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEV4_9EURY Length = 125 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 11/121 (9%) Query: 7 VIDHYENPRNVGSFD--NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 +++ Y NP + G N EN S P+CGD + + V + GI++DA F GC Sbjct: 9 LVELYRNPEHYGKLSKYNYSENGYS-----PSCGDKFSVYLDVEN-GIVKDASFDGKGCV 62 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV---KIHCSILAEDAIKAAIADY 121 + S S + ++ GK L E + ++ D+ L + + ++ C+ + DA+K + Sbjct: 63 ISTVSLSKLCSFLIGKPLKEIEKMELKDVESLLGIEDISISRVKCATVGLDAVKKVYKEV 122 Query: 122 K 122 K Sbjct: 123 K 123 >UniRef50_B1AJ94 SUF system FeS assembly protein, NifU family n=15 Tax=Ureaplasma RepID=B1AJ94_UREP2 Length = 155 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 ++ HYE+P+N F ++ N S CGD + + +K+N + II D F GC + Sbjct: 16 IMQHYEHPKNKVCFVQDEINYLSYHNTTEGCGDDITVYVKLNHQKII-DVVFLGTGCAIS 74 Query: 67 IASSSLVTEWVK 78 I+S+ ++ E VK Sbjct: 75 ISSTDIICELVK 86 >UniRef50_B1VAA5 NifU homolog n=3 Tax=Candidatus Phytoplasma RepID=B1VAA5_PHYAS Length = 147 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI---IEDARFK 59 Y + ++ HY+ P+N G + D++ S +CGD + LQIK + IED ++K Sbjct: 8 YRDIIMKHYQEPQNWGL--SQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIEDIKYK 65 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA 94 T C AS+SL++ ++K +++ NT +A Sbjct: 66 TQSCAICRASASLMSLYLKNLEINQCLNKINTFLA 100 >UniRef50_Q98R36 NITROGEN FIXATION PROTEIN NIFU n=1 Tax=Mycoplasma pulmonis RepID=Q98R36_MYCPU Length = 144 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 ++ HYE P N+ D N + + + + +C D + +++++ D+ I+++ F GC Sbjct: 13 IMKHYEFPINL---DKNLDEKTANQIYSSSCADSISIKLEI-DKNIVKNISFNGSGCAIF 68 Query: 67 IASSSLVTEWVKGKSLDEAQAI 88 I+S+ L+ E +K K++DE I Sbjct: 69 ISSTDLLLEQIKNKNIDEVLDI 90 >UniRef50_Q1J1X4 SUF system FeS assembly protein n=4 Tax=Deinococci RepID=Q1J1X4_DEIGD Length = 140 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 31/135 (22%) Query: 7 VIDHYENPRNVGSFDN----NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + DH ++PR G EN P CGD + + +V + G + + RF G Sbjct: 11 ITDHSQHPRGRGEIAGVPHATREN--------PGCGDQVTVWARV-EGGRLLEVRFTGRG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPP-------------VKIH--- 105 C + AS+SL+T+ + GK L+EA+A+ A + E PP ++H Sbjct: 62 CAISQASASLMTQALAGKGLEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHARR 121 Query: 106 -CSILAEDAIKAAIA 119 C++LA A++AA+A Sbjct: 122 KCALLAWQALEAALA 136 >UniRef50_Q21XB3 SUF system FeS assembly protein n=6 Tax=Bacteria RepID=Q21XB3_RHOFD Length = 162 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH PRN G D+ + G+ P CGD + + + + + +E F Sbjct: 9 YQEVILDHNRKPRNYGELDHPSHH-AEGV--NPLCGDHIHVALDLKGDS-VERIAFHGES 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI 88 C AS+S++T VKGKS EA+ + Sbjct: 65 CAICKASASMMTVAVKGKSAIEAKTL 90 >UniRef50_A4EB20 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB20_9ACTN Length = 144 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 35 PACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA 94 P+CGD + LQ++V ++ +IE+A F +GC + AS+ ++ + + G++++EA+ + +A Sbjct: 35 PSCGDELTLQLRVEND-VIEEASFTGHGCAISQASADIMADLITGETVEEARRLAGLFLA 93 >UniRef50_C9KQH6 SUF system FeS assembly protein, NifU family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQH6_9FIRM Length = 148 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 52/87 (59%), Gaps = 6/87 (6%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGA-PACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+E + +H NP N ++ + + G P+CGD + L++++ + G+++DA F Sbjct: 7 YTELIGEHSRNPEN----KHHLAHATCALKGHNPSCGDEITLELQI-ENGVVKDASFTGV 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI 88 GC + AS+ ++ + ++G+ +++A+ + Sbjct: 62 GCAISQASTDIMIDLIRGQKVEKAREL 88 >UniRef50_C4Z7J6 Nitrogen fixation protein NifU-like protein n=10 Tax=Bacteria RepID=C4Z7J6_EUBE2 Length = 146 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 24/142 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Y+E + DH +P + DN D + G+ P+CGD + L++K +D + I D F Sbjct: 7 YNEVLTDHNMHPYHKHDIDNADLEL-EGV--NPSCGDDIILKLKFDDAKKTIVDGAFTGD 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA--------QAIKNTDIAEEL-ELP-----------P 101 GC + AS+ ++ E + GK +DEA + IK+ EE+ EL P Sbjct: 64 GCAISQASADIMLELIIGKPIDEAVHLSELFLKMIKDEATEEEIDELDEAGALRDISHMP 123 Query: 102 VKIHCSILAEDAIKAAIADYKS 123 ++ C++L ++ + + K+ Sbjct: 124 ARVKCAVLGWHTMEEMVENLKN 145 >UniRef50_D2LAE9 Nitrogen-fixing NifU domain protein n=2 Tax=Desulfovibrio RepID=D2LAE9_9DELT Length = 120 Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Query: 30 GMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIK 89 GM ACG +K+Q+ +ND+ I+E A CG + + + E V+G S+ +AQA+ Sbjct: 24 GMSECSACGRAVKMQLLINDDVIVE-AGGSVESCGYSRECMAALIETVRGMSVYDAQAVS 82 Query: 90 NTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREA 127 D + K+ C A++ A+ +Y+ + A Sbjct: 83 TEDFQPRMTRVIEKLGCDNWCVAALRIALRNYRIREAA 120 >UniRef50_Q6MEW2 Putative iron-sulfur cluster assembly protein nifU n=2 Tax=Parachlamydiaceae RepID=Q6MEW2_PARUW Length = 263 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 3 YSEKVIDHYENPRNVGSFDNNDE-----NVGSGMVGAPACGDVMKLQIKVN-DEGIIEDA 56 YS+K++ + PR +G F+ + G G A G+ + L V+ D+GII DA Sbjct: 15 YSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAI 88 +F+ YG + I ++ + E V GK+ D+A+ I Sbjct: 75 KFQAYGQSALIGAAEVACELVIGKNYDQAKRI 106 >UniRef50_C0D022 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D022_9CLOT Length = 136 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 7/124 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY--G 62 EK+I + E N+G + +G G P CGDV+ + + E II + RF Sbjct: 4 EKIILYSEKTENLG---EPELFLGRGEAREPGCGDVLAMFVDTRRE-IITECRFTITESA 59 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 C A ++ E GK + EA I ++E L IHC+ +AE A+K + DY Sbjct: 60 CPPLKACAARAAELALGKPVMEAYLISADALSEFFGGLEQESIHCAQMAEIALKRTLKDY 119 Query: 122 KSKR 125 +R Sbjct: 120 AVRR 123 >UniRef50_C4XEA9 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA9_MYCFE Length = 145 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 29/136 (21%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 +++HY PR+ S N + +C D ++ ++ + + I ED +F GC Sbjct: 15 IMEHYLKPRHKSSSLKN-----KIIKHGESCADYLECELNIKNNQI-EDIKFDGQGCAFF 68 Query: 67 IASSSLVTEWVKGKSLDEA-------------QAIKNTDIAEELELPPV---------KI 104 IAS+ L+ + +KGK +DE+ + + DI E+LE + ++ Sbjct: 69 IASTDLLIDLLKGKKIDESICLIELYEKFILDEKLNENDI-EKLETLAIFDNVKTQFNRV 127 Query: 105 HCSILAEDAIKAAIAD 120 +C+++ AIK + D Sbjct: 128 NCALMLARAIKEKLQD 143 >UniRef50_D2RA02 SUF system FeS assembly protein, NifU family n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA02_GARVA Length = 233 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 32/129 (24%) Query: 23 NDEN--VGSGMVGAPACGDVMKLQIKV-----NDEG-IIEDARFKTYGCGSAIASSSLVT 74 +DEN +G P CGD + +++++ NDE I+ ++ +GC + AS S++ Sbjct: 99 SDENSALGQSHQFNPTCGDEVTMRVELSRSANNDETPIVSSIKWDGHGCSISQASLSMMV 158 Query: 75 EWVKGKSLDEA------------------------QAIKNTDIAEELELPPVKIHCSILA 110 + V+GKS+DEA A+++ + + + P++I C++LA Sbjct: 159 DLVEGKSVDEALQLDALFHKLMESRGEGLQSEEDEDALEDAMVLQGVSRYPMRIKCALLA 218 Query: 111 EDAIKAAIA 119 + +K +IA Sbjct: 219 WEGLKDSIA 227 >UniRef50_Q7NBI8 Putative uncharacterized protein n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBI8_MYCGA Length = 144 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 13/105 (12%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 +ID+Y+NP+N +D N + +C D L + + D+ ++ D +F GC + Sbjct: 13 IIDYYQNPKNFIKEPISDPNYKVIKTKSDSCADQFDLYLLIKDDLLV-DLKFSGSGCIIS 71 Query: 67 IASSSLVTEWVKGKSLDEAQA------------IKNTDIAEELEL 99 + +++++ K LDE + +KN +AEE ++ Sbjct: 72 QTTFDFLSKYLINKKLDEVKKLLSAYLEFIFKDVKNPLLAEEFDI 116 >UniRef50_Q0AAQ4 SUF system FeS assembly protein, NifU family n=5 Tax=Proteobacteria RepID=Q0AAQ4_ALHEH Length = 171 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+ H PRN + + G P CGD +++ +++++ G + A F Sbjct: 31 YRKIVLAHNRQPRNHHPLEPCSHH-AEGY--NPVCGDHIQVYLRLDEAGRVAAASFTGEA 87 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI 88 C ASSS++TE V G E A+ Sbjct: 88 CAICTASSSMMTEVVAGLDASEVAAL 113 >UniRef50_Q04EW3 Fe-S cluster formation protein, NifU-like n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04EW3_OENOB Length = 146 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 23/135 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++D + R G N + P CGDV++LQIKV+D I A F+ G Sbjct: 10 YRQVILDAAVDQRYRGQLLNP---TAVQLAHNPNCGDVLELQIKVSDRHITAIA-FQGQG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA-------------------IKNTDIAEELELPPVK 103 C + AS+S++ + +SL+ Q + + + ++ P + Sbjct: 66 CTISQASASILADLALHQSLESMQTRISQFQKMITGKESVEIDQLGDASVFSKISQFPTR 125 Query: 104 IHCSILAEDAIKAAI 118 + C+ L DA++ + Sbjct: 126 VKCAGLVWDALEQML 140 >UniRef50_C7MD35 SUF system FeS assembly protein, NifU family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MD35_BRAFD Length = 152 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 11/93 (11%) Query: 3 YSEKVIDHYENPRNVG---SFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI--IEDAR 57 Y+E V++H + P + G FD +V P CGD + L++ ++++ IED Sbjct: 9 YTELVVEHDKRPLHAGLREPFDAEVHHVN------PTCGDEITLRLHLSEDVAERIEDLS 62 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKN 90 + GC + AS+S++ + + G+++ E ++ Sbjct: 63 YDAIGCAMSRASASIMADLLIGRTVAEIGPVQT 95 >UniRef50_O42770 Putative uncharacterized protein (Fragment) n=1 Tax=Paxillus involutus RepID=O42770_PAXIN Length = 47 Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust. Identities = 17/23 (73%), Positives = 22/23 (95%) Query: 102 VKIHCSILAEDAIKAAIADYKSK 124 VK+HCS+LAEDAI++AI DY+SK Sbjct: 1 VKLHCSMLAEDAIRSAIRDYRSK 23 >UniRef50_C6N0B9 NifU family iron binding protein n=2 Tax=Legionella RepID=C6N0B9_9GAMM Length = 131 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M Y+ V D++ +PR+VG + N + V G + + ++ + +I+ FKT Sbjct: 1 MIYNNTVCDYFFSPRHVGIIELNHDLVVVFKNKQKGQGTI-EFYMQCGQDRLIQKVCFKT 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP 100 G IA + +KG++LD+ I + +EL++P Sbjct: 60 NGNPYLIAGLEWLCRQLKGRALDKVPKIDYQLLIKELDIP 99 >UniRef50_D0RPD7 SUF system FeS assembly protein, NifU family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPD7_9RICK Length = 152 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 29/150 (19%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDAR-FKTY 61 Y + +++H +NP N S P CGD K++I N + I D F+ Sbjct: 7 YQQTILEHSKNPLNFKSLKTCTHQANGN---NPLCGD--KVEIFTNIKNDINDEICFQGA 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIK------------NTDIAE-----------ELE 98 GC +IAS+S++T+ + KS+ +++ I N D+ EL+ Sbjct: 62 GCAISIASASILTKVLNKKSVQDSKNILENFIKMVENKEFNFDLLNNEEKTLLMTFSELQ 121 Query: 99 LPPVKIHCSILAEDAIKAAIADYKSKREAK 128 P++ C+ ++ AA+ EAK Sbjct: 122 KFPMRSKCATMSWSTFNAALNRDNYNTEAK 151 >UniRef50_C9LR10 SUF system FeS assembly protein, NifU family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR10_9FIRM Length = 149 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Query: 35 PACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEA 85 P+CGD + +++KV + GII+D + GC + AS++++ E ++ +++DEA Sbjct: 36 PSCGDDIDVEVKV-EGGIIKDLAYTGTGCAISQASTAMMAELLQDRTVDEA 85 >UniRef50_C0QB63 Putative nitrogen fixation protein NifU (NifU-like protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QB63_DESAH Length = 151 Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Query: 37 CGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE 96 CGD ++ + + G++ + GC + A ++ V GK++D A I + D++ Sbjct: 43 CGDTVEFFLMATN-GVLTSITYDVDGCKNTNACANTVVHLATGKTVDAAWNITHEDVSAF 101 Query: 97 LE-LPPVKIHCSILAEDAIKAAIAD 120 L+ LP HC+ LA A A+ D Sbjct: 102 LKTLPAHDTHCAELAVGAFYLALKD 126 >UniRef50_C2BX07 Possible iron-sulfur (Fe-S) cluster formation protein IscU n=3 Tax=Mobiluncus RepID=C2BX07_9ACTO Length = 180 Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 35 PACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKN 90 P CGD + LQ+KV D G + + + +GC + AS S++ E V+G+ L+ ++ Sbjct: 37 PTCGDEVTLQVKVTD-GKLRELVWDGHGCSISQASLSMMWELVQGQDLEAVHGLEQ 91 >UniRef50_Q6KIL2 Aminotransferase protein U homolog n=1 Tax=Mycoplasma mobile RepID=Q6KIL2_MYCMO Length = 142 Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 8/95 (8%) Query: 1 MAYSEK-----VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIED 55 M +S K ++ HY +P + + + N S + +C D + L +K+ ++ ++ D Sbjct: 1 MNFSNKEKTDIIMKHYSSP--INKVEEIETNSKSIYRHSASCVDEINLNLKIENDFLV-D 57 Query: 56 ARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKN 90 A+F+ GC ++S+ + E +K K L + I N Sbjct: 58 AKFQGVGCAVFLSSADIFLEEIKNKPLSKVNEIAN 92 >UniRef50_Q03GT9 Fe-S cluster formation protein, NifU-like n=3 Tax=Lactobacillales RepID=Q03GT9_PEDPA Length = 146 Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 22/130 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++H + P VG + + + P CGD +++ +KV D+ + E F G Sbjct: 8 YQKIIVNHAKYPIGVGVLPQYNYH---AKLKNPDCGDDIEVYLKVVDQHL-EQISFTGQG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI----------KNTDIAE--------ELELPPVKI 104 C + AS+S++ + + GK + EAQ + K+ D ++ L P ++ Sbjct: 64 CIISQASASMMVDALSGKRILEAQQLMQNFQNLILGKDYDESQLGDLIAFATLNQFPTRV 123 Query: 105 HCSILAEDAI 114 C +LA A+ Sbjct: 124 RCGMLAWHAM 133 >UniRef50_Q14L11 Putative iron-sulfur cluster assembly protein n=1 Tax=Spiroplasma citri RepID=Q14L11_SPICI Length = 150 Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M + ++DHY P+ G V S + +C D + L++ + II ARF Sbjct: 9 MFLRQIIMDHYSEPQYKGL--TKKPTVYSIHQASESCIDDIYLELMIERNKIIS-ARFDG 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP 100 GC + ASS ++ + ++GK++ + AI +A + P Sbjct: 66 VGCAISTASSDIMAQELEGKAIKDGLAIIENYLAMVFDQP 105 >UniRef50_D0WJI3 Putative type I restriction-modification system, S subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJI3_9ACTN Length = 213 Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 30 GMVGAPACGDV-MKLQIKVND-EGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQA 87 GM G+ G + ++L VN +IE A ++ +GC + IAS W++GK+++EA A Sbjct: 67 GMAGSAKHGVIAVQLFAHVNPATHVIERAGYRAHGCLAMIASGCAAAYWMEGKTVEEAAA 126 Query: 88 IKNTDIAE 95 I +AE Sbjct: 127 ISAETLAE 134 >UniRef50_Q4A687 Nitrogen fixation protein NifU n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A687_MYCS5 Length = 147 Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 ++DHY NPR+ FD N + + C D + + + D+ ++D + T GC Sbjct: 17 IMDHYVNPRH---FDKNI--LEKNVFYNNTCSDKLVVNATIEDKK-LKDIKHYTQGCLIC 70 Query: 67 IASSSLVTEWVKGKSLDEAQAIKN 90 +S+S+ + ++ K+L EA I N Sbjct: 71 ASSASIFIDQIQNKNLSEAFEINN 94 >UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3185B Length = 519 Score = 38.5 bits (88), Expect = 0.061, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Query: 25 ENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKTYGCGSAIASSSLVTEWVKGKSLD 83 E +G+ G CGDV++L + ++ G + + ++ CG+ +A+ S V+E V L Sbjct: 29 EGGATGVAGTRLCGDVVRLTLALDPSGQRVAEVGWEAEACGATLAACSAVSELVADAPLL 88 Query: 84 EAQAIKNTDIAEEL-ELPPVKIHCSILAEDAI 114 + I +A+ L L K H + L DA+ Sbjct: 89 DVARIGAHQVADALGGLSAGKFHAAELVADAL 120 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochon... 190 1e-47 UniRef50_Q48M04 FeS cluster assembly scaffold IscU n=27 Tax=Bact... 187 1e-46 UniRef50_Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitoch... 186 2e-46 UniRef50_Q9UTC6 Iron sulfur cluster assembly protein 1, mitochon... 183 2e-45 UniRef50_Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochon... 181 6e-45 UniRef50_Q6FJY3 Iron sulfur cluster assembly protein 1, mitochon... 181 7e-45 UniRef50_A8B887 NifU-like protein n=3 Tax=Giardia intestinalis R... 179 2e-44 UniRef50_B6HTN3 Pc22g17800 protein n=15 Tax=Leotiomyceta RepID=B... 179 2e-44 UniRef50_Q2RHY6 Nitrogen-fixing NifU-like n=3 Tax=Clostridia Rep... 171 6e-42 UniRef50_D1B842 FeS cluster assembly scaffold protein NifU n=51 ... 167 8e-41 UniRef50_B3L9M4 NifU protein, putative n=3 Tax=Plasmodium RepID=... 166 1e-40 UniRef50_D2V9S9 Fe-S cluster biogenesis scaffold protein n=1 Tax... 166 2e-40 UniRef50_Q5CXH7 IscU-like NifU protein, iron-sulfur protein n=15... 166 2e-40 UniRef50_B6KMM5 NifU protein, putative n=4 Tax=Toxoplasma gondii... 161 6e-39 UniRef50_A8ZVA4 Nitrogen-fixing NifU domain protein n=5 Tax=cell... 161 7e-39 UniRef50_D1YVK9 Putative iron sulfur cluster assembly protein n=... 159 2e-38 UniRef50_O67045 NifU-like protein n=9 Tax=Bacteria RepID=NIFU_AQUAE 159 2e-38 UniRef50_B0VFT7 Putative iron-sulfur cluster assembly scaffold (... 158 5e-38 UniRef50_UPI000023F408 hypothetical protein FG02624.1 n=1 Tax=Gi... 157 1e-37 UniRef50_B8CWH6 Nitrogen-fixing NifU domain protein n=8 Tax=cell... 156 2e-37 UniRef50_UPI0000E4A7B0 PREDICTED: similar to NifU-like protein n... 156 2e-37 UniRef50_B5Y9N0 NifU protein n=11 Tax=cellular organisms RepID=B... 155 6e-37 UniRef50_Q0CL81 Iron sulfur cluster assembly protein 1, mitochon... 153 1e-36 UniRef50_Q2RIL0 Nitrogen-fixing NifU-like n=5 Tax=Clostridia Rep... 151 6e-36 UniRef50_Q2LWE9 NifU-like protein involved in Fe-S cluster forma... 151 9e-36 UniRef50_Q4FWA8 Iron-sulfur cluster assembly protein, putative n... 150 1e-35 UniRef50_C9ZYX3 Iron-sulfur cluster assembly protein, putative n... 149 2e-35 UniRef50_C7PDA7 Nitrogen-fixing NifU domain protein n=1 Tax=Chit... 148 4e-35 UniRef50_P05340 Nitrogen fixation protein nifU n=15 Tax=cellular... 147 9e-35 UniRef50_B1L5A7 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 146 2e-34 UniRef50_B8EJ14 Fe-S cluster assembly protein NifU n=6 Tax=Prote... 145 4e-34 UniRef50_C5BTF8 Fe-S cluster assembly protein NifU n=4 Tax=Prote... 145 4e-34 UniRef50_P05343 Nitrogen fixation protein nifU n=7 Tax=Bacteria ... 144 1e-33 UniRef50_B8I3D6 FeS cluster assembly scaffold protein NifU n=30 ... 143 1e-33 UniRef50_B5IVA4 NifU-like N terminal domain protein n=1 Tax=Ther... 141 6e-33 UniRef50_A1AQD6 Nitrogen-fixing NifU domain protein n=1 Tax=Pelo... 140 2e-32 UniRef50_A4J289 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 140 2e-32 UniRef50_P20628 Nitrogen fixation protein nifU n=46 Tax=Bacteria... 138 6e-32 UniRef50_Q74DA8 NifU-like domain protein n=1 Tax=Geobacter sulfu... 138 8e-32 UniRef50_D1C3Z4 SUF system FeS assembly protein, NifU family n=2... 137 9e-32 UniRef50_C7I512 SUF system FeS assembly protein, NifU family n=1... 134 1e-30 UniRef50_B4SCB5 Nitrogen-fixing NifU domain protein n=11 Tax=Bac... 134 1e-30 UniRef50_A5FQV7 Nitrogen-fixing NifU domain protein n=5 Tax=Deha... 132 3e-30 UniRef50_Q39WZ1 Fe-S cluster assembly protein NifU n=33 Tax=cell... 132 3e-30 UniRef50_A5UR74 SUF system FeS assembly protein, NifU family n=6... 131 5e-30 UniRef50_Q4UGE0 RNaseP-like protein with Nifu domain, putative n... 131 6e-30 UniRef50_B3E6H1 Nitrogen-fixing NifU domain protein n=1 Tax=Geob... 131 9e-30 UniRef50_B6IR40 SUF system FeS assembly protein, NifU family n=2... 129 2e-29 UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubro... 129 2e-29 UniRef50_D1JBD9 Putative NifU-like protein n=2 Tax=uncultured ar... 129 3e-29 UniRef50_B8HK33 SUF system FeS assembly protein, NifU family n=2... 129 3e-29 UniRef50_B6QUS0 Iron-sulfur cofactor synthesis protein (Isu1), p... 129 3e-29 UniRef50_A1SV02 SUF system FeS assembly protein, NifU family pro... 129 3e-29 UniRef50_B6BSS9 SUF system FeS assembly protein, NifU family n=3... 127 1e-28 UniRef50_C1XI12 SUF system FeS assembly protein, NifU family n=2... 126 1e-28 UniRef50_B3T2T4 Putative NifU-like N terminal domain protein n=1... 126 2e-28 UniRef50_B0R7Y3 Iron-sulfur cluster assembly protein n=5 Tax=Hal... 126 2e-28 UniRef50_B2GCP7 Nitrogen fixation protein n=69 Tax=Bacilli RepID... 125 4e-28 UniRef50_O32163 NifU-like protein n=159 Tax=Bacillales RepID=NIF... 125 4e-28 UniRef50_A7NG60 SUF system FeS assembly protein, NifU family n=2... 125 5e-28 UniRef50_A5EYF1 SUF system FeS assembly protein, NifU family n=2... 125 5e-28 UniRef50_O09257 NifU n=13 Tax=Bacteria RepID=O09257_CYAP8 125 6e-28 UniRef50_C9A1I3 SUF system FeS assembly protein n=2 Tax=Firmicut... 124 8e-28 UniRef50_C7NMT9 SUF system FeS assembly protein, NifU family n=7... 124 1e-27 UniRef50_Q0F1C8 Putative uncharacterized protein n=1 Tax=Maripro... 123 2e-27 UniRef50_B3DY81 NifU-like protein involved in Fe-S cluster forma... 123 2e-27 UniRef50_C7DI52 SUF system FeS assembly protein, NifU family n=1... 123 2e-27 UniRef50_B9XEV1 Nitrogen-fixing NifU domain protein n=2 Tax=Verr... 122 3e-27 UniRef50_B4D357 SUF system FeS assembly protein, NifU family n=4... 122 4e-27 UniRef50_B9L9A8 NifU family protein n=6 Tax=Epsilonproteobacteri... 121 7e-27 UniRef50_Q2JCF1 SUF system FeS assembly protein n=86 Tax=Actinob... 120 1e-26 UniRef50_A6LUJ3 SUF system FeS assembly protein, NifU family n=5... 120 1e-26 UniRef50_A0RRI4 Nitrogen fixation protein NifU n=55 Tax=cellular... 120 1e-26 UniRef50_Q1AZN5 SUF system FeS assembly protein n=1 Tax=Rubrobac... 119 2e-26 UniRef50_A1AQB7 Nitrogen-fixing NifU domain protein n=1 Tax=Pelo... 119 3e-26 UniRef50_UPI0001746083 putative FeS assembly protein n=1 Tax=Ver... 118 4e-26 UniRef50_Q2JUE7 SUF system FeS assembly protein, NifU family n=6... 118 5e-26 UniRef50_Q04QC7 NifU related protein associated with Fe-S cluste... 118 5e-26 UniRef50_C1I2Y9 SUF system FeS assembly protein n=2 Tax=Clostrid... 118 6e-26 UniRef50_D1JAT5 NifU-like protein n=2 Tax=uncultured archaeon Re... 118 8e-26 UniRef50_B6J805 IscU n=24 Tax=Bacteria RepID=B6J805_COXB1 117 9e-26 UniRef50_A8YU52 NifU-like protein n=4 Tax=Lactobacillus RepID=A8... 117 1e-25 UniRef50_Q1JIL3 IscU protein n=65 Tax=Bacilli RepID=Q1JIL3_STRPD 117 1e-25 UniRef50_D1CFT0 Nitrogen-fixing NifU domain protein n=1 Tax=Ther... 117 1e-25 UniRef50_C5CEE1 SUF system FeS assembly protein, NifU family n=1... 116 1e-25 UniRef50_C7M3C8 SUF system FeS assembly protein, NifU family n=1... 116 2e-25 UniRef50_Q3A8K8 NifU-like protein n=3 Tax=Desulfuromonadales Rep... 116 2e-25 UniRef50_B0K2I6 SUF system FeS assembly protein, NifU family n=1... 116 2e-25 UniRef50_D2QWB8 SUF system FeS assembly protein, NifU family n=2... 116 2e-25 UniRef50_Q02X70 NifU-like protein for Fe-S cluster formation n=2... 115 3e-25 UniRef50_A9W9Z0 Nitrogen-fixing NifU domain protein n=3 Tax=Chlo... 114 7e-25 UniRef50_A7H8S0 SUF system FeS assembly protein, NifU family n=3... 114 1e-24 UniRef50_Q1ATZ0 SUF system FeS assembly protein n=2 Tax=Bacteria... 113 1e-24 UniRef50_Q07HZ2 Nitrogen-fixing NifU domain protein n=7 Tax=Rhod... 113 2e-24 UniRef50_A9NHI3 SUF system FeS cluster assembly protein n=10 Tax... 113 3e-24 UniRef50_B1ML97 Similarity with Nitrogen-fixing NifU-like protei... 113 3e-24 UniRef50_UPI0001C31C45 nitrogen-fixing NifU domain protein n=1 T... 112 3e-24 UniRef50_C1ZK76 Iron-sulfur cluster biosynthesis protein, NifU-l... 112 3e-24 UniRef50_Q1WR14 IscU protein n=10 Tax=Lactobacillus RepID=Q1WR14... 112 3e-24 UniRef50_Q1DD56 SUF system FeS assembly protein, NifU family n=2... 112 3e-24 UniRef50_A8DR52 NifU n=1 Tax=uncultured bacterium RepID=A8DR52_9... 112 4e-24 UniRef50_Q023P2 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 112 4e-24 UniRef50_Q03A02 Fe-S cluster formation protein, NifU-like n=8 Ta... 111 5e-24 UniRef50_C8X380 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 111 9e-24 UniRef50_Q9X192 NifU-like protein n=8 Tax=Thermotogaceae RepID=N... 110 1e-23 UniRef50_A0QX03 SUF system FeS assembly protein, NifU family pro... 110 1e-23 UniRef50_A9BJG9 SUF system FeS assembly protein, NifU family n=1... 110 1e-23 UniRef50_C5NYL7 SUF system FeS assembly protein, NifU family n=1... 110 2e-23 UniRef50_B0S0D2 Iron-sulfur cofactor synthesis protein NifU homo... 109 2e-23 UniRef50_A9A1A8 SUF system FeS assembly protein, NifU family n=4... 109 2e-23 UniRef50_B7EPE4 cDNA clone:J013066C15, full insert sequence n=1 ... 109 2e-23 UniRef50_Q21XB3 SUF system FeS assembly protein n=6 Tax=Bacteria... 109 3e-23 UniRef50_B9L0V2 NifU family protein n=1 Tax=Thermomicrobium rose... 109 3e-23 UniRef50_Q3JQE2 SUF system FeS assembly protein, NifU family n=3... 109 4e-23 UniRef50_C4Z7J6 Nitrogen fixation protein NifU-like protein n=10... 108 6e-23 UniRef50_A0LFU2 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 108 8e-23 UniRef50_B8FAZ4 Nitrogen-fixing NifU domain protein n=2 Tax=Desu... 107 9e-23 UniRef50_B8CH94 FeS assembly protein n=1 Tax=Shewanella piezotol... 107 1e-22 UniRef50_C6C1H8 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 107 1e-22 UniRef50_A5D4Q3 NifU homolog n=1 Tax=Pelotomaculum thermopropion... 106 2e-22 UniRef50_D1C3Y7 Nitrogen-fixing NifU domain protein n=1 Tax=Spha... 105 4e-22 UniRef50_B7K023 SUF system FeS assembly protein, NifU family n=2... 105 5e-22 UniRef50_C0WNL2 Iron-sulfur (Fe-S) cluster formation protein Isc... 105 5e-22 UniRef50_C3RKP2 SUF system FeS cluster assembly protein n=6 Tax=... 104 8e-22 UniRef50_A6Q975 Putative uncharacterized protein n=1 Tax=Sulfuro... 104 9e-22 UniRef50_B9KY40 NifU family protein n=1 Tax=Thermomicrobium rose... 104 9e-22 UniRef50_B8FN62 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 103 2e-21 UniRef50_C9KQH6 SUF system FeS assembly protein, NifU family n=1... 103 2e-21 UniRef50_C8P0L7 NifU domain protein n=2 Tax=Erysipelotrichaceae ... 102 3e-21 UniRef50_C1AC48 Iron-sulfur cluster biosynthesis protein n=1 Tax... 102 4e-21 UniRef50_D1AKY8 SUF system FeS assembly protein, NifU family n=6... 101 6e-21 UniRef50_A9KE69 IscU n=6 Tax=Coxiella burnetii RepID=A9KE69_COXBN 101 6e-21 UniRef50_C1VDX7 Cysteine desulfurase n=2 Tax=Halobacteriaceae Re... 101 7e-21 UniRef50_B5JY19 FeS cluster assembly scaffold IscU n=1 Tax=gamma... 101 1e-20 UniRef50_Q1IN98 Nitrogen-fixing NifU-like n=1 Tax=Candidatus Kor... 101 1e-20 UniRef50_C6MSR1 Nitrogen-fixing NifU domain protein n=1 Tax=Geob... 101 1e-20 UniRef50_C0QAY3 Predicted iron-sulfur cluster assembly protein (... 100 1e-20 UniRef50_B8FDL0 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 100 2e-20 UniRef50_A5ICQ0 NifU family iron binding protein, [Fe-S] cluster... 100 2e-20 UniRef50_Q60A81 NifU family protein n=1 Tax=Methylococcus capsul... 99 2e-20 UniRef50_B8FIH0 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 99 4e-20 UniRef50_A1ZYV1 SUF system FeS assembly protein, NifU family n=1... 99 4e-20 UniRef50_A4EB20 Putative uncharacterized protein n=1 Tax=Collins... 98 6e-20 UniRef50_Q8F7C7 NifU-like protein n=6 Tax=Leptospira RepID=Q8F7C... 98 6e-20 UniRef50_Q1J1X4 SUF system FeS assembly protein n=4 Tax=Deinococ... 98 7e-20 UniRef50_Q2LWF0 NifU-like protein involved in Fe-S cluster forma... 98 7e-20 UniRef50_A8F547 Nitrogen-fixing NifU domain protein n=1 Tax=Ther... 98 8e-20 UniRef50_A0LFS6 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 98 1e-19 UniRef50_Q7MYK4 Similarities with nitrogen fixation proteins n=2... 97 2e-19 UniRef50_Q98AM0 Nitrogen fixation protein; NifU n=2 Tax=Mesorhiz... 96 3e-19 UniRef50_Q6APN8 Related to nitrogen fixation protein (NifU) n=1 ... 95 5e-19 UniRef50_A6Q4J9 Putative uncharacterized protein n=1 Tax=Nitrati... 95 6e-19 UniRef50_D2EEV4 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 95 7e-19 UniRef50_C0GTN3 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 93 2e-18 UniRef50_A8PKG9 NifU-like protein, putative n=1 Tax=Brugia malay... 93 2e-18 UniRef50_C7DHB6 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 92 6e-18 UniRef50_A8ZSW4 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 90 2e-17 UniRef50_Q01180 Nitrogen fixation protein nifU n=6 Tax=Rhodobact... 89 4e-17 UniRef50_A1WM67 Nitrogen-fixing NifU domain protein n=1 Tax=Verm... 89 4e-17 UniRef50_Q65JA1 Fe-S cluster formation protein n=3 Tax=Bacillus ... 89 5e-17 UniRef50_A0LNT2 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 89 5e-17 UniRef50_D2RA02 SUF system FeS assembly protein, NifU family n=1... 87 2e-16 UniRef50_C8WNS3 Nitrogen-fixing NifU domain protein n=3 Tax=Cori... 86 2e-16 UniRef50_A8S193 Putative uncharacterized protein n=1 Tax=Clostri... 86 4e-16 UniRef50_B1VAA5 NifU homolog n=3 Tax=Candidatus Phytoplasma RepI... 85 7e-16 UniRef50_B1AJ94 SUF system FeS assembly protein, NifU family n=1... 80 2e-14 UniRef50_C4XEA9 Putative uncharacterized protein n=1 Tax=Mycopla... 80 3e-14 UniRef50_Q0YR11 Nitrogen-fixing NifU-like:BFD-like (2Fe-2S)-bind... 79 5e-14 UniRef50_C0D022 Putative uncharacterized protein n=1 Tax=Clostri... 78 8e-14 UniRef50_D2LAE9 Nitrogen-fixing NifU domain protein n=2 Tax=Desu... 78 1e-13 UniRef50_Q98R36 NITROGEN FIXATION PROTEIN NIFU n=1 Tax=Mycoplasm... 75 6e-13 UniRef50_Q6MEW2 Putative iron-sulfur cluster assembly protein ni... 72 4e-12 Sequences not found previously or not previously below threshold: UniRef50_Q0AAQ4 SUF system FeS assembly protein, NifU family n=5... 104 1e-21 UniRef50_Q04EW3 Fe-S cluster formation protein, NifU-like n=1 Ta... 98 7e-20 UniRef50_C9LR10 SUF system FeS assembly protein, NifU family n=1... 97 1e-19 UniRef50_Q03UL7 Fe-S cluster formation protein, NifU-like n=2 Ta... 97 1e-19 UniRef50_C0VZ96 Possible iron-sulfur (Fe-S) cluster formation pr... 97 2e-19 UniRef50_B8DUN6 SUF system FeS assembly protein, NifU family n=1... 97 2e-19 UniRef50_Q03GT9 Fe-S cluster formation protein, NifU-like n=3 Ta... 95 9e-19 UniRef50_D0RPD7 SUF system FeS assembly protein, NifU family n=1... 93 2e-18 UniRef50_B1MVR5 NifU-like protein n=1 Tax=Leuconostoc citreum KM... 93 2e-18 UniRef50_C7MD35 SUF system FeS assembly protein, NifU family n=1... 93 3e-18 UniRef50_C8W9P1 SUF system FeS assembly protein, NifU family n=6... 93 3e-18 UniRef50_B0RG88 NifU-like protein n=2 Tax=Clavibacter michiganen... 88 6e-17 UniRef50_B7GS89 SUF system FeS assembly protein, NifU family n=7... 88 8e-17 UniRef50_D2MQI8 SUF system FeS assembly protein, NifU family n=1... 87 1e-16 UniRef50_C7ML19 SUF system FeS assembly protein, NifU family n=6... 86 2e-16 UniRef50_Q0BSI3 IscU protein n=1 Tax=Granulibacter bethesdensis ... 86 2e-16 UniRef50_B2S3K5 Nitrogen fixation protein n=4 Tax=Treponema RepI... 86 3e-16 UniRef50_A6WDQ7 SUF system FeS assembly protein, NifU family n=1... 85 6e-16 UniRef50_Q14L11 Putative iron-sulfur cluster assembly protein n=... 85 9e-16 UniRef50_UPI000050F718 SUF system FeS assembly protein n=1 Tax=B... 84 2e-15 UniRef50_Q048H8 Fe-S cluster formation protein, NifU-like n=2 Ta... 83 3e-15 UniRef50_C2BX07 Possible iron-sulfur (Fe-S) cluster formation pr... 82 5e-15 UniRef50_Q1AXD4 Nitrogen-fixing NifU-like protein n=1 Tax=Rubrob... 82 6e-15 UniRef50_C7JBP3 NifU family SUF system FeS assembly protein n=8 ... 80 3e-14 UniRef50_B3R0D5 NifU-like protein n=1 Tax=Candidatus Phytoplasma... 78 9e-14 UniRef50_B5JQP0 Putative uncharacterized protein n=1 Tax=Verruco... 76 3e-13 UniRef50_Q7NBI8 Putative uncharacterized protein n=1 Tax=Mycopla... 76 3e-13 UniRef50_C0QB63 Putative nitrogen fixation protein NifU (NifU-li... 76 4e-13 UniRef50_Q0A8C0 Nitrogen-fixing NifU domain protein n=1 Tax=Alka... 75 6e-13 UniRef50_A5G0T1 SUF system FeS assembly protein, NifU family n=2... 75 7e-13 UniRef50_C6N0B9 NifU family iron binding protein n=2 Tax=Legione... 75 8e-13 UniRef50_A0JUB0 SUF system FeS assembly protein, NifU family n=6... 74 2e-12 UniRef50_Q8EV25 Nitrogen fixation protein NifU n=1 Tax=Mycoplasm... 73 2e-12 UniRef50_C5BVY5 SUF system FeS assembly protein, NifU family n=1... 72 4e-12 UniRef50_C4XLN0 Nitrogen-fixing NifU-like N-terminal domain prot... 72 5e-12 UniRef50_A6GEC3 Putative uncharacterized protein n=1 Tax=Plesioc... 72 6e-12 UniRef50_C7MLZ4 NifU-like protein n=1 Tax=Cryptobacterium curtum... 71 2e-11 UniRef50_UPI00017430E0 nitrogen fixation protein (nifU) n=1 Tax=... 70 3e-11 UniRef50_Q6KIL2 Aminotransferase protein U homolog n=1 Tax=Mycop... 66 3e-10 UniRef50_C6XNB0 Nitrogen-fixing NifU domain protein n=1 Tax=Hirs... 66 3e-10 UniRef50_Q134L6 NifU-like protein n=68 Tax=Alphaproteobacteria R... 64 2e-09 UniRef50_Q4A687 Nitrogen fixation protein NifU n=2 Tax=Mycoplasm... 63 2e-09 UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)... 63 2e-09 UniRef50_B2IBC3 Nitrogen-fixing NifU domain protein n=23 Tax=Alp... 62 7e-09 UniRef50_Q3KKX4 NifU n=8 Tax=Chlamydia RepID=Q3KKX4_CHLTA 61 8e-09 UniRef50_B6BJX3 Putative NifU-like N terminal domain protein n=1... 61 8e-09 UniRef50_B0RHZ4 Putative uncharacterized protein n=2 Tax=Claviba... 61 1e-08 UniRef50_B3PM56 IscU, NifU-like protein involved in Fe-S cluster... 60 2e-08 UniRef50_B8EQR5 Nitrogen-fixing NifU domain protein n=2 Tax=Rhiz... 58 8e-08 UniRef50_Q256A8 NifU-related protein n=7 Tax=Chlamydophila RepID... 56 5e-07 UniRef50_C6ADY4 Nitrogen-fixing NifU-like protein n=5 Tax=Barton... 55 8e-07 UniRef50_A8TRY7 Putative uncharacterized protein n=1 Tax=alpha p... 55 1e-06 UniRef50_Q3A7R9 NifU-like protein n=2 Tax=Desulfuromonadales Rep... 54 2e-06 UniRef50_Q6MTA6 NITROGEN FIXATION PROTEIN NIFU n=4 Tax=Mollicute... 54 2e-06 UniRef50_A3UF02 NifU-related protein involved in Fe-S cluster fo... 53 3e-06 UniRef50_B4RE93 NifU-like protein involved in Fe-S cluster forma... 53 3e-06 UniRef50_Q5P5Y4 Possible NifU homolog n=1 Tax=Aromatoleum aromat... 53 3e-06 UniRef50_D0WJI3 Putative type I restriction-modification system,... 52 5e-06 UniRef50_P47579 Uncharacterized protein MG337 n=1 Tax=Mycoplasma... 52 6e-06 UniRef50_Q1V286 NifU-like N terminal domain protein n=2 Tax=Cand... 52 6e-06 UniRef50_D1J7R1 Aminotransferase protein U homolog (Nitrogenfixa... 51 9e-06 UniRef50_A4WRP9 NifU-like protein n=20 Tax=Rhodobacterales RepID... 50 3e-05 UniRef50_Q0FGM6 NifU-related protein involved in Fe-S cluster fo... 50 3e-05 UniRef50_Q30UA2 Putative uncharacterized protein n=1 Tax=Sulfuri... 50 3e-05 UniRef50_B1VA18 NifU homolog involved in Fe-S cluster formation ... 49 4e-05 UniRef50_B0S9Z7 NifU related protein associated with Fe-S cluste... 49 4e-05 UniRef50_UPI0000D53F18 NifU-like N terminal domain n=1 Tax=Psych... 49 5e-05 UniRef50_B0T0Z9 Nitrogen-fixing NifU domain protein n=2 Tax=Alph... 48 1e-04 UniRef50_Q4AAG9 Putative uncharacterized protein n=5 Tax=Mycopla... 47 2e-04 UniRef50_D0XJK8 NifU-like protein involved in Fe-S cluster forma... 47 2e-04 UniRef50_A5V259 NifU-like involved in Fe-S cluster formation n=2... 47 2e-04 UniRef50_B6BGH4 Putative NifU-like N terminal domain protein n=1... 46 3e-04 UniRef50_A5IXL2 Nitrogen fixation protein NifU n=1 Tax=Mycoplasm... 46 4e-04 UniRef50_C7LUF1 Putative uncharacterized protein n=1 Tax=Desulfo... 45 9e-04 UniRef50_C5TE59 NifU-like involved in Fe-S cluster formation n=3... 44 0.001 UniRef50_A8TTN5 Nitrogen-fixing NifU-like protein n=2 Tax=alpha ... 44 0.001 UniRef50_C9RNY8 Nitrogen-fixing NifU domain protein n=1 Tax=Fibr... 44 0.001 UniRef50_Q2NAI2 Fe-S cluster formation protein n=1 Tax=Erythroba... 44 0.002 >UniRef50_Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochondrial n=82 Tax=cellular organisms RepID=ISU1_YARLI Length = 181 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 93/127 (73%), Positives = 111/127 (87%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y EKV+DHY NPRNVGS + NDE+VG+G+VGAPACGDVMKLQI+V+D G+I+D +FKT+ Sbjct: 36 GYHEKVLDHYNNPRNVGSMNKNDEDVGTGLVGAPACGDVMKLQIRVDDNGVIQDVKFKTF 95 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS VTE V+GKSL EA IKNT IA+EL LPPVK+HCS+LAEDAIK+AI+DY Sbjct: 96 GCGSAIASSSYVTELVRGKSLAEAGKIKNTVIAKELSLPPVKLHCSMLAEDAIKSAISDY 155 Query: 122 KSKREAK 128 SKR+ K Sbjct: 156 NSKRKTK 162 >UniRef50_Q48M04 FeS cluster assembly scaffold IscU n=27 Tax=Bacteria RepID=Q48M04_PSE14 Length = 128 Score = 187 bits (475), Expect = 1e-46, Method: Composition-based stats. Identities = 99/125 (79%), Positives = 114/125 (91%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MAYSEKVIDHYENPRNVG + D +VG+GMVGAPACGDVM+LQIKVN++G+IEDA+FKT Sbjct: 1 MAYSEKVIDHYENPRNVGKMNAEDPDVGTGMVGAPACGDVMRLQIKVNEQGVIEDAKFKT 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 YGCGSAIASSSL TEW+KGK+LDEA+ IKNT +AEEL LPPVKIHCS+LAEDAIKAA+ D Sbjct: 61 YGCGSAIASSSLATEWMKGKTLDEAETIKNTQLAEELALPPVKIHCSVLAEDAIKAAVRD 120 Query: 121 YKSKR 125 YK K+ Sbjct: 121 YKQKK 125 >UniRef50_Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial n=633 Tax=root RepID=ISCU_HUMAN Length = 167 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 95/126 (75%), Positives = 113/126 (89%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +KV+DHYENPRNVGS D +NVG+G+VGAPACGDVMKLQI+V+++G I DARFKT+G Sbjct: 35 YHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFG 94 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSSL TEWVKGK+++EA IKNTDIA+EL LPPVK+HCS+LAEDAIKAA+ADYK Sbjct: 95 CGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYK 154 Query: 123 SKREAK 128 K+E K Sbjct: 155 LKQEPK 160 >UniRef50_Q9UTC6 Iron sulfur cluster assembly protein 1, mitochondrial n=5 Tax=Dikarya RepID=ISU1_SCHPO Length = 192 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 81/124 (65%), Positives = 101/124 (81%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + V+DHY NPRNVG+ D +VG G+VGAPACGDVM+L I+VN +G+IED +FKT+ Sbjct: 53 MYHKNVLDHYNNPRNVGTLPKGDPDVGIGLVGAPACGDVMRLAIRVNKDGVIEDVKFKTF 112 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS VT VKG +L+EA IKNT IA+EL LPPVK+HCS+LAEDAIK+A+ Y Sbjct: 113 GCGSAIASSSYVTTMVKGMTLEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVKHY 172 Query: 122 KSKR 125 +SK+ Sbjct: 173 RSKQ 176 >UniRef50_Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochondrial n=6 Tax=Dikarya RepID=ISU1_KLULA Length = 180 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 91/124 (73%), Positives = 108/124 (87%), Gaps = 1/124 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 Y KVIDHY NPRNVGS D N NVG+G+VGAPACGDVMKLQI+VNDE G+IE+ +FKT+ Sbjct: 51 YHPKVIDHYTNPRNVGSLDKNLPNVGTGLVGAPACGDVMKLQIQVNDETGVIENVKFKTF 110 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS +TE V+GK+L++A IKNT+IA EL LPPVK+HCS+LAEDAIKAAI DY Sbjct: 111 GCGSAIASSSYMTELVRGKTLEDAAKIKNTEIARELSLPPVKLHCSMLAEDAIKAAIKDY 170 Query: 122 KSKR 125 ++KR Sbjct: 171 QAKR 174 >UniRef50_Q6FJY3 Iron sulfur cluster assembly protein 1, mitochondrial n=3 Tax=Dikarya RepID=ISU1_CANGA Length = 213 Score = 181 bits (459), Expect = 7e-45, Method: Composition-based stats. Identities = 90/127 (70%), Positives = 106/127 (83%), Gaps = 1/127 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKT 60 Y KVI+HY +PRNVGS D NVG+G+VGAPACGDVM+LQIKVND+ G+IED +FKT Sbjct: 82 MYHPKVIEHYTHPRNVGSMDKTLPNVGTGLVGAPACGDVMRLQIKVNDKTGVIEDVKFKT 141 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIASSS +TE V G +LD+A IKNT IA+EL LPPVK+HCS+LAEDAIKAAI D Sbjct: 142 FGCGSAIASSSYMTELVHGMTLDDAAKIKNTTIAKELSLPPVKLHCSMLAEDAIKAAIKD 201 Query: 121 YKSKREA 127 YKSKR + Sbjct: 202 YKSKRTS 208 >UniRef50_A8B887 NifU-like protein n=3 Tax=Giardia intestinalis RepID=A8B887_GIALA Length = 212 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 82/126 (65%), Positives = 105/126 (83%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE + HY P N+G+ D++DE+VGSG+VGAPACGDVM+LQIKV D+G I +A+FKT+G Sbjct: 80 YSELAMQHYRTPVNIGTLDDDDEHVGSGLVGAPACGDVMRLQIKVGDDGKISEAKFKTFG 139 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CG+AIASSS T ++GKSL+EA IKNTDI+++L LPPVK+HCS+LAEDAI+ AI DYK Sbjct: 140 CGAAIASSSYATSLLQGKSLEEASQIKNTDISDKLGLPPVKLHCSVLAEDAIRQAIDDYK 199 Query: 123 SKREAK 128 KR +K Sbjct: 200 RKRGSK 205 >UniRef50_B6HTN3 Pc22g17800 protein n=15 Tax=Leotiomyceta RepID=B6HTN3_PENCW Length = 199 Score = 179 bits (454), Expect = 2e-44, Method: Composition-based stats. Identities = 87/124 (70%), Positives = 105/124 (84%), Gaps = 1/124 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 Y EKV+DHY NPRNVGS D++VG+G+VGAPACGDVMKLQI+VN D G I+D FKT Sbjct: 47 GYHEKVLDHYNNPRNVGSMKKGDQDVGTGLVGAPACGDVMKLQIRVNKDSGRIDDVVFKT 106 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIASSS +TE V+G +LDEA IKNTD+A+EL LPPVK+HCS+LAEDAIK+AIA+ Sbjct: 107 FGCGSAIASSSYLTELVRGMTLDEAGKIKNTDVAKELCLPPVKLHCSMLAEDAIKSAIAN 166 Query: 121 YKSK 124 Y +K Sbjct: 167 YYTK 170 >UniRef50_Q2RHY6 Nitrogen-fixing NifU-like n=3 Tax=Clostridia RepID=Q2RHY6_MOOTA Length = 125 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 73/126 (57%), Positives = 95/126 (75%), Gaps = 5/126 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEKV+DH+ NPRNVG +N D G G VG P CGD+M+L IKV D GII+D +FKT+ Sbjct: 1 MYSEKVMDHFTNPRNVGEIENAD---GVGQVGNPVCGDIMRLYIKVED-GIIKDVKFKTF 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCG+AIA+SS+VTE VKGK+++EA I N +AE L+ LPP K+HCS LA DA+ AI D Sbjct: 57 GCGAAIATSSMVTEMVKGKTVEEALKISNAAVAEALDGLPPQKMHCSNLAADALHKAIED 116 Query: 121 YKSKRE 126 Y+++ + Sbjct: 117 YQNRNK 122 >UniRef50_D1B842 FeS cluster assembly scaffold protein NifU n=51 Tax=cellular organisms RepID=D1B842_THEAS Length = 150 Score = 167 bits (424), Expect = 8e-41, Method: Composition-based stats. Identities = 69/129 (53%), Positives = 92/129 (71%), Gaps = 5/129 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MAYSEKV+ ++ NP NVG + D G G VG P CGDVMK+ +++ D G IED RF+T Sbjct: 1 MAYSEKVVQYFMNPVNVGELPDPD---GVGEVGNPKCGDVMKIYLRIRD-GKIEDVRFQT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIA 119 +GC +AIA+SS+VTE VKGK++DEA + N D+AE LPP K+HCS+LAE I+AAI Sbjct: 57 FGCAAAIATSSMVTEMVKGKTIDEALNVTNKDVAEALGGLPPEKVHCSLLAEQGIRAAIE 116 Query: 120 DYKSKREAK 128 DY ++ + Sbjct: 117 DYLRRQRGE 125 >UniRef50_B3L9M4 NifU protein, putative n=3 Tax=Plasmodium RepID=B3L9M4_PLAKH Length = 170 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 77/123 (62%), Positives = 98/123 (79%), Gaps = 1/123 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 +YS+ V DH+ PRNVGSFD N++N+G+ +VG +CGDV+KLQ+K+ D +I+DARF + Sbjct: 46 SYSDHVKDHFNKPRNVGSFDKNEKNIGTSIVGKASCGDVIKLQLKIEDN-VIKDARFMAF 104 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS TE +KGK++DEA IKN DIA L LPPVKIHCS+LAEDAIK AI +Y Sbjct: 105 GCGSAIASSSYATELIKGKTIDEALKIKNNDIASHLSLPPVKIHCSLLAEDAIKHAIKNY 164 Query: 122 KSK 124 + K Sbjct: 165 REK 167 >UniRef50_D2V9S9 Fe-S cluster biogenesis scaffold protein n=1 Tax=Naegleria gruberi RepID=D2V9S9_NAEGR Length = 179 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 74/120 (61%), Positives = 92/120 (76%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+KVIDH++NPRN GS D D NVG+ +VGAP+CGDV+K QI V+D G + DA+FK +G Sbjct: 40 YSDKVIDHHKNPRNSGSLDAKDANVGTALVGAPSCGDVLKFQILVDDNGKVIDAKFKAFG 99 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSS TE VKGK++++ I N DIA L LPPVK HCS+LAE+AI+ A DY Sbjct: 100 CGSAIASSSYATELVKGKTIEDCMMITNNDIASHLSLPPVKKHCSLLAEEAIRKATEDYM 159 >UniRef50_Q5CXH7 IscU-like NifU protein, iron-sulfur protein n=15 Tax=cellular organisms RepID=Q5CXH7_CRYPV Length = 150 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 72/125 (57%), Positives = 98/125 (78%), Gaps = 1/125 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + YS+ V DH+ NPRNVGS ++D+NVG+ +VG +CGDV+KLQ+ + D GII+DA+FKT Sbjct: 24 LFYSDTVHDHFRNPRNVGSLPSDDKNVGTAVVGKASCGDVVKLQVDIRD-GIIKDAKFKT 82 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIAS+S TE + GK+ +EA I N IA+ L LPP+K+HCS+LAEDAIK AI + Sbjct: 83 FGCGSAIASTSYATELIIGKTTEEALKINNKTIADHLNLPPIKLHCSLLAEDAIKHAIKN 142 Query: 121 YKSKR 125 Y+ K+ Sbjct: 143 YQDKQ 147 >UniRef50_B6KMM5 NifU protein, putative n=4 Tax=Toxoplasma gondii RepID=B6KMM5_TOXGO Length = 219 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 77/128 (60%), Positives = 99/128 (77%), Gaps = 5/128 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN----VGSGMVGAPACGDVMKLQIKVNDEGIIEDARF 58 YS+KV +H+ NP+N G+FD +D VG+ +VG ACGDV+KLQ+ V D G I DARF Sbjct: 66 YSKKVHEHFFNPKNAGAFDLSDPETRSKVGTAVVGKAACGDVIKLQVLVED-GKIRDARF 124 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAI 118 KT+GCGSAIASSS TE +KGK+ D+A +KNTDIAE L LPPVK+HCS+LAEDA++ AI Sbjct: 125 KTFGCGSAIASSSYATELIKGKTCDDALKLKNTDIAEYLNLPPVKVHCSLLAEDAVRHAI 184 Query: 119 ADYKSKRE 126 DY+ K++ Sbjct: 185 LDYQKKQK 192 >UniRef50_A8ZVA4 Nitrogen-fixing NifU domain protein n=5 Tax=cellular organisms RepID=A8ZVA4_DESOH Length = 173 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 65/129 (50%), Positives = 89/129 (68%), Gaps = 5/129 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS+ V+DH+ NPRNVG +N G G VG P CGD+M + + + D+ I D +F+T Sbjct: 1 MIYSKTVMDHFRNPRNVGVIENA---AGVGEVGNPICGDMMTIYLDIQDDR-IADIKFQT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIA 119 +GCGSAIA SS++TE KGK+L+EA+ I N D+AE LE LP K+HCS L DA++ AI Sbjct: 57 FGCGSAIAVSSMLTELAKGKTLEEAKKITNKDVAEALEGLPKNKLHCSNLGADALQMAIK 116 Query: 120 DYKSKREAK 128 DY+ ++ K Sbjct: 117 DYEDRKAGK 125 >UniRef50_D1YVK9 Putative iron sulfur cluster assembly protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YVK9_METPS Length = 151 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 5/128 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS KV+ H+ NP+NVG + D G G VG P CGD+M + IKV D + D +FKT Sbjct: 1 MMYSPKVMQHFSNPQNVGEIPDAD---GVGEVGNPVCGDLMTIYIKVKDNKL-SDIKFKT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 +GC +AIA+SS++T KG +L++A I D+A E LPP K+HCS LA DA+K AI Sbjct: 57 FGCAAAIATSSIITTMAKGMTLEDAVKISRNDVAKELGGLPPQKMHCSNLAADALKLAIE 116 Query: 120 DYKSKREA 127 +Y+ K + Sbjct: 117 NYRRKLQG 124 >UniRef50_O67045 NifU-like protein n=9 Tax=Bacteria RepID=NIFU_AQUAE Length = 157 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 66/125 (52%), Positives = 82/125 (65%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 Y+EKV+DH+ NPRNVG ++ + G G G PACGD M IKVN E +IED RFKT+ Sbjct: 5 YNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTF 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIA SS++TE VKGK + A + DI EE LPP KIHC+ L + + AI D Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKD 121 Query: 121 YKSKR 125 Y K+ Sbjct: 122 YLMKQ 126 >UniRef50_B0VFT7 Putative iron-sulfur cluster assembly scaffold (IscU module) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFT7_9BACT Length = 207 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 5/130 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFK 59 M YS+KV+DH+ +P NVG +N D G+PACGD + + +KV+D+ I D F Sbjct: 1 MQYSQKVLDHFMHPHNVGKMENPD---AVATEGSPACGDQVTVYLKVDDKTKTITDISFL 57 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAI 118 +YGC S IA++S++T+ KGK+L+EA+ I D + L+ LPPVK+HCS+LA D +++AI Sbjct: 58 SYGCASNIATASIITDMAKGKTLEEAKKITWRDAMDALDGLPPVKVHCSVLAADTLQSAI 117 Query: 119 ADYKSKREAK 128 ++Y+ K Sbjct: 118 SNYEIAHGLK 127 >UniRef50_UPI000023F408 hypothetical protein FG02624.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F408 Length = 211 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 82/143 (57%), Positives = 104/143 (72%), Gaps = 20/143 (13%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKT 60 +Y EKV+DHY PRNVGS + D +VG+G+VGAPACGDVMKLQI+V+ E I + +FKT Sbjct: 42 SYHEKVLDHYSRPRNVGSMNKKDADVGTGLVGAPACGDVMKLQIRVDPETQKISEVKFKT 101 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVK----------------- 103 +GCGSAIASSS +TE V+G SLD+A +KNT+IA+EL LPPVK Sbjct: 102 FGCGSAIASSSYLTELVRGMSLDDAGKVKNTEIAKELCLPPVKRTLSHHAAYYIDTQTDF 161 Query: 104 --IHCSILAEDAIKAAIADYKSK 124 +HCS+LAEDAIK+AI+DY +K Sbjct: 162 NIVHCSMLAEDAIKSAISDYYTK 184 >UniRef50_B8CWH6 Nitrogen-fixing NifU domain protein n=8 Tax=cellular organisms RepID=B8CWH6_HALOH Length = 138 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 64/124 (51%), Positives = 85/124 (68%), Gaps = 5/124 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEKV++H+ NPRNVG + D G VG P CGD++KL +K+ D+ IED +FKT+ Sbjct: 1 MYSEKVMEHFNNPRNVGEIKDAD---AVGEVGNPVCGDIIKLYLKIKDD-TIEDIKFKTF 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCG+A+A+SS+VTE VKGK +DEA + +AE L+ LP K+HCS LA DA+ AI Sbjct: 57 GCGAAVATSSMVTELVKGKKIDEALKVSKETVAEALDGLPSNKMHCSNLAADALHKAIKS 116 Query: 121 YKSK 124 Y K Sbjct: 117 YNKK 120 >UniRef50_UPI0000E4A7B0 PREDICTED: similar to NifU-like protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A7B0 Length = 163 Score = 156 bits (394), Expect = 2e-37, Method: Composition-based stats. Identities = 74/128 (57%), Positives = 101/128 (78%), Gaps = 1/128 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKT 60 +Y + VIDHYENPRNVG+ D ND+NVG+G+VGAPACGDVMKLQ++++D+ I++ Sbjct: 31 SYHKNVIDHYENPRNVGAMDKNDKNVGTGLVGAPACGDVMKLQVQISDKKHGIDNVAISD 90 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 GC S +++S T +G +DEA+ IKNTDIA+EL LPPVK+HCS+LAEDAIKAA+ D Sbjct: 91 VGCCSLMSTSMEYTNLCRGMHVDEAKDIKNTDIAKELSLPPVKLHCSMLAEDAIKAALQD 150 Query: 121 YKSKREAK 128 Y+ K+++K Sbjct: 151 YRVKQDSK 158 >UniRef50_B5Y9N0 NifU protein n=11 Tax=cellular organisms RepID=B5Y9N0_COPPD Length = 212 Score = 155 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 59/125 (47%), Positives = 88/125 (70%), Gaps = 5/125 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y+ KVI+H++NP N G +N D +VG+PACGD + + +K+N++ +IED +F++ Sbjct: 3 IKYNPKVIEHFKNPHNQGVIENPD---AEALVGSPACGDQIAIYLKINND-VIEDIKFES 58 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIK-NTDIAEELELPPVKIHCSILAEDAIKAAIA 119 YGC S IA++S+VT+ KGK+L+EA +IK + E LPPVK HCS+LA D ++AAI Sbjct: 59 YGCASNIATASIVTDLAKGKTLEEALSIKWTEAVQELGGLPPVKYHCSVLAVDGLRAAIK 118 Query: 120 DYKSK 124 DY K Sbjct: 119 DYLRK 123 >UniRef50_Q0CL81 Iron sulfur cluster assembly protein 1, mitochondrial n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CL81_ASPTN Length = 179 Score = 153 bits (387), Expect = 1e-36, Method: Composition-based stats. Identities = 78/139 (56%), Positives = 100/139 (71%), Gaps = 21/139 (15%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG----------IIE-- 54 ++DHY NPRNVGS + D +VGSG+VGAPACGDVMKLQI+V+ + II+ Sbjct: 7 LLDHYNNPRNVGSMNRKDLDVGSGLVGAPACGDVMKLQIRVDKDTNTISGTPPPSIIDIM 66 Query: 55 ---------DARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIH 105 D +FKT+GCGSAIASSS +TE V+G +L+EA + N IA+EL LPPVK+H Sbjct: 67 DDPANMLTIDVKFKTFGCGSAIASSSYLTELVRGMTLEEAGKVTNVAIAKELCLPPVKLH 126 Query: 106 CSILAEDAIKAAIADYKSK 124 CS+LAEDAIK+AI+DY +K Sbjct: 127 CSMLAEDAIKSAISDYYTK 145 >UniRef50_Q2RIL0 Nitrogen-fixing NifU-like n=5 Tax=Clostridia RepID=Q2RIL0_MOOTA Length = 139 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 55/127 (43%), Positives = 83/127 (65%), Gaps = 5/127 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + VIDH+ NPRNVG ++ D G G +G P CGD + + IKV D ++ D +F+ + Sbjct: 1 MYGDLVIDHFLNPRNVGRIEDAD---GIGAIGDPGCGDYLCIYIKVRDNRLV-DVKFQVH 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GC +AIA+SS++TE +GK+L+E I + D+A + LP VK+HCS L A+ AI + Sbjct: 57 GCPAAIATSSILTEMARGKTLEEGLRITDADVAAAIGGLPEVKLHCSNLGASALHDAIRN 116 Query: 121 YKSKREA 127 Y++K +A Sbjct: 117 YQAKMQA 123 >UniRef50_Q2LWE9 NifU-like protein involved in Fe-S cluster formation with 2Fe-2S domain n=2 Tax=Bacteria RepID=Q2LWE9_SYNAS Length = 229 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 86/123 (69%), Gaps = 4/123 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++KV +H+ NPRNVG +N D G G VG+ ACGD ++L K+++ I++A+FK++G Sbjct: 4 YTDKVREHFWNPRNVGEVENPD---GIGQVGSLACGDALRLTFKLDENKRIKEAKFKSFG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADY 121 C SAIA++S++TE V G ++++A+ I N DIA LP K+HCS+L E ++ AIA Y Sbjct: 61 CASAIAAASVLTEMVVGLTIEQAEKITNQDIAAALGGLPEQKMHCSVLGEQVLEKAIACY 120 Query: 122 KSK 124 + + Sbjct: 121 RGR 123 >UniRef50_Q4FWA8 Iron-sulfur cluster assembly protein, putative n=9 Tax=Eukaryota RepID=Q4FWA8_LEIMA Length = 161 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 70/123 (56%), Positives = 96/123 (78%), Gaps = 1/123 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 YS+KV DHY+NPRNVG D ND NVG+G+ GAP CGD+ ++Q+KVN + +IED +FK + Sbjct: 20 YSDKVQDHYKNPRNVGKLDKNDPNVGTGLRGAPECGDMTQMQVKVNPDTLVIEDVKFKAF 79 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIA+SS ++ ++GK++ +A + N DIA EL LPPVK+HCS+LAE+ I AA+ +Y Sbjct: 80 GCGSAIAASSYASQAIRGKTVADALKLTNKDIAHELSLPPVKLHCSMLAEETIHAAVENY 139 Query: 122 KSK 124 SK Sbjct: 140 LSK 142 >UniRef50_C9ZYX3 Iron-sulfur cluster assembly protein, putative n=3 Tax=Trypanosoma RepID=C9ZYX3_TRYBG Length = 180 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 69/126 (54%), Positives = 95/126 (75%), Gaps = 1/126 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 YS V +HY NPRNVG D +D NVG+G+ GAP CGD+ ++Q+KVN E +IED +FK + Sbjct: 22 YSPLVEEHYNNPRNVGKLDKSDPNVGTGLRGAPECGDMTQMQVKVNPETMVIEDVKFKAF 81 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIA+SS ++ ++GK+L EA + N IA+EL LPPVK+HCS+LAE+ I+AA+ +Y Sbjct: 82 GCGSAIAASSYASQAIRGKTLAEALQLTNKRIAQELSLPPVKLHCSMLAEETIQAAVENY 141 Query: 122 KSKREA 127 SK + Sbjct: 142 LSKNPS 147 >UniRef50_C7PDA7 Nitrogen-fixing NifU domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDA7_CHIPD Length = 149 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 65/125 (52%), Positives = 96/125 (76%), Gaps = 1/125 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFK 59 MAY+E+V+D+Y NPRN G+ D + VG+G++ P +V+++QI+V+ + +I DARFK Sbjct: 3 MAYAERVLDYYNNPRNAGTLDKSSPQVGTGLIHVPEYIEVVRIQIEVSPKRHVIMDARFK 62 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 T+GCG+AIA++S+ TEW+KGK+++EA + + DI E L LPP KIH +IL EDA+KAAI Sbjct: 63 TFGCGAAIAATSITTEWLKGKTIEEAARLDHMDIVEALSLPPAKIHATILIEDAVKAAIN 122 Query: 120 DYKSK 124 DY+ K Sbjct: 123 DYRFK 127 >UniRef50_P05340 Nitrogen fixation protein nifU n=15 Tax=cellular organisms RepID=NIFU_AZOVI Length = 312 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 62/124 (50%), Positives = 91/124 (73%), Gaps = 5/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 YSEKV +H+ NP+N G+ + + G VG+ +CGD ++L +KV+ E +I DA F+T+ Sbjct: 4 YSEKVKEHFYNPKNAGAVEGAN---AIGDVGSLSCGDALRLTLKVDPETDVILDAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE VKG +LDEA I N DIA+ L+ LPP K+HCS++ +A++AA+A+ Sbjct: 61 GCGSAIASSSALTEMVKGLTLDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAN 120 Query: 121 YKSK 124 Y+ + Sbjct: 121 YRGE 124 >UniRef50_B1L5A7 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5A7_KORCO Length = 160 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 83/122 (68%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y+ +V++ + P+N+G D+ D G+PACGDV+ + +++ D G+IEDA+F++ Sbjct: 7 LPYTPRVLELFREPKNLGRIDDADAF---AQAGSPACGDVISIYLRIRD-GVIEDAKFES 62 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIA 119 YGC + IA++S++TE VKGK L+EA I IA+E LPPVK HCSILA A++ AI Sbjct: 63 YGCAANIAAASVLTEIVKGKRLEEAWNIDWQQIADELGGLPPVKKHCSILAVGALRRAIR 122 Query: 120 DY 121 Y Sbjct: 123 RY 124 >UniRef50_B8EJ14 Fe-S cluster assembly protein NifU n=6 Tax=Proteobacteria RepID=B8EJ14_METSB Length = 344 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 86/126 (68%), Gaps = 5/126 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFK 59 + YS+K+ DH+ NP+N G + + G GA +CGD +KL +KV+ +I DARF+ Sbjct: 11 LDYSDKIKDHFFNPKNAGPLADAN---AVGEAGALSCGDALKLMLKVDPLTEVILDARFQ 67 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAI 118 T+GCGSAIASSS +TE + GK++ +A + N IAE LPP K+HC++L DA++AAI Sbjct: 68 TFGCGSAIASSSALTELIIGKTIVQAAGLTNQQIAESLGGLPPEKMHCAVLGHDALQAAI 127 Query: 119 ADYKSK 124 A+++ + Sbjct: 128 ANFRGE 133 >UniRef50_C5BTF8 Fe-S cluster assembly protein NifU n=4 Tax=Proteobacteria RepID=C5BTF8_TERTT Length = 317 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 YSEKV +H+ +P+N G+ + + +G VG+ +CGD ++L +KV+ II+DA F+T+ Sbjct: 4 YSEKVKEHFFDPKNAGAVADAN---ATGDVGSLSCGDALRLTLKVDPATDIIQDAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE +KG +DEA I N DIA+ L+ LPP K+HCS++ +A++AA+AD Sbjct: 61 GCGSAIASSSALTEMIKGLHVDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAD 120 Query: 121 YKS 123 Y+ Sbjct: 121 YRG 123 >UniRef50_P05343 Nitrogen fixation protein nifU n=7 Tax=Bacteria RepID=NIFU_KLEPN Length = 274 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 60/124 (48%), Positives = 89/124 (71%), Gaps = 5/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 YSEKV DH+ NPRN DN + G VG+ +CGD ++L ++V+ + IIE+A F+T+ Sbjct: 4 YSEKVKDHFFNPRNARVVDNAN---AVGDVGSLSCGDALRLMLRVDPQSEIIEEAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE + G +L EA I N IA+ L+ LPP K+HCS++ ++A++AAIA+ Sbjct: 61 GCGSAIASSSALTELIIGHTLAEAGQITNQQIADYLDGLPPEKMHCSVMGQEALRAAIAN 120 Query: 121 YKSK 124 ++ + Sbjct: 121 FRGE 124 >UniRef50_B8I3D6 FeS cluster assembly scaffold protein NifU n=30 Tax=cellular organisms RepID=B8I3D6_CLOCE Length = 153 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 5/124 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEKV+DH+ NPRNVG ++ D G G VG CGD+MK+ +K+ D I+ DA+FKT+ Sbjct: 1 MYSEKVMDHFSNPRNVGEIEDAD---GVGQVGNSKCGDIMKMYLKIEDN-IVVDAKFKTF 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GCG+A+A+SS+ TE VKGK+++EA I N +AE L+ LPP K+HCS LAE+AI AA+ D Sbjct: 57 GCGAAVATSSMATELVKGKTVEEAMNITNKAVAEALDGLPPAKMHCSNLAEEAIAAALTD 116 Query: 121 YKSK 124 Y+ + Sbjct: 117 YRKR 120 >UniRef50_B5IVA4 NifU-like N terminal domain protein n=1 Tax=Thermococcus barophilus MP RepID=B5IVA4_9EURY Length = 216 Score = 141 bits (356), Expect = 6e-33, Method: Composition-based stats. Identities = 50/122 (40%), Positives = 86/122 (70%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + YS KV+ ++ +P+NVG +N + G+PACGD++KL +K+ ++ I+ DA+F++ Sbjct: 15 IGYSRKVLYYFLHPKNVGEIENPSV---TAKAGSPACGDMIKLYLKIENDKIV-DAKFRS 70 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIA 119 YGC + IA++S++TE + GK+++EA+ IK DI EE LP +K HC++LA + +K A+A Sbjct: 71 YGCAANIATASVLTEMIIGKTVEEAKKIKFKDIVEELGGLPQIKYHCAVLAAEGLKQALA 130 Query: 120 DY 121 + Sbjct: 131 KW 132 >UniRef50_A1AQD6 Nitrogen-fixing NifU domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQD6_PELPD Length = 133 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS KV DH+ PRN G ++ + G G +G P CGD +K+ +K+ D+ I++D +F+ G Sbjct: 6 YSPKVFDHFLTPRNNGVLEDAN---GIGEIGDPECGDHLKVYVKIEDD-IVKDIKFQIKG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 C +AIA +S +TE V GK + EA + + I E ++ LP K+HCS L + A+ DY Sbjct: 62 CPAAIACASAMTELVMGKPVGEAMLVSDDQIIEYIDGLPEFKVHCSALGASGFRVAVMDY 121 Query: 122 KSKRE 126 K + Sbjct: 122 SIKSK 126 >UniRef50_A4J289 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J289_DESRM Length = 163 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 58/123 (47%), Positives = 78/123 (63%), Gaps = 5/123 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 +AYSEK +DH+ NPRNVG +N + G G +G CGDV ++ I V +E I D +F+ Sbjct: 13 LAYSEKTLDHFRNPRNVGVVENYN---GRGKIGEADCGDVCEITILVEEEQ-INDIKFRV 68 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIA 119 YGC A+A+SS VTE KGK +EA + + D+ E L+ LP K HCS+L A+K AI Sbjct: 69 YGCVGAVATSSAVTELAKGKHCEEALKLTDDDVVEFLDGLPDQKKHCSLLGIRALKQAIY 128 Query: 120 DYK 122 DY Sbjct: 129 DYW 131 >UniRef50_P20628 Nitrogen fixation protein nifU n=46 Tax=Bacteria RepID=NIFU_ANASP Length = 300 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 87/126 (69%), Gaps = 5/126 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDE---NVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARF 58 Y++KV++ + +P+N G + N E V +G VG+ ACGD ++L IKV + I D+RF Sbjct: 4 YTDKVLELFYDPKNQGVIEENGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAA 117 +T+GC SAIASSS +TE +KG +LDEA + N DIA+ LP K+HCS++ ++A++AA Sbjct: 64 QTFGCTSAIASSSALTEMIKGLTLDEALKVSNKDIADYLGGLPEAKMHCSVMGQEALEAA 123 Query: 118 IADYKS 123 I +Y+ Sbjct: 124 IYNYRG 129 >UniRef50_Q74DA8 NifU-like domain protein n=1 Tax=Geobacter sulfurreducens RepID=Q74DA8_GEOSL Length = 131 Score = 138 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS KV DH NPRNVGS ++ + V G P CGD + +++ ++ I+ D +F G Sbjct: 5 YSAKVWDHVRNPRNVGSLEDANVVV---QAGDPTCGDAVLYFLRIEED-IVRDIKFLIKG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG+AIA+SS+ TE V GK LDE + + IA+ L+ LP K+HCS +A A+ AA+ Y Sbjct: 61 CGAAIATSSVATELVMGKGLDEVMGLSDQIIAQALDGLPEEKMHCSNMAASALHAAVEQY 120 Query: 122 KS 123 ++ Sbjct: 121 RA 122 >UniRef50_D1C3Z4 SUF system FeS assembly protein, NifU family n=2 Tax=cellular organisms RepID=D1C3Z4_SPHTD Length = 127 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DHY NPRN G+ +N D + P CGD +++ +++ D I+E +F G Sbjct: 5 YRENILDHYRNPRNYGTIENADISY---EDSNPLCGDRVRIDMRIEDGKIVE-IKFSGRG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAA 117 C + AS+S++TE V+G LDE + + DI +EL +P P ++ C++L +K+A Sbjct: 61 CAISQASASMLTEMVEGADLDEIRELSAQDILDELGVPISPARVKCALLGLKVLKSA 117 >UniRef50_C7I512 SUF system FeS assembly protein, NifU family n=1 Tax=Thiomonas intermedia K12 RepID=C7I512_THIIN Length = 165 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 22/135 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E + DHY PR+ G + P CGD ++L++ V+D G I+D F G Sbjct: 17 YQEVIFDHYRRPRHFGHLPQPNR---CAQGDNPLCGDRLELELFVDDAGCIQDVAFTGEG 73 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA-------------------IKNTDIAEELELPPVK 103 C + AS+SL+TE VKGK +DEA + + + P + Sbjct: 74 CAISTASASLLTEAVKGKRVDEALTLFVQMHGILVDGDTGAEAGLGKLAVLAGVRQFPAR 133 Query: 104 IHCSILAEDAIKAAI 118 + C++LA ++ A+ Sbjct: 134 VKCAMLAWHTLRNAL 148 >UniRef50_B4SCB5 Nitrogen-fixing NifU domain protein n=11 Tax=Bacteria RepID=B4SCB5_PELPB Length = 203 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 85/125 (68%), Gaps = 2/125 (1%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 AYS+K+ +H+ NP+N+ +N D+ G GM G CGD M + IKV+ E I D ++KT Sbjct: 8 AYSDKLKEHFMNPKNILQGENTDDFDGVGMEGNLQCGDQMMVVIKVDKEKETITDCQWKT 67 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 YGC SAIAS+S+++E VKG++LD A I ++A E LP KIHCS+L + A+++AI Sbjct: 68 YGCASAIASTSVLSEMVKGRTLDAAFHISPKEVALELGGLPDHKIHCSVLGDKALRSAIN 127 Query: 120 DYKSK 124 +Y ++ Sbjct: 128 NYYTR 132 >UniRef50_A5FQV7 Nitrogen-fixing NifU domain protein n=5 Tax=Dehalococcoides RepID=A5FQV7_DEHSB Length = 127 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 5/127 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y EKV++++ NP N G +N D G G G CG+V + I+V D ++E +FKTYG Sbjct: 4 YFEKVMEYFVNPLNSGEMENPD---GIGRAGNAVCGEVTEFYIRVKDNRLVE-VKFKTYG 59 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIADY 121 CG+A+A SSLV+ GK+++EA I N + AE LP + HCS + A+ +AIADY Sbjct: 60 CGAAVAISSLVSLMATGKTIEEAMKIDNKAVEAEIKGLPQNRNHCSQMGPQALHSAIADY 119 Query: 122 KSKREAK 128 K K +A+ Sbjct: 120 KIKVQAR 126 >UniRef50_Q39WZ1 Fe-S cluster assembly protein NifU n=33 Tax=cellular organisms RepID=Q39WZ1_GEOMG Length = 286 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 87/123 (70%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Y+EKV +H+ NPRNVG + D G VG+ ACGD +KL IK++D + I DA+F+T+ Sbjct: 4 YTEKVREHFLNPRNVGDIPDAD---AVGEVGSLACGDALKLYIKLDDAKERIVDAKFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 GC SAIASSS +TE +KGK+LDEA A N +IA+ LP K+HCS++ ++A++ AIA Sbjct: 61 GCASAIASSSALTEIIKGKTLDEALATTNQEIADFLGGLPEEKMHCSVMGQEALEVAIAK 120 Query: 121 YKS 123 Y+ Sbjct: 121 YRG 123 >UniRef50_A5UR74 SUF system FeS assembly protein, NifU family n=6 Tax=Chloroflexi (class) RepID=A5UR74_ROSS1 Length = 132 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 8/120 (6%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E +++HY++PR G D+ D S P CGD +++ +++ + GII DARF G Sbjct: 5 YRELILEHYKHPRRRGRIDHPDV---SAEEHNPLCGDRVRIDLRI-ENGIITDARFDGRG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP----PVKIHCSILAEDAIKAAI 118 C + AS+S++TE + G +++A+ + + +P PV+I C++L +K + Sbjct: 61 CAISQASASMLTEEIVGMPVEQAKQFSKDQMLALIGIPLNHNPVRIKCALLPLKTLKVGL 120 >UniRef50_Q4UGE0 RNaseP-like protein with Nifu domain, putative n=1 Tax=Theileria annulata RepID=Q4UGE0_THEAN Length = 261 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 63/91 (69%), Positives = 75/91 (82%), Gaps = 1/91 (1%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS +V DH+ NPRNVGSFD +D +VG+ +VG ACGDV+KLQ+K+ DE +IEDA FKT+G Sbjct: 154 YSPEVNDHFNNPRNVGSFDKDDPSVGTAIVGKAACGDVIKLQVKIKDE-VIEDACFKTFG 212 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI 93 CGSAIASSS VTE VKGK+ EA AIKNTDI Sbjct: 213 CGSAIASSSYVTEMVKGKTCKEALAIKNTDI 243 >UniRef50_B3E6H1 Nitrogen-fixing NifU domain protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E6H1_GEOLS Length = 153 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 5/121 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+ V+DH NPRNVG D+ + V VG P CGD + L ++++D G + F Sbjct: 7 QYTGTVLDHARNPRNVGGMDDANVVV---QVGDPECGDTLLLFMRIDD-GCVAKVSFLIK 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIAD 120 GCG+AIA++S+ TE VKGKSL+EA + + + A LP K HCS L A+ AAIA Sbjct: 63 GCGAAIATASMGTELVKGKSLNEALLVTDATVTAALGGLPEDKEHCSNLIASAVHAAIAQ 122 Query: 121 Y 121 Y Sbjct: 123 Y 123 >UniRef50_B6IR40 SUF system FeS assembly protein, NifU family n=2 Tax=Proteobacteria RepID=B6IR40_RHOCS Length = 160 Score = 129 bits (325), Expect = 2e-29, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 29/143 (20%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH +PRN G + P CGD + + + V+D+G+I DA F G Sbjct: 9 YQEVILDHGRHPRNFGR---PATFNRTARGDNPMCGDKITIYLTVSDDGVITDAGFDGRG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEA--------------------------QAIKNTDIAEE 96 C + AS+SL+TE +KG+ + EA +A+ + Sbjct: 66 CAISQASASLMTEILKGRPVAEAEALFGRFHDMCTKDEDQWGTHGPVDEEALDKLQVLSG 125 Query: 97 LELPPVKIHCSILAEDAIKAAIA 119 + P+++ C+ LA + AA+ Sbjct: 126 VREFPMRVKCATLAWHTMHAALQ 148 >UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=MNMA_RUBXD Length = 488 Score = 129 bits (325), Expect = 2e-29, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +VI+H NPRN G G G G ACGD ++ ++V + +++ R++ YG Sbjct: 5 YGPRVIEHLVNPRNAGEVGGPS---GVGEAGNAACGDQVRFTLRVGGDLRLQEVRYRAYG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE--LPPVKIHCSILAEDAIKAAIAD 120 C + IA+ S + E +G+S+ A I DI E L LPP K H + LA DA+ A D Sbjct: 62 CAACIAAGSALAELAEGRSITGAAQISRGDIQEALGGPLPPGKEHGATLALDALHRAFED 121 Query: 121 YKSKR 125 Y S++ Sbjct: 122 YWSRQ 126 >UniRef50_D1JBD9 Putative NifU-like protein n=2 Tax=uncultured archaeon RepID=D1JBD9_9ARCH Length = 141 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 6/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE+ ++ NP+NVG ++ D G G + P CGD M++ +K+ D I+ D +F + G Sbjct: 24 YSERTLEEAYNPKNVGVLEDPD---GCGRITGP-CGDTMQIHLKIADAKIV-DCKFISDG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 CG + AS S VTE KGK++++A I I L+ LP IHC +LA + ++AAI DY Sbjct: 79 CGPSTASGSAVTEMAKGKTIEDALMIDANAILAVLDGLPEESIHCPVLAVNTLRAAIEDY 138 Query: 122 KSK 124 K+K Sbjct: 139 KNK 141 >UniRef50_B8HK33 SUF system FeS assembly protein, NifU family n=2 Tax=Chroococcales RepID=B8HK33_CYAP4 Length = 165 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 21/136 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++HY+ PR+ G + P+CGD ++L +++++ G I D +F+ G Sbjct: 10 YQQVILEHYKKPRHRG---KTNPVHRHQRGHNPSCGDTIELTVQLDETGRIADIKFEGEG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTD------------------IAEELELPPVKI 104 C A++S+ L+ + +GK++ EA A+ + + + PV+I Sbjct: 67 CAIALSSADLMADAARGKTIPEALAMVQQFQTMMKGEGEFPKDLRKLNVMQGVAQFPVRI 126 Query: 105 HCSILAEDAIKAAIAD 120 C+ L ++AA+ D Sbjct: 127 KCATLTWHTLRAALED 142 >UniRef50_B6QUS0 Iron-sulfur cofactor synthesis protein (Isu1), putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QUS0_PENMQ Length = 189 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 8/131 (6%) Query: 1 MAYSEKVIDHYENPRN---VGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDA 56 M ++ + H N N VGS D +VGSG+VGAPA ++L I+V+++ G I + Sbjct: 43 MPTTKALFIHRHNHANLKLVGSLDRKSNDVGSGLVGAPA----IRLDIQVDEKTGKIVKS 98 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKA 116 FKT+GCGSAIASSS +T + GK+L+EA I+NT IA EL LPPVK+HCS+LAEDAIKA Sbjct: 99 AFKTFGCGSAIASSSYLTTLLAGKTLEEAGKIQNTQIANELCLPPVKLHCSLLAEDAIKA 158 Query: 117 AIADYKSKREA 127 AI +Y+SKR A Sbjct: 159 AIKNYQSKRPA 169 >UniRef50_A1SV02 SUF system FeS assembly protein, NifU family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SV02_PSYIN Length = 153 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E +IDH PRN ++ + P CGD + L ++++D II DA F+ G Sbjct: 9 YQEVIIDHGRRPRNSKKLEHPSC---TQEGYNPLCGDRLTLYLRIDDNRII-DASFEGEG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELP-------------------P 101 C ++A+SSL+TE +K ++ EA+ + ++ + E P P Sbjct: 65 CAISMAASSLMTERIKNMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGVRDFP 124 Query: 102 VKIHCSILAEDAIKAAIADYKSKR 125 V+I C+ L A+ A + + +K+ Sbjct: 125 VRIKCATLPWHALNACLNNINTKQ 148 >UniRef50_B6BSS9 SUF system FeS assembly protein, NifU family n=3 Tax=Candidatus Pelagibacter RepID=B6BSS9_9RICK Length = 154 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 27/144 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E +++H +NPRN+G D+ +++ P CGD + + +K+N + I+ED F+ G Sbjct: 7 YQEIILEHGKNPRNLGKTDDFNKD---AKGHNPLCGDNVHVYLKLNGQKIVEDISFEGSG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP---------------------- 100 C ++AS+S++T+ +KGK+ EA+ I + E P Sbjct: 64 CAISMASASIMTDLIKGKNEHEAKEIVEDFLGMIKENPELKSENLAEDEKTKLMCLSGVK 123 Query: 101 --PVKIHCSILAEDAIKAAIADYK 122 P+++ C+ L+ + +A + K Sbjct: 124 QYPMRVKCATLSWHTLVSAFENKK 147 >UniRef50_C1XI12 SUF system FeS assembly protein, NifU family n=2 Tax=Meiothermus RepID=C1XI12_MEIRU Length = 147 Score = 126 bits (318), Expect = 1e-28, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 22/143 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++ HY++P N GS ++ + V + P+CGD ++L ++ + E I D RF+ G Sbjct: 8 YKEIILRHYKSPHNYGSLESANVRV---VGDNPSCGDQIELLVETDGEQ-IADVRFRGQG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTD---IAEELELPP---------------VKI 104 C + AS+SL+T+ VKGK+ EA ++ I + P ++ Sbjct: 64 CAISQASASLMTDLVKGKTWAEALELERKFKSMILDGTPPSPELGDLAALSGVHKLAARV 123 Query: 105 HCSILAEDAIKAAIADYKSKREA 127 C+ LA +A++ A + ++K + Sbjct: 124 KCATLAWNALEQAAQEARTKAQG 146 >UniRef50_B3T2T4 Putative NifU-like N terminal domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93H17 RepID=B3T2T4_9ARCH Length = 149 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 10/125 (8%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +I++ NP N G +N + P CGD + L + V+ I + +F G Sbjct: 7 YTEMIIEYSRNPSNFGKIENPHIHRHDS---NPLCGDSIDLYVNVDGNK-ITEVKFDGKG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELEL------PPVKIHCSILAEDAIKA 116 C +A +S++TE +KGK+L+E + K D+ EL L PV+I C++L+ A+K Sbjct: 63 CAICMACTSVLTEMIKGKNLEEVKNFKKDDLLSELGLGHLIKTSPVRIKCALLSLKALKY 122 Query: 117 AIADY 121 I Y Sbjct: 123 GIYSY 127 >UniRef50_B0R7Y3 Iron-sulfur cluster assembly protein n=5 Tax=Halobacteriaceae RepID=B0R7Y3_HALS3 Length = 142 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 Y ++++DHY NPRN G + P+CGD ++ + ++D+G I F+ Sbjct: 7 MYRQQILDHYRNPRNQGELPEPSF---THEGYNPSCGDELEFDVALDDDGETIAHVAFRG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE--LELPPVKIHCSILAEDAIKAAI 118 GC + AS+S+++E + G +L E A+ DI + +E+ P++I C++L+E ++ Sbjct: 64 DGCAISQASASMLSEELPGMTLAEVDALDRDDILDMLGVEVTPMRIKCAVLSEKVVQDGA 123 Query: 119 ADY 121 Y Sbjct: 124 EIY 126 >UniRef50_B2GCP7 Nitrogen fixation protein n=69 Tax=Bacilli RepID=B2GCP7_LACF3 Length = 156 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH ++P N G+ + + + P CGD + LQ+KV +G+I++ + +G Sbjct: 10 YREVILDHADHPHNKGALKDATNAI---TLNNPTCGDEIDLQVKVGSDGLIDEIGYTGHG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ---------------------AIKNTDIAEELELPP 101 C + AS+S++TE VKGK DEA A+ + + + P Sbjct: 67 CTISQASASMMTEAVKGKRPDEALAMAKIFSDMAIGKDHDQADLQALGDAQVLTSIMEFP 126 Query: 102 VKIHCSILAEDAIKAAI 118 +I C+ LA A++ A+ Sbjct: 127 ARIKCATLAWWALQRAL 143 >UniRef50_O32163 NifU-like protein n=159 Tax=Bacillales RepID=NIFU_BACSU Length = 147 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 75/137 (54%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DHY+NPRN G +++ + P CGD ++L +K++ + I+EDA+F+ G Sbjct: 11 YRQVIMDHYKNPRNKGVLNDS----IVVDMNNPTCGDRIRLTMKLDGD-IVEDAKFEGEG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELEL-----------------PPVK 103 C ++AS+S++T+ +KGK ++ A ++ +D+ + E P + Sbjct: 66 CSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPAR 125 Query: 104 IHCSILAEDAIKAAIAD 120 I C+ L+ A++ +A Sbjct: 126 IKCATLSWKALEKGVAK 142 >UniRef50_A7NG60 SUF system FeS assembly protein, NifU family n=2 Tax=Roseiflexus RepID=A7NG60_ROSCS Length = 134 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 +++DHYE+PRN GS + D G+ P CGDV+ + +K++ + F+ GC Sbjct: 9 RLLDHYEHPRNRGSLPDADVTQTGGI---PDCGDVVTVYLKIDPPDRVVAISFEGQGCTI 65 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAIADYKS 123 + A++S+++E V G + E +AI ++ + L E + C+ LA +KAAIA Y+ Sbjct: 66 SQAAASILSERVIGSTFAEIEAITLDEMIDFLGREAVQTRPRCATLALRTLKAAIAAYRR 125 >UniRef50_A5EYF1 SUF system FeS assembly protein, NifU family n=2 Tax=Bacteria RepID=A5EYF1_DICNV Length = 146 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 22/134 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH +NPRN + S P CGD +K+ +++N EG+I D F G Sbjct: 8 YQELILDHSKNPRNFHAL---TPCTHSATGHNPLCGDNLKVFVRLN-EGVIADLSFVGDG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI---------KNTDIAEE---------LELPPVKI 104 C + AS+S++TE GK+L+E Q + I +E + P ++ Sbjct: 64 CAISKASASMMTELAMGKTLEEFQKLYDLFHYIATTQNPIPQEVGKLQALAGVRQYPARV 123 Query: 105 HCSILAEDAIKAAI 118 C+ LA + AA+ Sbjct: 124 KCATLAWHTLDAAL 137 >UniRef50_O09257 NifU n=13 Tax=Bacteria RepID=O09257_CYAP8 Length = 294 Score = 125 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 88/125 (70%), Gaps = 4/125 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDE--NVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFK 59 Y++KV++ + NPRN G+ E + +G VG+ ACGD K+ +K+++ II DARF+ Sbjct: 4 YTDKVMEFFYNPRNQGTITEKQEGQAITTGEVGSIACGDSPKIHLKIDEATQIILDARFQ 63 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAI 118 T+GC SAIASSS +TE + GK+LDEA ++ N +IAE LP K+HCS++ ++A++AAI Sbjct: 64 TFGCASAIASSSALTELLVGKTLDEALSLTNREIAEFLGGLPEEKMHCSVMGQEALEAAI 123 Query: 119 ADYKS 123 +Y+ Sbjct: 124 FNYRG 128 >UniRef50_C9A1I3 SUF system FeS assembly protein n=2 Tax=Firmicutes RepID=C9A1I3_ENTGA Length = 162 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 23/137 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH +P + G+ ++ V + P CGDV+ L++ V E I+D F G Sbjct: 10 YRQVILDHSSHPHHRGTLGDSTYKV---ELNNPTCGDVIHLELAVEGE-TIKDVAFTGEG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIK-------------------NTDIAEELELPPVK 103 C + AS+S++ + V GK+L EA + + + + P + Sbjct: 66 CSISTASASMMGDAVIGKTLTEAGELSGLFSELVQGHTVSDSDRLGDASMLGGVAKFPAR 125 Query: 104 IHCSILAEDAIKAAIAD 120 I C+ LA A++ AIAD Sbjct: 126 IKCATLAWKALEKAIAD 142 >UniRef50_C7NMT9 SUF system FeS assembly protein, NifU family n=7 Tax=Halobacteriaceae RepID=C7NMT9_HALUD Length = 163 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 72/123 (58%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 Y ++++DHY+NPRN G + + + P CGD +++ + ++D+ IE F+ Sbjct: 25 MYRQQILDHYKNPRNYGEIEGATF---THVGENPMCGDTIEMDVVLDDDEETIEAVAFQG 81 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE--LELPPVKIHCSILAEDAIKAAI 118 GC + AS+S+++E ++G +++E +A+ D+ + +++ P+++ C++LAE + Sbjct: 82 DGCAISQASASMLSERLEGMTIEELEALDRDDVIDMLGVDISPMRVKCAVLAEKVAQDGA 141 Query: 119 ADY 121 Y Sbjct: 142 EIY 144 >UniRef50_Q0F1C8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1C8_9PROT Length = 151 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 24/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH ++PRN G + + P CGD + + + V+D+GIIED F+ G Sbjct: 8 YQQVIVDHNKSPRNFGKLASFN---HEADGYNPLCGDKLHIYLNVSDDGIIEDVSFEGEG 64 Query: 63 CGSAIASSSLVTEWVKGKSL-------DEAQAIKNTDIAEELEL--------------PP 101 C ++AS+SL+T+ +KG L + Q + DI EE + P Sbjct: 65 CAISVASASLMTDALKGTELAAFQQRFEGFQHMVTADIDEEPDTDVLGKLAVLSGVREFP 124 Query: 102 VKIHCSILAEDAIKAAIAD 120 +I C+ L +KAAI D Sbjct: 125 SRIKCASLCWHTMKAAIED 143 >UniRef50_B3DY81 NifU-like protein involved in Fe-S cluster formation n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY81_METI4 Length = 164 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTY 61 Y E ++DH +PRN G + P+CGD +++ +K+ +IED F Sbjct: 31 YQEIILDHSRHPRNFGKPEG---EFREAEGSNPSCGDSVRVFVKIGFPHQLIEDVHFLGR 87 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI-------------KNTDIAEE------LELPPV 102 GC +AS+SL+TE V+ K ++E + + +N +I EE + P Sbjct: 88 GCAICMASASLMTEVVRQKKVEEIKTLIENFQAFLTGKEKRNAEIPEELFPLKGVRQFPA 147 Query: 103 KIHCSILAEDAIKAAI 118 ++ C++L A++ I Sbjct: 148 RVKCALLPWHALEKII 163 >UniRef50_C7DI52 SUF system FeS assembly protein, NifU family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI52_9EURY Length = 124 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E++I +YE+P N G DN D + P CGD + + IKV+D +++ +F+ G Sbjct: 6 YAEELISNYEHPHNKGKIDNPDAEMHE---YNPVCGDDITIYIKVSDNK-VKEVKFEGQG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAIAD 120 C ++ ++S++TE +KGKSL E A+ DI E + + P ++ C+ ++ A++ A+ Sbjct: 62 CAISMGTASMLTESIKGKSLSEISAMGFKDIVELIGVDPGPARLKCATISLKALQKAVQK 121 Query: 121 YK 122 K Sbjct: 122 IK 123 >UniRef50_B9XEV1 Nitrogen-fixing NifU domain protein n=2 Tax=Verrucomicrobia RepID=B9XEV1_9BACT Length = 167 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 77/119 (64%), Gaps = 7/119 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE---GIIEDARFKTY 61 +++ + NP+N+G N D G VG CG++++L +K D+ +I+ A F+++ Sbjct: 7 KRIREAMLNPQNMGELANADS---VGTVGNSDCGEMLRLWVKFKDDNGRKVIDKATFQSF 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 GC +AIA +SL TE ++GK+ +EA A+K D+A E LPP+KIHC+ L E A+++A+ Sbjct: 64 GCETAIAVASLATELIRGKTAEEALALKTEDLAGELGPLPPMKIHCAQLVEGALRSALE 122 >UniRef50_B4D357 SUF system FeS assembly protein, NifU family n=4 Tax=Bacteria RepID=B4D357_9BACT Length = 154 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 22/136 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH PRNVG + +V P+CGD + L +K +G IED +F G Sbjct: 9 YQQVILDHSRRPRNVGEIADGAVHVHG---DNPSCGDEIHLHVKFGADGGIEDLKFTGQG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEA-------------------QAIKNTDIAEELELPPVK 103 C + AS+SL+T VKGKS +A +++ + + + + P + Sbjct: 66 CAISQASASLMTLKVKGKSRADAGAMLSAFHDLVTTEVSDPPKSLGDLRLLQGVRKFPQR 125 Query: 104 IHCSILAEDAIKAAIA 119 + C++LA A++ A+ Sbjct: 126 VKCAMLAWRALEQAME 141 >UniRef50_B9L9A8 NifU family protein n=6 Tax=Epsilonproteobacteria RepID=B9L9A8_NAUPA Length = 321 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 13/136 (9%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDEN-----VGSGMVGAPACGDVMKLQIKVNDE-GIIED 55 YS KVID NP+ +G F D + G+ ACGD ++L V+ + I D Sbjct: 14 QYSNKVIDRMNNPKYLGEFTEEDAKKRGLKLVVADFGSEACGDAVRLYWLVDPKTDKIVD 73 Query: 56 ARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-------LPPVKIHCSI 108 ARFK++GCG+AIASS ++TE GK++DEA I N D+ + L PP K+HCS+ Sbjct: 74 ARFKSFGCGTAIASSDMMTELTIGKTVDEAMKITNLDVEKALRDDPNTPAFPPQKMHCSV 133 Query: 109 LAEDAIKAAIADYKSK 124 +A D I A A YK K Sbjct: 134 MAYDVIIEAAAKYKGK 149 >UniRef50_Q2JCF1 SUF system FeS assembly protein n=86 Tax=Actinobacteria (class) RepID=Q2JCF1_FRASC Length = 172 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 25/140 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DHY NP + G D D V P CGD + L++KV+D G++ED +++ Sbjct: 6 MYQEIILDHYRNPLHRGLRDPFDAEVHHV---NPTCGDEVTLRVKVSD-GVVEDVSYESE 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELEL---------------------P 100 GC + AS+S++++ V GKS+D A ++ +A Sbjct: 62 GCSISQASASVMSDLVIGKSVDAALKLEREFLALMQSRGTIEGDEDVLEDAVAFAGVSKY 121 Query: 101 PVKIHCSILAEDAIKAAIAD 120 P ++ C++L+ A K A A Sbjct: 122 PARVKCALLSWMAWKDATAK 141 >UniRef50_A6LUJ3 SUF system FeS assembly protein, NifU family n=5 Tax=Bacteria RepID=A6LUJ3_CLOB8 Length = 141 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +++H + N + DN D P+CGD + L++K+N G+IED F G Sbjct: 7 YTELIMEHSTSKHNKRNLDNPDIK---EKGHNPSCGDEITLELKLN-NGVIEDLAFTGQG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+S++ + +KGK+++EA + T I + + P Sbjct: 63 CAISQASTSIMIDLIKGKNIEEALKLTETFIGMIKREIKDDEELYALEDAMAFKNISNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA +K A+ Sbjct: 123 ARVKCAVLAWHTLKEALEK 141 >UniRef50_A0RRI4 Nitrogen fixation protein NifU n=55 Tax=cellular organisms RepID=A0RRI4_CAMFF Length = 333 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 13/134 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVG-----SGMVGAPACGDVMKLQIKVN-DEGIIEDA 56 YS+KV D +P+N+G N GA +CGD ++L V + II+DA Sbjct: 15 YSQKVQDAMNHPKNMGEITEEQANAMGCELIIADHGAESCGDAVRLYWAVEKNTDIIKDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-------LPPVKIHCSIL 109 +FK++GCG+AIASS + E KGK++DEA I N D+ + + +PP K+HCS++ Sbjct: 75 KFKSFGCGTAIASSDYMAELCKGKTVDEAVKITNIDVEKAMRDDPEIPAVPPQKMHCSVM 134 Query: 110 AEDAIKAAIADYKS 123 A D IKAA A YK Sbjct: 135 AYDVIKAAAASYKG 148 >UniRef50_Q1AZN5 SUF system FeS assembly protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZN5_RUBXD Length = 140 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 21/135 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DHY PRN G ++ D + + P CGD + + + + + +A F G Sbjct: 6 YGQVIMDHYRRPRNRGELEDADL---TRHLLNPLCGDEVTVYARFEGDR-VAEASFTGRG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA---------IKNTDIAEELEL--------PPVKIH 105 C + AS+S++TE ++GKS +EA+A + E +L P +I Sbjct: 62 CSISQASASMMTERLRGKSREEAEAEISRFKRMMTGEEEFPEGDDLAALKGVIQYPSRIR 121 Query: 106 CSILAEDAIKAAIAD 120 C+ LA +A + + + Sbjct: 122 CATLAWEAFQQGLEE 136 >UniRef50_A1AQB7 Nitrogen-fixing NifU domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQB7_PELPD Length = 156 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 5/125 (4%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E +DH NPRNVG ++ + + G P C D + +++ ++ ++ + +F GC Sbjct: 4 ETFLDHARNPRNVGLLEDANVVI---QAGDPECSDKLIFFVRIEED-LVRNIKFLIEGCE 59 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADYKS 123 + +A+SS +T V G+SLD A+ DIA L+ LP K+HC +A A+ AA+ Y++ Sbjct: 60 TTVATSSALTGLVMGQSLDVVLALDTEDIAAVLDGLPVEKMHCPTMAISALHAAVRLYRA 119 Query: 124 KREAK 128 + Sbjct: 120 TPRGE 124 >UniRef50_UPI0001746083 putative FeS assembly protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746083 Length = 166 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 7/119 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKV---NDEGIIEDARFKTY 61 E + D NP+NVG + D G VG+P CGD++++ IK + + +I+ A F+++ Sbjct: 4 EVLQDALANPQNVGEIPDAD---AVGTVGSPDCGDMVRMWIKYKEQDGKKVIDKATFQSF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIA 119 GC +AIA +SL T+ +KGK+ +EA + ++++ LPP+KIHC + E A+KAA+ Sbjct: 61 GCQTAIAVASLATQLIKGKTREEALDLSAEELSKPLGPLPPMKIHCGQMVEGALKAALE 119 >UniRef50_Q2JUE7 SUF system FeS assembly protein, NifU family n=6 Tax=Cyanobacteria RepID=Q2JUE7_SYNJA Length = 162 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 22/136 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Y + +++ Y PRN G D P+CGD + L ++++ + I D +F+ Sbjct: 10 YQQVILERYRKPRNFGRVDPVHRRQ---RGHNPSCGDTIDLTLQLDPGQERIADIKFEGE 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTD------------------IAEELELPPVK 103 GC A+AS+ L+ + V+G+++ EA + + + PV+ Sbjct: 67 GCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGVAQFPVR 126 Query: 104 IHCSILAEDAIKAAIA 119 I C+ LA A+K A+ Sbjct: 127 IKCANLAWHALKHALE 142 >UniRef50_Q04QC7 NifU related protein associated with Fe-S cluster formation n=4 Tax=Leptospira RepID=Q04QC7_LEPBJ Length = 144 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 24/141 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DHY+NPR G + D + P CGD ++L I + + I D R G Sbjct: 8 YKEVILDHYQNPRFRGKLEPADLSEHGI---NPLCGDELELTINLEGDK-IADVRVTGKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI--------------------KNTDIAEELELPPV 102 C + AS S++ E ++GK++ EA+ I ++ + E ++ P Sbjct: 64 CSISQASGSMMAESIRGKTVLEAEHILSRFKSMFLENRDPQFEKELEDLESMESVKKIPA 123 Query: 103 KIHCSILAEDAIKAAIADYKS 123 +I C++L + ++ A++ + Sbjct: 124 RIKCAVLPWNTLERALSRIEK 144 >UniRef50_C1I2Y9 SUF system FeS assembly protein n=2 Tax=Clostridiales RepID=C1I2Y9_9CLOT Length = 143 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +++H + N DN D S P+CGD + L++K+N + IIED F G Sbjct: 7 YTELIMEHSTSRHNRRKLDNPDL---SEKGHNPSCGDEITLELKMNGD-IIEDLAFTGQG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+S++ + +KGK +EA + T I + + P Sbjct: 63 CAISQASTSMMIDLIKGKDKEEALKLVETFIGMIKREINDEDELEDLEDAIVLKNISNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA +K A + Sbjct: 123 ARVKCAVLAWHTLKEAFGE 141 >UniRef50_D1JAT5 NifU-like protein n=2 Tax=uncultured archaeon RepID=D1JAT5_9ARCH Length = 129 Score = 118 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEK I++Y N NVG + + + CGD M++ + V D G I++A+F+ Sbjct: 12 GYSEKAIEYYLNKVNVGELSDANSQA----IYTGPCGDTMEIFLNVED-GEIKEAKFQAI 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 GC A +S S +TE + GK+L+EA+ I TDI +P K+HC+ L + ++ AI Sbjct: 67 GCAGAFSSGSALTEMIIGKTLEEAEKIDETDIMAYLGGIPAQKLHCACLCKRTLRKAIDA 126 Query: 121 YKS 123 YK Sbjct: 127 YKK 129 >UniRef50_B6J805 IscU n=24 Tax=Bacteria RepID=B6J805_COXB1 Length = 158 Score = 117 bits (294), Expect = 9e-26, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 22/134 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +IDH NPR+ G + + P CGD + + + G+I DARF+ G Sbjct: 18 YHQLIIDHGRNPRHFGRLEMP---THTHEGYNPLCGDRLTVFFQ-EKNGVITDARFEGSG 73 Query: 63 CGSAIASSSLVTEWVKGKSLD------------------EAQAIKNTDIAEELELPPVKI 104 C ++AS+SL+ E +KGKS+ EA + + + P ++ Sbjct: 74 CAISMASASLMMEALKGKSIQAAEILFSQFHDLVTGTKREAAQLGKLAVLAGVAEYPARV 133 Query: 105 HCSILAEDAIKAAI 118 C+ L AA+ Sbjct: 134 KCATLCWHTALAAL 147 >UniRef50_A8YU52 NifU-like protein n=4 Tax=Lactobacillus RepID=A8YU52_LACH4 Length = 153 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++++ NP+N GS + D V +CGD + L + +ND+ I +F G Sbjct: 10 YREVILENANNPQNHGSLADADYQT---TVYNSSCGDKLNLFLNLNDQNEISAIKFNGEG 66 Query: 63 CGSAIASSSLVTEWVKGK---------------------SLDEAQAIKNTDIAEELELPP 101 C + AS+SL+T+ VKGK S DE + + I + + P Sbjct: 67 CTISQASASLMTQVVKGKNKGEAIEIAKIFSKMAMGKDCSKDEIAKLGDAQIMTNIMMFP 126 Query: 102 VKIHCSILAEDAIKAAI 118 +I C+ LA A++ + Sbjct: 127 ARIKCATLAWWALERIL 143 >UniRef50_Q1JIL3 IscU protein n=65 Tax=Bacilli RepID=Q1JIL3_STRPD Length = 159 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 24/136 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y V DH + P + G D V + + P CGDV+ L +K +++ IED F G Sbjct: 10 YMAVVADHSKRPHHHGQLDG----VEAVQLNNPTCGDVISLTVKFDEDK-IEDIAFAGNG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELP-----------------PVK 103 C + ASSS++T+ V GKS +EA A+ + +++ + E P P + Sbjct: 65 CTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQR 124 Query: 104 IHCSILAEDAIKAAIA 119 I CS LA +A+K AI Sbjct: 125 IKCSTLAWNALKEAIK 140 >UniRef50_D1CFT0 Nitrogen-fixing NifU domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFT0_THET1 Length = 134 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 6/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTY 61 Y++ IDHY +PRNVG + G+G G G + +QI + +IED RF+ + Sbjct: 11 YTDITIDHYLHPRNVGIIPDA---TGAGTAGDQEKG-QIMIQITLRCSNRVIEDIRFRAF 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 GC + IAS+S+VTE KGK+L+EA+AI + + E LP K++C+ A +A+ AI D Sbjct: 67 GCSATIASASMVTELAKGKTLEEAEAITSHVLLEALGGLPQDKLYCADYATEALHIAIKD 126 Query: 121 YKSK 124 S+ Sbjct: 127 AISR 130 >UniRef50_C5CEE1 SUF system FeS assembly protein, NifU family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEE1_KOSOT Length = 146 Score = 116 bits (292), Expect = 1e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 22/144 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE ++ HY+N G ++ + +CGD + + +K ND IE F +G Sbjct: 7 YSEFILYHYKNSPYKGVLEDATND---EEGKNLSCGDQIHVYVKFNDNK-IETISFDGHG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEELELPPVKI 104 C ++AS+S++ E + GKS++EA+ I + I + ++ P+++ Sbjct: 63 CAISMASASIMAETLSGKSVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPMRV 122 Query: 105 HCSILAEDAIKAAIADYKSKREAK 128 C+ LA ++ I + + K+ + Sbjct: 123 KCASLAWRTLERIIDEREQKKAGE 146 >UniRef50_C7M3C8 SUF system FeS assembly protein, NifU family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M3C8_ACIFD Length = 153 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 27/146 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DHY++PRN G D+ D G P CGD +KL I V + + D R +G Sbjct: 8 YREIILDHYKHPRNQGVLDDPDAIREEGF--NPLCGDEIKLSILVKGDRL-ADIRVDGHG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT------------------------DIAEELE 98 C + +S+SL++E VKGK L E I + + Sbjct: 65 CSISRSSASLMSEAVKGKDLAEVDRIIERFKAMVVGGEGAAEGLDSLRTLGELAALQGVV 124 Query: 99 LPPVKIHCSILAEDAIKAAIADYKSK 124 PV++ C+ L ++++ A+A +++ Sbjct: 125 KFPVRVKCATLPWNSLQNALATARAR 150 >UniRef50_Q3A8K8 NifU-like protein n=3 Tax=Desulfuromonadales RepID=Q3A8K8_PELCD Length = 143 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 5/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS++V++H+ PRNVG DN + G P CGD + + + + ++ +I D ++K Sbjct: 1 MYSKQVMEHFTRPRNVGYIDNPSVAI---QYGDPTCGDCLLVFLLIEED-VIRDMKYKVL 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIAD 120 GC +AIA++S+ +E G++L++A + ++A LPP K+HCS LA A+KAA+ Sbjct: 57 GCAAAIATASITSEMAIGRTLEQAMELTEKEVAVALGGLPPQKMHCSNLAVGALKAALRV 116 Query: 121 YKS 123 Y + Sbjct: 117 YLA 119 >UniRef50_B0K2I6 SUF system FeS assembly protein, NifU family n=10 Tax=Thermoanaerobacter RepID=B0K2I6_THEPX Length = 137 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 22/134 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE +++HYEN + + P CGD + L +K+N + IIEDA F +G Sbjct: 8 YSEVIMEHYENSPHEKELKDA---THKERGYNPLCGDNITLYLKMNGD-IIEDASFTGHG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ------------------AIKNTDIAEELELPPVKI 104 C + AS+S++ + +KGK EA + + + + + P ++ Sbjct: 64 CAISQASTSMMIDLIKGKDKKEALRLVQQFIDMMHKKDVNLDELGDAQVLQGVSDFPARV 123 Query: 105 HCSILAEDAIKAAI 118 C++LA ++ + Sbjct: 124 KCALLAWKTLQEIL 137 >UniRef50_D2QWB8 SUF system FeS assembly protein, NifU family n=2 Tax=Planctomycetaceae RepID=D2QWB8_9PLAN Length = 129 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 5/118 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+DHYE+P + G + + P CGDV+ +++K+++ +++A F G Sbjct: 10 YQDHVMDHYEDPYHHG---HCIDATHMHEDDNPLCGDVIHVELKIDENQKVKEAWFSGDG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAI 118 C + AS+S++ E ++G S+DE +A+ + E L P + C +L+ ++ A+ Sbjct: 67 CCISQASASMLMEKIEGLSVDEVKAMSANQMLELFGARLTPNRQKCCLLSWRVVQQAV 124 >UniRef50_Q02X70 NifU-like protein for Fe-S cluster formation n=29 Tax=Bacilli RepID=Q02X70_LACLS Length = 152 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++DH NPR+ G + P CGDV++L ++ + +I + F +G Sbjct: 10 YRAVILDHSSNPRHAGEL----HTGCMIDLNNPTCGDVIRLTVEFEGD-VISNIAFSGHG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ-------------------AIKNTDIAEELELPPVK 103 C + AS+S++T V GK+ +EA+ A+ + + P + Sbjct: 65 CTISTASASMMTVAVLGKTKEEAKELATIFSAMVTGETDERQEALGDAQFLAGVSKFPAR 124 Query: 104 IHCSILAEDAIKAAIAD 120 + CS LA +A+K AI Sbjct: 125 VKCSTLAWNALKKAIDF 141 >UniRef50_A9W9Z0 Nitrogen-fixing NifU domain protein n=3 Tax=Chloroflexus RepID=A9W9Z0_CHLAA Length = 130 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 6/115 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E+++DHY PR+ G + G G P CGD + + ++V G + D +F GC Sbjct: 12 ERLLDHYRQPRHYGELPDAITYSG----GVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCS 67 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAA 117 ++ ++S++ E ++G ++ + A+ T + + E+ + HC+ L +KAA Sbjct: 68 VSVGTASILIEQLQGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAA 122 >UniRef50_A7H8S0 SUF system FeS assembly protein, NifU family n=3 Tax=Bacteria RepID=A7H8S0_ANADF Length = 149 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E V+DH + PRN G + P CGD + + ++ G++ D RF+ G Sbjct: 8 YQEVVLDHGKRPRNYGPLEGA---THRAEGLNPLCGDRITVAARLEG-GVVRDVRFEGSG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDE--------------------AQAIKNTDIAEELELPPV 102 C + AS+S++T KG++ E A + + + P Sbjct: 64 CAISKASASVMTGVAKGRTPAEIDAVFERFHRLVTEGPGAVDAGQLGKLAVFGGVHEYPT 123 Query: 103 KIHCSILAEDAIKAAIA 119 ++ C+ LA A++ A+ Sbjct: 124 RVKCASLAWHALRQALR 140 >UniRef50_Q1ATZ0 SUF system FeS assembly protein n=2 Tax=Bacteria RepID=Q1ATZ0_RUBXD Length = 161 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 8/127 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIK-VNDEGIIEDARFKTYGC 63 + ++DHYE PR+ G + D + G P CGDV+ + +K +D IED ++ GC Sbjct: 8 QILLDHYERPRHRGRLEEADVRMPG---GNPGCGDVVTIHLKGADDHRHIEDVTYEGEGC 64 Query: 64 GSAIASSSLVTEWV--KGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAIA 119 ++A++S++ E V + ++DE + ++ ++L ++ + C+ L +KAAI Sbjct: 65 TISMAAASMILEEVHERNLTMDEVLRMDYNEMIDKLGRQIVASRPKCATLGLGTLKAAIR 124 Query: 120 DYKSKRE 126 Y+ R Sbjct: 125 KYQKDRR 131 >UniRef50_Q07HZ2 Nitrogen-fixing NifU domain protein n=7 Tax=Rhodopseudomonas palustris RepID=Q07HZ2_RHOP5 Length = 339 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 79/126 (62%), Gaps = 5/126 (3%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTYG 62 +++ +H+ NP+NVG + G VGA GD +KL ++++ IE ARF+TYG Sbjct: 8 TDRFGEHFANPKNVGVLAEAN---AVGSVGALDYGDAVKLMLRIDPATDRIEQARFQTYG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADY 121 C SAIA+SS +TE + GKS+DEA I D+AE LP +++CS++ +A++ AIA Y Sbjct: 65 CSSAIAASSAITEMIIGKSIDEALEISAADVAEFLGGLPDERMYCSVMTYEAVQKAIAAY 124 Query: 122 KSKREA 127 + EA Sbjct: 125 RHPEEA 130 >UniRef50_A9NHI3 SUF system FeS cluster assembly protein n=10 Tax=Bacteria RepID=A9NHI3_ACHLI Length = 148 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 22/143 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++DHY+NP+N G ND++ + + P CGD + +Q+ + D II D + + G Sbjct: 7 YRSVIMDHYKNPKNKGLI--NDDSYLTVHLNNPTCGDDLIVQLLIKDSKII-DLKQQGKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA--------IKNTDI-----------AEELELPPVK 103 C AS+S+ +E +K K + EA+ + +I E + P + Sbjct: 64 CSICCASASVASELLKNKDIFEAKELIQTFYDMLTGEEIKDKSVLEDALAFEGVGQFPAR 123 Query: 104 IHCSILAEDAIKAAIADYKSKRE 126 I C+ LA A + + + ++ Sbjct: 124 IKCATLAWKAYEKGLNPLEGEQN 146 >UniRef50_B1ML97 Similarity with Nitrogen-fixing NifU-like proteins n=2 Tax=Mycobacterium RepID=B1ML97_MYCA9 Length = 133 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 +S VIDH+ NPRN G D D + +G P CGD + L ++ DE ++ F+ YG Sbjct: 4 FSPAVIDHFTNPRNAGRLDQADV---TAFIGNPVCGDQILLSAQIRDE-VVSRIGFEAYG 59 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADY 121 C +++A +S++TE + G + + + I+ + E L P + H + L D + +Y Sbjct: 60 CSASLAVASILTERLSGMPVRDIETIQAAQVIEWSGGLSPEQQHVAALGADVAQRLANNY 119 Query: 122 KS 123 ++ Sbjct: 120 RN 121 >UniRef50_UPI0001C31C45 nitrogen-fixing NifU domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C45 Length = 137 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENV-GSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +++HY+ P N + + P CGD +++QI V+ E +E RF + Sbjct: 5 YREYILEHYKRPHNWSPPEEELVSPDLEFEDSNPLCGDTLRVQIAVDAENRVEQIRFSGH 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE--LELPPVKIHCSILAEDAIKAA 117 GC + A++S+ ++ VKG +++ + + + E +++ ++ C++L+ +K+A Sbjct: 65 GCAISQAAASMSSDEVKGMPVEDLMRLDKSFVLELLGIDISATRMKCALLSLKVLKSA 122 >UniRef50_C1ZK76 Iron-sulfur cluster biosynthesis protein, NifU-like protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK76_PLALI Length = 142 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 6/118 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH+E+P + G + P CGD +KL++K++ IE+A F+ G Sbjct: 9 YDDYILDHFESPYHCGKLECPSCAHAD---KNPLCGDQIKLELKLDGS-TIEEAWFQGRG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAI 118 C + A +S++ E ++GK+L+E + ++ D+ + L++P + C +LA +K + Sbjct: 65 CAISQAGASILCEHIEGKTLEELRDMQGQDMLDLLKVPLTASRQKCGLLAFRVLKTLV 122 >UniRef50_Q1WR14 IscU protein n=10 Tax=Lactobacillus RepID=Q1WR14_LACS1 Length = 149 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 23/143 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++ +PR+ G +N V + P CGDV+ L + D I+D F YG Sbjct: 8 YRQAILEEANHPRHKGKLENESVEV---ELRNPTCGDVITLTALIEDNK-IKDIAFDGYG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA-------------------IKNTDIAEELELPPVK 103 C + +S+S++T V K D + + I E ++ P + Sbjct: 64 CTISQSSASIMTNEVLNKDFDTIKNMVLSFSDMITKEVKPDRKVLGEAIILEGVKQFPAR 123 Query: 104 IHCSILAEDAIKAAIADYKSKRE 126 I C++L+ AI I Y+ K E Sbjct: 124 IKCAMLSWKAIYQLIEKYEGKGE 146 >UniRef50_Q1DD56 SUF system FeS assembly protein, NifU family n=2 Tax=Bacteria RepID=Q1DD56_MYXXD Length = 152 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E V++H + PRN + P CGD + + +KV G+I+D F+ G Sbjct: 11 YQEVVLEHSKRPRNYRVVEGA---TAEAAGHNPLCGDQLVVTLKVEG-GVIKDVAFQGQG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT--------------------DIAEELELPPV 102 C + AS+SL+T VK ++ EA+ + + + P Sbjct: 67 CAISKASASLMTGAVKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSGVSEFPA 126 Query: 103 KIHCSILAEDAIKAAIA 119 ++ C+ LA ++AA+ Sbjct: 127 RVKCASLAWHTLRAALE 143 >UniRef50_A8DR52 NifU n=1 Tax=uncultured bacterium RepID=A8DR52_9BACT Length = 311 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 18/138 (13%) Query: 3 YSEKVIDHYEN------PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE------ 50 YS+KV+ + + ++G +N D G G G+ CGD ++ +V Sbjct: 5 YSDKVLKLFMDAVKGETGTHMGELENPD---GFGEHGSIVCGDTLRFTFRVERHLTDPTR 61 Query: 51 GIIEDARFKTYGCGSAIASSSLVTEWVK--GKSLDEAQAIKNTDIAEELE-LPPVKIHCS 107 II AR+ T+GC SAIA+S + ++ GK+ EA + N D+ + L+ LP KIHCS Sbjct: 62 DIITQARYLTFGCTSAIAASEALCTLLEEQGKTPIEALQVSNQDLIDFLDGLPEQKIHCS 121 Query: 108 ILAEDAIKAAIADYKSKR 125 ++ +A++ A+AD+ SKR Sbjct: 122 VMGAEALQKAVADWASKR 139 >UniRef50_Q023P2 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023P2_SOLUE Length = 118 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 8/122 (6%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E+++DH++NPRNVG + V V PACGD+++L EG I +A +K Sbjct: 1 MYPERLLDHFQNPRNVGELPSPAITV---EVSNPACGDILRLSALF-TEGRIAEASYKVR 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAED---AIKAA 117 GC ++IA+ S +TEW+ GK+ DE T I E + LP H ++L D A++ A Sbjct: 57 GCTASIAAGSALTEWLAGKTRDELSRFTATLIDEAVGGLPTASKHAAVLCADGVKALRRA 116 Query: 118 IA 119 + Sbjct: 117 LD 118 >UniRef50_Q03A02 Fe-S cluster formation protein, NifU-like n=8 Tax=Lactobacillus RepID=Q03A02_LACC3 Length = 148 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 23/131 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++D ++PR+ G D + V P+CGDV+ LQIK D G + D F Sbjct: 9 MYRAVILDEAQHPRHHGVLPAFDHEI---TVRNPSCGDVLHLQIK-EDAGRVTDVAFSGS 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDE-------------------AQAIKNTDIAEELELPPV 102 GC + AS+SL+TE + GK+ + A + + + + + P Sbjct: 65 GCTISQASASLMTEQIIGKTPADIEQMVEAFSDLIINGDVPNADILGDAAVLKGVHQFPA 124 Query: 103 KIHCSILAEDA 113 +I C+ LA A Sbjct: 125 RIKCATLAWKA 135 >UniRef50_C8X380 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X380_DESRD Length = 143 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 6/118 (5%) Query: 11 YENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 + NP +VG+F D G G + CGD ++++I V EG I +ARF T GCG +I S Sbjct: 31 WRNPIHVGTFSQPD---GVGDLTG-ECGDSIQIEILVR-EGRIHEARFWTDGCGPSIVSG 85 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADYKSKREA 127 + E GKSL+EA +++ +I E LP K HC+ LA ++ A+ Y R+ Sbjct: 86 CVACELACGKSLEEAASLQAGEILEYLGGLPEDKEHCAHLAARTLQEAVDAYMRSRQG 143 >UniRef50_Q9X192 NifU-like protein n=8 Tax=Thermotogaceae RepID=NIFU_THEMA Length = 142 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 22/138 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YSE ++D+ + + G D+ +CGD + L +KV D G+++DA+F+ Sbjct: 5 MMYSEAILDYANSKKFRGKLDDATV---IEEGKNISCGDEITLYLKVED-GVVKDAKFEG 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQ------------------AIKNTDIAEELELPPV 102 GC + AS+SL+ E + G+ ++E +KN + +++ P Sbjct: 61 MGCVISQASASLMLERIIGERVEEIFSLIEEAEKMSRGENFDEGKLKNVTLMSDIKNYPA 120 Query: 103 KIHCSILAEDAIKAAIAD 120 ++ C ILA +K A+ Sbjct: 121 RVKCFILAWKTLKEALKK 138 >UniRef50_A0QX03 SUF system FeS assembly protein, NifU family protein n=20 Tax=Actinomycetales RepID=A0QX03_MYCS2 Length = 164 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 25/143 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 Y E ++DHY++P + G + V P CGD + L++ ++D+G +ED + Sbjct: 6 MYQEVILDHYKHPHHRGLREPFGAEVHHV---NPTCGDEVTLRVTLSDDGESVEDVSYDG 62 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQA---------------------IKNTDIAEELEL 99 GC + A++S++T+ V G+S+ +A I + + Sbjct: 63 QGCSISQAATSVLTDQVIGQSVGDALKTVDAFTEMVSSRGTVEGDEDVIGDGIAFAGVAK 122 Query: 100 PPVKIHCSILAEDAIKAAIADYK 122 P ++ C++L A KAA+A+ + Sbjct: 123 YPARVKCALLGWMAFKAAVAEAR 145 >UniRef50_A9BJG9 SUF system FeS assembly protein, NifU family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJG9_PETMO Length = 145 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 23/135 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+ ++D+ +N R N + G +CGD + L +KV D II++ F +G Sbjct: 12 YSDIILDYAKNERYKKEIQNAKKAEG----KNLSCGDEITLYLKVEDN-IIKEITFTGHG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEELELPPVKI 104 C + AS+S++ E+++GK++DEA I +I ++ P++ Sbjct: 67 CIISQASASMMCEYLEGKTVDEANKIFQEIIKMSQGKEFDKELVDGIEIFSDISKFPMRT 126 Query: 105 HCSILAEDAIKAAIA 119 C LA + A+ Sbjct: 127 KCFTLAWHTLDDALN 141 >UniRef50_C5NYL7 SUF system FeS assembly protein, NifU family n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL7_9BACL Length = 142 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 71/136 (52%), Gaps = 23/136 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DH ++PRN G +++ + P+CGD + + +K+ D+ IIED +F G Sbjct: 10 YKQVILDHSKHPRNNGEIESS----YKLEMLNPSCGDKITVSMKLVDD-IIEDIKFVGTG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEA------------------QAIKNTDIAEELELPPVKI 104 C ++AS+S++TE +KG S+++A + ++++ + + P ++ Sbjct: 65 CSISLASASMLTEELKGLSVEKANDKIKDFLNMIMGNEFNEENLEDSISLQNISQLPARV 124 Query: 105 HCSILAEDAIKAAIAD 120 C+ LA + + + Sbjct: 125 KCATLAWKITEKILEE 140 >UniRef50_B0S0D2 Iron-sulfur cofactor synthesis protein NifU homolog n=20 Tax=Clostridia RepID=B0S0D2_FINM2 Length = 151 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 25/143 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +++ + N ++ + P+CGD + LQ+KV D+ IED + G Sbjct: 7 YTELILEKSRDKSNRRELEHP---THCELGHNPSCGDEITLQLKVQDD-TIEDIAYTGMG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+S++ + +KGKS++EA + N I + + P Sbjct: 63 CAISQASTSIMCDVIKGKSVNEAIDLCNKFISMIKGEITDRKELKVLKDAVCFQSISTLP 122 Query: 102 VKIHCSILAEDAIKAAIADYKSK 124 ++ C++L+ +K + + KS+ Sbjct: 123 ARVKCAVLSWYTLKDMLENDKSE 145 >UniRef50_A9A1A8 SUF system FeS assembly protein, NifU family n=4 Tax=cellular organisms RepID=A9A1A8_NITMS Length = 147 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 7/126 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++D+ NP N G +++D P CG D+ + D +F G Sbjct: 8 YHEMIVDYSRNPVNYGEIEDHDVTFHDA---NPLCG-DSIDIDMKIDDDKVTDIKFHGKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP---PVKIHCSILAEDAIKAAIA 119 C +A SS++TE KGKSL++ + I+ D+ EL L V+I C++L+ +K+A+ Sbjct: 64 CAICMACSSVLTEITKGKSLEDVKNIEKNDVLSELGLEHLQAVRIKCALLSLKVLKSALY 123 Query: 120 DYKSKR 125 Y +K Sbjct: 124 TYLAKH 129 >UniRef50_B7EPE4 cDNA clone:J013066C15, full insert sequence n=1 Tax=Oryza sativa Japonica Group RepID=B7EPE4_ORYSJ Length = 123 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 53/72 (73%), Positives = 65/72 (90%), Gaps = 1/72 (1%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKT 60 AY E+V+DHYENPRNVGSF+N+D +VG+G+VGAPACGDVMKLQI+V++ G I DA FKT Sbjct: 33 AYHERVVDHYENPRNVGSFENDDPSVGTGLVGAPACGDVMKLQIRVDESSGKIVDACFKT 92 Query: 61 YGCGSAIASSSL 72 +GCGSAIASSS+ Sbjct: 93 FGCGSAIASSSV 104 >UniRef50_Q21XB3 SUF system FeS assembly protein n=6 Tax=Bacteria RepID=Q21XB3_RHOFD Length = 162 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 24/135 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH PRN G D+ P CGD + + + + + +E F Sbjct: 9 YQEVILDHNRKPRNYGELDHPS---HHAEGVNPLCGDHIHVALDLKGDS-VERIAFHGES 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI------AEELELP--------------PV 102 C AS+S++T VKGKS EA+ + + + + P P+ Sbjct: 65 CAICKASASMMTVAVKGKSAIEAKTLIHEFVDMATGRIAAKDSPHIGRLAVFSGISELPM 124 Query: 103 KIHCSILAEDAIKAA 117 ++ C+IL ++AA Sbjct: 125 RVKCAILPWHTLQAA 139 >UniRef50_B9L0V2 NifU family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0V2_THERP Length = 144 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGC 63 E + DH NPR+ G ++ + G P CGDV+ + +K+ +G IED F GC Sbjct: 7 ELLRDHVRNPRHHGPLEDATIVL---EGGNPECGDVVTVYLKIAPDGETIEDVHFTGQGC 63 Query: 64 GSAIASSSLVTEWV-KGK-SLDEAQAIKNTDIAEELELPPV--KIHCSILAEDAIKAAIA 119 G + A++SL+ E + +G ++ A+ + + + + + C+ LA +KAAI Sbjct: 64 GVSQAAASLLMERLHQGHWTIGRIAAVDFSLVQDLVGPEAARSRPRCASLALSVLKAAIQ 123 Query: 120 DYKSKRE 126 Y+ +R Sbjct: 124 KYERERR 130 >UniRef50_Q3JQE2 SUF system FeS assembly protein, NifU family n=32 Tax=Burkholderiales RepID=Q3JQE2_BURP1 Length = 163 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 23/136 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E +++H PR G P CGD +K+Q+++ G I D RF +G Sbjct: 18 YQELIVEHKRAPRRFGKLAEP---THEARGHNPQCGDDLKVQLRIEG-GRIGDIRFDGHG 73 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-------------------EELELPPVK 103 C IAS+S++TE V G+ +D A+A++ A + P + Sbjct: 74 CAICIASASMMTEAVIGRDVDAARALQQRFCAVLTGQAEHDEAYLGKLSSLVAVRRYPSR 133 Query: 104 IHCSILAEDAIKAAIA 119 I C++L A+ A+ Sbjct: 134 IKCALLGWHALAHALD 149 >UniRef50_C4Z7J6 Nitrogen fixation protein NifU-like protein n=10 Tax=Bacteria RepID=C4Z7J6_EUBE2 Length = 146 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 24/142 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Y+E + DH +P + DN D + P+CGD + L++K +D + I D F Sbjct: 7 YNEVLTDHNMHPYHKHDIDNADLEL---EGVNPSCGDDIILKLKFDDAKKTIVDGAFTGD 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI------------KNTDIAEELEL--------PP 101 GC + AS+ ++ E + GK +DEA + +I E E P Sbjct: 64 GCAISQASADIMLELIIGKPIDEAVHLSELFLKMIKDEATEEEIDELDEAGALRDISHMP 123 Query: 102 VKIHCSILAEDAIKAAIADYKS 123 ++ C++L ++ + + K+ Sbjct: 124 ARVKCAVLGWHTMEEMVENLKN 145 >UniRef50_A0LFU2 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFU2_SYNFM Length = 144 Score = 108 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS K I + ++G+ + D S M G CGD M + +KV D G+I D +++ Sbjct: 24 GYSRKAIRLFIEKPHMGTIPDADHV--SEMTG--TCGDTMSVCLKVQD-GVIRDLKYQVL 78 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIAD 120 GC A+AS+ E +KGK+++EA+++ + DI E+P K HC LA +K A+ + Sbjct: 79 GCPGAVASAMAAVELIKGKTIEEARSLNDGDIFRLLEEIPAQKHHCIQLAVKTLKKALDE 138 Query: 121 YKSK 124 Y K Sbjct: 139 YARK 142 >UniRef50_B8FAZ4 Nitrogen-fixing NifU domain protein n=2 Tax=Desulfobacteraceae RepID=B8FAZ4_DESAA Length = 146 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 6/128 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS+K I +Y + +G + ++ + P CGD MK+ +K+ D+ I+DA+ + Sbjct: 22 GYSDKAIQYYVERKGMGKLEEANQIT---ELTGP-CGDTMKVFLKIEDDK-IQDAKIQVL 76 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GC AI+S+ + + KGK+L+EA+ I I +ELE +P K HC L ++ AI + Sbjct: 77 GCPGAISSAMVAMDMAKGKTLEEAKTITEGVIFKELENIPDQKQHCIQLTVKTLQNAIEE 136 Query: 121 YKSKREAK 128 Y+ K Sbjct: 137 YQKGNNHK 144 >UniRef50_B8CH94 FeS assembly protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH94_SHEPW Length = 122 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 70/120 (58%), Gaps = 6/120 (5%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y++ +ID++ NP+ VG ++ D +G P CGD + +Q+ + + I ++ F+ + Sbjct: 1 MYNDIIIDNFSNPKFVGDLESADYKF---EIGNPVCGDRIHMQVSFDGDN-IRESSFRAW 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSI-LAEDAIKAAIA 119 GC +++A++++ + + GKS+DE + +I++ EL P + HC L+E + A+A Sbjct: 57 GCATSVATANIFCDSIIGKSIDEISMRQADEISDMLGELEPSQQHCINILSELHRELALA 116 >UniRef50_C6C1H8 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H8_DESAD Length = 141 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 6/116 (5%) Query: 11 YENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 + NP + +N D +G V CGDV+K+ +K+ D + +A F T GCG +I SS Sbjct: 31 WHNPTYARTMENPDS---TGEVRG-NCGDVIKIFLKI-DNNTVSEASFFTTGCGPSIVSS 85 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADYKSKR 125 +V E GK++D A I DI E LP K HC+ LA A++ A+ ++ K+ Sbjct: 86 DMVCELCMGKNIDAASEIDGEDILERLGGLPEDKTHCAHLASSAMQEALGNWMEKK 141 >UniRef50_A5D4Q3 NifU homolog n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4Q3_PELTS Length = 150 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 53/100 (53%), Gaps = 5/100 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+ VIDH NPRNVG+ N D CGD M + +KV D I +A F T G Sbjct: 17 YSDTVIDHARNPRNVGNIPNCDGFSQE----TGECGDTMAIWLKVIDNK-INNATFWTDG 71 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV 102 CG+ IA S+VTE K S++EA IK DI L P Sbjct: 72 CGTTIACGSMVTEMAKNLSVEEALKIKAEDILNALGGLPE 111 >UniRef50_D1C3Y7 Nitrogen-fixing NifU domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3Y7_SPHTD Length = 167 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKTYGC 63 E ++DHYE+PR+ + + D + G P CGDV+ + + V+++G ++D F GC Sbjct: 8 EMLLDHYEHPRHRHADEGADVVMPG---GNPGCGDVITVYLTVDEDGKSVKDVSFVGEGC 64 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-----ELPPVKIHCSILAEDAIKAAI 118 + A++S++ E + + D I NTD + E + C+ LA +KAA+ Sbjct: 65 TISQAAASILMEMIHDEKWD-LDTIVNTDYHAMMDILGAEAVQSRPKCATLALGTLKAAV 123 Query: 119 ADYKSKR 125 Y R Sbjct: 124 QKYLRDR 130 >UniRef50_B7K023 SUF system FeS assembly protein, NifU family n=2 Tax=Cyanothece RepID=B7K023_CYAP8 Length = 144 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 26/138 (18%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVG-APACGDVMKLQIKVN-DEGIIEDARFKTY 61 + ++DHY+ P + G V G P CGD++ L I++N E IIED +F+ Sbjct: 5 QQLILDHYKQPHHRGR----TALVHRSHQGRTPYCGDIINLTIQLNASEEIIEDLQFEGN 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKN----------------TDIAEELEL----PP 101 GC +AS+ L+ E V+GK + EA + ++A+ L P Sbjct: 61 GCVICLASADLMAEAVRGKRVHEALQMVEQFRQMMQGQGKFPDYPQELAKLNSLQTITHP 120 Query: 102 VKIHCSILAEDAIKAAIA 119 ++I C+ LA +KAA++ Sbjct: 121 LRIKCANLAWYTLKAALS 138 >UniRef50_C0WNL2 Iron-sulfur (Fe-S) cluster formation protein IscU n=4 Tax=Lactobacillus RepID=C0WNL2_LACBU Length = 151 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +IDH + PR+ G + G + P CGDV+K+ + V D G I D F G Sbjct: 10 YKTVIIDHAQFPRHKGELADP---TGEKCLKNPTCGDVIKVSVVVKD-GQINDVAFDGSG 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA---------------------IKNTDIAEELELPP 101 C + AS+SL+T + GK + A+ + + I + P Sbjct: 66 CTISQASASLMTTVLIGKDVKTARKLILAFSKLISGDEIDDEDEELLGDAAIVGTVAEFP 125 Query: 102 VKIHCSILAEDAIKAAIAD 120 +I C+ LA A+ + + Sbjct: 126 TRIKCAALAWHAMDEVLNE 144 >UniRef50_C3RKP2 SUF system FeS cluster assembly protein n=6 Tax=Bacteria RepID=C3RKP2_9MOLU Length = 142 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 21/138 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M + ++DHYENPRN G D D+N S + + C D + +Q + D G+I+D RF Sbjct: 7 MMLRQIIMDHYENPRNHGLVD--DDNYQSVNMDSETCIDDIDVQALIED-GVIKDIRFDG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNT------------DIAEE------LELPPV 102 C AS+S+++E + GK++DEA I +I EE Sbjct: 64 EACAICTASTSIMSELLIGKTIDEANVIIENYNNMIYEKDYDPEILEEAIAFMNTHKQAN 123 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ L IK + Sbjct: 124 RIKCATLGWTGIKQILDK 141 >UniRef50_A6Q975 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q975_SULNB Length = 152 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN---DEGIIEDAR 57 M +VI+H NP+N GS + GM P G+ + + ++V +E I D + Sbjct: 1 MTMDAQVIEHMMNPKNYGSLPGTN---AEGMGKNPENGEKVAIYMRVETDEEEPYIGDIK 57 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAA 117 F+ GC + + + S++TE KG +L+ A + + + +LP CS + AIKAA Sbjct: 58 FQAIGCTTTVVAGSMLTEEAKGLNLNGAYNLVDATMKLLEKLPAEDAACSEMVALAIKAA 117 Query: 118 IADYKSKRE 126 + Y ++E Sbjct: 118 VDTYVKRQE 126 >UniRef50_B9KY40 NifU family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY40_THERP Length = 156 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 8/126 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGC 63 E++++HY PR+ + + D + G P CGD++ + +KV+++G +I +A F+ GC Sbjct: 2 EQIVEHYRRPRHRHALPDADVVMPG---GNPGCGDIVTIYLKVDEQGHLIAEASFEGEGC 58 Query: 64 GSAIASSSLVTEWVKGK--SLDEAQAIKNTDIAEELELPPV--KIHCSILAEDAIKAAIA 119 + A++ ++ + V + +L++ + E + V + C+ LA +KAA+ Sbjct: 59 TISQAAADILLDVVNEERWTLEQVLEADYHLMEELIGEEAVKLRPRCATLALGTLKAAVT 118 Query: 120 DYKSKR 125 Y + Sbjct: 119 KYLRDQ 124 >UniRef50_Q0AAQ4 SUF system FeS assembly protein, NifU family n=5 Tax=Proteobacteria RepID=Q0AAQ4_ALHEH Length = 171 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 22/136 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+ H PRN + P CGD +++ +++++ G + A F Sbjct: 31 YRKIVLAHNRQPRNHHPLE---PCSHHAEGYNPVCGDHIQVYLRLDEAGRVAAASFTGEA 87 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIK-------NTDIAEELELP------------PVK 103 C ASSS++TE V G E A+ D A+ LP P + Sbjct: 88 CAICTASSSMMTEVVAGLDASEVAALFRRFEAMLTEDPAQGESLPGELPVLAGVRHFPGR 147 Query: 104 IHCSILAEDAIKAAIA 119 C+ L+ + AA+ Sbjct: 148 TKCATLSWHTLLAALE 163 >UniRef50_B8FN62 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN62_DESAA Length = 142 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS++V + + +P+ G ++ SG V +CGD M++ +K+ D GI+ D+ F T G Sbjct: 24 YSKEVYERWRDPKRFGRMEDA---TASGKVRG-SCGDSMEIYLKIED-GIVIDSSFFTDG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADY 121 CG +++S S+ + K ++ I I E LP +HC+ LA A+ A+ Y Sbjct: 79 CGPSVSSGSMAADLAMKKGVEALTDITGEVILEALGGLPEESLHCAGLAASALSDAVDSY 138 >UniRef50_C9KQH6 SUF system FeS assembly protein, NifU family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQH6_9FIRM Length = 148 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 64/139 (46%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E + +H NP N + + P+CGD + L++++ + G+++DA F G Sbjct: 7 YTELIGEHSRNPENKHHLAHATCAL---KGHNPSCGDEITLELQI-ENGVVKDASFTGVG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+ ++ + ++G+ +++A+ + I + + P Sbjct: 63 CAISQASTDIMIDLIRGQKVEKARELAEKFIGMIKREITDESELEELDEALALQNVSNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA + A+A Sbjct: 123 ARVKCAVLAWHTLDNALAK 141 >UniRef50_C8P0L7 NifU domain protein n=2 Tax=Erysipelotrichaceae RepID=C8P0L7_ERYRH Length = 146 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 13/124 (10%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++DHYENPRN DE V +C D + +Q + G+IED F C Sbjct: 11 RQLIMDHYENPRNK----RTDETYPKKRVSTDSCIDDLTIQAFIK-NGVIEDVCFDGQAC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKS 123 A +++S++TE VKGK++ EA I IAE + IH E ++ A+A Sbjct: 66 TIATSAASIMTELVKGKTVAEADQI----IAEYNRM----IHLENFDEQLLQEAVAFKNV 117 Query: 124 KREA 127 R+A Sbjct: 118 GRQA 121 >UniRef50_C1AC48 Iron-sulfur cluster biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC48_GEMAT Length = 148 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 22/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++ H+ P N + + S + P CGD +++ ++V+ G + D F Sbjct: 13 MYQEALLAHHRAPHNRRDMPDAN---ASAVFKNPVCGDEIQVFVRVDG-GHLVDVSFTGR 68 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT---------------DI---AEELELPPVK 103 GC A AS+S++T+ V G S+ EAQ + D+ + P + Sbjct: 69 GCSIATASASMMTDAVMGLSVSEAQGLSAALERTLVSPDETVALPDVLVPLRSVAPFPGR 128 Query: 104 IHCSILAEDAIKAAIAD 120 C +A A+ A+ + Sbjct: 129 HGCVRMAWQALHQAVQN 145 >UniRef50_D1AKY8 SUF system FeS assembly protein, NifU family n=6 Tax=Bacteria RepID=D1AKY8_SEBTE Length = 148 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 25/140 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++++ ++ P CGD + L+IK+N + IIEDA F G Sbjct: 7 YQQTILEYSSRKDLKREIESPTY---IERGHNPNCGDDLTLEIKLNSDNIIEDAAFLGNG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEA----------------------QAIKNTDIAEELELP 100 C + AS++++ + +KGKS++EA + + + + E + Sbjct: 64 CAISSASTAMLIDLIKGKSIEEAKEKTDIFFKMMGQKEKLNSDEMKKLGDAVLMEYVANM 123 Query: 101 PVKIHCSILAEDAIKAAIAD 120 P +I C+ L+ ++K I Sbjct: 124 PARIKCATLSWHSLKVIIDK 143 >UniRef50_A9KE69 IscU n=6 Tax=Coxiella burnetii RepID=A9KE69_COXBN Length = 119 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS++V+ ++ + G D +D +V G + G + +L ++ ++ II +A+F+ Sbjct: 1 MQYSKEVLHYFFENVHAGELDKDDPHVRYGEIATSTEGHLFRLYLRCQND-IITEAKFQA 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAI 118 YG A A+ V W +GK+ DEA + + I + L L +++H ++L E K + Sbjct: 60 YGSVVATAACEYVCRWAEGKTFDEANHLDSDQIQKALNLSSLQVHAALLIERLWKKTL 117 >UniRef50_C1VDX7 Cysteine desulfurase n=2 Tax=Halobacteriaceae RepID=C1VDX7_9EURY Length = 543 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + V +HY NP+N G N S +CGD + + V ++G IE+ F++ Sbjct: 416 QYHDLVYEHYRNPQNTGGLSNPTFTKHSEET---SCGDDGEFHVDVAEDGTIENIAFESE 472 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKN-TDIAEELELPPVKIHCSILAEDAIKAAIAD 120 C + A +S+++E ++G SL+E + D + P ++ C + E+ I A + Sbjct: 473 SCAVSSAVASMLSERLEGMSLEEVAELDGFVDEVLDGTYPDIRRDCVVGPEEVICEAARE 532 Query: 121 YKSKREAK 128 + Sbjct: 533 QMDGSNGR 540 >UniRef50_B5JY19 FeS cluster assembly scaffold IscU n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY19_9GAMM Length = 122 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Query: 8 IDHYENPRNVGSFDNNDENVGSGMVGAPACGD-VMKLQIKVNDEGIIEDARFKTYGCGSA 66 + H++ PRNVG D+ E VGS G G+ +++Q+ V D IE FK YG G+ Sbjct: 1 MAHFDQPRNVGELDDTQEGVGSACAGDAHRGEHQLRIQLYVGDSDCIEKTAFKAYGSGAV 60 Query: 67 IASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 IAS S TEW KGK+L + + + E L+L + ++ A+ A D + K+ Sbjct: 61 IASCSFATEWAKGKTLAQLSDLDAVALCEALQLEDSERGLAVQVCQALNRAGDDIEQKQN 120 Query: 127 A 127 A Sbjct: 121 A 121 >UniRef50_Q1IN98 Nitrogen-fixing NifU-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IN98_ACIBL Length = 120 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 5/113 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS +++DH+ENPR G V + PACGD+++L +++ EG++ + RF+ Sbjct: 1 MYSARLLDHFENPRYAGELPGATAKV---RIENPACGDILELAAEIH-EGVVREIRFRAK 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDA 113 GC A+A S + ++G+S+ + I+ D+ E+E +P H LA DA Sbjct: 57 GCVPAMACGSAIATLIQGQSVAQLLKIRREDVLREVESVPQASGHAVHLALDA 109 >UniRef50_C6MSR1 Nitrogen-fixing NifU domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MSR1_9DELT Length = 139 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 +S K+ DH NPRN G + D V G P GD + +K+ E ++ DARF G Sbjct: 5 FSTKIWDHARNPRNRGFLKDADVLV---QAGDPDKGDALLYLLKIEAEQVL-DARFLARG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADY 121 +A+A+SS+ TE GKSLDE AI++ IA LP K+HC +A A+ AA+ Y Sbjct: 61 SATAVAASSVATELAIGKSLDEVLAIRHGAIAAALGGLPEDKMHCCQMAVSALHAAVQQY 120 Query: 122 KSKRE 126 + E Sbjct: 121 RGTAE 125 >UniRef50_C0QAY3 Predicted iron-sulfur cluster assembly protein (NifU like protein) n=2 Tax=Deltaproteobacteria RepID=C0QAY3_DESAH Length = 149 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E+ + ++NPR G D+ D + + +G CGD M + K + ++E A + T GCG Sbjct: 26 EQGFERWQNPRFRGRLDDYDVHGHA--LGD--CGDSMDIYFKFERDRVVE-ASYMTDGCG 80 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIADYKS 123 S+ S E G +E I I A+ +P HC+ LA ++ A+ Y + Sbjct: 81 SSNVCGSFAAEMTIGMGAEELADITGDMILAKLGNMPEDDRHCAFLAAGTVQEALRIYMT 140 Query: 124 KREAK 128 + Sbjct: 141 GSRER 145 >UniRef50_B8FDL0 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDL0_DESAA Length = 133 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+K ++ + + G D D G CGD + I V + I+E RF G Sbjct: 12 YSDKFLELASDYNHAGIPDRYDARGGQ----TGQCGDTVHFFISVMHKRIVE-VRFALEG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADY 121 C +A ++ + E + K ++EA + + +AE LP HC+ LA A+ +AD Sbjct: 67 CMHTLACANAIVEMIAEKPVEEAWDVTDDAVAEYLGGLPEDHYHCAELAVGALYKTLADL 126 Query: 122 KSK 124 K+K Sbjct: 127 KTK 129 >UniRef50_A5ICQ0 NifU family iron binding protein, [Fe-S] cluster formation/repair protein IscU, HesB n=5 Tax=Legionella pneumophila RepID=A5ICQ0_LEGPC Length = 127 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACG-DVMKLQIKVNDEGIIEDARFK 59 M Y++ V D++ P+++G D ND V G+ P + + IK + + +I ARFK Sbjct: 1 MMYNKIVQDYFFQPQHIGKLDLNDPFV-IGVQSQPINQLNTVHFYIKCDGDKLISKARFK 59 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 T G IA+ + ++GK+L+ I + L++ + ++ ED K A+ Sbjct: 60 TNGNPYVIAAMEWICCQIEGKTLESLPLIDFQILINVLQITNNQYPVAVQVEDIYKEALT 119 Query: 120 DYKSKRE 126 + K E Sbjct: 120 LMRKKFE 126 >UniRef50_Q60A81 NifU family protein n=1 Tax=Methylococcus capsulatus RepID=Q60A81_METCA Length = 126 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 23/124 (18%) Query: 20 FDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKG 79 ++ + V P CGD + L +K++D G+I D F+ GC + AS+SL+TE V+ Sbjct: 1 MEDANRTV---EGFNPLCGDRITLYVKIDDAGVIRDVSFQGSGCAISTASASLMTEIVRN 57 Query: 80 KSLDEAQAIKNT--------------------DIAEELELPPVKIHCSILAEDAIKAAIA 119 EA A+ T + + P ++ C+ LA +++AA+ Sbjct: 58 MHESEAHALFETFHRIATGKDDAVNLEELGKLAVLAGVRAYPARVKCATLAWHSLEAALE 117 Query: 120 DYKS 123 + ++ Sbjct: 118 NQET 121 >UniRef50_B8FIH0 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIH0_DESAA Length = 149 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS I N G + D+ V P CGD + + +++ EG ++ A+ Sbjct: 23 GYSATAIKFCNEQPNRGVLSDADQ---VSEVAGP-CGDSITVYLRIR-EGKVDRAKALVS 77 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GC A+AS+ E VKGK+L EA AI+ DI LE LP K C L+ A+ A+ + Sbjct: 78 GCPGAVASAMAAMELVKGKTLTEALAIEEKDIVRMLEYLPDEKQDCIQLSAKALHKAVEE 137 Query: 121 Y 121 Y Sbjct: 138 Y 138 >UniRef50_A1ZYV1 SUF system FeS assembly protein, NifU family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYV1_9SPHI Length = 142 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 21/135 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++ H + P N F +E P CGD +L I + +I+ A F YG Sbjct: 9 YQSVILTHNKTPHN---FKKAEELPLHSEAYNPLCGDHFQLYISLEGA-VIQQAFFHGYG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-----------------AEELELPPVKIH 105 C + AS+S++ + ++GK+L EA+ + T + + P + Sbjct: 65 CAVSKASTSVLLQTIEGKTLTEAKTLIETFMQVVNGELPANIPEGFKAFAAAKHFPSREQ 124 Query: 106 CSILAEDAIKAAIAD 120 C+ L+ A + I + Sbjct: 125 CATLSWQAFQTLIDE 139 >UniRef50_A4EB20 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB20_9ACTN Length = 144 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 25/137 (18%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 S ++H +P D P+CGD + LQ++V ++ +IE+A F +GC Sbjct: 7 STTFMEHNSHPDYKYEMDAP---THEHDGINPSCGDELTLQLRVEND-VIEEASFTGHGC 62 Query: 64 GSAIASSSLVTEWVKGKSLDEAQ-------------AIKNTDIAEELEL--------PPV 102 + AS+ ++ + + G++++EA+ + D+ + E P Sbjct: 63 AISQASADIMADLITGETVEEARRLAGLFLAMIRGEKLSEDDLEDLDEAAQLQDISHMPA 122 Query: 103 KIHCSILAEDAIKAAIA 119 ++ C+ LA + + Sbjct: 123 RVKCAELAWRTLDGMLE 139 >UniRef50_Q8F7C7 NifU-like protein n=6 Tax=Leptospira RepID=Q8F7C7_LEPIN Length = 263 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 3/108 (2%) Query: 16 NVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTE 75 N ++ VG CGD ++ +K++ + DA + T GCG I + ++ TE Sbjct: 18 NYREMEDATVVSNYRNVG---CGDGYRIYLKIDSSETVTDASYTTTGCGFGIVALAMATE 74 Query: 76 WVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKS 123 + KGK++++ ++I +TDI E P + + A A+ A+ DY+S Sbjct: 75 FAKGKTIEQLKSITSTDIEGMFEFPERRKNYPESAVAALLQAVRDYES 122 >UniRef50_Q04EW3 Fe-S cluster formation protein, NifU-like n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04EW3_OENOB Length = 146 Score = 98.4 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 23/137 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++D + R G N + P CGDV++LQIKV+D I F+ G Sbjct: 10 YRQVILDAAVDQRYRGQLLNP---TAVQLAHNPNCGDVLELQIKVSD-RHITAIAFQGQG 65 Query: 63 CGSAIASSSLVTE-------------------WVKGKSLDEAQAIKNTDIAEELELPPVK 103 C + AS+S++ + + GK E + + + ++ P + Sbjct: 66 CTISQASASILADLALHQSLESMQTRISQFQKMITGKESVEIDQLGDASVFSKISQFPTR 125 Query: 104 IHCSILAEDAIKAAIAD 120 + C+ L DA++ + + Sbjct: 126 VKCAGLVWDALEQMLKN 142 >UniRef50_Q1J1X4 SUF system FeS assembly protein n=4 Tax=Deinococci RepID=Q1J1X4_DEIGD Length = 140 Score = 98.0 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 23/134 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + + DH ++PR G V P CGD + + +V ++E RF GC Sbjct: 8 RQIITDHSQHPRGRGEI----AGVPHATRENPGCGDQVTVWARVEGGRLLE-VRFTGRGC 62 Query: 64 GSAIASSSLVTEWVKGKSLDE-AQAIKNTDIAEELELPP-----------------VKIH 105 + AS+SL+T+ + GK L+E E PP + Sbjct: 63 AISQASASLMTQALAGKGLEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHARRK 122 Query: 106 CSILAEDAIKAAIA 119 C++LA A++AA+A Sbjct: 123 CALLAWQALEAALA 136 >UniRef50_Q2LWF0 NifU-like protein involved in Fe-S cluster formation n=3 Tax=Syntrophus aciditrophicus SB RepID=Q2LWF0_SYNAS Length = 238 Score = 98.0 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 11/117 (9%) Query: 10 HYE-NPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIA 68 HY NPR +N D G V +CGD M++ +K N +ED T GC + Sbjct: 28 HYLLNPR----MENPD---GIAKVTG-SCGDTMEIALKFNGPR-VEDVHCWTDGCAISKM 78 Query: 69 SSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADYKSK 124 V +GK++ E + I I E + +LP +HC++LAE ++ A++ Y K Sbjct: 79 CVETVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVLAETTLQKAVSFYTLK 135 >UniRef50_A8F547 Nitrogen-fixing NifU domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F547_THELT Length = 119 Score = 98.0 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YSEK + P + D + V P GD +++ +K+ + +I+D FK Sbjct: 1 MTYSEKFKQLFMYPAHANQID----YTHTAEVVYPEHGDRVRIFVKL-ENFLIKDISFKA 55 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 GC IA+S + V GK+++ A I I +E++ + C + +A+K A++ Sbjct: 56 IGCPRVIAASEALCRLVNGKNINIALEINEEHIRQEMDFHDKEFKCIMAPVEALKKALSK 115 Query: 121 YKSK 124 +++ Sbjct: 116 LENE 119 >UniRef50_A0LFS6 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFS6_SYNFM Length = 141 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAP--------ACGDVMKLQIKVNDEGIIEDA 56 +K +D + N +V + + + P CGD +++ + V D G I A Sbjct: 3 DKTLDFWRN-HSVRFLEMALTDHYREVPANPDGYARVVRECGDTVEMFLMVRD-GKIRTA 60 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIK 115 F+T GC ++A ++ G + +EA+ I I E LE LPP + HC+ A A++ Sbjct: 61 SFETNGCIYSVACANTAVHMASGLTPEEARRITPDQIVEFLETLPPEEEHCAEQAVKALR 120 Query: 116 AAIADYKSKRE 126 A+AD + Sbjct: 121 LALADARDGER 131 >UniRef50_C9LR10 SUF system FeS assembly protein, NifU family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR10_9FIRM Length = 149 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 66/147 (44%), Gaps = 25/147 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++ ++++ + N + + P+CGD + +++KV GII+D + G Sbjct: 7 YTDLILEYNRDKTNKRKVEAPTVH---EHGHNPSCGDDIDVEVKVEG-GIIKDLAYTGTG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA---------------------EELELPP 101 C + AS++++ E ++ +++DEA + +A +++ P Sbjct: 63 CAISQASTAMMAELLQDRTVDEAIRLCKLFLAMIRGDVKDEAALEELEAAYTLKDISQMP 122 Query: 102 VKIHCSILAEDAIKAAIADYKSKREAK 128 V++ C+ L ++ A+ + E K Sbjct: 123 VRVKCATLGWHTLEVALEKITADLENK 149 >UniRef50_Q03UL7 Fe-S cluster formation protein, NifU-like n=2 Tax=Leuconostoc mesenteroides RepID=Q03UL7_LEUMM Length = 144 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 21/137 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y + V+++ ++P + P CGD++ L ++ D+ + D F Sbjct: 8 LLYRQTVMEYAQHPHHYKPMLGT--ETYHVRKYNPTCGDIIDLAFEMTDDK-VTDIYFYG 64 Query: 61 YGCGSAIASSSLVTEWVKGKS-------LDEAQAIKNTDIAEELEL-----------PPV 102 GC + AS+S++T+ V G+ L+E + ++A+ L P Sbjct: 65 DGCAISKASASMMTDLVLGQRREAVATLLEEFSKLTRGEVADTKLLGEAQILAGVTKFPT 124 Query: 103 KIHCSILAEDAIKAAIA 119 +I C+ LA A+ ++ Sbjct: 125 RIKCATLAWHALDELLS 141 >UniRef50_C0VZ96 Possible iron-sulfur (Fe-S) cluster formation protein IscU n=3 Tax=Actinomycetales RepID=C0VZ96_9ACTO Length = 156 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y + ++DH G+ D S V P CGD + L + +++ G I + Sbjct: 6 VMYQQVILDHSRARCGSGTLP-VDIQTSSYQV-NPTCGDEVTLGLNLDEAGEITQLIWDG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQA-----------------------IKNTDIAEEL 97 GC + AS S+++E ++GKSL E I++ E Sbjct: 64 DGCSISQASLSIMSELLEGKSLAEIAQFYDDFETMMHSRGQGVDDDLLDRIEDGAALEGT 123 Query: 98 ELPPVKIHCSILAEDAIKAAIAD 120 P +I C++L A+K A+A Sbjct: 124 SKFPNRIKCALLGWYALKDALAK 146 >UniRef50_B8DUN6 SUF system FeS assembly protein, NifU family n=16 Tax=Actinobacteridae RepID=B8DUN6_BIFA0 Length = 191 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 67/170 (39%), Gaps = 43/170 (25%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSG-----------------MVGAPACGDVMKLQ 44 Y E ++D +P G+ + + G P CGD + + Sbjct: 12 MYQEVILDASRHPHGRGTLTSEGDPAAIGGEATVTAVHESCSAARSHQFNPTCGDEVTVH 71 Query: 45 IKVNDEG--IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQ---------------- 86 ++V+D IE + GC + AS S++ V+GK++DEA Sbjct: 72 VEVSDSEPHRIESVVWDGQGCSISQASLSIMVNLVEGKTVDEAMELFGQFHKLMESRGAG 131 Query: 87 --------AIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK 128 A+ + + + + P++I C++L + ++ ++A + + ++ Sbjct: 132 LDDEQAEDALGDAAVFQGVSKYPMRIKCALLGWEGLRDSLAKALASQHSE 181 >UniRef50_Q7MYK4 Similarities with nitrogen fixation proteins n=2 Tax=Photorhabdus RepID=Q7MYK4_PHOLL Length = 118 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 8/124 (6%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 ++ +ID++ NP G+ + +G P CGD + + + ++++G + +A F+ + Sbjct: 1 MFNNIIIDNFCNPDCQGTLSAPTIKLA---LGNPVCGDKVDIDLTLDNQGRVNNACFRAW 57 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIAD 120 GC +++A S+ KGK+L+E A+ I A EL P + HC D + Sbjct: 58 GCTASLAMSNQFCRHAKGKTLEELNALSPEGIDALLGELEPAQQHC----LDMLHKLFEQ 113 Query: 121 YKSK 124 K K Sbjct: 114 LKGK 117 >UniRef50_Q98AM0 Nitrogen fixation protein; NifU n=2 Tax=Mesorhizobium loti RepID=Q98AM0_RHILO Length = 153 Score = 96.1 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 78/130 (60%), Gaps = 10/130 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 +S+K+ ++ NP NVG D + +G VGA ACGD +KL + + + I A F+T+ Sbjct: 11 FSDKL--YFINPHNVGVLDIPN---AAGEVGAVACGDGLKLMMGFDPKTETITAATFQTF 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCS---ILAEDAIKAA 117 G GSAI +SS +T+++ GK++DEA I + ++A+ L LPP I+ S ++ E ++ Sbjct: 66 GRGSAITASSTITQFIVGKTIDEALQITDQEMADFLGALPPHTIYSSLDRLILERGLRLM 125 Query: 118 IADYKSKREA 127 + + R+A Sbjct: 126 SEFFHAVRQA 135 >UniRef50_Q6APN8 Related to nitrogen fixation protein (NifU) n=1 Tax=Desulfotalea psychrophila RepID=Q6APN8_DESPS Length = 136 Score = 95.3 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Query: 24 DENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLD 83 + +VG CGD M++ +++ D+ +E R+ + GC + +GK+++ Sbjct: 33 SPEATAKVVGN--CGDTMEMSLRIRDDR-VEKTRYSSDGCSISQQCIEAAAMLAQGKTIE 89 Query: 84 EAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 E + I + + +LP +HC+ LAE ++ AI DY K+ Sbjct: 90 EVRKINMMHVIDIVGDLPDSHLHCAQLAETTLQHAIGDYVQKQR 133 >UniRef50_A6Q4J9 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4J9_NITSB Length = 159 Score = 95.0 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTYGC 63 K ++ NP N G D G G+++ + +K++ II++ +++T GC Sbjct: 10 PKYLELMLNPTNYGEMKEYD---AKGFGKNAQTGEMVVIYLKIDPISTIIKEIKWQTNGC 66 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKS 123 G+ + S +L +E KGK+L + + PP C + A AA+ DY++ Sbjct: 67 GTTLVSGALFSEEYKGKTLQSGVEFTQDVFEKIKDNPPEDAACGEVVARAFMAAVQDYEA 126 Query: 124 KREAK 128 ++ + Sbjct: 127 RKRGE 131 >UniRef50_D2EEV4 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEV4_9EURY Length = 125 Score = 95.0 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 7/113 (6%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 +++ Y NP + G + S +P+CGD + + V + GI++DA F GC + Sbjct: 9 LVELYRNPEHYGKLSKYNY---SENGYSPSCGDKFSVYLDV-ENGIVKDASFDGKGCVIS 64 Query: 67 IASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP---VKIHCSILAEDAIKA 116 S S + ++ GK L E + ++ D+ L + ++ C+ + DA+K Sbjct: 65 TVSLSKLCSFLIGKPLKEIEKMELKDVESLLGIEDISISRVKCATVGLDAVKK 117 >UniRef50_Q03GT9 Fe-S cluster formation protein, NifU-like n=3 Tax=Lactobacillales RepID=Q03GT9_PEDPA Length = 146 Score = 94.6 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 22/130 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++H + P VG + + + P CGD +++ +KV D+ + E F G Sbjct: 8 YQKIIVNHAKYPIGVGVLPQYNYH---AKLKNPDCGDDIEVYLKVVDQHL-EQISFTGQG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI----------KNTDIAEELEL--------PPVKI 104 C + AS+S++ + + GK + EAQ + K+ D ++ +L P ++ Sbjct: 64 CIISQASASMMVDALSGKRILEAQQLMQNFQNLILGKDYDESQLGDLIAFATLNQFPTRV 123 Query: 105 HCSILAEDAI 114 C +LA A+ Sbjct: 124 RCGMLAWHAM 133 >UniRef50_C0GTN3 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTN3_9DELT Length = 139 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 6/118 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + +V ++NP + N+D +CG+ +++ + + E +I A F + G Sbjct: 24 FGPEVYRRWKNPDYMARMQNHDCMAAV----TGSCGNRVEIYLVLEQE-VIARATFFSEG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIA 119 CGS++ +S+ E +G++LD+A A+ D+ + +P K H + LA A+ AI Sbjct: 79 CGSSVVCASMTCELARGRTLDQALALGAGDVMQALPGMPGSKKHYAALAVKALHRAIE 136 >UniRef50_D0RPD7 SUF system FeS assembly protein, NifU family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPD7_9RICK Length = 152 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 27/149 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++H +NP N S P CGD +++ + ++ I ++ F+ G Sbjct: 7 YQQTILEHSKNPLNFKSLK---TCTHQANGNNPLCGDKVEIFTNIKND-INDEICFQGAG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-----------------------AEELEL 99 C +IAS+S++T+ + KS+ +++ I I EL+ Sbjct: 63 CAISIASASILTKVLNKKSVQDSKNILENFIKMVENKEFNFDLLNNEEKTLLMTFSELQK 122 Query: 100 PPVKIHCSILAEDAIKAAIADYKSKREAK 128 P++ C+ ++ AA+ EAK Sbjct: 123 FPMRSKCATMSWSTFNAALNRDNYNTEAK 151 >UniRef50_A8PKG9 NifU-like protein, putative n=1 Tax=Brugia malayi RepID=A8PKG9_BRUMA Length = 79 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 37/59 (62%), Positives = 53/59 (89%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFK 59 ++YSEK++DHYENP+NVGS D ND +VG+G++GAP+CG+V++LQI VND+ +IED +FK Sbjct: 8 ISYSEKILDHYENPKNVGSLDKNDPSVGTGLIGAPSCGNVIELQINVNDKDVIEDEKFK 66 >UniRef50_B1MVR5 NifU-like protein n=1 Tax=Leuconostoc citreum KM20 RepID=B1MVR5_LEUCK Length = 146 Score = 93.0 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 21/140 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+D+ ++P + D P CGD+++L + V + I+ F G Sbjct: 10 YRQAVLDYAQHPHHKAPVTKADSCQI--EQYNPTCGDIIRLALTVEHQTIVA-CHFDGEG 66 Query: 63 CGSAIASSSLVTEWVKGKSL------------------DEAQAIKNTDIAEELELPPVKI 104 C + AS+S++ + + +SL + + + + + + P ++ Sbjct: 67 CAISTASASIMMDLIIAQSLVTTKEQIKLFSRMVTGDDGDYKMLGDAQMLAGVTQFPARV 126 Query: 105 HCSILAEDAIKAAIADYKSK 124 C+ L A+ I + + Sbjct: 127 KCATLPWHALSLLIQQIEEE 146 >UniRef50_C7MD35 SUF system FeS assembly protein, NifU family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MD35_BRAFD Length = 152 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 60/139 (43%), Gaps = 26/139 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE--GIIEDARFKT 60 Y+E V++H + P + G + D V P CGD + L++ ++++ IED + Sbjct: 9 YTELVVEHDKRPLHAGLREPFDAEVHHV---NPTCGDEITLRLHLSEDVAERIEDLSYDA 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEA---------------------QAIKNTDIAEELEL 99 GC + AS+S++ + + G+++ E + + + Sbjct: 66 IGCAMSRASASIMADLLIGRTVAEIGPVQTHFEQVIGSRGRIGGDEELLGDGMALLGAAK 125 Query: 100 PPVKIHCSILAEDAIKAAI 118 P ++ C ++ A +AA+ Sbjct: 126 FPARVKCVLMPWKAYQAAL 144 >UniRef50_C8W9P1 SUF system FeS assembly protein, NifU family n=6 Tax=Coriobacteriaceae RepID=C8W9P1_ATOPD Length = 175 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 62/146 (42%), Gaps = 25/146 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ + +DH +P DN + P+CGD + +++ D G I +A F G Sbjct: 7 YNAEFMDHVSHPDYKYQMDNPTVSHAGV---NPSCGDELTFSVRIED-GKIAEAAFVGSG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEA---------------------QAIKNTDIAEELELPP 101 C + AS+ ++++ + ++ +EA +++ +I ++ P Sbjct: 63 CAISQASADIMSDLMIDRTPEEAIELCKLFGRMIRGEETDEAVLDKLEDANILHDIAHMP 122 Query: 102 VKIHCSILAEDAIKAAIADYKSKREA 127 ++ C+ LA ++ + + + A Sbjct: 123 ARVKCAELAWHTLEEMLEAHNNGSTA 148 >UniRef50_C7DHB6 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHB6_9EURY Length = 128 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 15 RNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVT 74 +N G + S + CGD + + + + D I+DA F+ GC + +A++ + Sbjct: 18 KNRGKPAKFN---ASANLENTMCGDDVTVYLSIQDNR-IKDASFEGEGCSATVAAADALM 73 Query: 75 EWVKGKSLDEAQAIKNTDIAEE--LELPPVKIHCSILAEDAIKAAIADY 121 E++K K +DE + + + +++ P + C L A+KAAIA+Y Sbjct: 74 EFIKSKEVDEVVSFGSDFMESLLNVKIEPSRSRCVNLGLRAVKAAIAEY 122 >UniRef50_A8ZSW4 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSW4_DESOH Length = 105 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 36 ACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE 95 CGD +++ IK + IIE F GC + AS++ V +GK ++ A I + + Sbjct: 13 ECGDTVEMFIKKGTDSIIEQVLFDIRGCRNTHASANAVAVLAEGKKIEAAWEITPEAVID 72 Query: 96 ELE-LPPVKIHCSILAEDAIKAAIADYKSKREA 127 LE LPP HC+ LA A A+AD +++ E+ Sbjct: 73 LLETLPPDHFHCAELAVGAFYLALADCRNQHES 105 >UniRef50_Q01180 Nitrogen fixation protein nifU n=6 Tax=Rhodobacter RepID=NIFU_RHOSH Length = 246 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 5/120 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 K +D + NPRN G + D G G+ GD ++L +++ + G + +ARF +G Sbjct: 7 KALDLFFNPRNAGPLEAAD---AVGTAGSLEVGDAIRLMLRI-EAGRVAEARFLAFGGAH 62 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIADYKSK 124 AIA S +T V G L A+A+ +I A LP + + A A++ A+A Y+ + Sbjct: 63 AIACGSALTVLVTGLDLAAARAVTPEEIEAAVGGLPAPRRPAAARAWSALQIALAAYEGR 122 >UniRef50_A1WM67 Nitrogen-fixing NifU domain protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WM67_VEREI Length = 130 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 6/114 (5%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 ++E ++ ++ +P D ++ +G P CGD +++Q+ V D G+I+ AR++ + Sbjct: 10 MFNEIIVKNFSDPAFASELDEATASI---EIGNPVCGDRIRVQLDVTD-GLIKRARYQAW 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAI 114 GC +++A+ ++ + GK L N DI EL P + HC + A+ Sbjct: 66 GCATSLATGNVFCACIDGKPLSVVLDTSNDDIETMLGELEPSQHHCLEM-LRAL 118 >UniRef50_Q65JA1 Fe-S cluster formation protein n=3 Tax=Bacillus RepID=Q65JA1_BACLD Length = 143 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 22/131 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++DH RN D + V P CGDVM L I + +E IEDA F G Sbjct: 8 YRSVIMDHARYRRNFRKIDKH--GVYYVHYKNPTCGDVMTLFIDIKNEK-IEDAAFIGDG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELPP-----------------VK 103 C ++ASSS++TE +KGK+L EA ++ ++ + E P + Sbjct: 65 CSISMASSSIMTELIKGKTLKEAGLMREAMENMIRKGEEPEEDLLGDAVSLIGVHPLRAR 124 Query: 104 IHCSILAEDAI 114 +C+++ A+ Sbjct: 125 HNCALMPWQAL 135 >UniRef50_A0LNT2 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNT2_SYNFM Length = 154 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 8/112 (7%) Query: 13 NPRN--VGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 NPR G S V P CG+ M++ +++ ++ I+ D F T GCG + A Sbjct: 31 NPRQIKFGKLPKA---TSSAKVTGP-CGETMEIHLEIQEDEIV-DGSFVTDGCGPSKACG 85 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADY 121 L G++LD+A I+ I + +E LP HC+ LA ++ AI ++ Sbjct: 86 FLAVMLAIGRNLDDAAMIEGDTILDMIEDLPEDHHHCAYLAAATLQTAIHNH 137 >UniRef50_B0RG88 NifU-like protein n=2 Tax=Clavibacter michiganensis RepID=B0RG88_CLAMS Length = 147 Score = 88.4 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 25/138 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++DH P G + P CGD + L +++ D G + + + +G Sbjct: 12 YQELILDHSRTPEGQG---DPTGWPLHAHQVNPTCGDEITLGVRIED-GRVAEIAWTGHG 67 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA----------------IKNTDIAEELELPPV---- 102 C + AS+S++ + G LD A A + + + + L V Sbjct: 68 CAISQASASMLVGVLDGVDLDTAHARAAAFREVMRSRGASHLDPEEFGDAVALDGVSRYM 127 Query: 103 -KIHCSILAEDAIKAAIA 119 ++ C++L ++ A+ Sbjct: 128 GRVKCAMLPWTTLEEALR 145 >UniRef50_B7GS89 SUF system FeS assembly protein, NifU family n=7 Tax=Bifidobacteriaceae RepID=B7GS89_BIFLI Length = 184 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 46/165 (27%) Query: 2 AYSEKVIDHYENPR-------NVGSFDNNDE-------------NVGSGMVGAPACGDVM 41 Y E +++ ++P N + D G P CGD Sbjct: 14 MYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPGESHQFNPTCGDEA 73 Query: 42 KLQIKVNDEG--IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTD------- 92 + ++V+D+ I+ + +GC + AS S++ + V GK++DEA ++ T Sbjct: 74 TIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAMDLEQTFHKLMESR 133 Query: 93 -----------------IAEELELPPVKIHCSILAEDAIKAAIAD 120 + + + P++I C++L + +K +IA Sbjct: 134 GAGLDDENLEEKLGDAVVFQGVSKYPMRIKCALLGWEGLKDSIAK 178 >UniRef50_D2MQI8 SUF system FeS assembly protein, NifU family n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI8_9FIRM Length = 152 Score = 87.3 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 21/135 (15%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 E ++DHY+ P + S + +C D + ++ KV + GII+D F+ C Sbjct: 14 RELILDHYQYPHHHKLIKKA--PYQSVHKASDSCIDDITVEAKV-EAGIIQDINFEGVAC 70 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPP----------------VKIH 105 + AS+S++ + + GK+ +EA+ + + E P +I Sbjct: 71 AISTASTSMMADLLIGKTKEEAKVLIENFLHMVHEEAYDPDSLEEAIALKNVYRQANRIK 130 Query: 106 CSILAEDAIKAAIAD 120 C+ + A++ + Sbjct: 131 CATIGWSALQEILEK 145 >UniRef50_D2RA02 SUF system FeS assembly protein, NifU family n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA02_GARVA Length = 233 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 30/133 (22%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKV------NDEGIIEDARFKTYGCGSAIASSSLVTE 75 + + +G P CGD + +++++ ++ I+ ++ +GC + AS S++ + Sbjct: 100 DENSALGQSHQFNPTCGDEVTMRVELSRSANNDETPIVSSIKWDGHGCSISQASLSMMVD 159 Query: 76 WVKGKSLDEAQAIK------------------------NTDIAEELELPPVKIHCSILAE 111 V+GKS+DEA + + + + + P++I C++LA Sbjct: 160 LVEGKSVDEALQLDALFHKLMESRGEGLQSEEDEDALEDAMVLQGVSRYPMRIKCALLAW 219 Query: 112 DAIKAAIADYKSK 124 + +K +IA + Sbjct: 220 EGLKDSIAKAMKE 232 >UniRef50_C7ML19 SUF system FeS assembly protein, NifU family n=6 Tax=Bacteria RepID=C7ML19_CRYCD Length = 151 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ +++H +P D+ S P+CGD + L +K+ + G++E+A F G Sbjct: 7 YTAALMEHNAHPDYKYQMDDP---TMSHQGINPSCGDDITLSLKI-ENGVVEEAAFVGSG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAI------------KNTDIAEELE--------LPPV 102 C + AS+ ++ + + ++++ A+ + + ++ E E L P Sbjct: 63 CAVSQASADIMADLITDETVENARHLCDIFLRMIVGNATDAELEELGEAAQLKSIALMPA 122 Query: 103 KIHCSILAEDA 113 ++ C+ L Sbjct: 123 RVKCAELGWRT 133 >UniRef50_Q0BSI3 IscU protein n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BSI3_GRABC Length = 163 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 32/146 (21%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKV----NDEGIIEDARF 58 Y + ++ H + P + S P CGD + + I + ++E F Sbjct: 17 YHDLILRHGKKPLHGQRLP---VFSLSREADNPLCGDQVTVFIATGMPDDGNEVVEAVGF 73 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEA-------------------------QAIKNTDI 93 + GC +IAS+ L+ E V+G + +A A+ Sbjct: 74 EAKGCAISIASADLMAETVRGLNRAQAHDVMKGFHALVRSGQVPDLECPVCHAALSRLQP 133 Query: 94 AEELELPPVKIHCSILAEDAIKAAIA 119 + P +I C+ L A+ AA+ Sbjct: 134 LGGVHEYPSRIKCATLPWRALSAALE 159 >UniRef50_C8WNS3 Nitrogen-fixing NifU domain protein n=3 Tax=Coriobacteriaceae RepID=C8WNS3_EGGLE Length = 166 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDV-MKLQIKVN-DEGIIEDARFK 59 YS+ ++ N RN G+ + + MVG G+V ++L ++ D A FK Sbjct: 3 GYSDTLLSVVANFRNGGAPEGFNAQ---SMVGKSKRGEVALRLFAVIDHDTRTFVRAGFK 59 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV-KIHCSILAEDAIKAAI 118 T GC + +S+V ++G + DEA AI D+ L+ PV K++ A +A++A I Sbjct: 60 TRGCLAVTGCASVVCSMLEGCTFDEALAITTDDVKTALDGVPVDKVYTIHFAIEAVRALI 119 Query: 119 ADYKSKREA 127 DY ++ A Sbjct: 120 GDYLVRQGA 128 >UniRef50_B2S3K5 Nitrogen fixation protein n=4 Tax=Treponema RepID=B2S3K5_TREPS Length = 147 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 25/131 (19%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++++ + + VG P+CGD + L IK + I D F G Sbjct: 7 YRQVLLEYARKQEHRRVLEGP---VGIERGHNPSCGDDLTLLIK-REGDRIADVAFLGTG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA---------------------IKNTDIAEELELPP 101 C + AS++++ E +KG S+ +AQ +++ I P Sbjct: 63 CAVSTASTNILIELIKGASVAQAQKTVALFFHMMAQQCLTDQERAHLQDACILACFASMP 122 Query: 102 VKIHCSILAED 112 +I C+ L+ Sbjct: 123 ARIKCATLSWH 133 >UniRef50_A8S193 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S193_9CLOT Length = 135 Score = 85.7 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY--GCGSAIASSSLVTEWVKG 79 +G+G P+C DV+ + E +I + C + A + V+G Sbjct: 18 KPQTCMGTGACQDPSCRDVLTYYFSADRE-LITSISYTITETSCFPSKACAETAAALVRG 76 Query: 80 KSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIADYKSKRE 126 + + EA I ++ IA L P +HC+++AE A+K A+ DY KR+ Sbjct: 77 RPVLEAYTIDSSAIATALGGLEPEYMHCAMMAELALKRAVLDYAGKRK 124 >UniRef50_A6WDQ7 SUF system FeS assembly protein, NifU family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDQ7_KINRD Length = 146 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 25/137 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +I+H + P G P CGD + L++ V E + D + G Sbjct: 7 YQQLIIEHSKRPHGEGL---RSPFGAEAHHVNPTCGDEITLRVAVAGE-TVGDVSYDAVG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ---------------------AIKNTDIAEELELPP 101 C + AS+S++ + V G+ + E + + + P Sbjct: 63 CSISRASASVLHDLVVGRPVGEVAVVREAVQAMLTSRGADPGDEDVLGDAVALAGVARYP 122 Query: 102 VKIHCSILAEDAIKAAI 118 ++ C++L+ A+ A+ Sbjct: 123 ARVKCALLSWSALADAL 139 >UniRef50_B1VAA5 NifU homolog n=3 Tax=Candidatus Phytoplasma RepID=B1VAA5_PHYAS Length = 147 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 24/140 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND---EGIIEDARFK 59 Y + ++ HY+ P+N G + D++ S +CGD + LQIK IED ++K Sbjct: 8 YRDIIMKHYQEPQNWGL--SQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIEDIKYK 65 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQA--------IKNTDIAE-----------ELELP 100 T C AS+SL++ ++K +++ I N D+ E Sbjct: 66 TQSCAICRASASLMSLYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFKHFCQF 125 Query: 101 PVKIHCSILAEDAIKAAIAD 120 + C L A++ I Sbjct: 126 QGRRVCVALPWQALEKIIQK 145 >UniRef50_Q14L11 Putative iron-sulfur cluster assembly protein n=1 Tax=Spiroplasma citri RepID=Q14L11_SPICI Length = 150 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 21/138 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M + ++DHY P+ G V S + +C D + L++ + II ARF Sbjct: 9 MFLRQIIMDHYSEPQYKGLTKKPT--VYSIHQASESCIDDIYLELMIERNKIIS-ARFDG 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP------------------PV 102 GC + ASS ++ + ++GK++ + AI +A + P P Sbjct: 66 VGCAISTASSDIMAQELEGKAIKDGLAIIENYLAMVFDQPYDENKLNNLIAFINIAKQPN 125 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ + + + D Sbjct: 126 RIKCATIGVTGFQTLLLD 143 >UniRef50_UPI000050F718 SUF system FeS assembly protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F718 Length = 155 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 24/144 (16%) Query: 3 YSEKVIDHYENPRNVGSF--DNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 Y + ++DH D GS P CGD ++L+ ++ +G I R+ Sbjct: 9 YQQVILDHSRERIGNADLLGDMAAGPHGSSHQINPTCGDEIELETELGSDGSIV-VRWTG 67 Query: 61 YGCGSAIASSSLVTEWVKGKSLD-----EAQ----------------AIKNTDIAEELEL 99 GC ++AS+S+++E + +L+ EA+ + + + Sbjct: 68 DGCSISMASASVLSELAEENTLEGMLDVEAKFHELMHSRGTMAGDEEILGDAAAFSGVSK 127 Query: 100 PPVKIHCSILAEDAIKAAIADYKS 123 P +I C++L+ A K A+ ++ Sbjct: 128 FPARIKCALLSWVAFKDALNQAQT 151 >UniRef50_Q048H8 Fe-S cluster formation protein, NifU-like n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q048H8_LACDB Length = 146 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 25/138 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++D+ + + + + V + +CGD + LQ+KV EG IE G Sbjct: 10 YQAVLLDYAASQKYRQPLASPTKAVS---LVNESCGDRLTLQVKVK-EGKIEQVACLAEG 65 Query: 63 CGSAIASSSLVT-------------------EWVKGKSL--DEAQAIKNTDIAEELELPP 101 C + AS++++ ++GK + +E + + + + + + P Sbjct: 66 CTISQASAAIMAGLVDQAPLEKAAGLLPIFWRMLEGKEISQEEEKELGDAALLQGVSRFP 125 Query: 102 VKIHCSILAEDAIKAAIA 119 ++ C+ LA + AI Sbjct: 126 ARVKCAGLAWQGLSEAIE 143 >UniRef50_C2BX07 Possible iron-sulfur (Fe-S) cluster formation protein IscU n=3 Tax=Mobiluncus RepID=C2BX07_9ACTO Length = 180 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 27/144 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++ + G+ S P CGD + LQ+KV D G + + + +G Sbjct: 8 YQQLILEQSKARHGAGTLPG---WAASSHQVNPTCGDEVTLQVKVTD-GKLRELVWDGHG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIK--------------NTDI---------AEELEL 99 C + AS S++ E V+G+ L+ ++ + D+ E + Sbjct: 64 CSISQASLSMMWELVQGQDLEAVHGLEQDFNEMMHSRGRGVDEDLLDRLGDASSLEGVSR 123 Query: 100 PPVKIHCSILAEDAIKAAIADYKS 123 ++ C++L A+K A+A + Sbjct: 124 YVNRVKCALLGWMALKDALAQAEV 147 >UniRef50_Q1AXD4 Nitrogen-fixing NifU-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXD4_RUBXD Length = 134 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 55/127 (43%), Gaps = 7/127 (5%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 ++++H NPR+ G + D ++ G+P CG + + +K + +G I F G Sbjct: 9 RLVEHARNPRHRGVIRDADVSMPG---GSPECGGSVVVYLKADGDGGIAGLSFTGQGDTI 65 Query: 66 AIASSSLVTE--WVKGKSLDEAQAIKNTDIAEEL--ELPPVKIHCSILAEDAIKAAIADY 121 + ++ L E + L++ + EE+ ++ + + L IK A+ Y Sbjct: 66 SQGATDLAIEKILAERMGLEDVLGLSYDRFIEEVGRDVVGSRTRNATLGLSTIKNAVRKY 125 Query: 122 KSKREAK 128 + R + Sbjct: 126 RRDRGVR 132 >UniRef50_B1AJ94 SUF system FeS assembly protein, NifU family n=15 Tax=Ureaplasma RepID=B1AJ94_UREP2 Length = 155 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 19/141 (13%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++ HYE+P+N F ++ N S CGD + + +K+N + II D F GC Sbjct: 13 RKIIMQHYEHPKNKVCFVQDEINYLSYHNTTEGCGDDITVYVKLNHQKII-DVVFLGTGC 71 Query: 64 GSAIASSSLVTEWVKGKSLD-------------EAQAIKNTDIAEELELPPV-----KIH 105 +I+S+ ++ E VK L+ E + E + V +I Sbjct: 72 AISISSTDIICELVKNLDLNNALLLINNYLNMIEGLDYNKDIMQELIAFYNVKKQMNRIR 131 Query: 106 CSILAEDAIKAAIADYKSKRE 126 C+ + A+K + + K + Sbjct: 132 CARIGASALKMCLKQFTDKHK 152 >UniRef50_C7JBP3 NifU family SUF system FeS assembly protein n=8 Tax=Acetobacter pasteurianus RepID=C7JBP3_ACEP3 Length = 150 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 26/139 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +++ P+ G + G P CGD ++ I + D I+ R T G Sbjct: 12 YDRVIVERARAPQYAGKLEAPSVQ---GEGKNPMCGDKTRVDIAL-DATHIQSVRHTTRG 67 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT----------------------DIAEELELP 100 C A++ L+ + V G + +A ++ ++ + L Sbjct: 68 CAICAAAADLMAQQVSGLDVAQAVSLSGRFSAMLVGETSPAATADTSLGPLEVFQPLRSH 127 Query: 101 PVKIHCSILAEDAIKAAIA 119 +I C+ L A+K A++ Sbjct: 128 KARIRCAELPWIALKEALS 146 >UniRef50_C4XEA9 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA9_MYCFE Length = 145 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 60/138 (43%), Gaps = 27/138 (19%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + +++HY PR+ + + +C D ++ ++ + + IED +F GC Sbjct: 12 RQIIMEHYLKPRH-----KSSSLKNKIIKHGESCADYLECELNIKNNQ-IEDIKFDGQGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDE---------------------AQAIKNTDIAEELELPPV 102 IAS+ L+ + +KGK +DE + ++ I + ++ Sbjct: 66 AFFIASTDLLIDLLKGKKIDESICLIELYEKFILDEKLNENDIEKLETLAIFDNVKTQFN 125 Query: 103 KIHCSILAEDAIKAAIAD 120 +++C+++ AIK + D Sbjct: 126 RVNCALMLARAIKEKLQD 143 >UniRef50_Q0YR11 Nitrogen-fixing NifU-like:BFD-like (2Fe-2S)-binding region n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR11_9CHLB Length = 161 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAA 117 +TYGC SAIAS+S+++E VKG++LD+A I ++A E LP KIHCS+L + A++AA Sbjct: 24 ETYGCASAIASTSVLSEMVKGRTLDQAFNISPKEVALELGGLPDNKIHCSVLGDKALRAA 83 Query: 118 IADYKSK 124 I DY ++ Sbjct: 84 INDYYTR 90 >UniRef50_C0D022 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D022_9CLOT Length = 136 Score = 78.0 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 7/128 (5%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY-- 61 EK+I + E N+G + +G G P CGDV+ + + E II + RF Sbjct: 3 REKIILYSEKTENLGE---PELFLGRGEAREPGCGDVLAMFVDTRRE-IITECRFTITES 58 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 C A ++ E GK + EA I ++E L IHC+ +AE A+K + D Sbjct: 59 ACPPLKACAARAAELALGKPVMEAYLISADALSEFFGGLEQESIHCAQMAEIALKRTLKD 118 Query: 121 YKSKREAK 128 Y +R + Sbjct: 119 YAVRRADR 126 >UniRef50_B3R0D5 NifU-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0D5_PHYMT Length = 146 Score = 78.0 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 23/142 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDV-MKLQIKVNDEGIIEDARFKTY 61 Y ++ +Y +N +D + P CGD + LQIKV II D R++ Sbjct: 8 YRNLILKYYHKKQNKILL--SDSSYFCLKHENPFCGDDYIFLQIKVKSNMII-DFRYEIK 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-------------------AEELELPPV 102 GC I+S++ ++ +K K + E I N I + L Sbjct: 65 GCVICISSANFMSNELKNKHISEVIKISNNFINMLKGKKFNLDNINSDFQLFQFLVNIKS 124 Query: 103 KIHCSILAEDAIKAAIADYKSK 124 +++C+IL+ +A+ + + + K Sbjct: 125 RVNCAILSWEALLKLLKNVEFK 146 >UniRef50_D2LAE9 Nitrogen-fixing NifU domain protein n=2 Tax=Desulfovibrio RepID=D2LAE9_9DELT Length = 120 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 29 SGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAI 88 GM ACG +K+Q+ +ND+ +I +A CG + + + E V+G S+ +AQA+ Sbjct: 23 EGMSECSACGRAVKMQLLINDD-VIVEAGGSVESCGYSRECMAALIETVRGMSVYDAQAV 81 Query: 89 KNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREA 127 D + K+ C A++ A+ +Y+ + A Sbjct: 82 STEDFQPRMTRVIEKLGCDNWCVAALRIALRNYRIREAA 120 >UniRef50_B5JQP0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQP0_9BACT Length = 143 Score = 76.1 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 30/137 (21%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++ H + P N + + + P CGD + + K ND+G + F Sbjct: 9 YKQTLLAHSKQPLNNHALPDA----PHATLRNPLCGDEITVYQKTNDDGS-KQITFTAQA 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIK-------------NTDIAEELELP--------- 100 C +AS+S++T+ + EAQ NT + LP Sbjct: 64 CTICLASASMMTQHLATLPTPEAQTFADSLVSIFQNAKKPNTQTPDLETLPGDLASLTGV 123 Query: 101 ---PVKIHCSILAEDAI 114 P +I C+ L +A Sbjct: 124 LAFPSRIRCATLPFEAY 140 >UniRef50_Q7NBI8 Putative uncharacterized protein n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBI8_MYCGA Length = 144 Score = 76.1 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 29/149 (19%) Query: 1 MAYS------EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIE 54 M YS + +ID+Y+NP+N +D N + +C D L + + D+ ++ Sbjct: 1 MNYSNALIRRQIIIDYYQNPKNFIKEPISDPNYKVIKTKSDSCADQFDLYLLIKDDLLV- 59 Query: 55 DARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEE 96 D +F GC + + +++++ K LDE + + + DI Sbjct: 60 DLKFSGSGCIISQTTFDFLSKYLINKKLDEVKKLLSAYLEFIFKDVKNPLLAEEFDIFSS 119 Query: 97 LELPPVKIHCSILAEDAIKAAIADYKSKR 125 + + +I C+ + A+ +Y +K Sbjct: 120 VHMQSNRIICATINAKAL----NEYLTKE 144 >UniRef50_C0QB63 Putative nitrogen fixation protein NifU (NifU-like protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QB63_DESAH Length = 151 Score = 76.1 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 15/121 (12%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MA+ + ENP G CGD ++ + + G++ + Sbjct: 20 MAFKTDFQERVENPDGHGR-------------RTGECGDTVEFFL-MATNGVLTSITYDV 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIA 119 GC + A ++ V GK++D A I + D++ L+ LP HC+ LA A A+ Sbjct: 66 DGCKNTNACANTVVHLATGKTVDAAWNITHEDVSAFLKTLPAHDTHCAELAVGAFYLALK 125 Query: 120 D 120 D Sbjct: 126 D 126 >UniRef50_Q98R36 NITROGEN FIXATION PROTEIN NIFU n=1 Tax=Mycoplasma pulmonis RepID=Q98R36_MYCPU Length = 144 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 23/137 (16%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++ HYE P N D N + + + + +C D + +++++ D+ I+++ F GC Sbjct: 10 RKLIMKHYEFPIN---LDKNLDEKTANQIYSSSCADSISIKLEI-DKNIVKNISFNGSGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAI-------------------KNTDIAEELELPPVKI 104 I+S+ L+ E +K K++DE I N I E ++ + Sbjct: 66 AIFISSTDLLLEQIKNKNIDEVLDIIENYKNMINAKENVKDDKLGNLVIFENVKKHLNRA 125 Query: 105 HCSILAEDAIKAAIADY 121 C+ L D I+ + + Sbjct: 126 KCASLTADFIEEKLKKH 142 >UniRef50_Q0A8C0 Nitrogen-fixing NifU domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8C0_ALHEH Length = 144 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 21/121 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++DHY +PR G ++ G CGD ++L + ++ + + F G Sbjct: 5 YRDIILDHYRHPRRFGPVEH---FPLRGEARNALCGDELQLGLALSGDR-VSAMGFHGRG 60 Query: 63 CGSAIASSSLVTEWVKGKS----------LDEAQAIKNTDIAEELELP-------PVKIH 105 C +A++SL E + G S LD A + + P P + Sbjct: 61 CAVCMAAASLCCERLPGTSAARLALWPAQLDAALKRNDDGLLPAPLEPLTLLRAYPARHR 120 Query: 106 C 106 C Sbjct: 121 C 121 >UniRef50_A5G0T1 SUF system FeS assembly protein, NifU family n=2 Tax=Acetobacteraceae RepID=A5G0T1_ACICJ Length = 151 Score = 74.9 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 23/137 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +++ P + G D P CGD + L++ G I + +T G Sbjct: 11 YQRLIMERARAPLHAGRPARFD---AEAEGDNPMCGDRVHLRLSCAG-GAIGEVWHETRG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELPP-----------------VK 103 C +AS+ L+ + V G+S A+ + + + +P + Sbjct: 67 CAICVASADLMADAVAGRSRAAAEELADAFEAMVATGAVPDREDFSELRALSGVHEYRSR 126 Query: 104 IHCSILAEDAIKAAIAD 120 C+ L A++AA+ Sbjct: 127 HRCATLPWQALRAALTK 143 >UniRef50_C6N0B9 NifU family iron binding protein n=2 Tax=Legionella RepID=C6N0B9_9GAMM Length = 131 Score = 74.5 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M Y+ V D++ +PR+VG + N + V G ++ ++ + +I+ FKT Sbjct: 1 MIYNNTVCDYFFSPRHVGIIELNHDLVVVFKNKQKGQG-TIEFYMQCGQDRLIQKVCFKT 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 G IA + +KG++LD+ I + +EL++P + ++ K ++ Sbjct: 60 NGNPYLIAGLEWLCRQLKGRALDKVPKIDYQLLIKELDIPVTQYPLALRVVHVFKESLIL 119 Query: 121 YKSK 124 ++ Sbjct: 120 MNNR 123 >UniRef50_A0JUB0 SUF system FeS assembly protein, NifU family n=6 Tax=Micrococcaceae RepID=A0JUB0_ARTS2 Length = 161 Score = 73.8 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 36/153 (23%) Query: 2 AYSEKVIDHYENPRNVGSF--DNNDENVGSGMVG-----APACGDVMKLQIKVNDEG--- 51 Y + +++H + R+ D E VG P CGD + L++++ G Sbjct: 7 MYQQLILEHAKA-RSGADLTADEATETPHQAGVGQCHQLNPVCGDEITLRLELEAAGNPP 65 Query: 52 IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQA---------------------IKN 90 ++ + GC ++AS+S+++E +G S DE + + Sbjct: 66 SVKGIHWHGDGCAISMASASILSELSEGASPDELSEMIDHFRELMRSRGRLEPDEEILGD 125 Query: 91 TDIAEELELPPVKIHCSILAE----DAIKAAIA 119 + P ++ C++LA DA++ A+A Sbjct: 126 AAALAGVAKYPARVKCAMLAWVAAEDALRQAVA 158 >UniRef50_Q8EV25 Nitrogen fixation protein NifU n=1 Tax=Mycoplasma penetrans RepID=Q8EV25_MYCPE Length = 148 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 22/138 (15%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGA---PACGDVMKLQIKVNDEGIIEDARFKT 60 + ++DHYE P N S D + + +C D + L +K + GII D +F Sbjct: 12 RKLILDHYEIPDNKISEDEASKLNDIYVSFNNRTASCIDNLTLYLK-EENGIIVDVKFSG 70 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNT------------------DIAEELELPPV 102 GC + AS+ + +K K +++ + + + + Sbjct: 71 IGCAISTASTDIFCTMIKNKKVNDISDLIRKYFNMIDGDSFNEEELQYLSVFKNISKQLN 130 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ + AI+ + Sbjct: 131 RIKCAKVGIVAIEQLVTK 148 >UniRef50_Q6MEW2 Putative iron-sulfur cluster assembly protein nifU n=2 Tax=Parachlamydiaceae RepID=Q6MEW2_PARUW Length = 263 Score = 72.2 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 6/93 (6%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN-----VGSGMVGAPACGDVMKLQIKVN-DEGIIEDA 56 YS+K++ + PR +G F+ + G G A G+ + L V+ D+GII DA Sbjct: 15 YSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIK 89 +F+ YG + I ++ + E V GK+ D+A+ I Sbjct: 75 KFQAYGQSALIGAAEVACELVIGKNYDQAKRIS 107 >UniRef50_C5BVY5 SUF system FeS assembly protein, NifU family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVY5_BEUC1 Length = 191 Score = 72.2 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 65/187 (34%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-------------- 48 Y + ++DH G + G P CGD ++L++ ++ Sbjct: 8 YQQVILDHARERHAYGLREGA---AGESFQVNPTCGDEVRLRVHIDFGSAGDGGIGGADS 64 Query: 49 -------------------------DEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLD 83 I ++ +GC + AS S++++ V G + Sbjct: 65 FGGAGGGDVGSGVLTGAGASGREVSARPRISGVSWEGHGCSISQASISVMSDLVTGTDVL 124 Query: 84 EA-----------------------QAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 A + + + + P ++ C++L A++ A+A Sbjct: 125 TADAFAESFRALMHHRGEPLGDSRDEELGDAAAFVGVAKYPARVKCALLGWMALRDALAH 184 Query: 121 YKSKREA 127 K E+ Sbjct: 185 ALVKEES 191 >UniRef50_C4XLN0 Nitrogen-fixing NifU-like N-terminal domain protein n=2 Tax=Desulfovibrio RepID=C4XLN0_DESMR Length = 164 Score = 72.2 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 6/121 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + EK + + N + G V +CGD + + + V+ E + A T G Sbjct: 29 FGEKGFAVWRDAPNRARLEAP---TTIGTVKG-SCGDTITINLLVSGER-VTAADCDTDG 83 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTD-IAEELELPPVKIHCSILAEDAIKAAIADY 121 C S++ ++ GK+LDEA I +A P HC+ LA A++ A+ + Sbjct: 84 CASSLIAAVTAASLAVGKTLDEAVDIDEAAVVAAVGRFPDDDRHCAYLAAAAVREAVHRW 143 Query: 122 K 122 Sbjct: 144 M 144 >UniRef50_A6GEC3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEC3_9DELT Length = 691 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 24/136 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E+++ H +P ++ P CGD +++ +V D G Sbjct: 5 YHERLLAHAHDPCCGPVPEDPTVE---ACATNPLCGDEVRVAARVED-GRFAALGCAVEA 60 Query: 63 CGSAIASSSLVTEWVKGKSL--------------------DEAQAIKNTDIAEELELPPV 102 C +AS+S+++ ++ + + D A A + D+ L P Sbjct: 61 CAVCVASASIMSALLREQPVSTLDEGLRALEAVVAGDAQLDSALAESDLDVFAALADYPS 120 Query: 103 KIHCSILAEDAIKAAI 118 + C+ L A++ A+ Sbjct: 121 RRSCAFLPWRALEEAL 136 >UniRef50_C7MLZ4 NifU-like protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLZ4_CRYCD Length = 175 Score = 70.7 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDV-MKLQIKVNDEG-IIEDARFK 59 YS++++ N RN G + + GM G G+V ++ ++ I+ F+ Sbjct: 12 GYSDRLLTVVANFRNSGIPEGCNAR---GMAGKSKHGEVACQIFAVIDPATYTIDRIGFR 68 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAI 118 + GC + A +S + G ++ A I D+ +P K A +A+ +AI Sbjct: 69 SRGCLAMTACASQLCVMAHGLPIERALTITVADLKRTLDGVPTEKQDTPAFAIEALHSAI 128 Query: 119 ADYKSKREA 127 D+ ++ Sbjct: 129 GDFLLEQGG 137 >UniRef50_UPI00017430E0 nitrogen fixation protein (nifU) n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017430E0 Length = 96 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++++ +N + P CGD + L+IK ++ II DA F G Sbjct: 7 YQQTILEYSRRRELNREIENPTF---AERGHNPNCGDDLTLEIKTDENDIIIDAAFIGSG 63 Query: 63 CGSAIASSSLVTEWVKGK 80 C + AS +++ + K K Sbjct: 64 CAISTASMAMLIDLDKRK 81 >UniRef50_Q6KIL2 Aminotransferase protein U homolog n=1 Tax=Mycoplasma mobile RepID=Q6KIL2_MYCMO Length = 142 Score = 66.1 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 25/141 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 ++ ++ HY +P N + + N S + +C D + L +K+ ++ ++ DA+F+ GC Sbjct: 9 TDIIMKHYSSPIN--KVEEIETNSKSIYRHSASCVDEINLNLKIENDFLV-DAKFQGVGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNT------------------DIAEELELPPVKIH 105 ++S+ + E +K K L + I N I E +++ ++ Sbjct: 66 AVFLSSADIFLEEIKNKPLSKVNEIANAYFDLINKKESNNLKIGKLAIFENVKIHLNRLE 125 Query: 106 CSILAEDAIKAAIADYKSKRE 126 C+ L I A D+ K + Sbjct: 126 CASL----IYQAYNDFLEKHK 142 >UniRef50_C6XNB0 Nitrogen-fixing NifU domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNB0_HIRBI Length = 148 Score = 66.1 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 22/144 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +V++ N N N D GS + CG V+ + ++ EG I D F+ Sbjct: 6 YHNRVLELAANIPNAERLANPD---GSARKVSRVCGSVITADVNLDSEGKITDIGFEPEA 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELPPV----------------KI 104 C S S+++ KGK+L + AI++ + +E PP + Sbjct: 63 CVLGQTSCSVLSAHAKGKNLADIVAIRDAFKAMLKEGAPPPEGDFWELRHLEGVRDYPQR 122 Query: 105 HCSI-LAEDAIKAAIADYKSKREA 127 H S LA +A+ AA+ K+ A Sbjct: 123 HTSTLLAFEALIAAMEAANEKQSA 146 >UniRef50_Q134L6 NifU-like protein n=68 Tax=Alphaproteobacteria RepID=Q134L6_RHOPS Length = 173 Score = 63.8 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 12/128 (9%) Query: 3 YSEKVIDHYEN-PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y++++I+ N PR +G D S + CG +K+ +K++ + ++ D + Sbjct: 31 YNKRIIELAGNIPR-IGRLPAPD---ASATAHSKLCGSTVKIDLKMDGD-VVSDFAHEVK 85 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTD--IAEELELPPVKIHCSILAEDAIKAAIA 119 C ASSS++ V G + E +A+++T + +E PP AE A+ + Sbjct: 86 ACALGQASSSIMASHVVGSTSSELRALRDTVRKMLKENGAPPD----GKWAEIAMLEPVR 141 Query: 120 DYKSKREA 127 DYK++ + Sbjct: 142 DYKARHAS 149 >UniRef50_Q4A687 Nitrogen fixation protein NifU n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A687_MYCS5 Length = 147 Score = 63.4 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++DHY NPR+ FD N + + C D + + + D+ + +D + T GC Sbjct: 14 RKIIMDHYVNPRH---FDKN--ILEKNVFYNNTCSDKLVVNATIEDKKL-KDIKHYTQGC 67 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKN 90 +S+S+ + ++ K+L EA I N Sbjct: 68 LICASSASIFIDQIQNKNLSEAFEINN 94 >UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3185B Length = 519 Score = 63.4 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGCGSAIASSSLVTEWVKGK 80 E +G+ G CGDV++L + ++ G + + ++ CG+ +A+ S V+E V Sbjct: 26 RAPEGGATGVAGTRLCGDVVRLTLALDPSGQRVAEVGWEAEACGATLAACSAVSELVADA 85 Query: 81 SLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAI 114 L + I +A+ L K H + L DA+ Sbjct: 86 PLLDVARIGAHQVADALGGLSAGKFHAAELVADAL 120 >UniRef50_B2IBC3 Nitrogen-fixing NifU domain protein n=23 Tax=Alphaproteobacteria RepID=B2IBC3_BEII9 Length = 159 Score = 61.8 bits (149), Expect = 7e-09, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 12/128 (9%) Query: 3 YSEKVIDHYEN-PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+++++D N PR +G + D S + CG + + +K+ D G + D Sbjct: 16 YNQQILDLAGNIPR-LGRLEKPD---ASAKAHSKLCGSTIIVDLKMQD-GKVVDFAHDVK 70 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIA 119 C + A++S++ V G + E +A++ T + + PP A+ A+ + Sbjct: 71 ACALSQAAASIMARHVIGSTGPELRALRETMRAMLKANGAPPE----GRWADFAVLEPVR 126 Query: 120 DYKSKREA 127 D+K++ + Sbjct: 127 DFKARHTS 134 >UniRef50_Q3KKX4 NifU n=8 Tax=Chlamydia RepID=Q3KKX4_CHLTA Length = 260 Score = 61.4 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 12/124 (9%) Query: 8 IDHYENPRNVGSF----DNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTYG 62 + + P++ G+ ++ + + G G G+ + V+ GII +A+F+ +G Sbjct: 19 LRFFFQPKHGGALSHDQEDEEIQLVIGKQGHLLMGNTLLFYWLVDKTNGIIREAKFQYFG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP-------PVKIHCSILAEDAIK 115 + + V GK+ EA I D+ +E+ L DA+ Sbjct: 79 HPYLLVLAEATCSLVIGKTFAEAYKITINDLDQEVRGHAHPSIFLEDLSPLYHLVIDALD 138 Query: 116 AAIA 119 AI Sbjct: 139 IAIE 142 >UniRef50_B6BJX3 Putative NifU-like N terminal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJX3_9PROT Length = 159 Score = 61.4 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 4/120 (3%) Query: 8 IDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAI 67 ++H +P+N G +N + VG G+ + + ++ E II+D +F T GC + Sbjct: 19 LEHLMDPKNYGKLENAN-CVGVGLDEKTK--EYVIFYTLLDGE-IIKDVKFATNGCQDTV 74 Query: 68 ASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREA 127 S+ T+ +K L+ A + + P + C+ + A A++ ++++ + Sbjct: 75 VIGSMFTQMIKSNDLEYANGAIQKMNEKLGSMTPQQKVCADIVFTAFIASMKNFENIQNG 134 >UniRef50_B0RHZ4 Putative uncharacterized protein n=2 Tax=Clavibacter michiganensis RepID=B0RHZ4_CLAMS Length = 177 Score = 61.1 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 36/134 (26%) Query: 21 DNNDENVGSGMVGAPACGDVMKLQI--------------KVNDEGIIEDARFKTYGCGSA 66 + +GS CGDV+ L++ V+ I R+ GC + Sbjct: 44 PSAGVVLGSSEQRNATCGDVVDLRVLAVDPAHPSVDAGAAVDPAEPIA-VRWHGRGCTVS 102 Query: 67 IASSSLVTEWVKGKSLDEAQ---------------------AIKNTDIAEELELPPVKIH 105 AS+S++ E V+G++ EA + + + P++ Sbjct: 103 QASASMLAELVEGRTAAEAAALVVELRALIRSHELLPGAEDRLGDAFALADSGRYPLRGT 162 Query: 106 CSILAEDAIKAAIA 119 C++LA A++ A+A Sbjct: 163 CALLAWHALEEALA 176 >UniRef50_B3PM56 IscU, NifU-like protein involved in Fe-S cluster formation n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM56_MYCA5 Length = 147 Score = 60.3 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 E +++ Y NPR D D N+ + C D +++ + + I++DA++ GC Sbjct: 10 QELIMEAYLNPRYRVE-DLKDSNIIK--ENSLVCVDEIQIALT-WENSILKDAKYLGKGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAI---------------------KNTDIAEELELPPV 102 ++S ++ +K ++L+E + I I E +++ Sbjct: 66 AIFLSSIEIMLAQIKDRTLNEIETILDLYLAMLNGKKLVEEEQEKLGKLIIFENVKVHLN 125 Query: 103 KIHCSILAEDAIKAAIADYKSK 124 ++ C+ + IK + D ++K Sbjct: 126 RLECASIIYRVIKKGLVDARTK 147 >UniRef50_B8EQR5 Nitrogen-fixing NifU domain protein n=2 Tax=Rhizobiales RepID=B8EQR5_METSB Length = 149 Score = 58.0 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 12/128 (9%) Query: 3 YSEKVIDHYEN-PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+ ++++ N PR +G D + + CG + + I V G I D Sbjct: 6 YNSRILELAGNIPR-LGRLAAPD---ATAKAHSRLCGSTVIVDI-VMKNGKIVDFAHDVK 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELPPVKIHCSILAEDAIKAAIA 119 C A++S++ V G + E +A+++ + +E PP AE A+ + Sbjct: 61 ACALGQAAASIMARHVIGATAPEIRALRDRMRAMLKENGAPPD----GKWAEAAVLEPVR 116 Query: 120 DYKSKREA 127 DYK++ + Sbjct: 117 DYKARHAS 124 >UniRef50_Q256A8 NifU-related protein n=7 Tax=Chlamydophila RepID=Q256A8_CHLFF Length = 273 Score = 55.7 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 16/126 (12%) Query: 4 SEKVIDHYENPRNVGSFDNNDENV-----GSGMVGAPACGDVMKLQIKVND-EGIIEDAR 57 S KV+ + G+F D G G G+ + ++ G I DA+ Sbjct: 15 SPKVMKKFHKFYCGGTFSAEDAETKGACLIIGSQGHRLTGNYVIFYWLIDKVNGKIIDAK 74 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVK----------IHCS 107 F+ +G + + V GK+ +A + +I EL P K HC Sbjct: 75 FQYFGHPFLLVLAETACNLVIGKTYAQAYNLTVNNIDTELRSHPNKPALPESSAALYHCI 134 Query: 108 ILAEDA 113 I A D Sbjct: 135 IDAIDT 140 >UniRef50_C6ADY4 Nitrogen-fixing NifU-like protein n=5 Tax=Bartonella RepID=C6ADY4_BARGA Length = 142 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++K++ + + +G +N D + A CG + + +KV + GI+ D + + Sbjct: 6 YNDKILKYAAHIDKIGRLNNPD---ATSRKHAHLCGSTITVDLKV-ENGIVTDFAHEIHA 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV 102 C AS+SL+ + G++ + + ++ + P Sbjct: 62 CVLGQASASLLASHIIGQTTQDLKKLREVIYQMLTQNGPS 101 >UniRef50_A8TRY7 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRY7_9PROT Length = 144 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 10/126 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++++ + R++G ++ S V P CGD + + + + ++ I D K G Sbjct: 6 YQAEILELAKQGRSIGRLESPTV---SARVDNPICGDRITVDLAITEDR-ITDVGAKVQG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIK--AAIAD 120 C A+++++ G +D+ ++++ A + L + A + D Sbjct: 62 CALCQAAAAIIAIESIGTDVDQLTRVRDSVAAYLAGTTAE----AALPWTRLANFAPVRD 117 Query: 121 YKSKRE 126 +S+ + Sbjct: 118 ARSRHD 123 >UniRef50_Q3A7R9 NifU-like protein n=2 Tax=Desulfuromonadales RepID=Q3A7R9_PELCD Length = 335 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFK 59 + Y++ + + R + GM G + ++ V+ +G +I D ++ Sbjct: 2 LLYTDTIRRWATDYRRCRDLTDPHGTGEVGMAHGEE-GTRIAVRFTVHLQGALITDVGYQ 60 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAED 112 +GCG ++A+ + E K+L A AI + + A LPP + +C+ LA + Sbjct: 61 VFGCGYSMAACAAAAELACNKNLPSAMAIDASQVDALLDGLPPERSYCADLAVE 114 >UniRef50_Q6MTA6 NITROGEN FIXATION PROTEIN NIFU n=4 Tax=Mollicutes RepID=Q6MTA6_MYCMS Length = 145 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 22/138 (15%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 E +I H+ NP N + N ++N + + C D + ++I + + II+ +F C Sbjct: 11 REIIIKHFLNPENK-TLTN-NQNAIIKELKSQTCADQLIIEILI-ENKIIKSMKFDGSAC 67 Query: 64 GSAIASSSL------------VTEWVKGK-------SLDEAQAIKNTDIAEELELPPVKI 104 A +S L E +K +L + + + +I Sbjct: 68 AIATSSIDLLINNLLNLDIKKAIELIKNYQNFLLTGTLVNIDQSNELVVMKNIHKQKNRI 127 Query: 105 HCSILAEDAIKAAIADYK 122 C+ LA + + + Y+ Sbjct: 128 LCASLALNDLLEILNSYE 145 >UniRef50_A3UF02 NifU-related protein involved in Fe-S cluster formation n=2 Tax=Hyphomonadaceae RepID=A3UF02_9RHOB Length = 142 Score = 53.0 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 12/128 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ +++ + ++G + D GS + CG + L +KV D G I D + Sbjct: 5 YTNDLLELAADILHIGRLPDPD---GSASRVSRICGSELTLDLKVAD-GRIADLGLEVKA 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT---DIAEELELPPVKIHCSILAEDAIKAAIA 119 C AS+S+ G L+E + + + E P + A A++ A A Sbjct: 61 CALGQASASVFARAALGADLEEIRVTREALRLMLKEGAPAPNGRF----SALKALQPA-A 115 Query: 120 DYKSKREA 127 Y+ + + Sbjct: 116 SYRQRHGS 123 >UniRef50_B4RE93 NifU-like protein involved in Fe-S cluster formation n=23 Tax=Alphaproteobacteria RepID=B4RE93_PHEZH Length = 149 Score = 53.0 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 10/127 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS +++ + G D +V CG + + +KV D G + D Sbjct: 6 YSARLLRLAAEIPHAGRLPAPDASVEKVAK---LCGSRVVVDVKVED-GRVADFAQDVKA 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIAD 120 C A++S++ V G SL E ++ ++ + ++ PP ++ A+ A + D Sbjct: 62 CALGQAAASVLGAQVIGASLSELESARDQFRAMLKDGGPPPE----GRFSDLAMLAPVKD 117 Query: 121 YKSKREA 127 Y ++ + Sbjct: 118 YPARHAS 124 >UniRef50_Q5P5Y4 Possible NifU homolog n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5Y4_AZOSE Length = 137 Score = 53.0 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 21/135 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++++ + G D GS M +P CGD ++++++V D I+ A + G Sbjct: 6 YNQRIKELAAAACGAGRLDAPS---GSAMRDSPVCGDRVRMEVRVADGRIVALAH-EVKG 61 Query: 63 CGSAIASSSLVTEWVKGKSLD--EAQAIKNTDIAEELELP----------PVKIH----- 105 C A++S++ G S EA + E P PV+ H Sbjct: 62 CLLCRAAASVIGLHGVGLSAADSEALRAGVAAMLAGGERPDGWTELAVFEPVRQHRSRHG 121 Query: 106 CSILAEDAIKAAIAD 120 C ++ +A+ A+A+ Sbjct: 122 CVLIPFEALAKAVAE 136 >UniRef50_D0WJI3 Putative type I restriction-modification system, S subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJI3_9ACTN Length = 213 Score = 52.2 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGD-VMKLQIKVNDEG-IIEDARFK 59 YS++ + + G ++ + GM G+ G ++L VN +IE A ++ Sbjct: 42 GYSDEALALVADVAKTGVPEDTN---AIGMAGSAKHGVIAVQLFAHVNPATHVIERAGYR 98 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP-VKIHCSILAEDAIKAAI 118 +GC + IAS W++GK+++EA AI +AE P K + + A++ Sbjct: 99 AHGCLAMIASGCAAAYWMEGKTVEEAAAISAETLAEARGAVPRDKSYTARYGACAVRGMC 158 Query: 119 ADYKSKREA 127 D+ ++ A Sbjct: 159 GDFLIRQGA 167 >UniRef50_P47579 Uncharacterized protein MG337 n=1 Tax=Mycoplasma genitalium RepID=Y337_MYCGE Length = 138 Score = 51.8 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 8/116 (6%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 K+ID Y N + + + + + C D + + + D+ I F GC Sbjct: 6 RTKIIDIYSNLKYKKPLKSFQKILTTSDSDN--CEDFFNIGLNI-DKNKITAIGFDGDGC 62 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 + ++ L + ++ K++++A+ I + IA + + + + +K I Sbjct: 63 IISTIATELSIKAIENKTINQAKKILSDLIATYKD-----KNSANQVVEELKLLIE 113 >UniRef50_Q1V286 NifU-like N terminal domain protein n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V286_PELUB Length = 132 Score = 51.8 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 26/135 (19%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 ++++ N N N + P CGD M++++ V ++ I+D ++ C Sbjct: 4 RILEIASNTANHKIVKN---HTHHSKNKNPLCGDEMEIRLIVKNDK-IKDMGYQCRSCVY 59 Query: 66 AIASSSLVTEWVKGKSLDEAQAI--------------------KNTDIAEELELPPVKIH 105 AS S++++ + +++ + +++ +I + + + Sbjct: 60 CQASVSMLSQKIIDQNISDIKSLIISIEGLFNETDIKIEKKWNDFKEIMNKDNI--SRKE 117 Query: 106 CSILAEDAIKAAIAD 120 C +L I A+ Sbjct: 118 CLLLPFKTISKALKF 132 >UniRef50_D1J7R1 Aminotransferase protein U homolog (Nitrogenfixation protein NifU) n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7R1_MYCHP Length = 149 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 22/139 (15%) Query: 4 SEKVIDHYENPRNVGSFD-NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + D YENP+ D + + + + C D +KL +++ ++ + G Sbjct: 10 QRIIFDAYENPKFKIKNDEDFKKTDKTLFEHSNVCVDDIKLNFLFDEKNTLKKVEYCAKG 69 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT---------------------DIAEELELPP 101 C ++S L+ + + K+ E I N + + + + Sbjct: 70 CSIFLSSVELMIQQILNKNKLEINEILNEYKTMIDTSTISQRGGEILGKLVVYQNVRVHL 129 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C+ + IK A+++ Sbjct: 130 NRLECASIIFRLIKKAVSN 148 >UniRef50_A4WRP9 NifU-like protein n=20 Tax=Rhodobacterales RepID=A4WRP9_RHOS5 Length = 146 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS ++++ + ++G GS +P CG ++ + + ++D G + D Sbjct: 10 YSGRILELAADIPHIGRLAEPQ---GSARRRSPVCGSMVTVDLSLSD-GRVADFAQDVKA 65 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ 86 C AS+S++ + G+S E + Sbjct: 66 CALGQASASIMGRALLGRSRAEIE 89 >UniRef50_Q0FGM6 NifU-related protein involved in Fe-S cluster formation n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FGM6_9RHOB Length = 147 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+++++ N + G+ +P CG +++ I VN EG I D Sbjct: 11 YSKRILEFAGNIPFTTPLE---IYSGTASRRSPMCGSNLQVWINVN-EGKITDFSHDVKT 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQ 86 C ASSS++ E + G +D+ + Sbjct: 67 CALGQASSSIIAEKIIGLGIDQVK 90 >UniRef50_Q30UA2 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30UA2_SULDN Length = 181 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 4 SEKVIDHYENPRNVGSFDNND-ENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 ++ H P N G ++ VG + + IK DE I D F T G Sbjct: 8 QAEIGKHLMQPENYGKLEDASCIGVGIDHSRKS----YVIMYIK-RDETTILDVMFGTNG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT 91 S+ T+ +KG+S++ AQ I +T Sbjct: 63 TQDTTTLGSIFTDMIKGESIESAQEIADT 91 >UniRef50_B1VA18 NifU homolog involved in Fe-S cluster formation n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VA18_PHYAS Length = 99 Score = 49.1 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 19/95 (20%) Query: 41 MKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKG-------------------KS 81 M +Q+K++ I D +++ C +AS+SL++ +VK K+ Sbjct: 1 MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKA 60 Query: 82 LDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKA 116 D+ Q +N + + P K +C +L ++A Sbjct: 61 YDKEQLDENIQSLDIVHQLPNKTNCVLLPWQTLQA 95 >UniRef50_B0S9Z7 NifU related protein associated with Fe-S cluster formation n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9Z7_LEPBA Length = 141 Score = 49.1 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 19/105 (18%) Query: 34 APACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS-------SLVTEWVKG------K 80 P CGD +KL ++ ++ I+ C AS SL++ G K Sbjct: 34 NPLCGDEVKLYYQITEKKTIQIKAVSGDSCSICAASVGFLFKNQSLISYEFIGSYGIERK 93 Query: 81 SLDEAQ------AIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 E ++ ++ + C++L ++ I Sbjct: 94 KFLEGNESSLFGDLEEISFLRIVKTHSSRHRCALLPWQTLEKIIE 138 >UniRef50_UPI0000D53F18 NifU-like N terminal domain n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D53F18 Length = 133 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 ++ N +N P CGD + +++ +N++ I D ++ C Sbjct: 5 ILKIASNTKNFKDIKKY---THYSKSKNPLCGDEIHIKLVINNQK-ITDFGYQGKSCIYC 60 Query: 67 IASSSLVTEWVKG-KSL 82 A++S+++ + K++ Sbjct: 61 QATASILSNKLINFKTI 77 >UniRef50_B0T0Z9 Nitrogen-fixing NifU domain protein n=2 Tax=Alphaproteobacteria RepID=B0T0Z9_CAUSK Length = 153 Score = 48.0 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 12/128 (9%) Query: 3 YSEKVIDHYEN-PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS +++ N PR G D S A CG + + + V D G + D Sbjct: 6 YSARILGLVANMPR-AGRLAAPD---ASSEKTAKLCGSRITVDVTVED-GKVSDFAQDVA 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIA 119 C AS++++ V G L E + ++ + + PP +E A+ + Sbjct: 61 ACALGQASAAILGAQVVGADLSEIELARDALHAMLKSGGPPPE----GRFSELAVLEPVK 116 Query: 120 DYKSKREA 127 DY ++ + Sbjct: 117 DYPARHAS 124 >UniRef50_Q4AAG9 Putative uncharacterized protein n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4AAG9_MYCHJ Length = 142 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 18/110 (16%) Query: 34 APACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEA-------- 85 C D L +++ E IE +F GC IAS L + + K++++ Sbjct: 34 NENCDDRASLDLEIF-EKKIEKIQFCASGCSLLIASCYLFEKILIKKTINQVKILLDKYE 92 Query: 86 QAIKNTDIAEELE---------LPPVKIHCSILAEDAIKAAIADYKSKRE 126 + I +I EL+ P ++ C + +K + +Y+ + Sbjct: 93 KMINFQEIIPELDSLNALVMVKNHPNRLVCVNIPVKLLKNQLGNYEKNQN 142 >UniRef50_D0XJK8 NifU-like protein involved in Fe-S cluster formation n=3 Tax=Caulobacteraceae RepID=D0XJK8_9CAUL Length = 151 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 11/128 (8%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS +++ N + G + G+G A CG + + ++ +G + Sbjct: 6 YSARILTLAANLPHAGRLTAPE---GTGDRTAKLCGSRAIVDVTLDADGRVAGFAQDVKA 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA---EELELPPVKIHCSILAEDAIKAAIA 119 C A++ ++ E V G S E +A ++ +A + P + A+K +A Sbjct: 63 CALGQAAAGVLGEAVIGASDAELRAARDAMLAMLKSGGDGPDGRFE----GLRALKQ-VA 117 Query: 120 DYKSKREA 127 Y ++ + Sbjct: 118 AYPARHAS 125 >UniRef50_A5V259 NifU-like involved in Fe-S cluster formation n=2 Tax=Sphingomonas RepID=A5V259_SPHWW Length = 172 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ +++ + + + V +P CG + + + ++ EG + + Sbjct: 33 YNARILRLATSIPHQARLADAQATVSR---RSPVCGSRVTVDVVMDGEGRVAALGQEVRA 89 Query: 63 CGSAIASSSLVTEWVKGKSLDE---AQAIKNTDIAEELELP----------PVKIHCS 107 C AS++L+ G++ E A+ +A E + P P + H + Sbjct: 90 CALGQASAALMGAHAIGRTPAELAAARDALTAFLAGERDDPGDWPDLDIFLPARPHAA 147 >UniRef50_B6BGH4 Putative NifU-like N terminal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGH4_9PROT Length = 183 Score = 46.4 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 27/144 (18%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 + H P N G ++ D VG G+ A + + +K D I D +F T Sbjct: 13 IAKHMMQPENYGKLEDAD-CVGVGIDNATK--SYVIMYMK-RDSSHILDVKFGTNSATQD 68 Query: 67 IAS-SSLVTEWVKGKSLDEAQAIK---NTDIAEELEL--PP-----------------VK 103 A+ SL+TE +KG+ + ++ D+ E PP Sbjct: 69 AATLGSLLTEMIKGEPIVDSLVTVLGLEQDLQEAYANIQPPKIDTSKPEGEQVEHISTDH 128 Query: 104 IHCSILAEDAIKAAIADYKSKREA 127 + + + +AA+ Y K+E Sbjct: 129 QDSANMVLTSFRAAMRHYDRKQEG 152 >UniRef50_A5IXL2 Nitrogen fixation protein NifU n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXL2_MYCAP Length = 130 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 4/91 (4%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKS 81 D + +CGD ++ + + I++D F GC I+S++L+ +++ + Sbjct: 10 KKDVQNKKIESFSNSCGDYLEAD-YIIENKILKDLHFNGNGCAYFISSANLLCKYLNSTT 68 Query: 82 LDEAQ---AIKNTDIAEELELPPVKIHCSIL 109 +DE+ + +I + K L Sbjct: 69 IDESLYFIDLFEKNITGKPLSDEEKNKLGEL 99 >UniRef50_C7LUF1 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF1_DESBD Length = 124 Score = 44.9 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 38 GDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97 G +++ + V + II D F T G + +S + V K+++EA A+ DI Sbjct: 34 GRFVEIFVAVREGRII-DVGFLTNIPGDGLVCASAYCDEVLQKTVEEAGALCAQDILALF 92 Query: 98 ELP 100 P Sbjct: 93 PSP 95 >UniRef50_C5TE59 NifU-like involved in Fe-S cluster formation n=3 Tax=Zymomonas mobilis RepID=C5TE59_ZYMMO Length = 149 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 21 DNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGK 80 + + G AP CG M + ++D I + C AS++L+ + + G+ Sbjct: 21 ERLEIADGRAEKRAPICGSQMACDVCLDDNQHITEIGLDISACALGQASAALMGQDIIGR 80 Query: 81 SLDEAQA 87 SL E + Sbjct: 81 SLPELKE 87 >UniRef50_A8TTN5 Nitrogen-fixing NifU-like protein n=2 Tax=alpha proteobacterium BAL199 RepID=A8TTN5_9PROT Length = 144 Score = 44.1 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYEN-PRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++++D R+ SG + ACG +K+Q+ ++ I D + Sbjct: 8 YQDRLLDLAATIVRDGHVIPEP---TASGSAYSRACGSRIKVQVVLDGSR-ITDYGQQVD 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ--AIKNTDIAEELELPP-----------------V 102 C A++S+V V G ++ E + A + + + PP Sbjct: 64 ACALGSAAASVVGTAVVGLTVAEVRRAAAEMEAMLTKGGPPPGGAFTDLAALEPARSFTN 123 Query: 103 KIHCSILAEDAIKAAIA 119 + LA A++ A Sbjct: 124 RHGSMQLAFRALEKAFR 140 >UniRef50_C9RNY8 Nitrogen-fixing NifU domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNY8_FIBSS Length = 273 Score = 44.1 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 3 YSEKVIDHYENPRNVG---SFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARF 58 +S+K+ D + P+ G + +++ + V + +K+ + ++ E I + RF Sbjct: 9 FSQKLQDIAKAPKYRGAIFQIEADEKGLALVDVKEAS----LKVYLMIDPECDKILETRF 64 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV 102 TYG A + ++ ++D+A I + EEL P Sbjct: 65 FTYGGPLFTALADSFCRKIQMATVDDACKITAESLEEELRDTPD 108 >UniRef50_Q2NAI2 Fe-S cluster formation protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NAI2_ERYLH Length = 143 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 21/111 (18%) Query: 29 SGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSL------ 82 G +P+CG +++ + + + +E + C AS++L KG + Sbjct: 34 VGEARSPSCGSTLQIGLDLTSQSGVERIGLQVSACAIGQASAALFARDAKGHTRVSLENG 93 Query: 83 -------------DEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +E A D P + +L A A++ Sbjct: 94 MQRVANWLARESEEEPWA--GLDRVRAAREYPARHGAILLPWRAALDALSK 142 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochon... 171 5e-42 UniRef50_Q9UTC6 Iron sulfur cluster assembly protein 1, mitochon... 168 4e-41 UniRef50_Q48M04 FeS cluster assembly scaffold IscU n=27 Tax=Bact... 168 7e-41 UniRef50_Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitoch... 167 9e-41 UniRef50_Q6FJY3 Iron sulfur cluster assembly protein 1, mitochon... 164 5e-40 UniRef50_Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochon... 162 3e-39 UniRef50_A8B887 NifU-like protein n=3 Tax=Giardia intestinalis R... 162 3e-39 UniRef50_B6HTN3 Pc22g17800 protein n=15 Tax=Leotiomyceta RepID=B... 161 5e-39 UniRef50_Q2RHY6 Nitrogen-fixing NifU-like n=3 Tax=Clostridia Rep... 159 2e-38 UniRef50_D1B842 FeS cluster assembly scaffold protein NifU n=51 ... 159 3e-38 UniRef50_B0VFT7 Putative iron-sulfur cluster assembly scaffold (... 152 3e-36 UniRef50_D1YVK9 Putative iron sulfur cluster assembly protein n=... 152 3e-36 UniRef50_D2V9S9 Fe-S cluster biogenesis scaffold protein n=1 Tax... 152 4e-36 UniRef50_Q5CXH7 IscU-like NifU protein, iron-sulfur protein n=15... 151 8e-36 UniRef50_A8ZVA4 Nitrogen-fixing NifU domain protein n=5 Tax=cell... 151 8e-36 UniRef50_B3L9M4 NifU protein, putative n=3 Tax=Plasmodium RepID=... 148 4e-35 UniRef50_O67045 NifU-like protein n=9 Tax=Bacteria RepID=NIFU_AQUAE 148 5e-35 UniRef50_B8CWH6 Nitrogen-fixing NifU domain protein n=8 Tax=cell... 148 7e-35 UniRef50_B6KMM5 NifU protein, putative n=4 Tax=Toxoplasma gondii... 146 3e-34 UniRef50_B5Y9N0 NifU protein n=11 Tax=cellular organisms RepID=B... 144 8e-34 UniRef50_Q2LWE9 NifU-like protein involved in Fe-S cluster forma... 142 4e-33 UniRef50_Q2RIL0 Nitrogen-fixing NifU-like n=5 Tax=Clostridia Rep... 141 8e-33 UniRef50_UPI000023F408 hypothetical protein FG02624.1 n=1 Tax=Gi... 139 2e-32 UniRef50_UPI0000E4A7B0 PREDICTED: similar to NifU-like protein n... 139 3e-32 UniRef50_C9ZYX3 Iron-sulfur cluster assembly protein, putative n... 138 5e-32 UniRef50_B8EJ14 Fe-S cluster assembly protein NifU n=6 Tax=Prote... 138 6e-32 UniRef50_Q4FWA8 Iron-sulfur cluster assembly protein, putative n... 137 8e-32 UniRef50_B1L5A7 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 137 1e-31 UniRef50_C7I512 SUF system FeS assembly protein, NifU family n=1... 136 1e-31 UniRef50_P05340 Nitrogen fixation protein nifU n=15 Tax=cellular... 136 3e-31 UniRef50_Q0CL81 Iron sulfur cluster assembly protein 1, mitochon... 136 3e-31 UniRef50_D1C3Z4 SUF system FeS assembly protein, NifU family n=2... 135 3e-31 UniRef50_C5BTF8 Fe-S cluster assembly protein NifU n=4 Tax=Prote... 134 7e-31 UniRef50_B5IVA4 NifU-like N terminal domain protein n=1 Tax=Ther... 134 1e-30 UniRef50_A5UR74 SUF system FeS assembly protein, NifU family n=6... 133 2e-30 UniRef50_B6IR40 SUF system FeS assembly protein, NifU family n=2... 133 2e-30 UniRef50_B8HK33 SUF system FeS assembly protein, NifU family n=2... 133 2e-30 UniRef50_P05343 Nitrogen fixation protein nifU n=7 Tax=Bacteria ... 133 2e-30 UniRef50_B8I3D6 FeS cluster assembly scaffold protein NifU n=30 ... 133 2e-30 UniRef50_C7PDA7 Nitrogen-fixing NifU domain protein n=1 Tax=Chit... 132 4e-30 UniRef50_A1SV02 SUF system FeS assembly protein, NifU family pro... 130 1e-29 UniRef50_A5EYF1 SUF system FeS assembly protein, NifU family n=2... 130 2e-29 UniRef50_Q74DA8 NifU-like domain protein n=1 Tax=Geobacter sulfu... 129 4e-29 UniRef50_A1AQD6 Nitrogen-fixing NifU domain protein n=1 Tax=Pelo... 128 5e-29 UniRef50_B0R7Y3 Iron-sulfur cluster assembly protein n=5 Tax=Hal... 128 5e-29 UniRef50_P20628 Nitrogen fixation protein nifU n=46 Tax=Bacteria... 128 6e-29 UniRef50_B3DY81 NifU-like protein involved in Fe-S cluster forma... 128 7e-29 UniRef50_B6BSS9 SUF system FeS assembly protein, NifU family n=3... 128 7e-29 UniRef50_C9A1I3 SUF system FeS assembly protein n=2 Tax=Firmicut... 128 8e-29 UniRef50_B4D357 SUF system FeS assembly protein, NifU family n=4... 128 8e-29 UniRef50_A4J289 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 127 1e-28 UniRef50_Q2JCF1 SUF system FeS assembly protein n=86 Tax=Actinob... 126 2e-28 UniRef50_C1XI12 SUF system FeS assembly protein, NifU family n=2... 126 3e-28 UniRef50_O32163 NifU-like protein n=159 Tax=Bacillales RepID=NIF... 126 3e-28 UniRef50_B4SCB5 Nitrogen-fixing NifU domain protein n=11 Tax=Bac... 125 4e-28 UniRef50_Q2JUE7 SUF system FeS assembly protein, NifU family n=6... 124 8e-28 UniRef50_A6LUJ3 SUF system FeS assembly protein, NifU family n=5... 124 9e-28 UniRef50_Q39WZ1 Fe-S cluster assembly protein NifU n=33 Tax=cell... 124 9e-28 UniRef50_C7NMT9 SUF system FeS assembly protein, NifU family n=7... 124 9e-28 UniRef50_Q0F1C8 Putative uncharacterized protein n=1 Tax=Maripro... 124 1e-27 UniRef50_B3E6H1 Nitrogen-fixing NifU domain protein n=1 Tax=Geob... 124 1e-27 UniRef50_B6J805 IscU n=24 Tax=Bacteria RepID=B6J805_COXB1 123 1e-27 UniRef50_B3T2T4 Putative NifU-like N terminal domain protein n=1... 123 2e-27 UniRef50_A5FQV7 Nitrogen-fixing NifU domain protein n=5 Tax=Deha... 123 2e-27 UniRef50_B2GCP7 Nitrogen fixation protein n=69 Tax=Bacilli RepID... 123 2e-27 UniRef50_Q1AZN5 SUF system FeS assembly protein n=1 Tax=Rubrobac... 123 2e-27 UniRef50_B0K2I6 SUF system FeS assembly protein, NifU family n=1... 122 3e-27 UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubro... 122 4e-27 UniRef50_A7NG60 SUF system FeS assembly protein, NifU family n=2... 122 4e-27 UniRef50_D1JBD9 Putative NifU-like protein n=2 Tax=uncultured ar... 121 6e-27 UniRef50_C1I2Y9 SUF system FeS assembly protein n=2 Tax=Clostrid... 121 7e-27 UniRef50_A7H8S0 SUF system FeS assembly protein, NifU family n=3... 121 8e-27 UniRef50_Q1WR14 IscU protein n=10 Tax=Lactobacillus RepID=Q1WR14... 121 1e-26 UniRef50_Q04QC7 NifU related protein associated with Fe-S cluste... 120 1e-26 UniRef50_C5CEE1 SUF system FeS assembly protein, NifU family n=1... 120 2e-26 UniRef50_A0QX03 SUF system FeS assembly protein, NifU family pro... 119 2e-26 UniRef50_C7DI52 SUF system FeS assembly protein, NifU family n=1... 119 3e-26 UniRef50_Q03A02 Fe-S cluster formation protein, NifU-like n=8 Ta... 119 4e-26 UniRef50_A9NHI3 SUF system FeS cluster assembly protein n=10 Tax... 118 4e-26 UniRef50_C7M3C8 SUF system FeS assembly protein, NifU family n=1... 118 5e-26 UniRef50_Q02X70 NifU-like protein for Fe-S cluster formation n=2... 118 5e-26 UniRef50_Q1DD56 SUF system FeS assembly protein, NifU family n=2... 118 6e-26 UniRef50_D2QWB8 SUF system FeS assembly protein, NifU family n=2... 118 8e-26 UniRef50_A9BJG9 SUF system FeS assembly protein, NifU family n=1... 117 1e-25 UniRef50_Q1JIL3 IscU protein n=65 Tax=Bacilli RepID=Q1JIL3_STRPD 116 2e-25 UniRef50_A8YU52 NifU-like protein n=4 Tax=Lactobacillus RepID=A8... 116 2e-25 UniRef50_Q4UGE0 RNaseP-like protein with Nifu domain, putative n... 116 3e-25 UniRef50_Q9X192 NifU-like protein n=8 Tax=Thermotogaceae RepID=N... 116 3e-25 UniRef50_A9W9Z0 Nitrogen-fixing NifU domain protein n=3 Tax=Chlo... 115 5e-25 UniRef50_A1AQB7 Nitrogen-fixing NifU domain protein n=1 Tax=Pelo... 114 7e-25 UniRef50_O09257 NifU n=13 Tax=Bacteria RepID=O09257_CYAP8 114 8e-25 UniRef50_Q0AAQ4 SUF system FeS assembly protein, NifU family n=5... 114 1e-24 UniRef50_Q3JQE2 SUF system FeS assembly protein, NifU family n=3... 114 1e-24 UniRef50_B0S0D2 Iron-sulfur cofactor synthesis protein NifU homo... 114 1e-24 UniRef50_C1ZK76 Iron-sulfur cluster biosynthesis protein, NifU-l... 113 1e-24 UniRef50_B9L9A8 NifU family protein n=6 Tax=Epsilonproteobacteri... 113 2e-24 UniRef50_Q1ATZ0 SUF system FeS assembly protein n=2 Tax=Bacteria... 113 2e-24 UniRef50_B9XEV1 Nitrogen-fixing NifU domain protein n=2 Tax=Verr... 112 3e-24 UniRef50_Q3A8K8 NifU-like protein n=3 Tax=Desulfuromonadales Rep... 112 3e-24 UniRef50_UPI0001746083 putative FeS assembly protein n=1 Tax=Ver... 112 3e-24 UniRef50_B9L0V2 NifU family protein n=1 Tax=Thermomicrobium rose... 112 3e-24 UniRef50_D1JAT5 NifU-like protein n=2 Tax=uncultured archaeon Re... 111 5e-24 UniRef50_C5NYL7 SUF system FeS assembly protein, NifU family n=1... 111 5e-24 UniRef50_B6QUS0 Iron-sulfur cofactor synthesis protein (Isu1), p... 111 9e-24 UniRef50_C0VZ96 Possible iron-sulfur (Fe-S) cluster formation pr... 111 1e-23 UniRef50_Q21XB3 SUF system FeS assembly protein n=6 Tax=Bacteria... 111 1e-23 UniRef50_D1AKY8 SUF system FeS assembly protein, NifU family n=6... 110 1e-23 UniRef50_UPI0001C31C45 nitrogen-fixing NifU domain protein n=1 T... 110 1e-23 UniRef50_B8DUN6 SUF system FeS assembly protein, NifU family n=1... 110 1e-23 UniRef50_A0RRI4 Nitrogen fixation protein NifU n=55 Tax=cellular... 109 2e-23 UniRef50_C0WNL2 Iron-sulfur (Fe-S) cluster formation protein Isc... 109 3e-23 UniRef50_Q03UL7 Fe-S cluster formation protein, NifU-like n=2 Ta... 109 3e-23 UniRef50_C9KQH6 SUF system FeS assembly protein, NifU family n=1... 109 3e-23 UniRef50_Q04EW3 Fe-S cluster formation protein, NifU-like n=1 Ta... 109 4e-23 UniRef50_A9A1A8 SUF system FeS assembly protein, NifU family n=4... 109 4e-23 UniRef50_C1AC48 Iron-sulfur cluster biosynthesis protein n=1 Tax... 109 4e-23 UniRef50_C4Z7J6 Nitrogen fixation protein NifU-like protein n=10... 108 5e-23 UniRef50_B9KY40 NifU family protein n=1 Tax=Thermomicrobium rose... 107 8e-23 UniRef50_C9LR10 SUF system FeS assembly protein, NifU family n=1... 106 2e-22 UniRef50_C3RKP2 SUF system FeS cluster assembly protein n=6 Tax=... 106 3e-22 UniRef50_Q60A81 NifU family protein n=1 Tax=Methylococcus capsul... 106 3e-22 UniRef50_D1CFT0 Nitrogen-fixing NifU domain protein n=1 Tax=Ther... 106 3e-22 UniRef50_B1ML97 Similarity with Nitrogen-fixing NifU-like protei... 105 4e-22 UniRef50_B8FAZ4 Nitrogen-fixing NifU domain protein n=2 Tax=Desu... 105 4e-22 UniRef50_B1MVR5 NifU-like protein n=1 Tax=Leuconostoc citreum KM... 105 4e-22 UniRef50_D0RPD7 SUF system FeS assembly protein, NifU family n=1... 105 5e-22 UniRef50_Q023P2 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 104 6e-22 UniRef50_C8X380 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 104 8e-22 UniRef50_D1C3Y7 Nitrogen-fixing NifU domain protein n=1 Tax=Spha... 104 8e-22 UniRef50_B7K023 SUF system FeS assembly protein, NifU family n=2... 104 1e-21 UniRef50_A0LFU2 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 104 1e-21 UniRef50_C8W9P1 SUF system FeS assembly protein, NifU family n=6... 103 1e-21 UniRef50_C6C1H8 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 103 1e-21 UniRef50_A4EB20 Putative uncharacterized protein n=1 Tax=Collins... 103 2e-21 UniRef50_Q07HZ2 Nitrogen-fixing NifU domain protein n=7 Tax=Rhod... 103 2e-21 UniRef50_A5D4Q3 NifU homolog n=1 Tax=Pelotomaculum thermopropion... 102 3e-21 UniRef50_A8DR52 NifU n=1 Tax=uncultured bacterium RepID=A8DR52_9... 102 3e-21 UniRef50_B0RG88 NifU-like protein n=2 Tax=Clavibacter michiganen... 101 6e-21 UniRef50_B8CH94 FeS assembly protein n=1 Tax=Shewanella piezotol... 101 6e-21 UniRef50_Q1J1X4 SUF system FeS assembly protein n=4 Tax=Deinococ... 101 7e-21 UniRef50_B8FN62 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 101 1e-20 UniRef50_Q03GT9 Fe-S cluster formation protein, NifU-like n=3 Ta... 101 1e-20 UniRef50_C7MD35 SUF system FeS assembly protein, NifU family n=1... 100 2e-20 UniRef50_A1ZYV1 SUF system FeS assembly protein, NifU family n=1... 100 2e-20 UniRef50_B7GS89 SUF system FeS assembly protein, NifU family n=7... 100 3e-20 UniRef50_B7EPE4 cDNA clone:J013066C15, full insert sequence n=1 ... 99 5e-20 UniRef50_C1VDX7 Cysteine desulfurase n=2 Tax=Halobacteriaceae Re... 98 6e-20 UniRef50_C2BX07 Possible iron-sulfur (Fe-S) cluster formation pr... 98 6e-20 UniRef50_A6WDQ7 SUF system FeS assembly protein, NifU family n=1... 98 9e-20 UniRef50_UPI000050F718 SUF system FeS assembly protein n=1 Tax=B... 97 1e-19 UniRef50_B8FDL0 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 97 1e-19 UniRef50_C0QAY3 Predicted iron-sulfur cluster assembly protein (... 97 1e-19 UniRef50_A0LFS6 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 97 2e-19 UniRef50_A6Q975 Putative uncharacterized protein n=1 Tax=Sulfuro... 96 2e-19 UniRef50_Q7MYK4 Similarities with nitrogen fixation proteins n=2... 96 2e-19 UniRef50_C8P0L7 NifU domain protein n=2 Tax=Erysipelotrichaceae ... 96 2e-19 UniRef50_D2EEV4 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 96 3e-19 UniRef50_Q1IN98 Nitrogen-fixing NifU-like n=1 Tax=Candidatus Kor... 96 3e-19 UniRef50_D2MQI8 SUF system FeS assembly protein, NifU family n=1... 95 6e-19 UniRef50_Q0BSI3 IscU protein n=1 Tax=Granulibacter bethesdensis ... 95 6e-19 UniRef50_D2RA02 SUF system FeS assembly protein, NifU family n=1... 95 7e-19 UniRef50_Q2LWF0 NifU-like protein involved in Fe-S cluster forma... 95 9e-19 UniRef50_C7DHB6 Nitrogen-fixing NifU domain protein n=1 Tax=Cand... 94 1e-18 UniRef50_A6Q4J9 Putative uncharacterized protein n=1 Tax=Nitrati... 94 1e-18 UniRef50_A8F547 Nitrogen-fixing NifU domain protein n=1 Tax=Ther... 94 1e-18 UniRef50_B2S3K5 Nitrogen fixation protein n=4 Tax=Treponema RepI... 94 1e-18 UniRef50_B8FIH0 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 94 2e-18 UniRef50_C7ML19 SUF system FeS assembly protein, NifU family n=6... 93 2e-18 UniRef50_C6MSR1 Nitrogen-fixing NifU domain protein n=1 Tax=Geob... 93 2e-18 UniRef50_A5ICQ0 NifU family iron binding protein, [Fe-S] cluster... 93 3e-18 UniRef50_Q048H8 Fe-S cluster formation protein, NifU-like n=2 Ta... 93 3e-18 UniRef50_Q1AXD4 Nitrogen-fixing NifU-like protein n=1 Tax=Rubrob... 92 5e-18 UniRef50_Q8F7C7 NifU-like protein n=6 Tax=Leptospira RepID=Q8F7C... 91 9e-18 UniRef50_C7JBP3 NifU family SUF system FeS assembly protein n=8 ... 91 2e-17 UniRef50_Q14L11 Putative iron-sulfur cluster assembly protein n=... 90 2e-17 UniRef50_Q6APN8 Related to nitrogen fixation protein (NifU) n=1 ... 90 2e-17 UniRef50_A5G0T1 SUF system FeS assembly protein, NifU family n=2... 89 3e-17 UniRef50_Q65JA1 Fe-S cluster formation protein n=3 Tax=Bacillus ... 89 3e-17 UniRef50_A6GEC3 Putative uncharacterized protein n=1 Tax=Plesioc... 89 4e-17 UniRef50_A0JUB0 SUF system FeS assembly protein, NifU family n=6... 89 4e-17 UniRef50_B1VAA5 NifU homolog n=3 Tax=Candidatus Phytoplasma RepI... 88 6e-17 UniRef50_C0GTN3 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 88 6e-17 UniRef50_C5BVY5 SUF system FeS assembly protein, NifU family n=1... 88 7e-17 UniRef50_A9KE69 IscU n=6 Tax=Coxiella burnetii RepID=A9KE69_COXBN 88 7e-17 UniRef50_A8ZSW4 Nitrogen-fixing NifU domain protein n=1 Tax=Desu... 88 8e-17 UniRef50_B5JQP0 Putative uncharacterized protein n=1 Tax=Verruco... 88 9e-17 UniRef50_A1WM67 Nitrogen-fixing NifU domain protein n=1 Tax=Verm... 88 1e-16 UniRef50_B3R0D5 NifU-like protein n=1 Tax=Candidatus Phytoplasma... 87 1e-16 UniRef50_C6XNB0 Nitrogen-fixing NifU domain protein n=1 Tax=Hirs... 87 1e-16 UniRef50_B5JY19 FeS cluster assembly scaffold IscU n=1 Tax=gamma... 87 2e-16 UniRef50_Q134L6 NifU-like protein n=68 Tax=Alphaproteobacteria R... 86 3e-16 UniRef50_Q98AM0 Nitrogen fixation protein; NifU n=2 Tax=Mesorhiz... 85 6e-16 UniRef50_Q7NBI8 Putative uncharacterized protein n=1 Tax=Mycopla... 85 8e-16 UniRef50_Q01180 Nitrogen fixation protein nifU n=6 Tax=Rhodobact... 84 9e-16 UniRef50_B2IBC3 Nitrogen-fixing NifU domain protein n=23 Tax=Alp... 84 9e-16 UniRef50_A0LNT2 Nitrogen-fixing NifU domain protein n=1 Tax=Synt... 84 2e-15 UniRef50_C6N0B9 NifU family iron binding protein n=2 Tax=Legione... 83 3e-15 UniRef50_Q8EV25 Nitrogen fixation protein NifU n=1 Tax=Mycoplasm... 82 4e-15 UniRef50_B8EQR5 Nitrogen-fixing NifU domain protein n=2 Tax=Rhiz... 82 5e-15 UniRef50_A8PKG9 NifU-like protein, putative n=1 Tax=Brugia malay... 82 6e-15 UniRef50_B1AJ94 SUF system FeS assembly protein, NifU family n=1... 81 8e-15 UniRef50_C4XEA9 Putative uncharacterized protein n=1 Tax=Mycopla... 81 1e-14 UniRef50_Q0A8C0 Nitrogen-fixing NifU domain protein n=1 Tax=Alka... 80 2e-14 UniRef50_A8S193 Putative uncharacterized protein n=1 Tax=Clostri... 79 3e-14 UniRef50_C8WNS3 Nitrogen-fixing NifU domain protein n=3 Tax=Cori... 79 5e-14 UniRef50_C4XLN0 Nitrogen-fixing NifU-like N-terminal domain prot... 79 5e-14 UniRef50_C0QB63 Putative nitrogen fixation protein NifU (NifU-li... 79 6e-14 UniRef50_Q6KIL2 Aminotransferase protein U homolog n=1 Tax=Mycop... 78 9e-14 UniRef50_Q98R36 NITROGEN FIXATION PROTEIN NIFU n=1 Tax=Mycoplasm... 78 1e-13 UniRef50_B6BJX3 Putative NifU-like N terminal domain protein n=1... 77 2e-13 UniRef50_UPI00017430E0 nitrogen fixation protein (nifU) n=1 Tax=... 76 4e-13 UniRef50_B4RE93 NifU-like protein involved in Fe-S cluster forma... 76 5e-13 UniRef50_Q0YR11 Nitrogen-fixing NifU-like:BFD-like (2Fe-2S)-bind... 75 5e-13 UniRef50_C6ADY4 Nitrogen-fixing NifU-like protein n=5 Tax=Barton... 73 2e-12 UniRef50_C0D022 Putative uncharacterized protein n=1 Tax=Clostri... 73 4e-12 UniRef50_Q3KKX4 NifU n=8 Tax=Chlamydia RepID=Q3KKX4_CHLTA 72 6e-12 UniRef50_A8TRY7 Putative uncharacterized protein n=1 Tax=alpha p... 72 7e-12 UniRef50_C7MLZ4 NifU-like protein n=1 Tax=Cryptobacterium curtum... 71 8e-12 UniRef50_A3UF02 NifU-related protein involved in Fe-S cluster fo... 71 9e-12 UniRef50_Q5P5Y4 Possible NifU homolog n=1 Tax=Aromatoleum aromat... 71 1e-11 UniRef50_A4WRP9 NifU-like protein n=20 Tax=Rhodobacterales RepID... 70 2e-11 UniRef50_B0T0Z9 Nitrogen-fixing NifU domain protein n=2 Tax=Alph... 70 2e-11 UniRef50_Q4A687 Nitrogen fixation protein NifU n=2 Tax=Mycoplasm... 69 3e-11 UniRef50_B0RHZ4 Putative uncharacterized protein n=2 Tax=Claviba... 69 3e-11 UniRef50_Q0FGM6 NifU-related protein involved in Fe-S cluster fo... 68 6e-11 UniRef50_D1J7R1 Aminotransferase protein U homolog (Nitrogenfixa... 68 6e-11 UniRef50_B3PM56 IscU, NifU-like protein involved in Fe-S cluster... 68 7e-11 UniRef50_D2LAE9 Nitrogen-fixing NifU domain protein n=2 Tax=Desu... 68 9e-11 UniRef50_Q6MEW2 Putative iron-sulfur cluster assembly protein ni... 67 2e-10 UniRef50_Q30UA2 Putative uncharacterized protein n=1 Tax=Sulfuri... 66 3e-10 UniRef50_D0XJK8 NifU-like protein involved in Fe-S cluster forma... 66 4e-10 UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)... 66 5e-10 UniRef50_A5V259 NifU-like involved in Fe-S cluster formation n=2... 65 6e-10 UniRef50_Q256A8 NifU-related protein n=7 Tax=Chlamydophila RepID... 65 6e-10 UniRef50_UPI0000D53F18 NifU-like N terminal domain n=1 Tax=Psych... 65 7e-10 UniRef50_Q1V286 NifU-like N terminal domain protein n=2 Tax=Cand... 65 7e-10 UniRef50_Q3A7R9 NifU-like protein n=2 Tax=Desulfuromonadales Rep... 65 8e-10 UniRef50_A8TTN5 Nitrogen-fixing NifU-like protein n=2 Tax=alpha ... 64 1e-09 UniRef50_B0S9Z7 NifU related protein associated with Fe-S cluste... 64 2e-09 UniRef50_Q4AAG9 Putative uncharacterized protein n=5 Tax=Mycopla... 63 4e-09 UniRef50_P47579 Uncharacterized protein MG337 n=1 Tax=Mycoplasma... 62 5e-09 UniRef50_Q6MTA6 NITROGEN FIXATION PROTEIN NIFU n=4 Tax=Mollicute... 60 2e-08 UniRef50_D0WJI3 Putative type I restriction-modification system,... 60 3e-08 UniRef50_C5TE59 NifU-like involved in Fe-S cluster formation n=3... 59 5e-08 UniRef50_A5IXL2 Nitrogen fixation protein NifU n=1 Tax=Mycoplasm... 57 2e-07 UniRef50_B6BGH4 Putative NifU-like N terminal domain protein n=1... 57 2e-07 UniRef50_C9RNY8 Nitrogen-fixing NifU domain protein n=1 Tax=Fibr... 56 4e-07 UniRef50_B1VA18 NifU homolog involved in Fe-S cluster formation ... 56 4e-07 UniRef50_C7LUF1 Putative uncharacterized protein n=1 Tax=Desulfo... 53 3e-06 Sequences not found previously or not previously below threshold: UniRef50_A3VNK5 Putative uncharacterized protein n=1 Tax=Parvula... 53 2e-06 >UniRef50_Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochondrial n=82 Tax=cellular organisms RepID=ISU1_YARLI Length = 181 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 93/127 (73%), Positives = 111/127 (87%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y EKV+DHY NPRNVGS + NDE+VG+G+VGAPACGDVMKLQI+V+D G+I+D +FKT+ Sbjct: 36 GYHEKVLDHYNNPRNVGSMNKNDEDVGTGLVGAPACGDVMKLQIRVDDNGVIQDVKFKTF 95 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS VTE V+GKSL EA IKNT IA+EL LPPVK+HCS+LAEDAIK+AI+DY Sbjct: 96 GCGSAIASSSYVTELVRGKSLAEAGKIKNTVIAKELSLPPVKLHCSMLAEDAIKSAISDY 155 Query: 122 KSKREAK 128 SKR+ K Sbjct: 156 NSKRKTK 162 >UniRef50_Q9UTC6 Iron sulfur cluster assembly protein 1, mitochondrial n=5 Tax=Dikarya RepID=ISU1_SCHPO Length = 192 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 81/124 (65%), Positives = 101/124 (81%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + V+DHY NPRNVG+ D +VG G+VGAPACGDVM+L I+VN +G+IED +FKT+ Sbjct: 53 MYHKNVLDHYNNPRNVGTLPKGDPDVGIGLVGAPACGDVMRLAIRVNKDGVIEDVKFKTF 112 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS VT VKG +L+EA IKNT IA+EL LPPVK+HCS+LAEDAIK+A+ Y Sbjct: 113 GCGSAIASSSYVTTMVKGMTLEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVKHY 172 Query: 122 KSKR 125 +SK+ Sbjct: 173 RSKQ 176 >UniRef50_Q48M04 FeS cluster assembly scaffold IscU n=27 Tax=Bacteria RepID=Q48M04_PSE14 Length = 128 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 99/126 (78%), Positives = 114/126 (90%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MAYSEKVIDHYENPRNVG + D +VG+GMVGAPACGDVM+LQIKVN++G+IEDA+FKT Sbjct: 1 MAYSEKVIDHYENPRNVGKMNAEDPDVGTGMVGAPACGDVMRLQIKVNEQGVIEDAKFKT 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 YGCGSAIASSSL TEW+KGK+LDEA+ IKNT +AEEL LPPVKIHCS+LAEDAIKAA+ D Sbjct: 61 YGCGSAIASSSLATEWMKGKTLDEAETIKNTQLAEELALPPVKIHCSVLAEDAIKAAVRD 120 Query: 121 YKSKRE 126 YK K+ Sbjct: 121 YKQKKG 126 >UniRef50_Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial n=633 Tax=root RepID=ISCU_HUMAN Length = 167 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 95/127 (74%), Positives = 113/127 (88%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y +KV+DHYENPRNVGS D +NVG+G+VGAPACGDVMKLQI+V+++G I DARFKT+ Sbjct: 34 LYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTF 93 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSSL TEWVKGK+++EA IKNTDIA+EL LPPVK+HCS+LAEDAIKAA+ADY Sbjct: 94 GCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADY 153 Query: 122 KSKREAK 128 K K+E K Sbjct: 154 KLKQEPK 160 >UniRef50_Q6FJY3 Iron sulfur cluster assembly protein 1, mitochondrial n=3 Tax=Dikarya RepID=ISU1_CANGA Length = 213 Score = 164 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 90/127 (70%), Positives = 106/127 (83%), Gaps = 1/127 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKT 60 Y KVI+HY +PRNVGS D NVG+G+VGAPACGDVM+LQIKVND+ G+IED +FKT Sbjct: 82 MYHPKVIEHYTHPRNVGSMDKTLPNVGTGLVGAPACGDVMRLQIKVNDKTGVIEDVKFKT 141 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIASSS +TE V G +LD+A IKNT IA+EL LPPVK+HCS+LAEDAIKAAI D Sbjct: 142 FGCGSAIASSSYMTELVHGMTLDDAAKIKNTTIAKELSLPPVKLHCSMLAEDAIKAAIKD 201 Query: 121 YKSKREA 127 YKSKR + Sbjct: 202 YKSKRTS 208 >UniRef50_Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochondrial n=6 Tax=Dikarya RepID=ISU1_KLULA Length = 180 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 91/124 (73%), Positives = 108/124 (87%), Gaps = 1/124 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 Y KVIDHY NPRNVGS D N NVG+G+VGAPACGDVMKLQI+VNDE G+IE+ +FKT+ Sbjct: 51 YHPKVIDHYTNPRNVGSLDKNLPNVGTGLVGAPACGDVMKLQIQVNDETGVIENVKFKTF 110 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GCGSAIASSS +TE V+GK+L++A IKNT+IA EL LPPVK+HCS+LAEDAIKAAI DY Sbjct: 111 GCGSAIASSSYMTELVRGKTLEDAAKIKNTEIARELSLPPVKLHCSMLAEDAIKAAIKDY 170 Query: 122 KSKR 125 ++KR Sbjct: 171 QAKR 174 >UniRef50_A8B887 NifU-like protein n=3 Tax=Giardia intestinalis RepID=A8B887_GIALA Length = 212 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 82/126 (65%), Positives = 105/126 (83%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YSE + HY P N+G+ D++DE+VGSG+VGAPACGDVM+LQIKV D+G I +A+FKT+G Sbjct: 80 YSELAMQHYRTPVNIGTLDDDDEHVGSGLVGAPACGDVMRLQIKVGDDGKISEAKFKTFG 139 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CG+AIASSS T ++GKSL+EA IKNTDI+++L LPPVK+HCS+LAEDAI+ AI DYK Sbjct: 140 CGAAIASSSYATSLLQGKSLEEASQIKNTDISDKLGLPPVKLHCSVLAEDAIRQAIDDYK 199 Query: 123 SKREAK 128 KR +K Sbjct: 200 RKRGSK 205 >UniRef50_B6HTN3 Pc22g17800 protein n=15 Tax=Leotiomyceta RepID=B6HTN3_PENCW Length = 199 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 87/124 (70%), Positives = 105/124 (84%), Gaps = 1/124 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 Y EKV+DHY NPRNVGS D++VG+G+VGAPACGDVMKLQI+VN D G I+D FKT Sbjct: 47 GYHEKVLDHYNNPRNVGSMKKGDQDVGTGLVGAPACGDVMKLQIRVNKDSGRIDDVVFKT 106 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIASSS +TE V+G +LDEA IKNTD+A+EL LPPVK+HCS+LAEDAIK+AIA+ Sbjct: 107 FGCGSAIASSSYLTELVRGMTLDEAGKIKNTDVAKELCLPPVKLHCSMLAEDAIKSAIAN 166 Query: 121 YKSK 124 Y +K Sbjct: 167 YYTK 170 >UniRef50_Q2RHY6 Nitrogen-fixing NifU-like n=3 Tax=Clostridia RepID=Q2RHY6_MOOTA Length = 125 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 73/126 (57%), Positives = 94/126 (74%), Gaps = 5/126 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEKV+DH+ NPRNVG +N D G G VG P CGD+M+L IKV D GII+D +FKT+ Sbjct: 1 MYSEKVMDHFTNPRNVGEIENAD---GVGQVGNPVCGDIMRLYIKVED-GIIKDVKFKTF 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCG+AIA+SS+VTE VKGK+++EA I N +AE L LPP K+HCS LA DA+ AI D Sbjct: 57 GCGAAIATSSMVTEMVKGKTVEEALKISNAAVAEALDGLPPQKMHCSNLAADALHKAIED 116 Query: 121 YKSKRE 126 Y+++ + Sbjct: 117 YQNRNK 122 >UniRef50_D1B842 FeS cluster assembly scaffold protein NifU n=51 Tax=cellular organisms RepID=D1B842_THEAS Length = 150 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 69/129 (53%), Positives = 92/129 (71%), Gaps = 5/129 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MAYSEKV+ ++ NP NVG + D G G VG P CGDVMK+ +++ D G IED RF+T Sbjct: 1 MAYSEKVVQYFMNPVNVGELPDPD---GVGEVGNPKCGDVMKIYLRIRD-GKIEDVRFQT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIA 119 +GC +AIA+SS+VTE VKGK++DEA + N D+AE LPP K+HCS+LAE I+AAI Sbjct: 57 FGCAAAIATSSMVTEMVKGKTIDEALNVTNKDVAEALGGLPPEKVHCSLLAEQGIRAAIE 116 Query: 120 DYKSKREAK 128 DY ++ + Sbjct: 117 DYLRRQRGE 125 >UniRef50_B0VFT7 Putative iron-sulfur cluster assembly scaffold (IscU module) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFT7_9BACT Length = 207 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 86/130 (66%), Gaps = 5/130 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFK 59 M YS+KV+DH+ +P NVG +N D G+PACGD + + +KV+D+ I D F Sbjct: 1 MQYSQKVLDHFMHPHNVGKMENPD---AVATEGSPACGDQVTVYLKVDDKTKTITDISFL 57 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAI 118 +YGC S IA++S++T+ KGK+L+EA+ I D + L LPPVK+HCS+LA D +++AI Sbjct: 58 SYGCASNIATASIITDMAKGKTLEEAKKITWRDAMDALDGLPPVKVHCSVLAADTLQSAI 117 Query: 119 ADYKSKREAK 128 ++Y+ K Sbjct: 118 SNYEIAHGLK 127 >UniRef50_D1YVK9 Putative iron sulfur cluster assembly protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YVK9_METPS Length = 151 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 5/128 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS KV+ H+ NP+NVG + D G G VG P CGD+M + IKV D + D +FKT Sbjct: 1 MMYSPKVMQHFSNPQNVGEIPDAD---GVGEVGNPVCGDLMTIYIKVKDNKL-SDIKFKT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 +GC +AIA+SS++T KG +L++A I D+A E LPP K+HCS LA DA+K AI Sbjct: 57 FGCAAAIATSSIITTMAKGMTLEDAVKISRNDVAKELGGLPPQKMHCSNLAADALKLAIE 116 Query: 120 DYKSKREA 127 +Y+ K + Sbjct: 117 NYRRKLQG 124 >UniRef50_D2V9S9 Fe-S cluster biogenesis scaffold protein n=1 Tax=Naegleria gruberi RepID=D2V9S9_NAEGR Length = 179 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 74/120 (61%), Positives = 92/120 (76%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+KVIDH++NPRN GS D D NVG+ +VGAP+CGDV+K QI V+D G + DA+FK +G Sbjct: 40 YSDKVIDHHKNPRNSGSLDAKDANVGTALVGAPSCGDVLKFQILVDDNGKVIDAKFKAFG 99 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSS TE VKGK++++ I N DIA L LPPVK HCS+LAE+AI+ A DY Sbjct: 100 CGSAIASSSYATELVKGKTIEDCMMITNNDIASHLSLPPVKKHCSLLAEEAIRKATEDYM 159 >UniRef50_Q5CXH7 IscU-like NifU protein, iron-sulfur protein n=15 Tax=cellular organisms RepID=Q5CXH7_CRYPV Length = 150 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 72/125 (57%), Positives = 98/125 (78%), Gaps = 1/125 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + YS+ V DH+ NPRNVGS ++D+NVG+ +VG +CGDV+KLQ+ + D GII+DA+FKT Sbjct: 24 LFYSDTVHDHFRNPRNVGSLPSDDKNVGTAVVGKASCGDVVKLQVDIRD-GIIKDAKFKT 82 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIAS+S TE + GK+ +EA I N IA+ L LPP+K+HCS+LAEDAIK AI + Sbjct: 83 FGCGSAIASTSYATELIIGKTTEEALKINNKTIADHLNLPPIKLHCSLLAEDAIKHAIKN 142 Query: 121 YKSKR 125 Y+ K+ Sbjct: 143 YQDKQ 147 >UniRef50_A8ZVA4 Nitrogen-fixing NifU domain protein n=5 Tax=cellular organisms RepID=A8ZVA4_DESOH Length = 173 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 5/129 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS+ V+DH+ NPRNVG +N G G VG P CGD+M + + + D+ I D +F+T Sbjct: 1 MIYSKTVMDHFRNPRNVGVIENA---AGVGEVGNPICGDMMTIYLDIQDDR-IADIKFQT 56 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 +GCGSAIA SS++TE KGK+L+EA+ I N D+AE L LP K+HCS L DA++ AI Sbjct: 57 FGCGSAIAVSSMLTELAKGKTLEEAKKITNKDVAEALEGLPKNKLHCSNLGADALQMAIK 116 Query: 120 DYKSKREAK 128 DY+ ++ K Sbjct: 117 DYEDRKAGK 125 >UniRef50_B3L9M4 NifU protein, putative n=3 Tax=Plasmodium RepID=B3L9M4_PLAKH Length = 170 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 97/122 (79%), Gaps = 1/122 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+ V DH+ PRNVGSFD N++N+G+ +VG +CGDV+KLQ+K+ D +I+DARF +G Sbjct: 47 YSDHVKDHFNKPRNVGSFDKNEKNIGTSIVGKASCGDVIKLQLKIEDN-VIKDARFMAFG 105 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYK 122 CGSAIASSS TE +KGK++DEA IKN DIA L LPPVKIHCS+LAEDAIK AI +Y+ Sbjct: 106 CGSAIASSSYATELIKGKTIDEALKIKNNDIASHLSLPPVKIHCSLLAEDAIKHAIKNYR 165 Query: 123 SK 124 K Sbjct: 166 EK 167 >UniRef50_O67045 NifU-like protein n=9 Tax=Bacteria RepID=NIFU_AQUAE Length = 157 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 65/126 (51%), Positives = 82/126 (65%), Gaps = 5/126 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTY 61 Y+EKV+DH+ NPRNVG ++ + G G G PACGD M IKVN + +IED RFKT+ Sbjct: 5 YNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTF 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIA SS++TE VKGK + A + DI EE LPP KIHC+ L + + AI D Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKD 121 Query: 121 YKSKRE 126 Y K+ Sbjct: 122 YLMKQG 127 >UniRef50_B8CWH6 Nitrogen-fixing NifU domain protein n=8 Tax=cellular organisms RepID=B8CWH6_HALOH Length = 138 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 5/127 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEKV++H+ NPRNVG + D G VG P CGD++KL +K+ D+ IED +FKT+ Sbjct: 1 MYSEKVMEHFNNPRNVGEIKDAD---AVGEVGNPVCGDIIKLYLKIKDD-TIEDIKFKTF 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCG+A+A+SS+VTE VKGK +DEA + +AE L LP K+HCS LA DA+ AI Sbjct: 57 GCGAAVATSSMVTELVKGKKIDEALKVSKETVAEALDGLPSNKMHCSNLAADALHKAIKS 116 Query: 121 YKSKREA 127 Y K + Sbjct: 117 YNKKDNS 123 >UniRef50_B6KMM5 NifU protein, putative n=4 Tax=Toxoplasma gondii RepID=B6KMM5_TOXGO Length = 219 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 77/128 (60%), Positives = 99/128 (77%), Gaps = 5/128 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN----VGSGMVGAPACGDVMKLQIKVNDEGIIEDARF 58 YS+KV +H+ NP+N G+FD +D VG+ +VG ACGDV+KLQ+ V D G I DARF Sbjct: 66 YSKKVHEHFFNPKNAGAFDLSDPETRSKVGTAVVGKAACGDVIKLQVLVED-GKIRDARF 124 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAI 118 KT+GCGSAIASSS TE +KGK+ D+A +KNTDIAE L LPPVK+HCS+LAEDA++ AI Sbjct: 125 KTFGCGSAIASSSYATELIKGKTCDDALKLKNTDIAEYLNLPPVKVHCSLLAEDAVRHAI 184 Query: 119 ADYKSKRE 126 DY+ K++ Sbjct: 185 LDYQKKQK 192 >UniRef50_B5Y9N0 NifU protein n=11 Tax=cellular organisms RepID=B5Y9N0_COPPD Length = 212 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 59/123 (47%), Positives = 87/123 (70%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ KVI+H++NP N G +N D +VG+PACGD + + +K+N++ +IED +F++YG Sbjct: 5 YNPKVIEHFKNPHNQGVIENPD---AEALVGSPACGDQIAIYLKINND-VIEDIKFESYG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIK-NTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 C S IA++S+VT+ KGK+L+EA +IK + E LPPVK HCS+LA D ++AAI DY Sbjct: 61 CASNIATASIVTDLAKGKTLEEALSIKWTEAVQELGGLPPVKYHCSVLAVDGLRAAIKDY 120 Query: 122 KSK 124 K Sbjct: 121 LRK 123 >UniRef50_Q2LWE9 NifU-like protein involved in Fe-S cluster formation with 2Fe-2S domain n=2 Tax=Bacteria RepID=Q2LWE9_SYNAS Length = 229 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 55/126 (43%), Positives = 86/126 (68%), Gaps = 4/126 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++KV +H+ NPRNVG +N D G G VG+ ACGD ++L K+++ I++A+FK++G Sbjct: 4 YTDKVREHFWNPRNVGEVENPD---GIGQVGSLACGDALRLTFKLDENKRIKEAKFKSFG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIADY 121 C SAIA++S++TE V G ++++A+ I N DI A LP K+HCS+L E ++ AIA Y Sbjct: 61 CASAIAAASVLTEMVVGLTIEQAEKITNQDIAAALGGLPEQKMHCSVLGEQVLEKAIACY 120 Query: 122 KSKREA 127 + + Sbjct: 121 RGRPAG 126 >UniRef50_Q2RIL0 Nitrogen-fixing NifU-like n=5 Tax=Clostridia RepID=Q2RIL0_MOOTA Length = 139 Score = 141 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 55/127 (43%), Positives = 82/127 (64%), Gaps = 5/127 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + VIDH+ NPRNVG ++ D G G +G P CGD + + IKV D ++ D +F+ + Sbjct: 1 MYGDLVIDHFLNPRNVGRIEDAD---GIGAIGDPGCGDYLCIYIKVRDNRLV-DVKFQVH 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 GC +AIA+SS++TE +GK+L+E I + D+A LP VK+HCS L A+ AI + Sbjct: 57 GCPAAIATSSILTEMARGKTLEEGLRITDADVAAAIGGLPEVKLHCSNLGASALHDAIRN 116 Query: 121 YKSKREA 127 Y++K +A Sbjct: 117 YQAKMQA 123 >UniRef50_UPI000023F408 hypothetical protein FG02624.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F408 Length = 211 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 82/142 (57%), Positives = 103/142 (72%), Gaps = 20/142 (14%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 Y EKV+DHY PRNVGS + D +VG+G+VGAPACGDVMKLQI+V+ E I + +FKT+ Sbjct: 43 YHEKVLDHYSRPRNVGSMNKKDADVGTGLVGAPACGDVMKLQIRVDPETQKISEVKFKTF 102 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVK------------------ 103 GCGSAIASSS +TE V+G SLD+A +KNT+IA+EL LPPVK Sbjct: 103 GCGSAIASSSYLTELVRGMSLDDAGKVKNTEIAKELCLPPVKRTLSHHAAYYIDTQTDFN 162 Query: 104 -IHCSILAEDAIKAAIADYKSK 124 +HCS+LAEDAIK+AI+DY +K Sbjct: 163 IVHCSMLAEDAIKSAISDYYTK 184 >UniRef50_UPI0000E4A7B0 PREDICTED: similar to NifU-like protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A7B0 Length = 163 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 74/127 (58%), Positives = 100/127 (78%), Gaps = 1/127 (0%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKTY 61 Y + VIDHYENPRNVG+ D ND+NVG+G+VGAPACGDVMKLQ++++D+ I++ Sbjct: 32 YHKNVIDHYENPRNVGAMDKNDKNVGTGLVGAPACGDVMKLQVQISDKKHGIDNVAISDV 91 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121 GC S +++S T +G +DEA+ IKNTDIA+EL LPPVK+HCS+LAEDAIKAA+ DY Sbjct: 92 GCCSLMSTSMEYTNLCRGMHVDEAKDIKNTDIAKELSLPPVKLHCSMLAEDAIKAALQDY 151 Query: 122 KSKREAK 128 + K+++K Sbjct: 152 RVKQDSK 158 >UniRef50_C9ZYX3 Iron-sulfur cluster assembly protein, putative n=3 Tax=Trypanosoma RepID=C9ZYX3_TRYBG Length = 180 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 69/127 (54%), Positives = 95/127 (74%), Gaps = 1/127 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 YS V +HY NPRNVG D +D NVG+G+ GAP CGD+ ++Q+KVN E +IED +FK Sbjct: 21 LYSPLVEEHYNNPRNVGKLDKSDPNVGTGLRGAPECGDMTQMQVKVNPETMVIEDVKFKA 80 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIA+SS ++ ++GK+L EA + N IA+EL LPPVK+HCS+LAE+ I+AA+ + Sbjct: 81 FGCGSAIAASSYASQAIRGKTLAEALQLTNKRIAQELSLPPVKLHCSMLAEETIQAAVEN 140 Query: 121 YKSKREA 127 Y SK + Sbjct: 141 YLSKNPS 147 >UniRef50_B8EJ14 Fe-S cluster assembly protein NifU n=6 Tax=Proteobacteria RepID=B8EJ14_METSB Length = 344 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 86/126 (68%), Gaps = 5/126 (3%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFK 59 + YS+K+ DH+ NP+N G + + G GA +CGD +KL +KV+ +I DARF+ Sbjct: 11 LDYSDKIKDHFFNPKNAGPLADAN---AVGEAGALSCGDALKLMLKVDPLTEVILDARFQ 67 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAI 118 T+GCGSAIASSS +TE + GK++ +A + N IAE LPP K+HC++L DA++AAI Sbjct: 68 TFGCGSAIASSSALTELIIGKTIVQAAGLTNQQIAESLGGLPPEKMHCAVLGHDALQAAI 127 Query: 119 ADYKSK 124 A+++ + Sbjct: 128 ANFRGE 133 >UniRef50_Q4FWA8 Iron-sulfur cluster assembly protein, putative n=9 Tax=Eukaryota RepID=Q4FWA8_LEIMA Length = 161 Score = 137 bits (346), Expect = 8e-32, Method: Composition-based stats. Identities = 70/124 (56%), Positives = 96/124 (77%), Gaps = 1/124 (0%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 YS+KV DHY+NPRNVG D ND NVG+G+ GAP CGD+ ++Q+KVN + +IED +FK Sbjct: 19 LYSDKVQDHYKNPRNVGKLDKNDPNVGTGLRGAPECGDMTQMQVKVNPDTLVIEDVKFKA 78 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 +GCGSAIA+SS ++ ++GK++ +A + N DIA EL LPPVK+HCS+LAE+ I AA+ + Sbjct: 79 FGCGSAIAASSYASQAIRGKTVADALKLTNKDIAHELSLPPVKLHCSMLAEETIHAAVEN 138 Query: 121 YKSK 124 Y SK Sbjct: 139 YLSK 142 >UniRef50_B1L5A7 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5A7_KORCO Length = 160 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y+ +V++ + P+N+G D+ D G+PACGDV+ + +++ D G+IEDA+F++ Sbjct: 7 LPYTPRVLELFREPKNLGRIDDADAF---AQAGSPACGDVISIYLRIRD-GVIEDAKFES 62 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 YGC + IA++S++TE VKGK L+EA I IA E LPPVK HCSILA A++ AI Sbjct: 63 YGCAANIAAASVLTEIVKGKRLEEAWNIDWQQIADELGGLPPVKKHCSILAVGALRRAIR 122 Query: 120 DY 121 Y Sbjct: 123 RY 124 >UniRef50_C7I512 SUF system FeS assembly protein, NifU family n=1 Tax=Thiomonas intermedia K12 RepID=C7I512_THIIN Length = 165 Score = 136 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 22/136 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E + DHY PR+ G + P CGD ++L++ V+D G I+D F Sbjct: 16 LYQEVIFDHYRRPRHFGHLPQPNRC---AQGDNPLCGDRLELELFVDDAGCIQDVAFTGE 72 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQA-------------------IKNTDIAEELELPPV 102 GC + AS+SL+TE VKGK +DEA + + + P Sbjct: 73 GCAISTASASLLTEAVKGKRVDEALTLFVQMHGILVDGDTGAEAGLGKLAVLAGVRQFPA 132 Query: 103 KIHCSILAEDAIKAAI 118 ++ C++LA ++ A+ Sbjct: 133 RVKCAMLAWHTLRNAL 148 >UniRef50_P05340 Nitrogen fixation protein nifU n=15 Tax=cellular organisms RepID=NIFU_AZOVI Length = 312 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 62/124 (50%), Positives = 90/124 (72%), Gaps = 5/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 YSEKV +H+ NP+N G+ + + G VG+ +CGD ++L +KV+ E +I DA F+T+ Sbjct: 4 YSEKVKEHFYNPKNAGAVEGAN---AIGDVGSLSCGDALRLTLKVDPETDVILDAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE VKG +LDEA I N DIA+ L LPP K+HCS++ +A++AA+A+ Sbjct: 61 GCGSAIASSSALTEMVKGLTLDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAN 120 Query: 121 YKSK 124 Y+ + Sbjct: 121 YRGE 124 >UniRef50_Q0CL81 Iron sulfur cluster assembly protein 1, mitochondrial n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CL81_ASPTN Length = 179 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 78/139 (56%), Positives = 100/139 (71%), Gaps = 21/139 (15%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG----------IIE-- 54 ++DHY NPRNVGS + D +VGSG+VGAPACGDVMKLQI+V+ + II+ Sbjct: 7 LLDHYNNPRNVGSMNRKDLDVGSGLVGAPACGDVMKLQIRVDKDTNTISGTPPPSIIDIM 66 Query: 55 ---------DARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIH 105 D +FKT+GCGSAIASSS +TE V+G +L+EA + N IA+EL LPPVK+H Sbjct: 67 DDPANMLTIDVKFKTFGCGSAIASSSYLTELVRGMTLEEAGKVTNVAIAKELCLPPVKLH 126 Query: 106 CSILAEDAIKAAIADYKSK 124 CS+LAEDAIK+AI+DY +K Sbjct: 127 CSMLAEDAIKSAISDYYTK 145 >UniRef50_D1C3Z4 SUF system FeS assembly protein, NifU family n=2 Tax=cellular organisms RepID=D1C3Z4_SPHTD Length = 127 Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 6/118 (5%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DHY NPRN G+ +N D + P CGD +++ +++ D G I + +F Sbjct: 4 LYRENILDHYRNPRNYGTIENADISY---EDSNPLCGDRVRIDMRIED-GKIVEIKFSGR 59 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAA 117 GC + AS+S++TE V+G LDE + + DI +EL +P P ++ C++L +K+A Sbjct: 60 GCAISQASASMLTEMVEGADLDEIRELSAQDILDELGVPISPARVKCALLGLKVLKSA 117 >UniRef50_C5BTF8 Fe-S cluster assembly protein NifU n=4 Tax=Proteobacteria RepID=C5BTF8_TERTT Length = 317 Score = 134 bits (338), Expect = 7e-31, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 89/123 (72%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 YSEKV +H+ +P+N G+ + + +G VG+ +CGD ++L +KV+ II+DA F+T+ Sbjct: 4 YSEKVKEHFFDPKNAGAVADAN---ATGDVGSLSCGDALRLTLKVDPATDIIQDAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE +KG +DEA I N DIA+ L LPP K+HCS++ +A++AA+AD Sbjct: 61 GCGSAIASSSALTEMIKGLHVDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAD 120 Query: 121 YKS 123 Y+ Sbjct: 121 YRG 123 >UniRef50_B5IVA4 NifU-like N terminal domain protein n=1 Tax=Thermococcus barophilus MP RepID=B5IVA4_9EURY Length = 216 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 50/122 (40%), Positives = 86/122 (70%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + YS KV+ ++ +P+NVG +N + G+PACGD++KL +K+ ++ I+ DA+F++ Sbjct: 15 IGYSRKVLYYFLHPKNVGEIENPSV---TAKAGSPACGDMIKLYLKIENDKIV-DAKFRS 70 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIA 119 YGC + IA++S++TE + GK+++EA+ IK DI EE LP +K HC++LA + +K A+A Sbjct: 71 YGCAANIATASVLTEMIIGKTVEEAKKIKFKDIVEELGGLPQIKYHCAVLAAEGLKQALA 130 Query: 120 DY 121 + Sbjct: 131 KW 132 >UniRef50_A5UR74 SUF system FeS assembly protein, NifU family n=6 Tax=Chloroflexi (class) RepID=A5UR74_ROSS1 Length = 132 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +++HY++PR G D+ D S P CGD +++ +++ + GII DARF Sbjct: 4 LYRELILEHYKHPRRRGRIDHPDV---SAEEHNPLCGDRVRIDLRI-ENGIITDARFDGR 59 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP----PVKIHCSILAEDAIKAA 117 GC + AS+S++TE + G +++A+ + + +P PV+I C++L +K Sbjct: 60 GCAISQASASMLTEEIVGMPVEQAKQFSKDQMLALIGIPLNHNPVRIKCALLPLKTLKVG 119 Query: 118 I 118 + Sbjct: 120 L 120 >UniRef50_B6IR40 SUF system FeS assembly protein, NifU family n=2 Tax=Proteobacteria RepID=B6IR40_RHOCS Length = 160 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 29/144 (20%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DH +PRN G + P CGD + + + V+D+G+I DA F Sbjct: 8 LYQEVILDHGRHPRNFGR---PATFNRTARGDNPMCGDKITIYLTVSDDGVITDAGFDGR 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA--------------------------QAIKNTDIAE 95 GC + AS+SL+TE +KG+ + EA +A+ + Sbjct: 65 GCAISQASASLMTEILKGRPVAEAEALFGRFHDMCTKDEDQWGTHGPVDEEALDKLQVLS 124 Query: 96 ELELPPVKIHCSILAEDAIKAAIA 119 + P+++ C+ LA + AA+ Sbjct: 125 GVREFPMRVKCATLAWHTMHAALQ 148 >UniRef50_B8HK33 SUF system FeS assembly protein, NifU family n=2 Tax=Chroococcales RepID=B8HK33_CYAP4 Length = 165 Score = 133 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 21/137 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +++HY+ PR+ G + P+CGD ++L +++++ G I D +F+ Sbjct: 9 LYQQVILEHYKKPRHRG---KTNPVHRHQRGHNPSCGDTIELTVQLDETGRIADIKFEGE 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTD------------------IAEELELPPVK 103 GC A++S+ L+ + +GK++ EA A+ + + + PV+ Sbjct: 66 GCAIALSSADLMADAARGKTIPEALAMVQQFQTMMKGEGEFPKDLRKLNVMQGVAQFPVR 125 Query: 104 IHCSILAEDAIKAAIAD 120 I C+ L ++AA+ D Sbjct: 126 IKCATLTWHTLRAALED 142 >UniRef50_P05343 Nitrogen fixation protein nifU n=7 Tax=Bacteria RepID=NIFU_KLEPN Length = 274 Score = 133 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 60/124 (48%), Positives = 88/124 (70%), Gaps = 5/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61 YSEKV DH+ NPRN DN + G VG+ +CGD ++L ++V+ + IIE+A F+T+ Sbjct: 4 YSEKVKDHFFNPRNARVVDNAN---AVGDVGSLSCGDALRLMLRVDPQSEIIEEAGFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCGSAIASSS +TE + G +L EA I N IA+ L LPP K+HCS++ ++A++AAIA+ Sbjct: 61 GCGSAIASSSALTELIIGHTLAEAGQITNQQIADYLDGLPPEKMHCSVMGQEALRAAIAN 120 Query: 121 YKSK 124 ++ + Sbjct: 121 FRGE 124 >UniRef50_B8I3D6 FeS cluster assembly scaffold protein NifU n=30 Tax=cellular organisms RepID=B8I3D6_CLOCE Length = 153 Score = 133 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEKV+DH+ NPRNVG ++ D G G VG CGD+MK+ +K+ D I+ DA+FKT+ Sbjct: 1 MYSEKVMDHFSNPRNVGEIEDAD---GVGQVGNSKCGDIMKMYLKIEDN-IVVDAKFKTF 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCG+A+A+SS+ TE VKGK+++EA I N +AE L LPP K+HCS LAE+AI AA+ D Sbjct: 57 GCGAAVATSSMATELVKGKTVEEAMNITNKAVAEALDGLPPAKMHCSNLAEEAIAAALTD 116 Query: 121 YKSKRE 126 Y+ + Sbjct: 117 YRKRNG 122 >UniRef50_C7PDA7 Nitrogen-fixing NifU domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDA7_CHIPD Length = 149 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 65/129 (50%), Positives = 97/129 (75%), Gaps = 1/129 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFK 59 MAY+E+V+D+Y NPRN G+ D + VG+G++ P +V+++QI+V+ + +I DARFK Sbjct: 3 MAYAERVLDYYNNPRNAGTLDKSSPQVGTGLIHVPEYIEVVRIQIEVSPKRHVIMDARFK 62 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 T+GCG+AIA++S+ TEW+KGK+++EA + + DI E L LPP KIH +IL EDA+KAAI Sbjct: 63 TFGCGAAIAATSITTEWLKGKTIEEAARLDHMDIVEALSLPPAKIHATILIEDAVKAAIN 122 Query: 120 DYKSKREAK 128 DY+ K + Sbjct: 123 DYRFKNGLE 131 >UniRef50_A1SV02 SUF system FeS assembly protein, NifU family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SV02_PSYIN Length = 153 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 25/145 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +IDH PRN ++ + P CGD + L ++++D II DA F+ Sbjct: 8 LYQEVIIDHGRRPRNSKKLEHPSC---TQEGYNPLCGDRLTLYLRIDDNRII-DASFEGE 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTD---------------------IAEELELP 100 GC ++A+SSL+TE +K ++ EA+ + + + Sbjct: 64 GCAISMAASSLMTERIKNMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGVRDF 123 Query: 101 PVKIHCSILAEDAIKAAIADYKSKR 125 PV+I C+ L A+ A + + +K+ Sbjct: 124 PVRIKCATLPWHALNACLNNINTKQ 148 >UniRef50_A5EYF1 SUF system FeS assembly protein, NifU family n=2 Tax=Bacteria RepID=A5EYF1_DICNV Length = 146 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 22/135 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DH +NPRN + S P CGD +K+ +++N+ G+I D F Sbjct: 7 LYQELILDHSKNPRNFHAL---TPCTHSATGHNPLCGDNLKVFVRLNE-GVIADLSFVGD 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEELELPPVK 103 GC + AS+S++TE GK+L+E Q + + P + Sbjct: 63 GCAISKASASMMTELAMGKTLEEFQKLYDLFHYIATTQNPIPQEVGKLQALAGVRQYPAR 122 Query: 104 IHCSILAEDAIKAAI 118 + C+ LA + AA+ Sbjct: 123 VKCATLAWHTLDAAL 137 >UniRef50_Q74DA8 NifU-like domain protein n=1 Tax=Geobacter sulfurreducens RepID=Q74DA8_GEOSL Length = 131 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 5/127 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS KV DH NPRNVGS ++ + V G P CGD + +++ ++ I+ D +F G Sbjct: 5 YSAKVWDHVRNPRNVGSLEDANVVV---QAGDPTCGDAVLYFLRIEED-IVRDIKFLIKG 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 CG+AIA+SS+ TE V GK LDE + + IA+ L LP K+HCS +A A+ AA+ Y Sbjct: 61 CGAAIATSSVATELVMGKGLDEVMGLSDQIIAQALDGLPEEKMHCSNMAASALHAAVEQY 120 Query: 122 KSKREAK 128 ++ + Sbjct: 121 RATVAGE 127 >UniRef50_A1AQD6 Nitrogen-fixing NifU domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQD6_PELPD Length = 133 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS KV DH+ PRN G ++ + G G +G P CGD +K+ +K+ D+ I++D +F+ G Sbjct: 6 YSPKVFDHFLTPRNNGVLEDAN---GIGEIGDPECGDHLKVYVKIEDD-IVKDIKFQIKG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 C +AIA +S +TE V GK + EA + + I E + LP K+HCS L + A+ DY Sbjct: 62 CPAAIACASAMTELVMGKPVGEAMLVSDDQIIEYIDGLPEFKVHCSALGASGFRVAVMDY 121 Query: 122 KSKRE 126 K + Sbjct: 122 SIKSK 126 >UniRef50_B0R7Y3 Iron-sulfur cluster assembly protein n=5 Tax=Halobacteriaceae RepID=B0R7Y3_HALS3 Length = 142 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 Y ++++DHY NPRN G + P+CGD ++ + ++D+G I F+ Sbjct: 7 MYRQQILDHYRNPRNQGELPEPSF---THEGYNPSCGDELEFDVALDDDGETIAHVAFRG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAI 118 GC + AS+S+++E + G +L E A+ DI + L + P++I C++L+E ++ Sbjct: 64 DGCAISQASASMLSEELPGMTLAEVDALDRDDILDMLGVEVTPMRIKCAVLSEKVVQDGA 123 Query: 119 ADY 121 Y Sbjct: 124 EIY 126 >UniRef50_P20628 Nitrogen fixation protein nifU n=46 Tax=Bacteria RepID=NIFU_ANASP Length = 300 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 55/126 (43%), Positives = 85/126 (67%), Gaps = 5/126 (3%) Query: 3 YSEKVIDHYENPRNVGSFDN---NDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARF 58 Y++KV++ + +P+N G + V +G VG+ ACGD ++L IKV + I D+RF Sbjct: 4 YTDKVLELFYDPKNQGVIEENGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAA 117 +T+GC SAIASSS +TE +KG +LDEA + N DIA+ LP K+HCS++ ++A++AA Sbjct: 64 QTFGCTSAIASSSALTEMIKGLTLDEALKVSNKDIADYLGGLPEAKMHCSVMGQEALEAA 123 Query: 118 IADYKS 123 I +Y+ Sbjct: 124 IYNYRG 129 >UniRef50_B3DY81 NifU-like protein involved in Fe-S cluster formation n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY81_METI4 Length = 164 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 23/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 Y E ++DH +PRN G + P+CGD +++ +K+ +IED F Sbjct: 30 LYQEIILDHSRHPRNFG---KPEGEFREAEGSNPSCGDSVRVFVKIGFPHQLIEDVHFLG 86 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAI-------------KNTDI------AEELELPP 101 GC +AS+SL+TE V+ K ++E + + +N +I + + P Sbjct: 87 RGCAICMASASLMTEVVRQKKVEEIKTLIENFQAFLTGKEKRNAEIPEELFPLKGVRQFP 146 Query: 102 VKIHCSILAEDAIKAAI 118 ++ C++L A++ I Sbjct: 147 ARVKCALLPWHALEKII 163 >UniRef50_B6BSS9 SUF system FeS assembly protein, NifU family n=3 Tax=Candidatus Pelagibacter RepID=B6BSS9_9RICK Length = 154 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 27/143 (18%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +++H +NPRN+G D+ +++ P CGD + + +K+N + I+ED F+ Sbjct: 6 LYQEIILEHGKNPRNLGKTDDFNKD---AKGHNPLCGDNVHVYLKLNGQKIVEDISFEGS 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI------------------------AEEL 97 GC ++AS+S++T+ +KGK+ EA+ I + + Sbjct: 63 GCAISMASASIMTDLIKGKNEHEAKEIVEDFLGMIKENPELKSENLAEDEKTKLMCLSGV 122 Query: 98 ELPPVKIHCSILAEDAIKAAIAD 120 + P+++ C+ L+ + +A + Sbjct: 123 KQYPMRVKCATLSWHTLVSAFEN 145 >UniRef50_C9A1I3 SUF system FeS assembly protein n=2 Tax=Firmicutes RepID=C9A1I3_ENTGA Length = 162 Score = 128 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 23/138 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DH +P + G+ ++ V + P CGDV+ L++ V E I+D F Sbjct: 9 LYRQVILDHSSHPHHRGTLGDSTYKV---ELNNPTCGDVIHLELAVEGE-TIKDVAFTGE 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIK-------------------NTDIAEELELPPV 102 GC + AS+S++ + V GK+L EA + + + + P Sbjct: 65 GCSISTASASMMGDAVIGKTLTEAGELSGLFSELVQGHTVSDSDRLGDASMLGGVAKFPA 124 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ LA A++ AIAD Sbjct: 125 RIKCATLAWKALEKAIAD 142 >UniRef50_B4D357 SUF system FeS assembly protein, NifU family n=4 Tax=Bacteria RepID=B4D357_9BACT Length = 154 Score = 128 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 22/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DH PRNVG + +V P+CGD + L +K +G IED +F Sbjct: 8 LYQQVILDHSRRPRNVGEIADGAVHVH---GDNPSCGDEIHLHVKFGADGGIEDLKFTGQ 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA-------------------QAIKNTDIAEELELPPV 102 GC + AS+SL+T VKGKS +A +++ + + + + P Sbjct: 65 GCAISQASASLMTLKVKGKSRADAGAMLSAFHDLVTTEVSDPPKSLGDLRLLQGVRKFPQ 124 Query: 103 KIHCSILAEDAIKAAIA 119 ++ C++LA A++ A+ Sbjct: 125 RVKCAMLAWRALEQAME 141 >UniRef50_A4J289 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J289_DESRM Length = 163 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 5/122 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 +AYSEK +DH+ NPRNVG +N + G G +G CGDV ++ I V +E I D +F+ Sbjct: 13 LAYSEKTLDHFRNPRNVGVVENYN---GRGKIGEADCGDVCEITILVEEEQ-INDIKFRV 68 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 YGC A+A+SS VTE KGK +EA + + D+ E L LP K HCS+L A+K AI Sbjct: 69 YGCVGAVATSSAVTELAKGKHCEEALKLTDDDVVEFLDGLPDQKKHCSLLGIRALKQAIY 128 Query: 120 DY 121 DY Sbjct: 129 DY 130 >UniRef50_Q2JCF1 SUF system FeS assembly protein n=86 Tax=Actinobacteria (class) RepID=Q2JCF1_FRASC Length = 172 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 25/142 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DHY NP + G D D V P CGD + L++KV+D G++ED +++ Sbjct: 6 MYQEIILDHYRNPLHRGLRDPFDAEVHHV---NPTCGDEVTLRVKVSD-GVVEDVSYESE 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA---------------------EELELP 100 GC + AS+S++++ V GKS+D A ++ +A + Sbjct: 62 GCSISQASASVMSDLVIGKSVDAALKLEREFLALMQSRGTIEGDEDVLEDAVAFAGVSKY 121 Query: 101 PVKIHCSILAEDAIKAAIADYK 122 P ++ C++L+ A K A A Sbjct: 122 PARVKCALLSWMAWKDATAKAM 143 >UniRef50_C1XI12 SUF system FeS assembly protein, NifU family n=2 Tax=Meiothermus RepID=C1XI12_MEIRU Length = 147 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 22/144 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++ HY++P N GS ++ + V + P+CGD ++L ++ + E I D RF+ Sbjct: 7 LYKEIILRHYKSPHNYGSLESANVRV---VGDNPSCGDQIELLVETDGEQ-IADVRFRGQ 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ------------------AIKNTDIAEELELPPVK 103 GC + AS+SL+T+ VKGK+ EA + + + + Sbjct: 63 GCAISQASASLMTDLVKGKTWAEALELERKFKSMILDGTPPSPELGDLAALSGVHKLAAR 122 Query: 104 IHCSILAEDAIKAAIADYKSKREA 127 + C+ LA +A++ A + ++K + Sbjct: 123 VKCATLAWNALEQAAQEARTKAQG 146 >UniRef50_O32163 NifU-like protein n=159 Tax=Bacillales RepID=NIFU_BACSU Length = 147 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 24/138 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DHY+NPRN G ++ + P CGD ++L +K++ + I+EDA+F+ Sbjct: 10 LYRQVIMDHYKNPRNKGVLND----SIVVDMNNPTCGDRIRLTMKLDGD-IVEDAKFEGE 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ-------------------AIKNTDIAEELELPPV 102 GC ++AS+S++T+ +KGK ++ A + + + + + P Sbjct: 65 GCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPA 124 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ L+ A++ +A Sbjct: 125 RIKCATLSWKALEKGVAK 142 >UniRef50_B4SCB5 Nitrogen-fixing NifU domain protein n=11 Tax=Bacteria RepID=B4SCB5_PELPB Length = 203 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 2/129 (1%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 AYS+K+ +H+ NP+N+ +N D+ G GM G CGD M + IKV+ ++ I D ++KT Sbjct: 8 AYSDKLKEHFMNPKNILQGENTDDFDGVGMEGNLQCGDQMMVVIKVDKEKETITDCQWKT 67 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 YGC SAIAS+S+++E VKG++LD A I ++A E LP KIHCS+L + A+++AI Sbjct: 68 YGCASAIASTSVLSEMVKGRTLDAAFHISPKEVALELGGLPDHKIHCSVLGDKALRSAIN 127 Query: 120 DYKSKREAK 128 +Y ++ + Sbjct: 128 NYYTRNGQE 136 >UniRef50_Q2JUE7 SUF system FeS assembly protein, NifU family n=6 Tax=Cyanobacteria RepID=Q2JUE7_SYNJA Length = 162 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 22/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKT 60 Y + +++ Y PRN G D P+CGD + L ++++ + I D +F+ Sbjct: 9 LYQQVILERYRKPRNFGRV---DPVHRRQRGHNPSCGDTIDLTLQLDPGQERIADIKFEG 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTD------------------IAEELELPPV 102 GC A+AS+ L+ + V+G+++ EA + + + PV Sbjct: 66 EGCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREYRSLNAMKGVAQFPV 125 Query: 103 KIHCSILAEDAIKAAIA 119 +I C+ LA A+K A+ Sbjct: 126 RIKCANLAWHALKHALE 142 >UniRef50_A6LUJ3 SUF system FeS assembly protein, NifU family n=5 Tax=Bacteria RepID=A6LUJ3_CLOB8 Length = 141 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +++H + N + DN D P+CGD + L++K+N G+IED F G Sbjct: 7 YTELIMEHSTSKHNKRNLDNPDI---KEKGHNPSCGDEITLELKLN-NGVIEDLAFTGQG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+S++ + +KGK+++EA + T I + + P Sbjct: 63 CAISQASTSIMIDLIKGKNIEEALKLTETFIGMIKREIKDDEELYALEDAMAFKNISNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA +K A+ Sbjct: 123 ARVKCAVLAWHTLKEALEK 141 >UniRef50_Q39WZ1 Fe-S cluster assembly protein NifU n=33 Tax=cellular organisms RepID=Q39WZ1_GEOMG Length = 286 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 5/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTY 61 Y+EKV +H+ NPRNVG + D G VG+ ACGD +KL IK++D I DA+F+T+ Sbjct: 4 YTEKVREHFLNPRNVGDIPDAD---AVGEVGSLACGDALKLYIKLDDAKERIVDAKFQTF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIAD 120 GC SAIASSS +TE +KGK+LDEA A N +IA+ LP K+HCS++ ++A++ AIA Sbjct: 61 GCASAIASSSALTEIIKGKTLDEALATTNQEIADFLGGLPEEKMHCSVMGQEALEVAIAK 120 Query: 121 YKS 123 Y+ Sbjct: 121 YRG 123 >UniRef50_C7NMT9 SUF system FeS assembly protein, NifU family n=7 Tax=Halobacteriaceae RepID=C7NMT9_HALUD Length = 163 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 72/123 (58%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 Y ++++DHY+NPRN G + + + P CGD +++ + ++D+ IE F+ Sbjct: 25 MYRQQILDHYKNPRNYGEIEGATF---THVGENPMCGDTIEMDVVLDDDEETIEAVAFQG 81 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE--ELELPPVKIHCSILAEDAIKAAI 118 GC + AS+S+++E ++G +++E +A+ D+ + +++ P+++ C++LAE + Sbjct: 82 DGCAISQASASMLSERLEGMTIEELEALDRDDVIDMLGVDISPMRVKCAVLAEKVAQDGA 141 Query: 119 ADY 121 Y Sbjct: 142 EIY 144 >UniRef50_Q0F1C8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1C8_9PROT Length = 151 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 24/140 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DH ++PRN G + + P CGD + + + V+D+GIIED F+ Sbjct: 7 LYQQVIVDHNKSPRNFGKLASFN---HEADGYNPLCGDKLHIYLNVSDDGIIEDVSFEGE 63 Query: 62 GCGSAIASSSLVTEWVKG------------------KSLDEAQA---IKNTDIAEELELP 100 GC ++AS+SL+T+ +KG +DE + + + Sbjct: 64 GCAISVASASLMTDALKGTELAAFQQRFEGFQHMVTADIDEEPDTDVLGKLAVLSGVREF 123 Query: 101 PVKIHCSILAEDAIKAAIAD 120 P +I C+ L +KAAI D Sbjct: 124 PSRIKCASLCWHTMKAAIED 143 >UniRef50_B3E6H1 Nitrogen-fixing NifU domain protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E6H1_GEOLS Length = 153 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 5/128 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+ V+DH NPRNVG D+ + V VG P CGD + L +++ D+G + F Sbjct: 7 QYTGTVLDHARNPRNVGGMDDANVVV---QVGDPECGDTLLLFMRI-DDGCVAKVSFLIK 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIAD 120 GCG+AIA++S+ TE VKGKSL+EA + + + A LP K HCS L A+ AAIA Sbjct: 63 GCGAAIATASMGTELVKGKSLNEALLVTDATVTAALGGLPEDKEHCSNLIASAVHAAIAQ 122 Query: 121 YKSKREAK 128 Y S + Sbjct: 123 YTSTLTGE 130 >UniRef50_B6J805 IscU n=24 Tax=Bacteria RepID=B6J805_COXB1 Length = 158 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 22/135 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +IDH NPR+ G + + P CGD + + + G+I DARF+ Sbjct: 17 LYHQLIIDHGRNPRHFGRLEMP---THTHEGYNPLCGDRLTVFFQ-EKNGVITDARFEGS 72 Query: 62 GCGSAIASSSLVTEWVKGKSLD------------------EAQAIKNTDIAEELELPPVK 103 GC ++AS+SL+ E +KGKS+ EA + + + P + Sbjct: 73 GCAISMASASLMMEALKGKSIQAAEILFSQFHDLVTGTKREAAQLGKLAVLAGVAEYPAR 132 Query: 104 IHCSILAEDAIKAAI 118 + C+ L AA+ Sbjct: 133 VKCATLCWHTALAAL 147 >UniRef50_B3T2T4 Putative NifU-like N terminal domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93H17 RepID=B3T2T4_9ARCH Length = 149 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 10/125 (8%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +I++ NP N G +N + P CGD + L + V+ I + +F G Sbjct: 7 YTEMIIEYSRNPSNFGKIENPHIHRHDS---NPLCGDSIDLYVNVDGNK-ITEVKFDGKG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELEL------PPVKIHCSILAEDAIKA 116 C +A +S++TE +KGK+L+E + K D+ EL L PV+I C++L+ A+K Sbjct: 63 CAICMACTSVLTEMIKGKNLEEVKNFKKDDLLSELGLGHLIKTSPVRIKCALLSLKALKY 122 Query: 117 AIADY 121 I Y Sbjct: 123 GIYSY 127 >UniRef50_A5FQV7 Nitrogen-fixing NifU domain protein n=5 Tax=Dehalococcoides RepID=A5FQV7_DEHSB Length = 127 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 5/128 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y EKV++++ NP N G +N D G G G CG+V + I+V D ++E +FKTY Sbjct: 3 LYFEKVMEYFVNPLNSGEMENPD---GIGRAGNAVCGEVTEFYIRVKDNRLVE-VKFKTY 58 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCG+A+A SSLV+ GK+++EA I N + E+ LP + HCS + A+ +AIAD Sbjct: 59 GCGAAVAISSLVSLMATGKTIEEAMKIDNKAVEAEIKGLPQNRNHCSQMGPQALHSAIAD 118 Query: 121 YKSKREAK 128 YK K +A+ Sbjct: 119 YKIKVQAR 126 >UniRef50_B2GCP7 Nitrogen fixation protein n=69 Tax=Bacilli RepID=B2GCP7_LACF3 Length = 156 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 24/138 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DH ++P N G+ + + + P CGD + LQ+KV +G+I++ + + Sbjct: 9 LYREVILDHADHPHNKGALKDATNAI---TLNNPTCGDEIDLQVKVGSDGLIDEIGYTGH 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ---------------------AIKNTDIAEELELP 100 GC + AS+S++TE VKGK DEA A+ + + + Sbjct: 66 GCTISQASASMMTEAVKGKRPDEALAMAKIFSDMAIGKDHDQADLQALGDAQVLTSIMEF 125 Query: 101 PVKIHCSILAEDAIKAAI 118 P +I C+ LA A++ A+ Sbjct: 126 PARIKCATLAWWALQRAL 143 >UniRef50_Q1AZN5 SUF system FeS assembly protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZN5_RUBXD Length = 140 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 21/136 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DHY PRN G ++ D + P CGD + + + + + +A F Sbjct: 5 LYGQVIMDHYRRPRNRGELEDADLTRH---LLNPLCGDEVTVYARFEGDR-VAEASFTGR 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI-----------------KNTDIAEELELPPVKI 104 GC + AS+S++TE ++GKS +EA+A + + + P +I Sbjct: 61 GCSISQASASMMTERLRGKSREEAEAEISRFKRMMTGEEEFPEGDDLAALKGVIQYPSRI 120 Query: 105 HCSILAEDAIKAAIAD 120 C+ LA +A + + + Sbjct: 121 RCATLAWEAFQQGLEE 136 >UniRef50_B0K2I6 SUF system FeS assembly protein, NifU family n=10 Tax=Thermoanaerobacter RepID=B0K2I6_THEPX Length = 137 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 22/135 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSE +++HYEN + + P CGD + L +K+N + IIEDA F + Sbjct: 7 LYSEVIMEHYENSPHEKELKDA---THKERGYNPLCGDNITLYLKMNGD-IIEDASFTGH 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ------------------AIKNTDIAEELELPPVK 103 GC + AS+S++ + +KGK EA + + + + + P + Sbjct: 63 GCAISQASTSMMIDLIKGKDKKEALRLVQQFIDMMHKKDVNLDELGDAQVLQGVSDFPAR 122 Query: 104 IHCSILAEDAIKAAI 118 + C++LA ++ + Sbjct: 123 VKCALLAWKTLQEIL 137 >UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=MNMA_RUBXD Length = 488 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +VI+H NPRN G G G G ACGD ++ ++V + +++ R++ YG Sbjct: 5 YGPRVIEHLVNPRNAGEVGGPS---GVGEAGNAACGDQVRFTLRVGGDLRLQEVRYRAYG 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE--LPPVKIHCSILAEDAIKAAIAD 120 C + IA+ S + E +G+S+ A I DI E L LPP K H + LA DA+ A D Sbjct: 62 CAACIAAGSALAELAEGRSITGAAQISRGDIQEALGGPLPPGKEHGATLALDALHRAFED 121 Query: 121 YKSKR 125 Y S++ Sbjct: 122 YWSRQ 126 >UniRef50_A7NG60 SUF system FeS assembly protein, NifU family n=2 Tax=Roseiflexus RepID=A7NG60_ROSCS Length = 134 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 +++DHYE+PRN GS + D G+ P CGDV+ + +K++ + F+ GC Sbjct: 9 RLLDHYEHPRNRGSLPDADVTQTGGI---PDCGDVVTVYLKIDPPDRVVAISFEGQGCTI 65 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV--KIHCSILAEDAIKAAIADYKS 123 + A++S+++E V G + E +AI ++ + L V + C+ LA +KAAIA Y+ Sbjct: 66 SQAAASILSERVIGSTFAEIEAITLDEMIDFLGREAVQTRPRCATLALRTLKAAIAAYRR 125 >UniRef50_D1JBD9 Putative NifU-like protein n=2 Tax=uncultured archaeon RepID=D1JBD9_9ARCH Length = 141 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 6/124 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSE+ ++ NP+NVG ++ D G G + P CGD M++ +K+ D I+ D +F + Sbjct: 23 LYSERTLEEAYNPKNVGVLEDPD---GCGRITGP-CGDTMQIHLKIADAKIV-DCKFISD 77 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GCG + AS S VTE KGK++++A I I L LP IHC +LA + ++AAI D Sbjct: 78 GCGPSTASGSAVTEMAKGKTIEDALMIDANAILAVLDGLPEESIHCPVLAVNTLRAAIED 137 Query: 121 YKSK 124 YK+K Sbjct: 138 YKNK 141 >UniRef50_C1I2Y9 SUF system FeS assembly protein n=2 Tax=Clostridiales RepID=C1I2Y9_9CLOT Length = 143 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E +++H + N DN D S P+CGD + L++K+N + IIED F G Sbjct: 7 YTELIMEHSTSRHNRRKLDNPDL---SEKGHNPSCGDEITLELKMNGD-IIEDLAFTGQG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+S++ + +KGK +EA + T I + + P Sbjct: 63 CAISQASTSMMIDLIKGKDKEEALKLVETFIGMIKREINDEDELEDLEDAIVLKNISNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA +K A + Sbjct: 123 ARVKCAVLAWHTLKEAFGE 141 >UniRef50_A7H8S0 SUF system FeS assembly protein, NifU family n=3 Tax=Bacteria RepID=A7H8S0_ANADF Length = 149 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 24/138 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E V+DH + PRN G + P CGD + + ++ G++ D RF+ Sbjct: 7 LYQEVVLDHGKRPRNYGPLEGA---THRAEGLNPLCGDRITVAARLEG-GVVRDVRFEGS 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDE--------------------AQAIKNTDIAEELELPP 101 GC + AS+S++T KG++ E A + + + P Sbjct: 63 GCAISKASASVMTGVAKGRTPAEIDAVFERFHRLVTEGPGAVDAGQLGKLAVFGGVHEYP 122 Query: 102 VKIHCSILAEDAIKAAIA 119 ++ C+ LA A++ A+ Sbjct: 123 TRVKCASLAWHALRQALR 140 >UniRef50_Q1WR14 IscU protein n=10 Tax=Lactobacillus RepID=Q1WR14_LACS1 Length = 149 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 23/142 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +++ +PR+ G +N V + P CGDV+ L + D I+D F Y Sbjct: 7 LYRQAILEEANHPRHKGKLENESVEV---ELRNPTCGDVITLTALIEDNK-IKDIAFDGY 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQA-------------------IKNTDIAEELELPPV 102 GC + +S+S++T V K D + + I E ++ P Sbjct: 63 GCTISQSSASIMTNEVLNKDFDTIKNMVLSFSDMITKEVKPDRKVLGEAIILEGVKQFPA 122 Query: 103 KIHCSILAEDAIKAAIADYKSK 124 +I C++L+ AI I Y+ K Sbjct: 123 RIKCAMLSWKAIYQLIEKYEGK 144 >UniRef50_Q04QC7 NifU related protein associated with Fe-S cluster formation n=4 Tax=Leptospira RepID=Q04QC7_LEPBJ Length = 144 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 24/142 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DHY+NPR G + D S P CGD ++L I + + I D R Sbjct: 7 LYKEVILDHYQNPRFRGKLEPADL---SEHGINPLCGDELELTINLEGDK-IADVRVTGK 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA--------------------QAIKNTDIAEELELPP 101 GC + AS S++ E ++GK++ EA + +++ + E ++ P Sbjct: 63 GCSISQASGSMMAESIRGKTVLEAEHILSRFKSMFLENRDPQFEKELEDLESMESVKKIP 122 Query: 102 VKIHCSILAEDAIKAAIADYKS 123 +I C++L + ++ A++ + Sbjct: 123 ARIKCAVLPWNTLERALSRIEK 144 >UniRef50_C5CEE1 SUF system FeS assembly protein, NifU family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEE1_KOSOT Length = 146 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 22/145 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSE ++ HY+N G ++ + +CGD + + +K ND IE F + Sbjct: 6 LYSEFILYHYKNSPYKGVLEDATND---EEGKNLSCGDQIHVYVKFNDNK-IETISFDGH 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEELELPPVK 103 GC ++AS+S++ E + GKS++EA+ I + I + ++ P++ Sbjct: 62 GCAISMASASIMAETLSGKSVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPMR 121 Query: 104 IHCSILAEDAIKAAIADYKSKREAK 128 + C+ LA ++ I + + K+ + Sbjct: 122 VKCASLAWRTLERIIDEREQKKAGE 146 >UniRef50_A0QX03 SUF system FeS assembly protein, NifU family protein n=20 Tax=Actinomycetales RepID=A0QX03_MYCS2 Length = 164 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 25/143 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKT 60 Y E ++DHY++P + G + V P CGD + L++ ++D+G +ED + Sbjct: 6 MYQEVILDHYKHPHHRGLREPFGAEVHHV---NPTCGDEVTLRVTLSDDGESVEDVSYDG 62 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQA---------------------IKNTDIAEELEL 99 GC + A++S++T+ V G+S+ +A I + + Sbjct: 63 QGCSISQAATSVLTDQVIGQSVGDALKTVDAFTEMVSSRGTVEGDEDVIGDGIAFAGVAK 122 Query: 100 PPVKIHCSILAEDAIKAAIADYK 122 P ++ C++L A KAA+A+ + Sbjct: 123 YPARVKCALLGWMAFKAAVAEAR 145 >UniRef50_C7DI52 SUF system FeS assembly protein, NifU family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI52_9EURY Length = 124 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+E++I +YE+P N G DN D + P CGD + + IKV+D +++ +F+ Sbjct: 5 LYAEELISNYEHPHNKGKIDNPDAEMHE---YNPVCGDDITIYIKVSDNK-VKEVKFEGQ 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAIA 119 GC ++ ++S++TE +KGKSL E A+ DI E + + P ++ C+ ++ A++ A+ Sbjct: 61 GCAISMGTASMLTESIKGKSLSEISAMGFKDIVELIGVDPGPARLKCATISLKALQKAVQ 120 Query: 120 DYK 122 K Sbjct: 121 KIK 123 >UniRef50_Q03A02 Fe-S cluster formation protein, NifU-like n=8 Tax=Lactobacillus RepID=Q03A02_LACC3 Length = 148 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 23/131 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++D ++PR+ G D V P+CGDV+ LQIK D G + D F Sbjct: 9 MYRAVILDEAQHPRHHGVLPAFD---HEITVRNPSCGDVLHLQIK-EDAGRVTDVAFSGS 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQA-------------------IKNTDIAEELELPPV 102 GC + AS+SL+TE + GK+ + + + + + + + P Sbjct: 65 GCTISQASASLMTEQIIGKTPADIEQMVEAFSDLIINGDVPNADILGDAAVLKGVHQFPA 124 Query: 103 KIHCSILAEDA 113 +I C+ LA A Sbjct: 125 RIKCATLAWKA 135 >UniRef50_A9NHI3 SUF system FeS cluster assembly protein n=10 Tax=Bacteria RepID=A9NHI3_ACHLI Length = 148 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 22/146 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++DHY+NP+N G ND++ + + P CGD + +Q+ + D II D + + Sbjct: 6 LYRSVIMDHYKNPKNKGLI--NDDSYLTVHLNNPTCGDDLIVQLLIKDSKII-DLKQQGK 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI-------------------KNTDIAEELELPPV 102 GC AS+S+ +E +K K + EA+ + ++ E + P Sbjct: 63 GCSICCASASVASELLKNKDIFEAKELIQTFYDMLTGEEIKDKSVLEDALAFEGVGQFPA 122 Query: 103 KIHCSILAEDAIKAAIADYKSKREAK 128 +I C+ LA A + + + ++ + Sbjct: 123 RIKCATLAWKAYEKGLNPLEGEQNNE 148 >UniRef50_C7M3C8 SUF system FeS assembly protein, NifU family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M3C8_ACIFD Length = 153 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 27/147 (18%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DHY++PRN G D+ D P CGD +KL I V + + D R + Sbjct: 7 LYREIILDHYKHPRNQGVLDDPDAI--REEGFNPLCGDEIKLSILVKGDRL-ADIRVDGH 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA------------------------QAIKNTDIAEEL 97 GC + +S+SL++E VKGK L E + + + + Sbjct: 64 GCSISRSSASLMSEAVKGKDLAEVDRIIERFKAMVVGGEGAAEGLDSLRTLGELAALQGV 123 Query: 98 ELPPVKIHCSILAEDAIKAAIADYKSK 124 PV++ C+ L ++++ A+A +++ Sbjct: 124 VKFPVRVKCATLPWNSLQNALATARAR 150 >UniRef50_Q02X70 NifU-like protein for Fe-S cluster formation n=29 Tax=Bacilli RepID=Q02X70_LACLS Length = 152 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++DH NPR+ G + P CGDV++L ++ + +I + F + Sbjct: 9 LYRAVILDHSSNPRHAGEL----HTGCMIDLNNPTCGDVIRLTVEFEGD-VISNIAFSGH 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ-------------------AIKNTDIAEELELPPV 102 GC + AS+S++T V GK+ +EA+ A+ + + P Sbjct: 64 GCTISTASASMMTVAVLGKTKEEAKELATIFSAMVTGETDERQEALGDAQFLAGVSKFPA 123 Query: 103 KIHCSILAEDAIKAAIA 119 ++ CS LA +A+K AI Sbjct: 124 RVKCSTLAWNALKKAID 140 >UniRef50_Q1DD56 SUF system FeS assembly protein, NifU family n=2 Tax=Bacteria RepID=Q1DD56_MYXXD Length = 152 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 24/138 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E V++H + PRN + P CGD + + +KV G+I+D F+ Sbjct: 10 LYQEVVLEHSKRPRNYRVVEGA---TAEAAGHNPLCGDQLVVTLKVEG-GVIKDVAFQGQ 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--------------------DIAEELELPP 101 GC + AS+SL+T VK ++ EA+ + + + P Sbjct: 66 GCAISKASASLMTGAVKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSGVSEFP 125 Query: 102 VKIHCSILAEDAIKAAIA 119 ++ C+ LA ++AA+ Sbjct: 126 ARVKCASLAWHTLRAALE 143 >UniRef50_D2QWB8 SUF system FeS assembly protein, NifU family n=2 Tax=Planctomycetaceae RepID=D2QWB8_9PLAN Length = 129 Score = 118 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+DHYE+P + G + P CGDV+ +++K+++ +++A F G Sbjct: 10 YQDHVMDHYEDPYHHGHCIDA---THMHEDDNPLCGDVIHVELKIDENQKVKEAWFSGDG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE--LPPVKIHCSILAEDAIKAAI 118 C + AS+S++ E ++G S+DE +A+ + E L P + C +L+ ++ A+ Sbjct: 67 CCISQASASMLMEKIEGLSVDEVKAMSANQMLELFGARLTPNRQKCCLLSWRVVQQAV 124 >UniRef50_A9BJG9 SUF system FeS assembly protein, NifU family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJG9_PETMO Length = 145 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 23/136 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS+ ++D+ +N R N +CGD + L +KV D II++ F + Sbjct: 11 LYSDIILDYAKNERYKKEIQNA----KKAEGKNLSCGDEITLYLKVEDN-IIKEITFTGH 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT------------------DIAEELELPPVK 103 GC + AS+S++ E+++GK++DEA I +I ++ P++ Sbjct: 66 GCIISQASASMMCEYLEGKTVDEANKIFQEIIKMSQGKEFDKELVDGIEIFSDISKFPMR 125 Query: 104 IHCSILAEDAIKAAIA 119 C LA + A+ Sbjct: 126 TKCFTLAWHTLDDALN 141 >UniRef50_Q1JIL3 IscU protein n=65 Tax=Bacilli RepID=Q1JIL3_STRPD Length = 159 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 24/137 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y V DH + P + G D V + + P CGDV+ L +K +++ IED F Sbjct: 9 LYMAVVADHSKRPHHHGQLDG----VEAVQLNNPTCGDVISLTVKFDEDK-IEDIAFAGN 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA-------------------QAIKNTDIAEELELPPV 102 GC + ASSS++T+ V GKS +EA + + ++ + P Sbjct: 64 GCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQ 123 Query: 103 KIHCSILAEDAIKAAIA 119 +I CS LA +A+K AI Sbjct: 124 RIKCSTLAWNALKEAIK 140 >UniRef50_A8YU52 NifU-like protein n=4 Tax=Lactobacillus RepID=A8YU52_LACH4 Length = 153 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 24/138 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++++ NP+N GS + D V +CGD + L + +ND+ I +F Sbjct: 9 LYREVILENANNPQNHGSLADADYQT---TVYNSSCGDKLNLFLNLNDQNEISAIKFNGE 65 Query: 62 GCGSAIASSSLVTEWVKGK---------------------SLDEAQAIKNTDIAEELELP 100 GC + AS+SL+T+ VKGK S DE + + I + + Sbjct: 66 GCTISQASASLMTQVVKGKNKGEAIEIAKIFSKMAMGKDCSKDEIAKLGDAQIMTNIMMF 125 Query: 101 PVKIHCSILAEDAIKAAI 118 P +I C+ LA A++ + Sbjct: 126 PARIKCATLAWWALERIL 143 >UniRef50_Q4UGE0 RNaseP-like protein with Nifu domain, putative n=1 Tax=Theileria annulata RepID=Q4UGE0_THEAN Length = 261 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 63/91 (69%), Positives = 75/91 (82%), Gaps = 1/91 (1%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS +V DH+ NPRNVGSFD +D +VG+ +VG ACGDV+KLQ+K+ DE +IEDA FKT+G Sbjct: 154 YSPEVNDHFNNPRNVGSFDKDDPSVGTAIVGKAACGDVIKLQVKIKDE-VIEDACFKTFG 212 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI 93 CGSAIASSS VTE VKGK+ EA AIKNTDI Sbjct: 213 CGSAIASSSYVTEMVKGKTCKEALAIKNTDI 243 >UniRef50_Q9X192 NifU-like protein n=8 Tax=Thermotogaceae RepID=NIFU_THEMA Length = 142 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 22/138 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YSE ++D+ + + G D+ +CGD + L +KV D G+++DA+F+ Sbjct: 5 MMYSEAILDYANSKKFRGKLDDATV---IEEGKNISCGDEITLYLKVED-GVVKDAKFEG 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTD------------------IAEELELPPV 102 GC + AS+SL+ E + G+ ++E ++ + +++ P Sbjct: 61 MGCVISQASASLMLERIIGERVEEIFSLIEEAEKMSRGENFDEGKLKNVTLMSDIKNYPA 120 Query: 103 KIHCSILAEDAIKAAIAD 120 ++ C ILA +K A+ Sbjct: 121 RVKCFILAWKTLKEALKK 138 >UniRef50_A9W9Z0 Nitrogen-fixing NifU domain protein n=3 Tax=Chloroflexus RepID=A9W9Z0_CHLAA Length = 130 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 6/117 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E+++DHY PR+ G + G G P CGD + + ++V G + D +F GC Sbjct: 12 ERLLDHYRQPRHYGELPDAITYSG----GVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCS 67 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE--LPPVKIHCSILAEDAIKAAIA 119 ++ ++S++ E ++G ++ + A+ T + + + + HC+ L +KAA Sbjct: 68 VSVGTASILIEQLQGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAAAR 124 >UniRef50_A1AQB7 Nitrogen-fixing NifU domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQB7_PELPD Length = 156 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 5/125 (4%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 E +DH NPRNVG ++ + G P C D + +++ ++ ++ + +F GC Sbjct: 4 ETFLDHARNPRNVGLLEDANV---VIQAGDPECSDKLIFFVRIEED-LVRNIKFLIEGCE 59 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADYKS 123 + +A+SS +T V G+SLD A+ DIA L LP K+HC +A A+ AA+ Y++ Sbjct: 60 TTVATSSALTGLVMGQSLDVVLALDTEDIAAVLDGLPVEKMHCPTMAISALHAAVRLYRA 119 Query: 124 KREAK 128 + Sbjct: 120 TPRGE 124 >UniRef50_O09257 NifU n=13 Tax=Bacteria RepID=O09257_CYAP8 Length = 294 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 87/125 (69%), Gaps = 4/125 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVG--SGMVGAPACGDVMKLQIKVNDE-GIIEDARFK 59 Y++KV++ + NPRN G+ E +G VG+ ACGD K+ +K+++ II DARF+ Sbjct: 4 YTDKVMEFFYNPRNQGTITEKQEGQAITTGEVGSIACGDSPKIHLKIDEATQIILDARFQ 63 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAI 118 T+GC SAIASSS +TE + GK+LDEA ++ N +IAE LP K+HCS++ ++A++AAI Sbjct: 64 TFGCASAIASSSALTELLVGKTLDEALSLTNREIAEFLGGLPEEKMHCSVMGQEALEAAI 123 Query: 119 ADYKS 123 +Y+ Sbjct: 124 FNYRG 128 >UniRef50_Q0AAQ4 SUF system FeS assembly protein, NifU family n=5 Tax=Proteobacteria RepID=Q0AAQ4_ALHEH Length = 171 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 22/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + V+ H PRN + P CGD +++ +++++ G + A F Sbjct: 30 LYRKIVLAHNRQPRNHHPLE---PCSHHAEGYNPVCGDHIQVYLRLDEAGRVAAASFTGE 86 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAI-------------------KNTDIAEELELPPV 102 C ASSS++TE V G E A+ + + P Sbjct: 87 ACAICTASSSMMTEVVAGLDASEVAALFRRFEAMLTEDPAQGESLPGELPVLAGVRHFPG 146 Query: 103 KIHCSILAEDAIKAAIA 119 + C+ L+ + AA+ Sbjct: 147 RTKCATLSWHTLLAALE 163 >UniRef50_Q3JQE2 SUF system FeS assembly protein, NifU family n=32 Tax=Burkholderiales RepID=Q3JQE2_BURP1 Length = 163 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 23/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E +++H PR G P CGD +K+Q+++ G I D RF + Sbjct: 17 LYQELIVEHKRAPRRFGKLAEP---THEARGHNPQCGDDLKVQLRIEG-GRIGDIRFDGH 72 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-------------------LELPPV 102 GC IAS+S++TE V G+ +D A+A++ A + P Sbjct: 73 GCAICIASASMMTEAVIGRDVDAARALQQRFCAVLTGQAEHDEAYLGKLSSLVAVRRYPS 132 Query: 103 KIHCSILAEDAIKAAIA 119 +I C++L A+ A+ Sbjct: 133 RIKCALLGWHALAHALD 149 >UniRef50_B0S0D2 Iron-sulfur cofactor synthesis protein NifU homolog n=20 Tax=Clostridia RepID=B0S0D2_FINM2 Length = 151 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 25/144 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+E +++ + N ++ + P+CGD + LQ+KV D+ IED + Sbjct: 6 LYTELILEKSRDKSNRRELEHP---THCELGHNPSCGDEITLQLKVQDD-TIEDIAYTGM 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELP 100 GC + AS+S++ + +KGKS++EA + N I + + Sbjct: 62 GCAISQASTSIMCDVIKGKSVNEAIDLCNKFISMIKGEITDRKELKVLKDAVCFQSISTL 121 Query: 101 PVKIHCSILAEDAIKAAIADYKSK 124 P ++ C++L+ +K + + KS+ Sbjct: 122 PARVKCAVLSWYTLKDMLENDKSE 145 >UniRef50_C1ZK76 Iron-sulfur cluster biosynthesis protein, NifU-like protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK76_PLALI Length = 142 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 6/119 (5%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DH+E+P + G + P CGD +KL++K++ IE+A F+ Sbjct: 8 LYDDYILDHFESPYHCGKLECPSCAHAD---KNPLCGDQIKLELKLDGS-TIEEAWFQGR 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAI 118 GC + A +S++ E ++GK+L+E + ++ D+ + L++P + C +LA +K + Sbjct: 64 GCAISQAGASILCEHIEGKTLEELRDMQGQDMLDLLKVPLTASRQKCGLLAFRVLKTLV 122 >UniRef50_B9L9A8 NifU family protein n=6 Tax=Epsilonproteobacteria RepID=B9L9A8_NAUPA Length = 321 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 13/140 (9%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDEN-----VGSGMVGAPACGDVMKLQIKVNDE-GIIED 55 YS KVID NP+ +G F D + G+ ACGD ++L V+ + I D Sbjct: 14 QYSNKVIDRMNNPKYLGEFTEEDAKKRGLKLVVADFGSEACGDAVRLYWLVDPKTDKIVD 73 Query: 56 ARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-------LPPVKIHCSI 108 ARFK++GCG+AIASS ++TE GK++DEA I N D+ + L PP K+HCS+ Sbjct: 74 ARFKSFGCGTAIASSDMMTELTIGKTVDEAMKITNLDVEKALRDDPNTPAFPPQKMHCSV 133 Query: 109 LAEDAIKAAIADYKSKREAK 128 +A D I A A YK K + Sbjct: 134 MAYDVIIEAAAKYKGKNADE 153 >UniRef50_Q1ATZ0 SUF system FeS assembly protein n=2 Tax=Bacteria RepID=Q1ATZ0_RUBXD Length = 161 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 8/127 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIK-VNDEGIIEDARFKTYGC 63 + ++DHYE PR+ G + D + G P CGDV+ + +K +D IED ++ GC Sbjct: 8 QILLDHYERPRHRGRLEEADVRMP---GGNPGCGDVVTIHLKGADDHRHIEDVTYEGEGC 64 Query: 64 GSAIASSSLVTEWV--KGKSLDEAQAIKNTDIAEELE--LPPVKIHCSILAEDAIKAAIA 119 ++A++S++ E V + ++DE + ++ ++L + + C+ L +KAAI Sbjct: 65 TISMAAASMILEEVHERNLTMDEVLRMDYNEMIDKLGRQIVASRPKCATLGLGTLKAAIR 124 Query: 120 DYKSKRE 126 Y+ R Sbjct: 125 KYQKDRR 131 >UniRef50_B9XEV1 Nitrogen-fixing NifU domain protein n=2 Tax=Verrucomicrobia RepID=B9XEV1_9BACT Length = 167 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 77/119 (64%), Gaps = 7/119 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE---GIIEDARFKTY 61 +++ + NP+N+G N D G VG CG++++L +K D+ +I+ A F+++ Sbjct: 7 KRIREAMLNPQNMGELANADS---VGTVGNSDCGEMLRLWVKFKDDNGRKVIDKATFQSF 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIA 119 GC +AIA +SL TE ++GK+ +EA A+K D+A E LPP+KIHC+ L E A+++A+ Sbjct: 64 GCETAIAVASLATELIRGKTAEEALALKTEDLAGELGPLPPMKIHCAQLVEGALRSALE 122 >UniRef50_Q3A8K8 NifU-like protein n=3 Tax=Desulfuromonadales RepID=Q3A8K8_PELCD Length = 143 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 5/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS++V++H+ PRNVG DN + G P CGD + + + + ++ +I D ++K Sbjct: 1 MYSKQVMEHFTRPRNVGYIDNPSVAI---QYGDPTCGDCLLVFLLIEED-VIRDMKYKVL 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIAD 120 GC +AIA++S+ +E G++L++A + ++A LPP K+HCS LA A+KAA+ Sbjct: 57 GCAAAIATASITSEMAIGRTLEQAMELTEKEVAVALGGLPPQKMHCSNLAVGALKAALRV 116 Query: 121 YKS 123 Y + Sbjct: 117 YLA 119 >UniRef50_UPI0001746083 putative FeS assembly protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746083 Length = 166 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 7/119 (5%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKV---NDEGIIEDARFKTY 61 E + D NP+NVG + D G VG+P CGD++++ IK + + +I+ A F+++ Sbjct: 4 EVLQDALANPQNVGEIPDAD---AVGTVGSPDCGDMVRMWIKYKEQDGKKVIDKATFQSF 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIA 119 GC +AIA +SL T+ +KGK+ +EA + ++++ LPP+KIHC + E A+KAA+ Sbjct: 61 GCQTAIAVASLATQLIKGKTREEALDLSAEELSKPLGPLPPMKIHCGQMVEGALKAALE 119 >UniRef50_B9L0V2 NifU family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0V2_THERP Length = 144 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGC 63 E + DH NPR+ G ++ + G P CGDV+ + +K+ +G IED F GC Sbjct: 7 ELLRDHVRNPRHHGPLEDATIVL---EGGNPECGDVVTVYLKIAPDGETIEDVHFTGQGC 63 Query: 64 GSAIASSSLVTEWV-KGK-SLDEAQAIKNTDIAEELELPPV--KIHCSILAEDAIKAAIA 119 G + A++SL+ E + +G ++ A+ + + + + + C+ LA +KAAI Sbjct: 64 GVSQAAASLLMERLHQGHWTIGRIAAVDFSLVQDLVGPEAARSRPRCASLALSVLKAAIQ 123 Query: 120 DYKSKRE 126 Y+ +R Sbjct: 124 KYERERR 130 >UniRef50_D1JAT5 NifU-like protein n=2 Tax=uncultured archaeon RepID=D1JAT5_9ARCH Length = 129 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 6/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YSEK I++Y N NVG + + + CGD M++ + V D G I++A+F+ Sbjct: 12 GYSEKAIEYYLNKVNVGELSDANSQA----IYTGPCGDTMEIFLNVED-GEIKEAKFQAI 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIAD 120 GC A +S S +TE + GK+L+EA+ I TDI +P K+HC+ L + ++ AI Sbjct: 67 GCAGAFSSGSALTEMIIGKTLEEAEKIDETDIMAYLGGIPAQKLHCACLCKRTLRKAIDA 126 Query: 121 YKS 123 YK Sbjct: 127 YKK 129 >UniRef50_C5NYL7 SUF system FeS assembly protein, NifU family n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYL7_9BACL Length = 142 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 23/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DH ++PRN G + + + P+CGD + + +K+ D+ IIED +F Sbjct: 9 LYKQVILDHSKHPRNNGEIE----SSYKLEMLNPSCGDKITVSMKLVDD-IIEDIKFVGT 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQA------------------IKNTDIAEELELPPVK 103 GC ++AS+S++TE +KG S+++A ++++ + + P + Sbjct: 64 GCSISLASASMLTEELKGLSVEKANDKIKDFLNMIMGNEFNEENLEDSISLQNISQLPAR 123 Query: 104 IHCSILAEDAIKAAIAD 120 + C+ LA + + + Sbjct: 124 VKCATLAWKITEKILEE 140 >UniRef50_B6QUS0 Iron-sulfur cofactor synthesis protein (Isu1), putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QUS0_PENMQ Length = 189 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 8/131 (6%) Query: 1 MAYSEKVIDHYENPRN---VGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDA 56 M ++ + H N N VGS D +VGSG+VGAPA ++L I+V+++ G I + Sbjct: 43 MPTTKALFIHRHNHANLKLVGSLDRKSNDVGSGLVGAPA----IRLDIQVDEKTGKIVKS 98 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKA 116 FKT+GCGSAIASSS +T + GK+L+EA I+NT IA EL LPPVK+HCS+LAEDAIKA Sbjct: 99 AFKTFGCGSAIASSSYLTTLLAGKTLEEAGKIQNTQIANELCLPPVKLHCSLLAEDAIKA 158 Query: 117 AIADYKSKREA 127 AI +Y+SKR A Sbjct: 159 AIKNYQSKRPA 169 >UniRef50_C0VZ96 Possible iron-sulfur (Fe-S) cluster formation protein IscU n=3 Tax=Actinomycetales RepID=C0VZ96_9ACTO Length = 156 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 25/144 (17%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y + ++DH G+ + S P CGD + L + +++ G I + Sbjct: 6 VMYQQVILDHSRARCGSGTL--PVDIQTSSYQVNPTCGDEVTLGLNLDEAGEITQLIWDG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQA-----------------------IKNTDIAEEL 97 GC + AS S+++E ++GKSL E I++ E Sbjct: 64 DGCSISQASLSIMSELLEGKSLAEIAQFYDDFETMMHSRGQGVDDDLLDRIEDGAALEGT 123 Query: 98 ELPPVKIHCSILAEDAIKAAIADY 121 P +I C++L A+K A+A Sbjct: 124 SKFPNRIKCALLGWYALKDALAKA 147 >UniRef50_Q21XB3 SUF system FeS assembly protein n=6 Tax=Bacteria RepID=Q21XB3_RHOFD Length = 162 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 24/138 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DH PRN G D+ P CGD + + + + + +E F Sbjct: 8 LYQEVILDHNRKPRNYGELDHPS---HHAEGVNPLCGDHIHVALDLKGDS-VERIAFHGE 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--------------------DIAEELELPP 101 C AS+S++T VKGKS EA+ + + + + P Sbjct: 64 SCAICKASASMMTVAVKGKSAIEAKTLIHEFVDMATGRIAAKDSPHIGRLAVFSGISELP 123 Query: 102 VKIHCSILAEDAIKAAIA 119 +++ C+IL ++AA Sbjct: 124 MRVKCAILPWHTLQAAFN 141 >UniRef50_D1AKY8 SUF system FeS assembly protein, NifU family n=6 Tax=Bacteria RepID=D1AKY8_SEBTE Length = 148 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 25/141 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++++ ++ P CGD + L+IK+N + IIEDA F Sbjct: 6 LYQQTILEYSSRKDLKREIESP---TYIERGHNPNCGDDLTLEIKLNSDNIIEDAAFLGN 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA----------------------QAIKNTDIAEELEL 99 GC + AS++++ + +KGKS++EA + + + + E + Sbjct: 63 GCAISSASTAMLIDLIKGKSIEEAKEKTDIFFKMMGQKEKLNSDEMKKLGDAVLMEYVAN 122 Query: 100 PPVKIHCSILAEDAIKAAIAD 120 P +I C+ L+ ++K I Sbjct: 123 MPARIKCATLSWHSLKVIIDK 143 >UniRef50_UPI0001C31C45 nitrogen-fixing NifU domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C45 Length = 137 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 3/119 (2%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENV-GSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 Y E +++HY+ P N + + P CGD +++QI V+ E +E RF Sbjct: 4 LYREYILEHYKRPHNWSPPEEELVSPDLEFEDSNPLCGDTLRVQIAVDAENRVEQIRFSG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAA 117 +GC + A++S+ ++ VKG +++ + + + E L + ++ C++L+ +K+A Sbjct: 64 HGCAISQAAASMSSDEVKGMPVEDLMRLDKSFVLELLGIDISATRMKCALLSLKVLKSA 122 >UniRef50_B8DUN6 SUF system FeS assembly protein, NifU family n=16 Tax=Actinobacteridae RepID=B8DUN6_BIFA0 Length = 191 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 67/170 (39%), Gaps = 43/170 (25%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSG-----------------MVGAPACGDVMKLQ 44 Y E ++D +P G+ + + G P CGD + + Sbjct: 12 MYQEVILDASRHPHGRGTLTSEGDPAAIGGEATVTAVHESCSAARSHQFNPTCGDEVTVH 71 Query: 45 IKVNDEG--IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQ---------------- 86 ++V+D IE + GC + AS S++ V+GK++DEA Sbjct: 72 VEVSDSEPHRIESVVWDGQGCSISQASLSIMVNLVEGKTVDEAMELFGQFHKLMESRGAG 131 Query: 87 --------AIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK 128 A+ + + + + P++I C++L + ++ ++A + + ++ Sbjct: 132 LDDEQAEDALGDAAVFQGVSKYPMRIKCALLGWEGLRDSLAKALASQHSE 181 >UniRef50_A0RRI4 Nitrogen fixation protein NifU n=55 Tax=cellular organisms RepID=A0RRI4_CAMFF Length = 333 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 13/134 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN-----VGSGMVGAPACGDVMKLQIKVNDE-GIIEDA 56 YS+KV D +P+N+G N + GA +CGD ++L V II+DA Sbjct: 15 YSQKVQDAMNHPKNMGEITEEQANAMGCELIIADHGAESCGDAVRLYWAVEKNTDIIKDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-------LPPVKIHCSIL 109 +FK++GCG+AIASS + E KGK++DEA I N D+ + + +PP K+HCS++ Sbjct: 75 KFKSFGCGTAIASSDYMAELCKGKTVDEAVKITNIDVEKAMRDDPEIPAVPPQKMHCSVM 134 Query: 110 AEDAIKAAIADYKS 123 A D IKAA A YK Sbjct: 135 AYDVIKAAAASYKG 148 >UniRef50_C0WNL2 Iron-sulfur (Fe-S) cluster formation protein IscU n=4 Tax=Lactobacillus RepID=C0WNL2_LACBU Length = 151 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 25/140 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y +IDH + PR+ G + G + P CGDV+K+ + V D G I D F Sbjct: 9 LYKTVIIDHAQFPRHKGELADP---TGEKCLKNPTCGDVIKVSVVVKD-GQINDVAFDGS 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQA---------------------IKNTDIAEELELP 100 GC + AS+SL+T + GK + A+ + + I + Sbjct: 65 GCTISQASASLMTTVLIGKDVKTARKLILAFSKLISGDEIDDEDEELLGDAAIVGTVAEF 124 Query: 101 PVKIHCSILAEDAIKAAIAD 120 P +I C+ LA A+ + + Sbjct: 125 PTRIKCAALAWHAMDEVLNE 144 >UniRef50_Q03UL7 Fe-S cluster formation protein, NifU-like n=2 Tax=Leuconostoc mesenteroides RepID=Q03UL7_LEUMM Length = 144 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 21/136 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 + Y + V+++ ++P + P CGD++ L ++ D+ + D F Sbjct: 8 LLYRQTVMEYAQHPHHYKPMLG--TETYHVRKYNPTCGDIIDLAFEMTDDK-VTDIYFYG 64 Query: 61 YGCGSAIASSSLVTEWVKGK------------------SLDEAQAIKNTDIAEELELPPV 102 GC + AS+S++T+ V G+ + + + + I + P Sbjct: 65 DGCAISKASASMMTDLVLGQRREAVATLLEEFSKLTRGEVADTKLLGEAQILAGVTKFPT 124 Query: 103 KIHCSILAEDAIKAAI 118 +I C+ LA A+ + Sbjct: 125 RIKCATLAWHALDELL 140 >UniRef50_C9KQH6 SUF system FeS assembly protein, NifU family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQH6_9FIRM Length = 148 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 64/139 (46%), Gaps = 25/139 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+E + +H NP N + + P+CGD + L++++ + G+++DA F G Sbjct: 7 YTELIGEHSRNPENKHHLAHATCAL---KGHNPSCGDEITLELQI-ENGVVKDASFTGVG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELPP 101 C + AS+ ++ + ++G+ +++A+ + I + + P Sbjct: 63 CAISQASTDIMIDLIRGQKVEKARELAEKFIGMIKREITDESELEELDEALALQNVSNMP 122 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C++LA + A+A Sbjct: 123 ARVKCAVLAWHTLDNALAK 141 >UniRef50_Q04EW3 Fe-S cluster formation protein, NifU-like n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04EW3_OENOB Length = 146 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 23/138 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++D + R G N + P CGDV++LQIKV+D I F+ Sbjct: 9 LYRQVILDAAVDQRYRGQLLNP---TAVQLAHNPNCGDVLELQIKVSD-RHITAIAFQGQ 64 Query: 62 GCGSAIASSSLVTE-------------------WVKGKSLDEAQAIKNTDIAEELELPPV 102 GC + AS+S++ + + GK E + + + ++ P Sbjct: 65 GCTISQASASILADLALHQSLESMQTRISQFQKMITGKESVEIDQLGDASVFSKISQFPT 124 Query: 103 KIHCSILAEDAIKAAIAD 120 ++ C+ L DA++ + + Sbjct: 125 RVKCAGLVWDALEQMLKN 142 >UniRef50_A9A1A8 SUF system FeS assembly protein, NifU family n=4 Tax=cellular organisms RepID=A9A1A8_NITMS Length = 147 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 7/126 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y E ++D+ NP N G +++D P CG D+ + D +F G Sbjct: 8 YHEMIVDYSRNPVNYGEIEDHDVTFHDA---NPLCG-DSIDIDMKIDDDKVTDIKFHGKG 63 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP---PVKIHCSILAEDAIKAAIA 119 C +A SS++TE KGKSL++ + I+ D+ EL L V+I C++L+ +K+A+ Sbjct: 64 CAICMACSSVLTEITKGKSLEDVKNIEKNDVLSELGLEHLQAVRIKCALLSLKVLKSALY 123 Query: 120 DYKSKR 125 Y +K Sbjct: 124 TYLAKH 129 >UniRef50_C1AC48 Iron-sulfur cluster biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC48_GEMAT Length = 148 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 22/138 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++ H+ P N + + S + P CGD +++ ++V+ G + D F Sbjct: 13 MYQEALLAHHRAPHNRRDMPDAN---ASAVFKNPVCGDEIQVFVRVDG-GHLVDVSFTGR 68 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT------------------DIAEELELPPVK 103 GC A AS+S++T+ V G S+ EAQ + + P + Sbjct: 69 GCSIATASASMMTDAVMGLSVSEAQGLSAALERTLVSPDETVALPDVLVPLRSVAPFPGR 128 Query: 104 IHCSILAEDAIKAAIADY 121 C +A A+ A+ + Sbjct: 129 HGCVRMAWQALHQAVQNA 146 >UniRef50_C4Z7J6 Nitrogen fixation protein NifU-like protein n=10 Tax=Bacteria RepID=C4Z7J6_EUBE2 Length = 146 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Y+E + DH +P + DN D + P+CGD + L++K +D + I D F Sbjct: 7 YNEVLTDHNMHPYHKHDIDNADLEL---EGVNPSCGDDIILKLKFDDAKKTIVDGAFTGD 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI--------------------AEELELPP 101 GC + AS+ ++ E + GK +DEA + + ++ P Sbjct: 64 GCAISQASADIMLELIIGKPIDEAVHLSELFLKMIKDEATEEEIDELDEAGALRDISHMP 123 Query: 102 VKIHCSILAEDAIKAAIADYKS 123 ++ C++L ++ + + K+ Sbjct: 124 ARVKCAVLGWHTMEEMVENLKN 145 >UniRef50_B9KY40 NifU family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY40_THERP Length = 156 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 8/126 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKTYGC 63 E++++HY PR+ + + D + G P CGD++ + +KV+++G I +A F+ GC Sbjct: 2 EQIVEHYRRPRHRHALPDADVVMP---GGNPGCGDIVTIYLKVDEQGHLIAEASFEGEGC 58 Query: 64 GSAIASSSLVTEWVKGK--SLDEAQAIKNTDIAEELELPPV--KIHCSILAEDAIKAAIA 119 + A++ ++ + V + +L++ + E + V + C+ LA +KAA+ Sbjct: 59 TISQAAADILLDVVNEERWTLEQVLEADYHLMEELIGEEAVKLRPRCATLALGTLKAAVT 118 Query: 120 DYKSKR 125 Y + Sbjct: 119 KYLRDQ 124 >UniRef50_C9LR10 SUF system FeS assembly protein, NifU family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR10_9FIRM Length = 149 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 65/148 (43%), Gaps = 25/148 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y++ ++++ + N + + P+CGD + +++KV GII+D + Sbjct: 6 LYTDLILEYNRDKTNKRKVEAPTVHEH---GHNPSCGDDIDVEVKVEG-GIIKDLAYTGT 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI---------------------AEELELP 100 GC + AS++++ E ++ +++DEA + + +++ Sbjct: 62 GCAISQASTAMMAELLQDRTVDEAIRLCKLFLAMIRGDVKDEAALEELEAAYTLKDISQM 121 Query: 101 PVKIHCSILAEDAIKAAIADYKSKREAK 128 PV++ C+ L ++ A+ + E K Sbjct: 122 PVRVKCATLGWHTLEVALEKITADLENK 149 >UniRef50_C3RKP2 SUF system FeS cluster assembly protein n=6 Tax=Bacteria RepID=C3RKP2_9MOLU Length = 142 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 21/138 (15%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M + ++DHYENPRN G D+++ S + + C D + +Q + D G+I+D RF Sbjct: 7 MMLRQIIMDHYENPRNHGLVDDDNYQ--SVNMDSETCIDDIDVQALIED-GVIKDIRFDG 63 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNT------------DIAEEL------ELPPV 102 C AS+S+++E + GK++DEA I +I EE Sbjct: 64 EACAICTASTSIMSELLIGKTIDEANVIIENYNNMIYEKDYDPEILEEAIAFMNTHKQAN 123 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ L IK + Sbjct: 124 RIKCATLGWTGIKQILDK 141 >UniRef50_Q60A81 NifU family protein n=1 Tax=Methylococcus capsulatus RepID=Q60A81_METCA Length = 126 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 23/124 (18%) Query: 20 FDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKG 79 ++ + V P CGD + L +K++D G+I D F+ GC + AS+SL+TE V+ Sbjct: 1 MEDANRTV---EGFNPLCGDRITLYVKIDDAGVIRDVSFQGSGCAISTASASLMTEIVRN 57 Query: 80 KSLDEAQAIKNT--------------------DIAEELELPPVKIHCSILAEDAIKAAIA 119 EA A+ T + + P ++ C+ LA +++AA+ Sbjct: 58 MHESEAHALFETFHRIATGKDDAVNLEELGKLAVLAGVRAYPARVKCATLAWHSLEAALE 117 Query: 120 DYKS 123 + ++ Sbjct: 118 NQET 121 >UniRef50_D1CFT0 Nitrogen-fixing NifU domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFT0_THET1 Length = 134 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 6/124 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN-DEGIIEDARFKTY 61 Y++ IDHY +PRNVG + G+G G G + +QI + +IED RF+ + Sbjct: 11 YTDITIDHYLHPRNVGIIPDA---TGAGTAGDQEKG-QIMIQITLRCSNRVIEDIRFRAF 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIAD 120 GC + IAS+S+VTE KGK+L+EA+AI + + E LP K++C+ A +A+ AI D Sbjct: 67 GCSATIASASMVTELAKGKTLEEAEAITSHVLLEALGGLPQDKLYCADYATEALHIAIKD 126 Query: 121 YKSK 124 S+ Sbjct: 127 AISR 130 >UniRef50_B1ML97 Similarity with Nitrogen-fixing NifU-like proteins n=2 Tax=Mycobacterium RepID=B1ML97_MYCA9 Length = 133 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 +S VIDH+ NPRN G D D + +G P CGD + L ++ DE ++ F+ YG Sbjct: 4 FSPAVIDHFTNPRNAGRLDQADV---TAFIGNPVCGDQILLSAQIRDE-VVSRIGFEAYG 59 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADY 121 C +++A +S++TE + G + + + I+ + E L P + H + L D + +Y Sbjct: 60 CSASLAVASILTERLSGMPVRDIETIQAAQVIEWSGGLSPEQQHVAALGADVAQRLANNY 119 Query: 122 KS 123 ++ Sbjct: 120 RN 121 >UniRef50_B8FAZ4 Nitrogen-fixing NifU domain protein n=2 Tax=Desulfobacteraceae RepID=B8FAZ4_DESAA Length = 146 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 6/128 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS+K I +Y + +G + ++ + P CGD MK+ +K+ D+ I+DA+ + Sbjct: 22 GYSDKAIQYYVERKGMGKLEEANQIT---ELTGP-CGDTMKVFLKIEDDK-IQDAKIQVL 76 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GC AI+S+ + + KGK+L+EA+ I I +ELE +P K HC L ++ AI + Sbjct: 77 GCPGAISSAMVAMDMAKGKTLEEAKTITEGVIFKELENIPDQKQHCIQLTVKTLQNAIEE 136 Query: 121 YKSKREAK 128 Y+ K Sbjct: 137 YQKGNNHK 144 >UniRef50_B1MVR5 NifU-like protein n=1 Tax=Leuconostoc citreum KM20 RepID=B1MVR5_LEUCK Length = 146 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 21/140 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + V+D+ ++P + D P CGD+++L + V + I F G Sbjct: 10 YRQAVLDYAQHPHHKAPVTKADSC--QIEQYNPTCGDIIRLALTV-EHQTIVACHFDGEG 66 Query: 63 CGSAIASSSLVTEWVKGKSL------------------DEAQAIKNTDIAEELELPPVKI 104 C + AS+S++ + + +SL + + + + + + P ++ Sbjct: 67 CAISTASASIMMDLIIAQSLVTTKEQIKLFSRMVTGDDGDYKMLGDAQMLAGVTQFPARV 126 Query: 105 HCSILAEDAIKAAIADYKSK 124 C+ L A+ I + + Sbjct: 127 KCATLPWHALSLLIQQIEEE 146 >UniRef50_D0RPD7 SUF system FeS assembly protein, NifU family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPD7_9RICK Length = 152 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 27/149 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + +++H +NP N S P CGD +++ + ++ I ++ F+ G Sbjct: 7 YQQTILEHSKNPLNFKSLK---TCTHQANGNNPLCGDKVEIFTNIKND-INDEICFQGAG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-----------------------AEELEL 99 C +IAS+S++T+ + KS+ +++ I I EL+ Sbjct: 63 CAISIASASILTKVLNKKSVQDSKNILENFIKMVENKEFNFDLLNNEEKTLLMTFSELQK 122 Query: 100 PPVKIHCSILAEDAIKAAIADYKSKREAK 128 P++ C+ ++ AA+ EAK Sbjct: 123 FPMRSKCATMSWSTFNAALNRDNYNTEAK 151 >UniRef50_Q023P2 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023P2_SOLUE Length = 118 Score = 104 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 8/122 (6%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E+++DH++NPRNVG + V V PACGD+++L + G I +A +K Sbjct: 1 MYPERLLDHFQNPRNVGELPSPAITV---EVSNPACGDILRLSALFTE-GRIAEASYKVR 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSIL---AEDAIKAA 117 GC ++IA+ S +TEW+ GK+ DE T I E + LP H ++L A++ A Sbjct: 57 GCTASIAAGSALTEWLAGKTRDELSRFTATLIDEAVGGLPTASKHAAVLCADGVKALRRA 116 Query: 118 IA 119 + Sbjct: 117 LD 118 >UniRef50_C8X380 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X380_DESRD Length = 143 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCG 64 + + NP +VG+F D G G + CGD ++++I V + G I +ARF T GCG Sbjct: 25 DTAYALWRNPIHVGTFSQPD---GVGDLTG-ECGDSIQIEILVRE-GRIHEARFWTDGCG 79 Query: 65 SAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADYKS 123 +I S + E GKSL+EA +++ +I E LP K HC+ LA ++ A+ Y Sbjct: 80 PSIVSGCVACELACGKSLEEAASLQAGEILEYLGGLPEDKEHCAHLAARTLQEAVDAYMR 139 Query: 124 KREA 127 R+ Sbjct: 140 SRQG 143 >UniRef50_D1C3Y7 Nitrogen-fixing NifU domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3Y7_SPHTD Length = 167 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 8/126 (6%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKTYGC 63 E ++DHYE+PR+ + + D + G P CGDV+ + + V+++G ++D F GC Sbjct: 8 EMLLDHYEHPRHRHADEGADVVMP---GGNPGCGDVITVYLTVDEDGKSVKDVSFVGEGC 64 Query: 64 GSAIASSSLVTEWVKGK--SLDEAQAIKNTDIAEELELP--PVKIHCSILAEDAIKAAIA 119 + A++S++ E + + LD + + L + C+ LA +KAA+ Sbjct: 65 TISQAAASILMEMIHDEKWDLDTIVNTDYHAMMDILGAEAVQSRPKCATLALGTLKAAVQ 124 Query: 120 DYKSKR 125 Y R Sbjct: 125 KYLRDR 130 >UniRef50_B7K023 SUF system FeS assembly protein, NifU family n=2 Tax=Cyanothece RepID=B7K023_CYAP8 Length = 144 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 26/139 (18%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVG-APACGDVMKLQIKVN-DEGIIEDARFKTY 61 + ++DHY+ P + G V G P CGD++ L I++N E IIED +F+ Sbjct: 5 QQLILDHYKQPHHRGR----TALVHRSHQGRTPYCGDIINLTIQLNASEEIIEDLQFEGN 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPV----------------- 102 GC +AS+ L+ E V+GK + EA + + + P Sbjct: 61 GCVICLASADLMAEAVRGKRVHEALQMVEQFRQMMQGQGKFPDYPQELAKLNSLQTITHP 120 Query: 103 -KIHCSILAEDAIKAAIAD 120 +I C+ LA +KAA++ Sbjct: 121 LRIKCANLAWYTLKAALSQ 139 >UniRef50_A0LFU2 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFU2_SYNFM Length = 144 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 6/124 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS K I + ++G+ + D CGD M + +KV D G+I D +++ Sbjct: 24 GYSRKAIRLFIEKPHMGTIPDADHVSEM----TGTCGDTMSVCLKVQD-GVIRDLKYQVL 78 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIAD 120 GC A+AS+ E +KGK+++EA+++ + DI L E+P K HC LA +K A+ + Sbjct: 79 GCPGAVASAMAAVELIKGKTIEEARSLNDGDIFRLLEEIPAQKHHCIQLAVKTLKKALDE 138 Query: 121 YKSK 124 Y K Sbjct: 139 YARK 142 >UniRef50_C8W9P1 SUF system FeS assembly protein, NifU family n=6 Tax=Coriobacteriaceae RepID=C8W9P1_ATOPD Length = 175 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 62/147 (42%), Gaps = 25/147 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+ + +DH +P DN + P+CGD + +++ D G I +A F Sbjct: 6 LYNAEFMDHVSHPDYKYQMDNPTVSHA---GVNPSCGDELTFSVRIED-GKIAEAAFVGS 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA---------------------QAIKNTDIAEELELP 100 GC + AS+ ++++ + ++ +EA +++ +I ++ Sbjct: 62 GCAISQASADIMSDLMIDRTPEEAIELCKLFGRMIRGEETDEAVLDKLEDANILHDIAHM 121 Query: 101 PVKIHCSILAEDAIKAAIADYKSKREA 127 P ++ C+ LA ++ + + + A Sbjct: 122 PARVKCAELAWHTLEEMLEAHNNGSTA 148 >UniRef50_C6C1H8 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H8_DESAD Length = 141 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 11 YENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 + NP + +N D G CGDV+K+ +K+ D + +A F T GCG +I SS Sbjct: 31 WHNPTYARTMENPDSTGEV--RGN--CGDVIKIFLKI-DNNTVSEASFFTTGCGPSIVSS 85 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADYKSKR 125 +V E GK++D A I DI E LP K HC+ LA A++ A+ ++ K+ Sbjct: 86 DMVCELCMGKNIDAASEIDGEDILERLGGLPEDKTHCAHLASSAMQEALGNWMEKK 141 >UniRef50_A4EB20 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB20_9ACTN Length = 144 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 58/137 (42%), Gaps = 25/137 (18%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 S ++H +P D P+CGD + LQ++V ++ +IE+A F +GC Sbjct: 7 STTFMEHNSHPDYKYEMDAP---THEHDGINPSCGDELTLQLRVEND-VIEEASFTGHGC 62 Query: 64 GSAIASSSLVTEWVKGKSLDEAQ---------------------AIKNTDIAEELELPPV 102 + AS+ ++ + + G++++EA+ + +++ P Sbjct: 63 AISQASADIMADLITGETVEEARRLAGLFLAMIRGEKLSEDDLEDLDEAAQLQDISHMPA 122 Query: 103 KIHCSILAEDAIKAAIA 119 ++ C+ LA + + Sbjct: 123 RVKCAELAWRTLDGMLE 139 >UniRef50_Q07HZ2 Nitrogen-fixing NifU domain protein n=7 Tax=Rhodopseudomonas palustris RepID=Q07HZ2_RHOP5 Length = 339 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 79/126 (62%), Gaps = 5/126 (3%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTYG 62 +++ +H+ NP+NVG + G VGA GD +KL ++++ IE ARF+TYG Sbjct: 8 TDRFGEHFANPKNVGVLAEAN---AVGSVGALDYGDAVKLMLRIDPATDRIEQARFQTYG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADY 121 C SAIA+SS +TE + GKS+DEA I D+AE LP +++CS++ +A++ AIA Y Sbjct: 65 CSSAIAASSAITEMIIGKSIDEALEISAADVAEFLGGLPDERMYCSVMTYEAVQKAIAAY 124 Query: 122 KSKREA 127 + EA Sbjct: 125 RHPEEA 130 >UniRef50_A5D4Q3 NifU homolog n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4Q3_PELTS Length = 150 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 53/100 (53%), Gaps = 5/100 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+ VIDH NPRNVG+ N D CGD M + +KV D I +A F T G Sbjct: 17 YSDTVIDHARNPRNVGNIPNCDGFS----QETGECGDTMAIWLKVIDNK-INNATFWTDG 71 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV 102 CG+ IA S+VTE K S++EA IK DI L P Sbjct: 72 CGTTIACGSMVTEMAKNLSVEEALKIKAEDILNALGGLPE 111 >UniRef50_A8DR52 NifU n=1 Tax=uncultured bacterium RepID=A8DR52_9BACT Length = 311 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 18/139 (12%) Query: 3 YSEKVIDHYENPR------NVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE------ 50 YS+KV+ + + ++G +N D G G G+ CGD ++ +V Sbjct: 5 YSDKVLKLFMDAVKGETGTHMGELENPD---GFGEHGSIVCGDTLRFTFRVERHLTDPTR 61 Query: 51 GIIEDARFKTYGCGSAIASSSLVTEWVK--GKSLDEAQAIKNTDIAEEL-ELPPVKIHCS 107 II AR+ T+GC SAIA+S + ++ GK+ EA + N D+ + L LP KIHCS Sbjct: 62 DIITQARYLTFGCTSAIAASEALCTLLEEQGKTPIEALQVSNQDLIDFLDGLPEQKIHCS 121 Query: 108 ILAEDAIKAAIADYKSKRE 126 ++ +A++ A+AD+ SKR Sbjct: 122 VMGAEALQKAVADWASKRG 140 >UniRef50_B0RG88 NifU-like protein n=2 Tax=Clavibacter michiganensis RepID=B0RG88_CLAMS Length = 147 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 25/139 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E ++DH P G + P CGD + L +++ D G + + + + Sbjct: 11 LYQELILDHSRTPEGQG---DPTGWPLHAHQVNPTCGDEITLGVRIED-GRVAEIAWTGH 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEA---------------------QAIKNTDIAEELELP 100 GC + AS+S++ + G LD A + + + + Sbjct: 67 GCAISQASASMLVGVLDGVDLDTAHARAAAFREVMRSRGASHLDPEEFGDAVALDGVSRY 126 Query: 101 PVKIHCSILAEDAIKAAIA 119 ++ C++L ++ A+ Sbjct: 127 MGRVKCAMLPWTTLEEALR 145 >UniRef50_B8CH94 FeS assembly protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH94_SHEPW Length = 122 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 64/109 (58%), Gaps = 5/109 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y++ +ID++ NP+ VG ++ D +G P CGD + +Q+ + + I ++ F+ + Sbjct: 1 MYNDIIIDNFSNPKFVGDLESADYKF---EIGNPVCGDRIHMQVSFDGDN-IRESSFRAW 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSIL 109 GC +++A++++ + + GKS+DE + +I++ L L P + HC + Sbjct: 57 GCATSVATANIFCDSIIGKSIDEISMRQADEISDMLGELEPSQQHCINI 105 >UniRef50_Q1J1X4 SUF system FeS assembly protein n=4 Tax=Deinococci RepID=Q1J1X4_DEIGD Length = 140 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 23/134 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + + DH ++PR G V P CGD + + +V G + + RF GC Sbjct: 8 RQIITDHSQHPRGRGEI----AGVPHATRENPGCGDQVTVWARVEG-GRLLEVRFTGRGC 62 Query: 64 GSAIASSSLVTEWVKGKSLDEAQ------------------AIKNTDIAEELELPPVKIH 105 + AS+SL+T+ + GK L+EA+ A+ + + + Sbjct: 63 AISQASASLMTQALAGKGLEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHARRK 122 Query: 106 CSILAEDAIKAAIA 119 C++LA A++AA+A Sbjct: 123 CALLAWQALEAALA 136 >UniRef50_B8FN62 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN62_DESAA Length = 142 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS++V + + +P+ G ++ SG V +CGD M++ +K+ D GI+ D+ F T G Sbjct: 24 YSKEVYERWRDPKRFGRMEDA---TASGKVRG-SCGDSMEIYLKIED-GIVIDSSFFTDG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADY 121 CG +++S S+ + K ++ I I E LP +HC+ LA A+ A+ Y Sbjct: 79 CGPSVSSGSMAADLAMKKGVEALTDITGEVILEALGGLPEESLHCAGLAASALSDAVDSY 138 >UniRef50_Q03GT9 Fe-S cluster formation protein, NifU-like n=3 Tax=Lactobacillales RepID=Q03GT9_PEDPA Length = 146 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 22/137 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +++H + P VG + + P CGD +++ +KV D+ +E F Sbjct: 7 LYQKIIVNHAKYPIGVGVLPQYN---YHAKLKNPDCGDDIEVYLKVVDQ-HLEQISFTGQ 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ------------------AIKNTDIAEELELPPVK 103 GC + AS+S++ + + GK + EAQ + + L P + Sbjct: 63 GCIISQASASMMVDALSGKRILEAQQLMQNFQNLILGKDYDESQLGDLIAFATLNQFPTR 122 Query: 104 IHCSILAEDAIKAAIAD 120 + C +LA A+ + Sbjct: 123 VRCGMLAWHAMADGLNQ 139 >UniRef50_C7MD35 SUF system FeS assembly protein, NifU family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MD35_BRAFD Length = 152 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 26/140 (18%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE--GIIEDARFK 59 Y+E V++H + P + G + D V P CGD + L++ ++++ IED + Sbjct: 8 LYTELVVEHDKRPLHAGLREPFDAEVHHV---NPTCGDEITLRLHLSEDVAERIEDLSYD 64 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEA---------------------QAIKNTDIAEELE 98 GC + AS+S++ + + G+++ E + + + Sbjct: 65 AIGCAMSRASASIMADLLIGRTVAEIGPVQTHFEQVIGSRGRIGGDEELLGDGMALLGAA 124 Query: 99 LPPVKIHCSILAEDAIKAAI 118 P ++ C ++ A +AA+ Sbjct: 125 KFPARVKCVLMPWKAYQAAL 144 >UniRef50_A1ZYV1 SUF system FeS assembly protein, NifU family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYV1_9SPHI Length = 142 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 21/136 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++ H + P N +E P CGD +L I + +I+ A F Y Sbjct: 8 LYQSVILTHNKTPHNF---KKAEELPLHSEAYNPLCGDHFQLYISLEGA-VIQQAFFHGY 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-----------------AEELELPPVKI 104 GC + AS+S++ + ++GK+L EA+ + T + + P + Sbjct: 64 GCAVSKASTSVLLQTIEGKTLTEAKTLIETFMQVVNGELPANIPEGFKAFAAAKHFPSRE 123 Query: 105 HCSILAEDAIKAAIAD 120 C+ L+ A + I + Sbjct: 124 QCATLSWQAFQTLIDE 139 >UniRef50_B7GS89 SUF system FeS assembly protein, NifU family n=7 Tax=Bifidobacteriaceae RepID=B7GS89_BIFLI Length = 184 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 46/171 (26%) Query: 2 AYSEKVIDHYENPR-------NVGSFDNNDE-------------NVGSGMVGAPACGDVM 41 Y E +++ ++P N + D G P CGD Sbjct: 14 MYQEVILEASKHPHGKESFAPNAAVEQSADAAANVTVQASHEYCTPGESHQFNPTCGDEA 73 Query: 42 KLQIKVNDEG--IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQ------------- 86 + ++V+D+ I+ + +GC + AS S++ + V GK++DEA Sbjct: 74 TIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVGGKTVDEAMDLEQTFHKLMESR 133 Query: 87 -----------AIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 + + + + + P++I C++L + +K +IA + + Sbjct: 134 GAGLDDENLEEKLGDAVVFQGVSKYPMRIKCALLGWEGLKDSIAKALAAKN 184 >UniRef50_B7EPE4 cDNA clone:J013066C15, full insert sequence n=1 Tax=Oryza sativa Japonica Group RepID=B7EPE4_ORYSJ Length = 123 Score = 98.7 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 53/72 (73%), Positives = 65/72 (90%), Gaps = 1/72 (1%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKT 60 AY E+V+DHYENPRNVGSF+N+D +VG+G+VGAPACGDVMKLQI+V++ G I DA FKT Sbjct: 33 AYHERVVDHYENPRNVGSFENDDPSVGTGLVGAPACGDVMKLQIRVDESSGKIVDACFKT 92 Query: 61 YGCGSAIASSSL 72 +GCGSAIASSS+ Sbjct: 93 FGCGSAIASSSV 104 >UniRef50_C1VDX7 Cysteine desulfurase n=2 Tax=Halobacteriaceae RepID=C1VDX7_9EURY Length = 543 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + V +HY NP+N G N S +CGD + + V ++G IE+ F++ Sbjct: 416 QYHDLVYEHYRNPQNTGGLSNPTFTKHSEET---SCGDDGEFHVDVAEDGTIENIAFESE 472 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELPPVKIHCSILAEDAIKAAIA 119 C + A +S+++E ++G SL+E + ++ + P ++ C + E+ I A Sbjct: 473 SCAVSSAVASMLSERLEGMSLEEVAELDGFVDEVLD-GTYPDIRRDCVVGPEEVICEAAR 531 Query: 120 DYKSKREAK 128 + + Sbjct: 532 EQMDGSNGR 540 >UniRef50_C2BX07 Possible iron-sulfur (Fe-S) cluster formation protein IscU n=3 Tax=Mobiluncus RepID=C2BX07_9ACTO Length = 180 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 27/144 (18%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +++ + G+ S P CGD + LQ+KV D G + + + + Sbjct: 7 LYQQLILEQSKARHGAGTLPG---WAASSHQVNPTCGDEVTLQVKVTD-GKLRELVWDGH 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ-----------------------AIKNTDIAEELE 98 GC + AS S++ E V+G+ L+ + + E + Sbjct: 63 GCSISQASLSMMWELVQGQDLEAVHGLEQDFNEMMHSRGRGVDEDLLDRLGDASSLEGVS 122 Query: 99 LPPVKIHCSILAEDAIKAAIADYK 122 ++ C++L A+K A+A + Sbjct: 123 RYVNRVKCALLGWMALKDALAQAE 146 >UniRef50_A6WDQ7 SUF system FeS assembly protein, NifU family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDQ7_KINRD Length = 146 Score = 98.0 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 25/138 (18%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + +I+H + P G P CGD + L++ V E + D + Sbjct: 6 LYQQLIIEHSKRPHGEGLR---SPFGAEAHHVNPTCGDEITLRVAVAGE-TVGDVSYDAV 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ---------------------AIKNTDIAEELELP 100 GC + AS+S++ + V G+ + E + + + Sbjct: 62 GCSISRASASVLHDLVVGRPVGEVAVVREAVQAMLTSRGADPGDEDVLGDAVALAGVARY 121 Query: 101 PVKIHCSILAEDAIKAAI 118 P ++ C++L+ A+ A+ Sbjct: 122 PARVKCALLSWSALADAL 139 >UniRef50_UPI000050F718 SUF system FeS assembly protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F718 Length = 155 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 24/145 (16%) Query: 2 AYSEKVIDHYENPRNVGSF--DNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFK 59 Y + ++DH D GS P CGD ++L+ ++ +G I R+ Sbjct: 8 LYQQVILDHSRERIGNADLLGDMAAGPHGSSHQINPTCGDEIELETELGSDGSIV-VRWT 66 Query: 60 TYGCGSAIASSSLVTEWVKGKSLD-----EAQ----------------AIKNTDIAEELE 98 GC ++AS+S+++E + +L+ EA+ + + + Sbjct: 67 GDGCSISMASASVLSELAEENTLEGMLDVEAKFHELMHSRGTMAGDEEILGDAAAFSGVS 126 Query: 99 LPPVKIHCSILAEDAIKAAIADYKS 123 P +I C++L+ A K A+ ++ Sbjct: 127 KFPARIKCALLSWVAFKDALNQAQT 151 >UniRef50_B8FDL0 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDL0_DESAA Length = 133 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 YS+K ++ + + G D D G CGD + I V + I+E RF G Sbjct: 12 YSDKFLELASDYNHAGIPDRYDARGGQ----TGQCGDTVHFFISVMHKRIVE-VRFALEG 66 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAIKAAIADY 121 C +A ++ + E + K ++EA + + +AE LP HC+ LA A+ +AD Sbjct: 67 CMHTLACANAIVEMIAEKPVEEAWDVTDDAVAEYLGGLPEDHYHCAELAVGALYKTLADL 126 Query: 122 KSK 124 K+K Sbjct: 127 KTK 129 >UniRef50_C0QAY3 Predicted iron-sulfur cluster assembly protein (NifU like protein) n=2 Tax=Deltaproteobacteria RepID=C0QAY3_DESAH Length = 149 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 6/122 (4%) Query: 8 IDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAI 67 + ++NPR G D+ D + + CGD M + K + ++E A + T GCGS+ Sbjct: 29 FERWQNPRFRGRLDDYDVHGHAL----GDCGDSMDIYFKFERDRVVE-ASYMTDGCGSSN 83 Query: 68 ASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADYKSKRE 126 S E G +E I I +L +P HC+ LA ++ A+ Y + Sbjct: 84 VCGSFAAEMTIGMGAEELADITGDMILAKLGNMPEDDRHCAFLAAGTVQEALRIYMTGSR 143 Query: 127 AK 128 + Sbjct: 144 ER 145 >UniRef50_A0LFS6 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFS6_SYNFM Length = 141 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAP--------ACGDVMKLQIKVNDEGIIEDA 56 +K +D + N +V + + + P CGD +++ + V D G I A Sbjct: 3 DKTLDFWRN-HSVRFLEMALTDHYREVPANPDGYARVVRECGDTVEMFLMVRD-GKIRTA 60 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIK 115 F+T GC ++A ++ G + +EA+ I I E LE LPP + HC+ A A++ Sbjct: 61 SFETNGCIYSVACANTAVHMASGLTPEEARRITPDQIVEFLETLPPEEEHCAEQAVKALR 120 Query: 116 AAIADYKSKRE 126 A+AD + Sbjct: 121 LALADARDGER 131 >UniRef50_A6Q975 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q975_SULNB Length = 152 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN---DEGIIEDAR 57 M +VI+H NP+N GS + GM P G+ + + ++V +E I D + Sbjct: 1 MTMDAQVIEHMMNPKNYGSLPGTN---AEGMGKNPENGEKVAIYMRVETDEEEPYIGDIK 57 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAA 117 F+ GC + + + S++TE KG +L+ A + + + +LP CS + AIKAA Sbjct: 58 FQAIGCTTTVVAGSMLTEEAKGLNLNGAYNLVDATMKLLEKLPAEDAACSEMVALAIKAA 117 Query: 118 IADYKSKRE 126 + Y ++E Sbjct: 118 VDTYVKRQE 126 >UniRef50_Q7MYK4 Similarities with nitrogen fixation proteins n=2 Tax=Photorhabdus RepID=Q7MYK4_PHOLL Length = 118 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 ++ +ID++ NP G+ + +G P CGD + + + ++++G + +A F+ + Sbjct: 1 MFNNIIIDNFCNPDCQGTLSAPTIKLA---LGNPVCGDKVDIDLTLDNQGRVNNACFRAW 57 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GC +++A S+ KGK+L+E A+ I L L P + HC D + Sbjct: 58 GCTASLAMSNQFCRHAKGKTLEELNALSPEGIDALLGELEPAQQHC----LDMLHKLFEQ 113 Query: 121 YKSK 124 K K Sbjct: 114 LKGK 117 >UniRef50_C8P0L7 NifU domain protein n=2 Tax=Erysipelotrichaceae RepID=C8P0L7_ERYRH Length = 146 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 23/135 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++DHYENPRN + DE V +C D + +Q + G+IED F C Sbjct: 11 RQLIMDHYENPRNKRT----DETYPKKRVSTDSCIDDLTIQAFIK-NGVIEDVCFDGQAC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEELELPPVKIH 105 A +++S++TE VKGK++ EA I + + + +I Sbjct: 66 TIATSAASIMTELVKGKTVAEADQIIAEYNRMIHLENFDEQLLQEAVAFKNVGRQANRIT 125 Query: 106 CSILAEDAIKAAIAD 120 C+ L + I + Sbjct: 126 CATLGWRGLTDIIEE 140 >UniRef50_D2EEV4 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEV4_9EURY Length = 125 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 7/113 (6%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 +++ Y NP + G + S +P+CGD + + V + GI++DA F GC + Sbjct: 9 LVELYRNPEHYGKLSKYN---YSENGYSPSCGDKFSVYLDV-ENGIVKDASFDGKGCVIS 64 Query: 67 IASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP---VKIHCSILAEDAIKA 116 S S + ++ GK L E + ++ D+ L + ++ C+ + DA+K Sbjct: 65 TVSLSKLCSFLIGKPLKEIEKMELKDVESLLGIEDISISRVKCATVGLDAVKK 117 >UniRef50_Q1IN98 Nitrogen-fixing NifU-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IN98_ACIBL Length = 120 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 5/113 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS +++DH+ENPR G V + PACGD+++L ++++ G++ + RF+ Sbjct: 1 MYSARLLDHFENPRYAGELPGATAKV---RIENPACGDILELAAEIHE-GVVREIRFRAK 56 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDA 113 GC A+A S + ++G+S+ + I+ D+ E+E +P H LA DA Sbjct: 57 GCVPAMACGSAIATLIQGQSVAQLLKIRREDVLREVESVPQASGHAVHLALDA 109 >UniRef50_D2MQI8 SUF system FeS assembly protein, NifU family n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI8_9FIRM Length = 152 Score = 95.3 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 21/135 (15%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 E ++DHY+ P + S + +C D + ++ KV + GII+D F+ C Sbjct: 14 RELILDHYQYPHHHKLIKKA--PYQSVHKASDSCIDDITVEAKV-EAGIIQDINFEGVAC 70 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDI------------------AEELELPPVKIH 105 + AS+S++ + + GK+ +EA+ + + + + +I Sbjct: 71 AISTASTSMMADLLIGKTKEEAKVLIENFLHMVHEEAYDPDSLEEAIALKNVYRQANRIK 130 Query: 106 CSILAEDAIKAAIAD 120 C+ + A++ + Sbjct: 131 CATIGWSALQEILEK 145 >UniRef50_Q0BSI3 IscU protein n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BSI3_GRABC Length = 163 Score = 94.9 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 32/147 (21%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKV----NDEGIIEDAR 57 Y + ++ H + P + S P CGD + + I + ++E Sbjct: 16 LYHDLILRHGKKPLHGQRLP---VFSLSREADNPLCGDQVTVFIATGMPDDGNEVVEAVG 72 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEA-------------------------QAIKNTD 92 F+ GC +IAS+ L+ E V+G + +A A+ Sbjct: 73 FEAKGCAISIASADLMAETVRGLNRAQAHDVMKGFHALVRSGQVPDLECPVCHAALSRLQ 132 Query: 93 IAEELELPPVKIHCSILAEDAIKAAIA 119 + P +I C+ L A+ AA+ Sbjct: 133 PLGGVHEYPSRIKCATLPWRALSAALE 159 >UniRef50_D2RA02 SUF system FeS assembly protein, NifU family n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA02_GARVA Length = 233 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 30/133 (22%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKV------NDEGIIEDARFKTYGCGSAIASSSLVTE 75 + + +G P CGD + +++++ ++ I+ ++ +GC + AS S++ + Sbjct: 100 DENSALGQSHQFNPTCGDEVTMRVELSRSANNDETPIVSSIKWDGHGCSISQASLSMMVD 159 Query: 76 WVKGKSLDEAQAIK------------------------NTDIAEELELPPVKIHCSILAE 111 V+GKS+DEA + + + + + P++I C++LA Sbjct: 160 LVEGKSVDEALQLDALFHKLMESRGEGLQSEEDEDALEDAMVLQGVSRYPMRIKCALLAW 219 Query: 112 DAIKAAIADYKSK 124 + +K +IA + Sbjct: 220 EGLKDSIAKAMKE 232 >UniRef50_Q2LWF0 NifU-like protein involved in Fe-S cluster formation n=3 Tax=Syntrophus aciditrophicus SB RepID=Q2LWF0_SYNAS Length = 238 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%) Query: 8 IDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAI 67 + + NPR +N D +CGD M++ +K N +ED T GC + Sbjct: 27 LHYLLNPR----MENPDGIAKV----TGSCGDTMEIALKFNG-PRVEDVHCWTDGCAISK 77 Query: 68 ASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIADYKSK 124 V +GK++ E + I I E + LP +HC++LAE ++ A++ Y K Sbjct: 78 MCVETVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVLAETTLQKAVSFYTLK 135 >UniRef50_C7DHB6 Nitrogen-fixing NifU domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHB6_9EURY Length = 128 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%) Query: 13 NPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSL 72 N +N G + S + CGD + + + + D I+DA F+ GC + +A++ Sbjct: 16 NIKNRGKPAKFN---ASANLENTMCGDDVTVYLSIQDNR-IKDASFEGEGCSATVAAADA 71 Query: 73 VTEWVKGKSLDEAQAIKNTDIAEE--LELPPVKIHCSILAEDAIKAAIADY 121 + E++K K +DE + + + +++ P + C L A+KAAIA+Y Sbjct: 72 LMEFIKSKEVDEVVSFGSDFMESLLNVKIEPSRSRCVNLGLRAVKAAIAEY 122 >UniRef50_A6Q4J9 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4J9_NITSB Length = 159 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 5 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTYGC 63 K ++ NP N G D G G+++ + +K++ II++ +++T GC Sbjct: 10 PKYLELMLNPTNYGEMKEYD---AKGFGKNAQTGEMVVIYLKIDPISTIIKEIKWQTNGC 66 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKS 123 G+ + S +L +E KGK+L + + PP C + A AA+ DY++ Sbjct: 67 GTTLVSGALFSEEYKGKTLQSGVEFTQDVFEKIKDNPPEDAACGEVVARAFMAAVQDYEA 126 Query: 124 KREAK 128 ++ + Sbjct: 127 RKRGE 131 >UniRef50_A8F547 Nitrogen-fixing NifU domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F547_THELT Length = 119 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YSEK + P + D + V P GD +++ +K+ + +I+D FK Sbjct: 1 MTYSEKFKQLFMYPAHANQID----YTHTAEVVYPEHGDRVRIFVKL-ENFLIKDISFKA 55 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 GC IA+S + V GK+++ A I I +E++ + C + +A+K A++ Sbjct: 56 IGCPRVIAASEALCRLVNGKNINIALEINEEHIRQEMDFHDKEFKCIMAPVEALKKALSK 115 Query: 121 YKSK 124 +++ Sbjct: 116 LENE 119 >UniRef50_B2S3K5 Nitrogen fixation protein n=4 Tax=Treponema RepID=B2S3K5_TREPS Length = 147 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 25/131 (19%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++++ + + VG P+CGD + L IK + I D F G Sbjct: 7 YRQVLLEYARKQEHRRVLEGP---VGIERGHNPSCGDDLTLLIKREGDR-IADVAFLGTG 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQA---------------------IKNTDIAEELELPP 101 C + AS++++ E +KG S+ +AQ +++ I P Sbjct: 63 CAVSTASTNILIELIKGASVAQAQKTVALFFHMMAQQCLTDQERAHLQDACILACFASMP 122 Query: 102 VKIHCSILAED 112 +I C+ L+ Sbjct: 123 ARIKCATLSWH 133 >UniRef50_B8FIH0 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIH0_DESAA Length = 149 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS I N G + D+ V P CGD + + +++ + G ++ A+ Sbjct: 23 GYSATAIKFCNEQPNRGVLSDADQ---VSEVAGP-CGDSITVYLRIRE-GKVDRAKALVS 77 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAIKAAIAD 120 GC A+AS+ E VKGK+L EA AI+ DI LE LP K C L+ A+ A+ + Sbjct: 78 GCPGAVASAMAAMELVKGKTLTEALAIEEKDIVRMLEYLPDEKQDCIQLSAKALHKAVEE 137 Query: 121 Y 121 Y Sbjct: 138 Y 138 >UniRef50_C7ML19 SUF system FeS assembly protein, NifU family n=6 Tax=Bacteria RepID=C7ML19_CRYCD Length = 151 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 24/138 (17%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ +++H +P D+ S P+CGD + L +K+ + G++E+A F G Sbjct: 7 YTAALMEHNAHPDYKYQMDDPTM---SHQGINPSCGDDITLSLKI-ENGVVEEAAFVGSG 62 Query: 63 CGSAIASSSLVTEWVKGKSLD--------------------EAQAIKNTDIAEELELPPV 102 C + AS+ ++ + + ++++ E + + + + L P Sbjct: 63 CAVSQASADIMADLITDETVENARHLCDIFLRMIVGNATDAELEELGEAAQLKSIALMPA 122 Query: 103 KIHCSILAEDAIKAAIAD 120 ++ C+ L + Sbjct: 123 RVKCAELGWRTALTMLDQ 140 >UniRef50_C6MSR1 Nitrogen-fixing NifU domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MSR1_9DELT Length = 139 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 5/123 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 +S K+ DH NPRN G + D V G P GD + +K+ E + DARF Sbjct: 4 LFSTKIWDHARNPRNRGFLKDADVLV---QAGDPDKGDALLYLLKIEAEQ-VLDARFLAR 59 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIAD 120 G +A+A+SS+ TE GKSLDE AI++ I A LP K+HC +A A+ AA+ Sbjct: 60 GSATAVAASSVATELAIGKSLDEVLAIRHGAIAAALGGLPEDKMHCCQMAVSALHAAVQQ 119 Query: 121 YKS 123 Y+ Sbjct: 120 YRG 122 >UniRef50_A5ICQ0 NifU family iron binding protein, [Fe-S] cluster formation/repair protein IscU, HesB n=5 Tax=Legionella pneumophila RepID=A5ICQ0_LEGPC Length = 127 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 58/126 (46%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M Y++ V D++ P+++G D ND V + + IK + + +I ARFKT Sbjct: 1 MMYNKIVQDYFFQPQHIGKLDLNDPFVIGVQSQPINQLNTVHFYIKCDGDKLISKARFKT 60 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 G IA+ + ++GK+L+ I + L++ + ++ ED K A+ Sbjct: 61 NGNPYVIAAMEWICCQIEGKTLESLPLIDFQILINVLQITNNQYPVAVQVEDIYKEALTL 120 Query: 121 YKSKRE 126 + K E Sbjct: 121 MRKKFE 126 >UniRef50_Q048H8 Fe-S cluster formation protein, NifU-like n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q048H8_LACDB Length = 146 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 25/138 (18%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y ++D+ + + + + V + +CGD + LQ+KV + G IE G Sbjct: 10 YQAVLLDYAASQKYRQPLASPTKAV---SLVNESCGDRLTLQVKVKE-GKIEQVACLAEG 65 Query: 63 CGSAIASSSLVT-------------------EWVKGKSL--DEAQAIKNTDIAEELELPP 101 C + AS++++ ++GK + +E + + + + + + P Sbjct: 66 CTISQASAAIMAGLVDQAPLEKAAGLLPIFWRMLEGKEISQEEEKELGDAALLQGVSRFP 125 Query: 102 VKIHCSILAEDAIKAAIA 119 ++ C+ LA + AI Sbjct: 126 ARVKCAGLAWQGLSEAIE 143 >UniRef50_Q1AXD4 Nitrogen-fixing NifU-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXD4_RUBXD Length = 134 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 7/127 (5%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 ++++H NPR+ G + D ++ G+P CG + + +K + +G I F G Sbjct: 9 RLVEHARNPRHRGVIRDADVSMP---GGSPECGGSVVVYLKADGDGGIAGLSFTGQGDTI 65 Query: 66 AIASSSLVTE--WVKGKSLDEAQAIKNTDIAEELE--LPPVKIHCSILAEDAIKAAIADY 121 + ++ L E + L++ + EE+ + + + L IK A+ Y Sbjct: 66 SQGATDLAIEKILAERMGLEDVLGLSYDRFIEEVGRDVVGSRTRNATLGLSTIKNAVRKY 125 Query: 122 KSKREAK 128 + R + Sbjct: 126 RRDRGVR 132 >UniRef50_Q8F7C7 NifU-like protein n=6 Tax=Leptospira RepID=Q8F7C7_LEPIN Length = 263 Score = 91.0 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 9/123 (7%) Query: 7 VIDHYE------NPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 V+D + N ++ CGD ++ +K++ + DA + T Sbjct: 3 VMDFARYKQINDDRVNYREMEDATV---VSNYRNVGCGDGYRIYLKIDSSETVTDASYTT 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 GCG I + ++ TE+ KGK++++ ++I +TDI E P + + A A+ A+ D Sbjct: 60 TGCGFGIVALAMATEFAKGKTIEQLKSITSTDIEGMFEFPERRKNYPESAVAALLQAVRD 119 Query: 121 YKS 123 Y+S Sbjct: 120 YES 122 >UniRef50_C7JBP3 NifU family SUF system FeS assembly protein n=8 Tax=Acetobacter pasteurianus RepID=C7JBP3_ACEP3 Length = 150 Score = 90.7 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 26/142 (18%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y +++ P+ G + G P CGD ++ I + D I+ R T Sbjct: 11 LYDRVIVERARAPQYAGKLEAPSVQ---GEGKNPMCGDKTRVDIAL-DATHIQSVRHTTR 66 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT----------------------DIAEELEL 99 GC A++ L+ + V G + +A ++ ++ + L Sbjct: 67 GCAICAAAADLMAQQVSGLDVAQAVSLSGRFSAMLVGETSPAATADTSLGPLEVFQPLRS 126 Query: 100 PPVKIHCSILAEDAIKAAIADY 121 +I C+ L A+K A++ Sbjct: 127 HKARIRCAELPWIALKEALSHA 148 >UniRef50_Q14L11 Putative iron-sulfur cluster assembly protein n=1 Tax=Spiroplasma citri RepID=Q14L11_SPICI Length = 150 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 21/141 (14%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M + ++DHY P+ G V S + +C D + L++ + II ARF Sbjct: 9 MFLRQIIMDHYSEPQYKGLTKKPT--VYSIHQASESCIDDIYLELMIERNKIIS-ARFDG 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP------------------PV 102 GC + ASS ++ + ++GK++ + AI +A + P P Sbjct: 66 VGCAISTASSDIMAQELEGKAIKDGLAIIENYLAMVFDQPYDENKLNNLIAFINIAKQPN 125 Query: 103 KIHCSILAEDAIKAAIADYKS 123 +I C+ + + + D Sbjct: 126 RIKCATIGVTGFQTLLLDLLK 146 >UniRef50_Q6APN8 Related to nitrogen fixation protein (NifU) n=1 Tax=Desulfotalea psychrophila RepID=Q6APN8_DESPS Length = 136 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 2/91 (2%) Query: 37 CGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE 96 CGD M++ +++ D+ +E R+ + GC + +GK+++E + I + + Sbjct: 44 CGDTMEMSLRIRDDR-VEKTRYSSDGCSISQQCIEAAAMLAQGKTIEEVRKINMMHVIDI 102 Query: 97 LE-LPPVKIHCSILAEDAIKAAIADYKSKRE 126 + LP +HC+ LAE ++ AI DY K+ Sbjct: 103 VGDLPDSHLHCAQLAETTLQHAIGDYVQKQR 133 >UniRef50_A5G0T1 SUF system FeS assembly protein, NifU family n=2 Tax=Acetobacteraceae RepID=A5G0T1_ACICJ Length = 151 Score = 89.1 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 24/146 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y +++ P + G D P CGD + L++ G I + +T Sbjct: 10 LYQRLIMERARAPLHAGRPARFD---AEAEGDNPMCGDRVHLRLSCAG-GAIGEVWHETR 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTD-------------------IAEELELPPV 102 GC +AS+ L+ + V G+S A+ + + + Sbjct: 66 GCAICVASADLMADAVAGRSRAAAEELADAFEAMVATGAVPDREDFSELRALSGVHEYRS 125 Query: 103 KIHCSILAEDAIKAAIAD-YKSKREA 127 + C+ L A++AA+ ++ Sbjct: 126 RHRCATLPWQALRAALTKTMETGHGG 151 >UniRef50_Q65JA1 Fe-S cluster formation protein n=3 Tax=Bacillus RepID=Q65JA1_BACLD Length = 143 Score = 89.1 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 22/138 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++DH RN D + V P CGDVM L I + +E IEDA F Sbjct: 7 LYRSVIMDHARYRRNFRKIDKH--GVYYVHYKNPTCGDVMTLFIDIKNEK-IEDAAFIGD 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT-----------------DIAEELELPP--V 102 GC ++ASSS++TE +KGK+L EA ++ D + + P Sbjct: 64 GCSISMASSSIMTELIKGKTLKEAGLMREAMENMIRKGEEPEEDLLGDAVSLIGVHPLRA 123 Query: 103 KIHCSILAEDAIKAAIAD 120 + +C+++ A+ + Sbjct: 124 RHNCALMPWQALDRIKEN 141 >UniRef50_A6GEC3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEC3_9DELT Length = 691 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 24/137 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y E+++ H +P ++ P CGD +++ +V D G Sbjct: 4 LYHERLLAHAHDPCCGPVPEDPTV---EACATNPLCGDEVRVAARVED-GRFAALGCAVE 59 Query: 62 GCGSAIASSSLVTEWVKGKSL--------------------DEAQAIKNTDIAEELELPP 101 C +AS+S+++ ++ + + D A A + D+ L P Sbjct: 60 ACAVCVASASIMSALLREQPVSTLDEGLRALEAVVAGDAQLDSALAESDLDVFAALADYP 119 Query: 102 VKIHCSILAEDAIKAAI 118 + C+ L A++ A+ Sbjct: 120 SRRSCAFLPWRALEEAL 136 >UniRef50_A0JUB0 SUF system FeS assembly protein, NifU family n=6 Tax=Micrococcaceae RepID=A0JUB0_ARTS2 Length = 161 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 32/151 (21%) Query: 2 AYSEKVIDHYENPRNVGSF--DNNDENVGSGMVG-----APACGDVMKLQIKVNDEG--- 51 Y + +++H + R+ D E VG P CGD + L++++ G Sbjct: 7 MYQQLILEHAKA-RSGADLTADEATETPHQAGVGQCHQLNPVCGDEITLRLELEAAGNPP 65 Query: 52 IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQA---------------------IKN 90 ++ + GC ++AS+S+++E +G S DE + + Sbjct: 66 SVKGIHWHGDGCAISMASASILSELSEGASPDELSEMIDHFRELMRSRGRLEPDEEILGD 125 Query: 91 TDIAEELELPPVKIHCSILAEDAIKAAIADY 121 + P ++ C++LA A + A+ Sbjct: 126 AAALAGVAKYPARVKCAMLAWVAAEDALRQA 156 >UniRef50_B1VAA5 NifU homolog n=3 Tax=Candidatus Phytoplasma RepID=B1VAA5_PHYAS Length = 147 Score = 88.3 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 24/141 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND---EGIIEDARF 58 Y + ++ HY+ P+N G + D++ S +CGD + LQIK IED ++ Sbjct: 7 LYRDIIMKHYQEPQNWGL--SQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIEDIKY 64 Query: 59 KTYGCGSAIASSSLVT-------------------EWVKGKSLDEAQAIKNTDIAEELEL 99 KT C AS+SL++ + + LDE + K + + Sbjct: 65 KTQSCAICRASASLMSLYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFKHFCQ 124 Query: 100 PPVKIHCSILAEDAIKAAIAD 120 + C L A++ I Sbjct: 125 FQGRRVCVALPWQALEKIIQK 145 >UniRef50_C0GTN3 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTN3_9DELT Length = 139 Score = 88.3 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + +V ++NP + N+D +CG+ +++ + + E +I A F + G Sbjct: 24 FGPEVYRRWKNPDYMARMQNHDCMAAV----TGSCGNRVEIYLVLEQE-VIARATFFSEG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIA 119 CGS++ +S+ E +G++LD+A A+ D+ + L +P K H + LA A+ AI Sbjct: 79 CGSSVVCASMTCELARGRTLDQALALGAGDVMQALPGMPGSKKHYAALAVKALHRAIE 136 >UniRef50_C5BVY5 SUF system FeS assembly protein, NifU family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVY5_BEUC1 Length = 191 Score = 88.3 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 58/188 (30%), Gaps = 65/188 (34%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVN------------- 48 Y + ++DH G + G P CGD ++L++ ++ Sbjct: 7 LYQQVILDHARERHAYGLREGA---AGESFQVNPTCGDEVRLRVHIDFGSAGDGGIGGAD 63 Query: 49 --------------------------DEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSL 82 I ++ +GC + AS S++++ V G + Sbjct: 64 SFGGAGGGDVGSGVLTGAGASGREVSARPRISGVSWEGHGCSISQASISVMSDLVTGTDV 123 Query: 83 DEA-----------------------QAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 A + + + + P ++ C++L A++ A+A Sbjct: 124 LTADAFAESFRALMHHRGEPLGDSRDEELGDAAAFVGVAKYPARVKCALLGWMALRDALA 183 Query: 120 DYKSKREA 127 K E+ Sbjct: 184 HALVKEES 191 >UniRef50_A9KE69 IscU n=6 Tax=Coxiella burnetii RepID=A9KE69_COXBN Length = 119 Score = 88.3 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M YS++V+ ++ + G D +D +V G + G + +L ++ ++ II +A+F+ Sbjct: 1 MQYSKEVLHYFFENVHAGELDKDDPHVRYGEIATSTEGHLFRLYLRCQND-IITEAKFQA 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAI 118 YG A A+ V W +GK+ DEA + + I + L L +++H ++L E K + Sbjct: 60 YGSVVATAACEYVCRWAEGKTFDEANHLDSDQIQKALNLSSLQVHAALLIERLWKKTL 117 >UniRef50_A8ZSW4 Nitrogen-fixing NifU domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSW4_DESOH Length = 105 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 32 VGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNT 91 CGD +++ IK + IIE F GC + AS++ V +GK ++ A I Sbjct: 9 AKTGECGDTVEMFIKKGTDSIIEQVLFDIRGCRNTHASANAVAVLAEGKKIEAAWEITPE 68 Query: 92 DIAEELE-LPPVKIHCSILAEDAIKAAIADYKSKREA 127 + + LE LPP HC+ LA A A+AD +++ E+ Sbjct: 69 AVIDLLETLPPDHFHCAELAVGAFYLALADCRNQHES 105 >UniRef50_B5JQP0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQP0_9BACT Length = 143 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 30/140 (21%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++ H + P N + + + P CGD + + K ND+G + F Sbjct: 8 LYKQTLLAHSKQPLNNHALPDA----PHATLRNPLCGDEITVYQKTNDDGS-KQITFTAQ 62 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-------------------------AEE 96 C +AS+S++T+ + EAQ ++ + Sbjct: 63 ACTICLASASMMTQHLATLPTPEAQTFADSLVSIFQNAKKPNTQTPDLETLPGDLASLTG 122 Query: 97 LELPPVKIHCSILAEDAIKA 116 + P +I C+ L +A Sbjct: 123 VLAFPSRIRCATLPFEAYLK 142 >UniRef50_A1WM67 Nitrogen-fixing NifU domain protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WM67_VEREI Length = 130 Score = 88.0 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 6/114 (5%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 ++E ++ ++ +P D S +G P CGD +++Q+ V D G+I+ AR++ + Sbjct: 10 MFNEIIVKNFSDPAFASELDEA---TASIEIGNPVCGDRIRVQLDVTD-GLIKRARYQAW 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCSILAEDAI 114 GC +++A+ ++ + GK L N DI L L P + HC + A+ Sbjct: 66 GCATSLATGNVFCACIDGKPLSVVLDTSNDDIETMLGELEPSQHHCLEM-LRAL 118 >UniRef50_B3R0D5 NifU-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0D5_PHYMT Length = 146 Score = 87.2 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 23/142 (16%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDV-MKLQIKVNDEGIIEDARFKTY 61 Y ++ +Y +N +D + P CGD + LQIKV II D R++ Sbjct: 8 YRNLILKYYHKKQNKILL--SDSSYFCLKHENPFCGDDYIFLQIKVKSNMII-DFRYEIK 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDI-------------------AEELELPPV 102 GC I+S++ ++ +K K + E I N I + L Sbjct: 65 GCVICISSANFMSNELKNKHISEVIKISNNFINMLKGKKFNLDNINSDFQLFQFLVNIKS 124 Query: 103 KIHCSILAEDAIKAAIADYKSK 124 +++C+IL+ +A+ + + + K Sbjct: 125 RVNCAILSWEALLKLLKNVEFK 146 >UniRef50_C6XNB0 Nitrogen-fixing NifU domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNB0_HIRBI Length = 148 Score = 87.2 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 22/144 (15%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y +V++ N N N D GS + CG V+ + ++ EG I D F+ Sbjct: 6 YHNRVLELAANIPNAERLANPD---GSARKVSRVCGSVITADVNLDSEGKITDIGFEPEA 62 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPV-----------------K 103 C S S+++ KGK+L + AI++ + +E PP + Sbjct: 63 CVLGQTSCSVLSAHAKGKNLADIVAIRDAFKAMLKEGAPPPEGDFWELRHLEGVRDYPQR 122 Query: 104 IHCSILAEDAIKAAIADYKSKREA 127 ++LA +A+ AA+ K+ A Sbjct: 123 HTSTLLAFEALIAAMEAANEKQSA 146 >UniRef50_B5JY19 FeS cluster assembly scaffold IscU n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY19_9GAMM Length = 122 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Query: 8 IDHYENPRNVGSFDNNDENVGSGMVGAPACGD-VMKLQIKVNDEGIIEDARFKTYGCGSA 66 + H++ PRNVG D+ E VGS G G+ +++Q+ V D IE FK YG G+ Sbjct: 1 MAHFDQPRNVGELDDTQEGVGSACAGDAHRGEHQLRIQLYVGDSDCIEKTAFKAYGSGAV 60 Query: 67 IASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 IAS S TEW KGK+L + + + E L+L + ++ A+ A D + K+ Sbjct: 61 IASCSFATEWAKGKTLAQLSDLDAVALCEALQLEDSERGLAVQVCQALNRAGDDIEQKQN 120 Query: 127 A 127 A Sbjct: 121 A 121 >UniRef50_Q134L6 NifU-like protein n=68 Tax=Alphaproteobacteria RepID=Q134L6_RHOPS Length = 173 Score = 86.0 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 10/127 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++++I+ N +G D S + CG +K+ +K++ + ++ D + Sbjct: 31 YNKRIIELAGNIPRIGRLPAPD---ASATAHSKLCGSTVKIDLKMDGD-VVSDFAHEVKA 86 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTD--IAEELELPPVKIHCSILAEDAIKAAIAD 120 C ASSS++ V G + E +A+++T + +E PP AE A+ + D Sbjct: 87 CALGQASSSIMASHVVGSTSSELRALRDTVRKMLKENGAPPD----GKWAEIAMLEPVRD 142 Query: 121 YKSKREA 127 YK++ + Sbjct: 143 YKARHAS 149 >UniRef50_Q98AM0 Nitrogen fixation protein; NifU n=2 Tax=Mesorhizobium loti RepID=Q98AM0_RHILO Length = 153 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 10/131 (7%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKT 60 +S+K+ ++ NP NVG D + +G VGA ACGD +KL + + + I A F+T Sbjct: 10 LFSDKL--YFINPHNVGVLDIPN---AAGEVGAVACGDGLKLMMGFDPKTETITAATFQT 64 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELE-LPPVKIHCS---ILAEDAIKA 116 +G GSAI +SS +T+++ GK++DEA I + ++A+ L LPP I+ S ++ E ++ Sbjct: 65 FGRGSAITASSTITQFIVGKTIDEALQITDQEMADFLGALPPHTIYSSLDRLILERGLRL 124 Query: 117 AIADYKSKREA 127 + + R+A Sbjct: 125 MSEFFHAVRQA 135 >UniRef50_Q7NBI8 Putative uncharacterized protein n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBI8_MYCGA Length = 144 Score = 84.9 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 59/140 (42%), Gaps = 23/140 (16%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + +ID+Y+NP+N +D N + +C D L + + D+ ++ D +F GC Sbjct: 10 RQIIIDYYQNPKNFIKEPISDPNYKVIKTKSDSCADQFDLYLLIKDDLLV-DLKFSGSGC 68 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAI------------------KNTDIAEELELPPVKIH 105 + + +++++ K LDE + + + DI + + +I Sbjct: 69 IISQTTFDFLSKYLINKKLDEVKKLLSAYLEFIFKDVKNPLLAEEFDIFSSVHMQSNRII 128 Query: 106 CSILAEDAIKAAIADYKSKR 125 C+ + A+ +Y +K Sbjct: 129 CATINAKAL----NEYLTKE 144 >UniRef50_Q01180 Nitrogen fixation protein nifU n=6 Tax=Rhodobacter RepID=NIFU_RHOSH Length = 246 Score = 84.5 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 5/120 (4%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 K +D + NPRN G + D G G+ GD ++L +++ + G + +ARF +G Sbjct: 7 KALDLFFNPRNAGPLEAAD---AVGTAGSLEVGDAIRLMLRI-EAGRVAEARFLAFGGAH 62 Query: 66 AIASSSLVTEWVKGKSLDEAQAIKNTDI-AEELELPPVKIHCSILAEDAIKAAIADYKSK 124 AIA S +T V G L A+A+ +I A LP + + A A++ A+A Y+ + Sbjct: 63 AIACGSALTVLVTGLDLAAARAVTPEEIEAAVGGLPAPRRPAAARAWSALQIALAAYEGR 122 >UniRef50_B2IBC3 Nitrogen-fixing NifU domain protein n=23 Tax=Alphaproteobacteria RepID=B2IBC3_BEII9 Length = 159 Score = 84.5 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 10/128 (7%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+++++D N +G + D S + CG + + +K+ D G + D Sbjct: 15 LYNQQILDLAGNIPRLGRLEKPD---ASAKAHSKLCGSTIIVDLKMQD-GKVVDFAHDVK 70 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIA 119 C + A++S++ V G + E +A++ T + + PP A+ A+ + Sbjct: 71 ACALSQAAASIMARHVIGSTGPELRALRETMRAMLKANGAPPE----GRWADFAVLEPVR 126 Query: 120 DYKSKREA 127 D+K++ + Sbjct: 127 DFKARHTS 134 >UniRef50_A0LNT2 Nitrogen-fixing NifU domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNT2_SYNFM Length = 154 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%) Query: 13 NPR--NVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 NPR G S V P CG+ M++ +++ ++ I+ D F T GCG + A Sbjct: 31 NPRQIKFGKLPKATS---SAKVTGP-CGETMEIHLEIQEDEIV-DGSFVTDGCGPSKACG 85 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAEDAIKAAIADY 121 L G++LD+A I+ I + + +LP HC+ LA ++ AI ++ Sbjct: 86 FLAVMLAIGRNLDDAAMIEGDTILDMIEDLPEDHHHCAYLAAATLQTAIHNH 137 >UniRef50_C6N0B9 NifU family iron binding protein n=2 Tax=Legionella RepID=C6N0B9_9GAMM Length = 131 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 M Y+ V D++ +PR+VG + N + V G ++ ++ + +I+ FKT Sbjct: 1 MIYNNTVCDYFFSPRHVGIIELNHDLVVVFKNKQKGQG-TIEFYMQCGQDRLIQKVCFKT 59 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD 120 G IA + +KG++LD+ I + +EL++P + ++ K ++ Sbjct: 60 NGNPYLIAGLEWLCRQLKGRALDKVPKIDYQLLIKELDIPVTQYPLALRVVHVFKESLIL 119 Query: 121 YKSK 124 ++ Sbjct: 120 MNNR 123 >UniRef50_Q8EV25 Nitrogen fixation protein NifU n=1 Tax=Mycoplasma penetrans RepID=Q8EV25_MYCPE Length = 148 Score = 82.2 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 22/138 (15%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGA---PACGDVMKLQIKVNDEGIIEDARFKT 60 + ++DHYE P N S D + + +C D + L +K + GII D +F Sbjct: 12 RKLILDHYEIPDNKISEDEASKLNDIYVSFNNRTASCIDNLTLYLK-EENGIIVDVKFSG 70 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNT------------------DIAEELELPPV 102 GC + AS+ + +K K +++ + + + + Sbjct: 71 IGCAISTASTDIFCTMIKNKKVNDISDLIRKYFNMIDGDSFNEEELQYLSVFKNISKQLN 130 Query: 103 KIHCSILAEDAIKAAIAD 120 +I C+ + AI+ + Sbjct: 131 RIKCAKVGIVAIEQLVTK 148 >UniRef50_B8EQR5 Nitrogen-fixing NifU domain protein n=2 Tax=Rhizobiales RepID=B8EQR5_METSB Length = 149 Score = 81.8 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 10/127 (7%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ ++++ N +G D + + CG + + I V G I D Sbjct: 6 YNSRILELAGNIPRLGRLAAPD---ATAKAHSRLCGSTVIVDI-VMKNGKIVDFAHDVKA 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN--TDIAEELELPPVKIHCSILAEDAIKAAIAD 120 C A++S++ V G + E +A+++ + +E PP AE A+ + D Sbjct: 62 CALGQAAASIMARHVIGATAPEIRALRDRMRAMLKENGAPPD----GKWAEAAVLEPVRD 117 Query: 121 YKSKREA 127 YK++ + Sbjct: 118 YKARHAS 124 >UniRef50_A8PKG9 NifU-like protein, putative n=1 Tax=Brugia malayi RepID=A8PKG9_BRUMA Length = 79 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 36/58 (62%), Positives = 52/58 (89%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARF 58 ++YSEK++DHYENP+NVGS D ND +VG+G++GAP+CG+V++LQI VND+ +IED +F Sbjct: 8 ISYSEKILDHYENPKNVGSLDKNDPSVGTGLIGAPSCGNVIELQINVNDKDVIEDEKF 65 >UniRef50_B1AJ94 SUF system FeS assembly protein, NifU family n=15 Tax=Ureaplasma RepID=B1AJ94_UREP2 Length = 155 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 19/141 (13%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++ HYE+P+N F ++ N S CGD + + +K+N + II D F GC Sbjct: 13 RKIIMQHYEHPKNKVCFVQDEINYLSYHNTTEGCGDDITVYVKLNHQKII-DVVFLGTGC 71 Query: 64 GSAIASSSLVTEWVKGKSLD-------------EAQAIKNTDIAEELELPP-----VKIH 105 +I+S+ ++ E VK L+ E + E + +I Sbjct: 72 AISISSTDIICELVKNLDLNNALLLINNYLNMIEGLDYNKDIMQELIAFYNVKKQMNRIR 131 Query: 106 CSILAEDAIKAAIADYKSKRE 126 C+ + A+K + + K + Sbjct: 132 CARIGASALKMCLKQFTDKHK 152 >UniRef50_C4XEA9 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA9_MYCFE Length = 145 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 60/138 (43%), Gaps = 27/138 (19%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + +++HY PR+ + + +C D ++ ++ + + IED +F GC Sbjct: 12 RQIIMEHYLKPRH-----KSSSLKNKIIKHGESCADYLECELNIKNNQ-IEDIKFDGQGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDE---------------------AQAIKNTDIAEELELPPV 102 IAS+ L+ + +KGK +DE + ++ I + ++ Sbjct: 66 AFFIASTDLLIDLLKGKKIDESICLIELYEKFILDEKLNENDIEKLETLAIFDNVKTQFN 125 Query: 103 KIHCSILAEDAIKAAIAD 120 +++C+++ AIK + D Sbjct: 126 RVNCALMLARAIKEKLQD 143 >UniRef50_Q0A8C0 Nitrogen-fixing NifU domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8C0_ALHEH Length = 144 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 21/122 (17%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y + ++DHY +PR G ++ G CGD ++L + ++ + + F Sbjct: 4 LYRDIILDHYRHPRRFGPVEHF---PLRGEARNALCGDELQLGLALSGDR-VSAMGFHGR 59 Query: 62 GCGSAIASSSLVTEWVKGKS----------LDEAQAIKNTDI-------AEELELPPVKI 104 GC +A++SL E + G S LD A + + L P + Sbjct: 60 GCAVCMAAASLCCERLPGTSAARLALWPAQLDAALKRNDDGLLPAPLEPLTLLRAYPARH 119 Query: 105 HC 106 C Sbjct: 120 RC 121 >UniRef50_A8S193 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S193_9CLOT Length = 135 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY--GCGSAIASSSLVTEWVKG 79 +G+G P+C DV+ + E +I + C + A + V+G Sbjct: 18 KPQTCMGTGACQDPSCRDVLTYYFSADRE-LITSISYTITETSCFPSKACAETAAALVRG 76 Query: 80 KSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAIADYKSKRE 126 + + EA I ++ IA L P +HC+++AE A+K A+ DY KR+ Sbjct: 77 RPVLEAYTIDSSAIATALGGLEPEYMHCAMMAELALKRAVLDYAGKRK 124 >UniRef50_C8WNS3 Nitrogen-fixing NifU domain protein n=3 Tax=Coriobacteriaceae RepID=C8WNS3_EGGLE Length = 166 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDV-MKLQIKVN-DEGIIEDARFK 59 YS+ ++ N RN G+ + + MVG G+V ++L ++ D A FK Sbjct: 3 GYSDTLLSVVANFRNGGAPEGFN---AQSMVGKSKRGEVALRLFAVIDHDTRTFVRAGFK 59 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP-VKIHCSILAEDAIKAAI 118 T GC + +S+V ++G + DEA AI D+ L+ P K++ A +A++A I Sbjct: 60 TRGCLAVTGCASVVCSMLEGCTFDEALAITTDDVKTALDGVPVDKVYTIHFAIEAVRALI 119 Query: 119 ADYKSKREA 127 DY ++ A Sbjct: 120 GDYLVRQGA 128 >UniRef50_C4XLN0 Nitrogen-fixing NifU-like N-terminal domain protein n=2 Tax=Desulfovibrio RepID=C4XLN0_DESMR Length = 164 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Query: 11 YENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS 70 + + N + +CGD + + + V+ E + A T GC S++ ++ Sbjct: 37 WRDAPNRARLEAPTTIGTV----KGSCGDTITINLLVSGER-VTAADCDTDGCASSLIAA 91 Query: 71 SLVTEWVKGKSLDEAQAIKNTDIAEELELPP-VKIHCSILAEDAIKAAIADYK 122 GK+LDEA I + + P HC+ LA A++ A+ + Sbjct: 92 VTAASLAVGKTLDEAVDIDEAAVVAAVGRFPDDDRHCAYLAAAAVREAVHRWM 144 >UniRef50_C0QB63 Putative nitrogen fixation protein NifU (NifU-like protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QB63_DESAH Length = 151 Score = 78.7 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 15/121 (12%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT 60 MA+ + ENP G CGD ++ + + G++ + Sbjct: 20 MAFKTDFQERVENPDGHGR-------------RTGECGDTVEFFL-MATNGVLTSITYDV 65 Query: 61 YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVK-IHCSILAEDAIKAAIA 119 GC + A ++ V GK++D A I + D++ L+ P HC+ LA A A+ Sbjct: 66 DGCKNTNACANTVVHLATGKTVDAAWNITHEDVSAFLKTLPAHDTHCAELAVGAFYLALK 125 Query: 120 D 120 D Sbjct: 126 D 126 >UniRef50_Q6KIL2 Aminotransferase protein U homolog n=1 Tax=Mycoplasma mobile RepID=Q6KIL2_MYCMO Length = 142 Score = 77.9 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 25/141 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 ++ ++ HY +P N + + N S + +C D + L +K+ ++ ++ DA+F+ GC Sbjct: 9 TDIIMKHYSSPIN--KVEEIETNSKSIYRHSASCVDEINLNLKIENDFLV-DAKFQGVGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNT------------------DIAEELELPPVKIH 105 ++S+ + E +K K L + I N I E +++ ++ Sbjct: 66 AVFLSSADIFLEEIKNKPLSKVNEIANAYFDLINKKESNNLKIGKLAIFENVKIHLNRLE 125 Query: 106 CSILAEDAIKAAIADYKSKRE 126 C+ L I A D+ K + Sbjct: 126 CASL----IYQAYNDFLEKHK 142 >UniRef50_Q98R36 NITROGEN FIXATION PROTEIN NIFU n=1 Tax=Mycoplasma pulmonis RepID=Q98R36_MYCPU Length = 144 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 23/137 (16%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++ HYE P N D N + + + + +C D + ++++++ I+++ F GC Sbjct: 10 RKLIMKHYEFPIN---LDKNLDEKTANQIYSSSCADSISIKLEIDKN-IVKNISFNGSGC 65 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAI-------------------KNTDIAEELELPPVKI 104 I+S+ L+ E +K K++DE I N I E ++ + Sbjct: 66 AIFISSTDLLLEQIKNKNIDEVLDIIENYKNMINAKENVKDDKLGNLVIFENVKKHLNRA 125 Query: 105 HCSILAEDAIKAAIADY 121 C+ L D I+ + + Sbjct: 126 KCASLTADFIEEKLKKH 142 >UniRef50_B6BJX3 Putative NifU-like N terminal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJX3_9PROT Length = 159 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 4/120 (3%) Query: 8 IDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAI 67 ++H +P+N G +N + VG G+ + + ++ E II+D +F T GC + Sbjct: 19 LEHLMDPKNYGKLENAN-CVGVGLDEKTK--EYVIFYTLLDGE-IIKDVKFATNGCQDTV 74 Query: 68 ASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREA 127 S+ T+ +K L+ A + + P + C+ + A A++ ++++ + Sbjct: 75 VIGSMFTQMIKSNDLEYANGAIQKMNEKLGSMTPQQKVCADIVFTAFIASMKNFENIQNG 134 >UniRef50_UPI00017430E0 nitrogen fixation protein (nifU) n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017430E0 Length = 96 Score = 75.6 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y + ++++ +N P CGD + L+IK ++ II DA F G Sbjct: 7 YQQTILEYSRRRELNREIENPTFA---ERGHNPNCGDDLTLEIKTDENDIIIDAAFIGSG 63 Query: 63 CGSAIASSSLVTEWVKGK 80 C + AS +++ + K K Sbjct: 64 CAISTASMAMLIDLDKRK 81 >UniRef50_B4RE93 NifU-like protein involved in Fe-S cluster formation n=23 Tax=Alphaproteobacteria RepID=B4RE93_PHEZH Length = 149 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 10/128 (7%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS +++ + G D +V A CG + + +KV D G + D Sbjct: 5 LYSARLLRLAAEIPHAGRLPAPDASV---EKVAKLCGSRVVVDVKVED-GRVADFAQDVK 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIA 119 C A++S++ V G SL E ++ ++ + ++ PP ++ A+ A + Sbjct: 61 ACALGQAAASVLGAQVIGASLSELESARDQFRAMLKDGGPPPE----GRFSDLAMLAPVK 116 Query: 120 DYKSKREA 127 DY ++ + Sbjct: 117 DYPARHAS 124 >UniRef50_Q0YR11 Nitrogen-fixing NifU-like:BFD-like (2Fe-2S)-binding region n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR11_9CHLB Length = 161 Score = 75.2 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA-EELELPPVKIHCSILAEDAIKAAI 118 TYGC SAIAS+S+++E VKG++LD+A I ++A E LP KIHCS+L + A++AAI Sbjct: 25 TYGCASAIASTSVLSEMVKGRTLDQAFNISPKEVALELGGLPDNKIHCSVLGDKALRAAI 84 Query: 119 ADYKSKRE 126 DY ++ Sbjct: 85 NDYYTRNG 92 >UniRef50_C6ADY4 Nitrogen-fixing NifU-like protein n=5 Tax=Bartonella RepID=C6ADY4_BARGA Length = 142 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 54/131 (41%), Gaps = 18/131 (13%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y++K++ + + +G +N D + A CG + + +KV + GI+ D + + Sbjct: 6 YNDKILKYAAHIDKIGRLNNPD---ATSRKHAHLCGSTITVDLKV-ENGIVTDFAHEIHA 61 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN---TDIAEELELPPV---KIHCSILAEDAIKA 116 C AS+SL+ + G++ + + ++ + + P C Sbjct: 62 CVLGQASASLLASHIIGQTTQDLKKLREVIYQMLTQNGPSPQAPFEDFSC--------LQ 113 Query: 117 AIADYKSKREA 127 I DYK + A Sbjct: 114 PIKDYKVRHAA 124 >UniRef50_C0D022 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D022_9CLOT Length = 136 Score = 72.5 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 7/128 (5%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT--Y 61 EK+I + E N+G + +G G P CGDV+ + + E II + RF Sbjct: 3 REKIILYSEKTENLGE---PELFLGRGEAREPGCGDVLAMFVDTRRE-IITECRFTITES 58 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEE-LELPPVKIHCSILAEDAIKAAIAD 120 C A ++ E GK + EA I ++E L IHC+ +AE A+K + D Sbjct: 59 ACPPLKACAARAAELALGKPVMEAYLISADALSEFFGGLEQESIHCAQMAEIALKRTLKD 118 Query: 121 YKSKREAK 128 Y +R + Sbjct: 119 YAVRRADR 126 >UniRef50_Q3KKX4 NifU n=8 Tax=Chlamydia RepID=Q3KKX4_CHLTA Length = 260 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 12/125 (9%) Query: 8 IDHYENPRNVGSF----DNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTYG 62 + + P++ G+ ++ + + G G G+ + V+ GII +A+F+ +G Sbjct: 19 LRFFFQPKHGGALSHDQEDEEIQLVIGKQGHLLMGNTLLFYWLVDKTNGIIREAKFQYFG 78 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELP-------PVKIHCSILAEDAIK 115 + + V GK+ EA I D+ +E+ L DA+ Sbjct: 79 HPYLLVLAEATCSLVIGKTFAEAYKITINDLDQEVRGHAHPSIFLEDLSPLYHLVIDALD 138 Query: 116 AAIAD 120 AI Sbjct: 139 IAIEQ 143 >UniRef50_A8TRY7 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRY7_9PROT Length = 144 Score = 71.8 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 54/127 (42%), Gaps = 10/127 (7%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++++ + R++G ++ S V P CGD + + + + ++ I D K Sbjct: 5 LYQAEILELAKQGRSIGRLESPTV---SARVDNPICGDRITVDLAITEDR-ITDVGAKVQ 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIK--AAIA 119 GC A+++++ G +D+ ++++ A + L + A + Sbjct: 61 GCALCQAAAAIIAIESIGTDVDQLTRVRDSVAAYLAGTTAE----AALPWTRLANFAPVR 116 Query: 120 DYKSKRE 126 D +S+ + Sbjct: 117 DARSRHD 123 >UniRef50_C7MLZ4 NifU-like protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLZ4_CRYCD Length = 175 Score = 71.4 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDV-MKLQIKVNDEG-IIEDARFK 59 YS++++ N RN G + + GM G G+V ++ ++ I+ F+ Sbjct: 12 GYSDRLLTVVANFRNSGIPEGCN---ARGMAGKSKHGEVACQIFAVIDPATYTIDRIGFR 68 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP-VKIHCSILAEDAIKAAI 118 + GC + A +S + G ++ A I D+ L+ P K A +A+ +AI Sbjct: 69 SRGCLAMTACASQLCVMAHGLPIERALTITVADLKRTLDGVPTEKQDTPAFAIEALHSAI 128 Query: 119 ADYKSKREA 127 D+ ++ Sbjct: 129 GDFLLEQGG 137 >UniRef50_A3UF02 NifU-related protein involved in Fe-S cluster formation n=2 Tax=Hyphomonadaceae RepID=A3UF02_9RHOB Length = 142 Score = 71.4 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 12/128 (9%) Query: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 Y+ +++ + ++G + D GS + CG + L +KV D G I D + Sbjct: 5 YTNDLLELAADILHIGRLPDPD---GSASRVSRICGSELTLDLKVAD-GRIADLGLEVKA 60 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT---DIAEELELPPVKIHCSILAEDAIKAAIA 119 C AS+S+ G L+E + + + E P + A A++ A A Sbjct: 61 CALGQASASVFARAALGADLEEIRVTREALRLMLKEGAPAPNGRFS----ALKALQPA-A 115 Query: 120 DYKSKREA 127 Y+ + + Sbjct: 116 SYRQRHGS 123 >UniRef50_Q5P5Y4 Possible NifU homolog n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5Y4_AZOSE Length = 137 Score = 70.6 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 21/136 (15%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y++++ + G D GS M +P CGD ++++++V D G I + Sbjct: 5 LYNQRIKELAAAACGAGRLDAPS---GSAMRDSPVCGDRVRMEVRVAD-GRIVALAHEVK 60 Query: 62 GCGSAIASSSLVTEWVKGKSLD--EAQAIKNTDIAEELELP----------PVKIH---- 105 GC A++S++ G S EA + E P PV+ H Sbjct: 61 GCLLCRAAASVIGLHGVGLSAADSEALRAGVAAMLAGGERPDGWTELAVFEPVRQHRSRH 120 Query: 106 -CSILAEDAIKAAIAD 120 C ++ +A+ A+A+ Sbjct: 121 GCVLIPFEALAKAVAE 136 >UniRef50_A4WRP9 NifU-like protein n=20 Tax=Rhodobacterales RepID=A4WRP9_RHOS5 Length = 146 Score = 69.9 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 14/130 (10%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS ++++ + ++G GS +P CG ++ + + ++D G + D Sbjct: 9 LYSGRILELAADIPHIGRLAEPQ---GSARRRSPVCGSMVTVDLSLSD-GRVADFAQDVK 64 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAI- 118 C AS+S++ + G+S E + ++ + P + + I Sbjct: 65 ACALGQASASIMGRALLGRSRAEIEGARDALKAMLTAEGPVPAP------PFEGYEVLIP 118 Query: 119 -ADYKSKREA 127 DY+++ + Sbjct: 119 ARDYRNRHAS 128 >UniRef50_B0T0Z9 Nitrogen-fixing NifU domain protein n=2 Tax=Alphaproteobacteria RepID=B0T0Z9_CAUSK Length = 153 Score = 69.9 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS +++ N G D S A CG + + + V D G + D Sbjct: 5 LYSARILGLVANMPRAGRLAAPD---ASSEKTAKLCGSRITVDVTVED-GKVSDFAQDVA 60 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIA 119 C AS++++ V G L E + ++ + + PP +E A+ + Sbjct: 61 ACALGQASAAILGAQVVGADLSEIELARDALHAMLKSGGPPPE----GRFSELAVLEPVK 116 Query: 120 DYKSKREA 127 DY ++ + Sbjct: 117 DYPARHAS 124 >UniRef50_Q4A687 Nitrogen fixation protein NifU n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A687_MYCS5 Length = 147 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 + ++DHY NPR+ + + + C D + + + D+ + +D + T GC Sbjct: 14 RKIIMDHYVNPRHF-----DKNILEKNVFYNNTCSDKLVVNATIEDKKL-KDIKHYTQGC 67 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKN 90 +S+S+ + ++ K+L EA I N Sbjct: 68 LICASSASIFIDQIQNKNLSEAFEINN 94 >UniRef50_B0RHZ4 Putative uncharacterized protein n=2 Tax=Clavibacter michiganensis RepID=B0RHZ4_CLAMS Length = 177 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 41/156 (26%) Query: 4 SEKVIDHYENP-RNVGSFDNNDEN----VGSGMVGAPACGDVMKLQIK------------ 46 S+ + P R V D + +GS CGDV+ L++ Sbjct: 22 SDAALRAASAPGRFVAEPDAATPSAGVVLGSSEQRNATCGDVVDLRVLAVDPAHPSVDAG 81 Query: 47 --VNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQ------------------ 86 V+ I R+ GC + AS+S++ E V+G++ EA Sbjct: 82 AAVDPAEPIA-VRWHGRGCTVSQASASMLAELVEGRTAAEAAALVVELRALIRSHELLPG 140 Query: 87 ---AIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 + + + P++ C++LA A++ A+A Sbjct: 141 AEDRLGDAFALADSGRYPLRGTCALLAWHALEEALA 176 >UniRef50_Q0FGM6 NifU-related protein involved in Fe-S cluster formation n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FGM6_9RHOB Length = 147 Score = 68.3 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 57/141 (40%), Gaps = 23/141 (16%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS+++++ N + G+ +P CG +++ I VN+ G I D Sbjct: 10 LYSKRILEFAGNIPFTTPLE---IYSGTASRRSPMCGSNLQVWINVNE-GKITDFSHDVK 65 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT---DIAEELELPP----------------V 102 C ASSS++ E + G +D+ + ++ + + +P Sbjct: 66 TCALGQASSSIIAEKIIGLGIDQVKLGRDQLYNMLTKNGPIPQKPFENLEVLIPAITYKN 125 Query: 103 KIHCSILAEDAIKAAIADYKS 123 + +L+ +AI A ++ K+ Sbjct: 126 RHASIMLSFEAIIDAFSNIKN 146 >UniRef50_D1J7R1 Aminotransferase protein U homolog (Nitrogenfixation protein NifU) n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7R1_MYCHP Length = 149 Score = 68.3 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 52/139 (37%), Gaps = 22/139 (15%) Query: 4 SEKVIDHYENPRNVGSF-DNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 + D YENP+ ++ + + + C D +KL +++ ++ + G Sbjct: 10 QRIIFDAYENPKFKIKNDEDFKKTDKTLFEHSNVCVDDIKLNFLFDEKNTLKKVEYCAKG 69 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKNT---------------------DIAEELELPP 101 C ++S L+ + + K+ E I N + + + + Sbjct: 70 CSIFLSSVELMIQQILNKNKLEINEILNEYKTMIDTSTISQRGGEILGKLVVYQNVRVHL 129 Query: 102 VKIHCSILAEDAIKAAIAD 120 ++ C+ + IK A+++ Sbjct: 130 NRLECASIIFRLIKKAVSN 148 >UniRef50_B3PM56 IscU, NifU-like protein involved in Fe-S cluster formation n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM56_MYCA5 Length = 147 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 60/143 (41%), Gaps = 27/143 (18%) Query: 4 SEKVIDHYENPRNVGS-FDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 62 E +++ Y NPR +++ + C D +++ + + I++DA++ G Sbjct: 10 QELIMEAYLNPRYRVEDLKDSN----IIKENSLVCVDEIQIALT-WENSILKDAKYLGKG 64 Query: 63 CGSAIASSSLVTEWVKGKSLDEAQAIKN---------------------TDIAEELELPP 101 C ++S ++ +K ++L+E + I + I E +++ Sbjct: 65 CAIFLSSIEIMLAQIKDRTLNEIETILDLYLAMLNGKKLVEEEQEKLGKLIIFENVKVHL 124 Query: 102 VKIHCSILAEDAIKAAIADYKSK 124 ++ C+ + IK + D ++K Sbjct: 125 NRLECASIIYRVIKKGLVDARTK 147 >UniRef50_D2LAE9 Nitrogen-fixing NifU domain protein n=2 Tax=Desulfovibrio RepID=D2LAE9_9DELT Length = 120 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 29 SGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAI 88 GM ACG +K+Q+ +ND+ +I +A CG + + + E V+G S+ +AQA+ Sbjct: 23 EGMSECSACGRAVKMQLLINDD-VIVEAGGSVESCGYSRECMAALIETVRGMSVYDAQAV 81 Query: 89 KNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREA 127 D + K+ C A++ A+ +Y+ + A Sbjct: 82 STEDFQPRMTRVIEKLGCDNWCVAALRIALRNYRIREAA 120 >UniRef50_Q6MEW2 Putative iron-sulfur cluster assembly protein nifU n=2 Tax=Parachlamydiaceae RepID=Q6MEW2_PARUW Length = 263 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Query: 3 YSEKVIDHYENPRNVGSFDNNDEN-----VGSGMVGAPACGDVMKLQIKVN-DEGIIEDA 56 YS+K++ + PR +G F+ + G G A G+ + L V+ D+GII DA Sbjct: 15 YSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDA 74 Query: 57 RFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV 102 +F+ YG + I ++ + E V GK+ D+A+ I + +++ P Sbjct: 75 KFQAYGQSALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKPD 120 >UniRef50_Q30UA2 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30UA2_SULDN Length = 181 Score = 66.0 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 26/146 (17%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 ++ H P N G ++ +G G+ + + + IK DE I D F T G Sbjct: 8 QAEIGKHLMQPENYGKLEDAS-CIGVGIDHSRK--SYVIMYIK-RDETTILDVMFGTNGT 63 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP---------------------- 101 S+ T+ +KG+S++ AQ I +T E E Sbjct: 64 QDTTTLGSIFTDMIKGESIESAQEIADTLNKELQESYASIPAPKVDLSKPEGEQVERVST 123 Query: 102 VKIHCSILAEDAIKAAIADYKSKREA 127 + + A AA+ ++ K Sbjct: 124 EHQDSANMVLTAFNAAMRHFERKEGG 149 >UniRef50_D0XJK8 NifU-like protein involved in Fe-S cluster formation n=3 Tax=Caulobacteraceae RepID=D0XJK8_9CAUL Length = 151 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 11/129 (8%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS +++ N + G + G+G A CG + + ++ +G + Sbjct: 5 LYSARILTLAANLPHAGRLTAPE---GTGDRTAKLCGSRAIVDVTLDADGRVAGFAQDVK 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIA---EELELPPVKIHCSILAEDAIKAAI 118 C A++ ++ E V G S E +A ++ +A + P + A+K + Sbjct: 62 ACALGQAAAGVLGEAVIGASDAELRAARDAMLAMLKSGGDGPDGRFE----GLRALKQ-V 116 Query: 119 ADYKSKREA 127 A Y ++ + Sbjct: 117 AAYPARHAS 125 >UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3185B Length = 519 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 5/107 (4%) Query: 10 HYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFKTYGCGSAIA 68 H + G E +G+ G CGDV++L + ++ G + + ++ CG+ +A Sbjct: 17 HLASAHGRGR---APEGGATGVAGTRLCGDVVRLTLALDPSGQRVAEVGWEAEACGATLA 73 Query: 69 SSSLVTEWVKGKSLDEAQAIKNTDIAE-ELELPPVKIHCSILAEDAI 114 + S V+E V L + I +A+ L K H + L DA+ Sbjct: 74 ACSAVSELVADAPLLDVARIGAHQVADALGGLSAGKFHAAELVADAL 120 >UniRef50_A5V259 NifU-like involved in Fe-S cluster formation n=2 Tax=Sphingomonas RepID=A5V259_SPHWW Length = 172 Score = 65.2 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 36/90 (40%), Gaps = 3/90 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+ +++ + + + V +P CG + + + ++ EG + + Sbjct: 32 LYNARILRLATSIPHQARLADAQATVSR---RSPVCGSRVTVDVVMDGEGRVAALGQEVR 88 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT 91 C AS++L+ G++ E A ++ Sbjct: 89 ACALGQASAALMGAHAIGRTPAELAAARDA 118 >UniRef50_Q256A8 NifU-related protein n=7 Tax=Chlamydophila RepID=Q256A8_CHLFF Length = 273 Score = 65.2 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 16/126 (12%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVG-----SGMVGAPACGDVMKLQIKVND-EGIIEDAR 57 S KV+ + G+F D G G G+ + ++ G I DA+ Sbjct: 15 SPKVMKKFHKFYCGGTFSAEDAETKGACLIIGSQGHRLTGNYVIFYWLIDKVNGKIIDAK 74 Query: 58 FKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVK----------IHCS 107 F+ +G + + V GK+ +A + +I EL P K HC Sbjct: 75 FQYFGHPFLLVLAETACNLVIGKTYAQAYNLTVNNIDTELRSHPNKPALPESSAALYHCI 134 Query: 108 ILAEDA 113 I A D Sbjct: 135 IDAIDT 140 >UniRef50_UPI0000D53F18 NifU-like N terminal domain n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D53F18 Length = 133 Score = 64.8 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 22/132 (16%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 ++ N +N P CGD + +++ +N I D ++ C Sbjct: 5 ILKIASNTKNFKDIKKY---THYSKSKNPLCGDEIHIKLVIN-NQKITDFGYQGKSCIYC 60 Query: 67 IASSSLVTEWVKGKSLDEAQAIKN-----------------TDIAEELELP-PVKIHCSI 108 A++S+++ + + + + +A+ L + C + Sbjct: 61 QATASILSNKLINFKTIKIRDLCEYANTYFSGNKSNLKKEWRFVAKLLSQKNAARKECIL 120 Query: 109 LAEDAIKAAIAD 120 L +A++ + Sbjct: 121 LPFNALEKIVTK 132 >UniRef50_Q1V286 NifU-like N terminal domain protein n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V286_PELUB Length = 132 Score = 64.8 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 26/134 (19%) Query: 6 KVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGS 65 ++++ N N N + P CGD M++++ V ++ I+D ++ C Sbjct: 4 RILEIASNTANHKIVKN---HTHHSKNKNPLCGDEMEIRLIVKNDK-IKDMGYQCRSCVY 59 Query: 66 AIASSSLVTEWVKGKSLDEAQAI--------------------KNTDIAEELELPPVKIH 105 AS S++++ + +++ + +++ +I + + + Sbjct: 60 CQASVSMLSQKIIDQNISDIKSLIISIEGLFNETDIKIEKKWNDFKEIMNKDNI--SRKE 117 Query: 106 CSILAEDAIKAAIA 119 C +L I A+ Sbjct: 118 CLLLPFKTISKALK 131 >UniRef50_Q3A7R9 NifU-like protein n=2 Tax=Desulfuromonadales RepID=Q3A7R9_PELCD Length = 335 Score = 64.8 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 1 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEG-IIEDARFK 59 + Y++ + + R + GM G + ++ V+ +G +I D ++ Sbjct: 2 LLYTDTIRRWATDYRRCRDLTDPHGTGEVGMAHGEE-GTRIAVRFTVHLQGALITDVGYQ 60 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL-ELPPVKIHCSILAED 112 +GCG ++A+ + E K+L A AI + + L LPP + +C+ LA + Sbjct: 61 VFGCGYSMAACAAAAELACNKNLPSAMAIDASQVDALLDGLPPERSYCADLAVE 114 >UniRef50_A8TTN5 Nitrogen-fixing NifU-like protein n=2 Tax=alpha proteobacterium BAL199 RepID=A8TTN5_9PROT Length = 144 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 24/137 (17%) Query: 3 YSEKVIDHYENP-RNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y ++++D R+ SG + ACG +K+Q+ ++ I D + Sbjct: 8 YQDRLLDLAATIVRDGHVIPEP---TASGSAYSRACGSRIKVQVVLDGSR-ITDYGQQVD 63 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQ--AIKNTDIAEELELPP-----------------V 102 C A++S+V V G ++ E + A + + + PP Sbjct: 64 ACALGSAAASVVGTAVVGLTVAEVRRAAAEMEAMLTKGGPPPGGAFTDLAALEPARSFTN 123 Query: 103 KIHCSILAEDAIKAAIA 119 + LA A++ A Sbjct: 124 RHGSMQLAFRALEKAFR 140 >UniRef50_B0S9Z7 NifU related protein associated with Fe-S cluster formation n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9Z7_LEPBA Length = 141 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 19/116 (16%) Query: 23 NDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASS-------SLVTE 75 E + P CGD +KL ++ ++ I+ C AS SL++ Sbjct: 23 PSEPLLEVKSLNPLCGDEVKLYYQITEKKTIQIKAVSGDSCSICAASVGFLFKNQSLISY 82 Query: 76 WVKG------KSLDEAQ------AIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 G K E ++ ++ + C++L ++ I Sbjct: 83 EFIGSYGIERKKFLEGNESSLFGDLEEISFLRIVKTHSSRHRCALLPWQTLEKIIE 138 >UniRef50_Q4AAG9 Putative uncharacterized protein n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4AAG9_MYCHJ Length = 142 Score = 62.5 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 18/128 (14%) Query: 16 NVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTE 75 N + + C D L +++ + IE +F GC IAS L + Sbjct: 16 NKKFNEKKRICLTKNSQINENCDDRASLDLEIFE-KKIEKIQFCASGCSLLIASCYLFEK 74 Query: 76 WVKGKSLDEA--------QAIKNTDIAEELE---------LPPVKIHCSILAEDAIKAAI 118 + K++++ + I +I EL+ P ++ C + +K + Sbjct: 75 ILIKKTINQVKILLDKYEKMINFQEIIPELDSLNALVMVKNHPNRLVCVNIPVKLLKNQL 134 Query: 119 ADYKSKRE 126 +Y+ + Sbjct: 135 GNYEKNQN 142 >UniRef50_P47579 Uncharacterized protein MG337 n=1 Tax=Mycoplasma genitalium RepID=Y337_MYCGE Length = 138 Score = 62.1 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 K+ID Y N + + + + + C D + + ++ I F GC Sbjct: 6 RTKIIDIYSNLKYKKPLKSFQKILTTSDSDN--CEDFFNIGLNIDKNK-ITAIGFDGDGC 62 Query: 64 GSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIA 119 + ++ L + ++ K++++A+ I + IA + + + + +K I Sbjct: 63 IISTIATELSIKAIENKTINQAKKILSDLIATYKDK-----NSANQVVEELKLLIE 113 >UniRef50_Q6MTA6 NITROGEN FIXATION PROTEIN NIFU n=4 Tax=Mollicutes RepID=Q6MTA6_MYCMS Length = 145 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 22/138 (15%) Query: 4 SEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGC 63 E +I H+ NP N + N ++N + + C D + ++I + + II+ +F C Sbjct: 11 REIIIKHFLNPENK-TLTN-NQNAIIKELKSQTCADQLIIEILI-ENKIIKSMKFDGSAC 67 Query: 64 GSAIASSSL------------VTEWVKGK-------SLDEAQAIKNTDIAEELELPPVKI 104 A +S L E +K +L + + + +I Sbjct: 68 AIATSSIDLLINNLLNLDIKKAIELIKNYQNFLLTGTLVNIDQSNELVVMKNIHKQKNRI 127 Query: 105 HCSILAEDAIKAAIADYK 122 C+ LA + + + Y+ Sbjct: 128 LCASLALNDLLEILNSYE 145 >UniRef50_D0WJI3 Putative type I restriction-modification system, S subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJI3_9ACTN Length = 213 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 6/129 (4%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGD-VMKLQIKVNDEG-IIEDARFK 59 YS++ + + G ++ + GM G+ G ++L VN +IE A ++ Sbjct: 42 GYSDEALALVADVAKTGVPEDTN---AIGMAGSAKHGVIAVQLFAHVNPATHVIERAGYR 98 Query: 60 TYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPP-VKIHCSILAEDAIKAAI 118 +GC + IAS W++GK+++EA AI +AE P K + + A++ Sbjct: 99 AHGCLAMIASGCAAAYWMEGKTVEEAAAISAETLAEARGAVPRDKSYTARYGACAVRGMC 158 Query: 119 ADYKSKREA 127 D+ ++ A Sbjct: 159 GDFLIRQGA 167 >UniRef50_C5TE59 NifU-like involved in Fe-S cluster formation n=3 Tax=Zymomonas mobilis RepID=C5TE59_ZYMMO Length = 149 Score = 59.1 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 Y+ ++ + + D G AP CG M + ++D I + Sbjct: 5 LYTRDILKLATSIPFEERLEIAD---GRAEKRAPICGSQMACDVCLDDNQHITEIGLDIS 61 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQA 87 C AS++L+ + + G+SL E + Sbjct: 62 ACALGQASAALMGQDIIGRSLPELKE 87 >UniRef50_A5IXL2 Nitrogen fixation protein NifU n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXL2_MYCAP Length = 130 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 40/109 (36%), Gaps = 22/109 (20%) Query: 22 NNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKS 81 D + +CGD ++ + + I++D F GC I+S++L+ +++ + Sbjct: 10 KKDVQNKKIESFSNSCGDYLEADY-IIENKILKDLHFNGNGCAYFISSANLLCKYLNSTT 68 Query: 82 LDEAQ---------------------AIKNTDIAEELELPPVKIHCSIL 109 +DE+ + + + + ++ C + Sbjct: 69 IDESLYFIDLFEKNITGKPLSDEEKNKLGELLVFDNVNQHANRLDCVQM 117 >UniRef50_B6BGH4 Putative NifU-like N terminal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGH4_9PROT Length = 183 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 27/144 (18%) Query: 7 VIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSA 66 + H P N G ++ D VG G+ A + + +K D I D +F T Sbjct: 13 IAKHMMQPENYGKLEDAD-CVGVGIDNATK--SYVIMYMK-RDSSHILDVKFGTNSATQD 68 Query: 67 IAS-SSLVTEWVKGKSLDEAQAIK---NTDIAEELE--LPP-----------------VK 103 A+ SL+TE +KG+ + ++ D+ E PP Sbjct: 69 AATLGSLLTEMIKGEPIVDSLVTVLGLEQDLQEAYANIQPPKIDTSKPEGEQVEHISTDH 128 Query: 104 IHCSILAEDAIKAAIADYKSKREA 127 + + + +AA+ Y K+E Sbjct: 129 QDSANMVLTSFRAAMRHYDRKQEG 152 >UniRef50_C9RNY8 Nitrogen-fixing NifU domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNY8_FIBSS Length = 273 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 3 YSEKVIDHYENPRNVG---SFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARF 58 +S+K+ D + P+ G + +++ + V + +K+ + ++ E I + RF Sbjct: 9 FSQKLQDIAKAPKYRGAIFQIEADEKGLALVDVKEAS----LKVYLMIDPECDKILETRF 64 Query: 59 KTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV 102 TYG A + ++ ++D+A I + EEL P Sbjct: 65 FTYGGPLFTALADSFCRKIQMATVDDACKITAESLEEELRDTPD 108 >UniRef50_B1VA18 NifU homolog involved in Fe-S cluster formation n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VA18_PHYAS Length = 99 Score = 55.6 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 41 MKLQIKVNDEGIIEDARFKTYGCGSAIASSSLV-------------------TEWVKGKS 81 M +Q+K++ I D +++ C +AS+SL+ + K+ Sbjct: 1 MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKA 60 Query: 82 LDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKA 116 D+ Q +N + + P K +C +L ++A Sbjct: 61 YDKEQLDENIQSLDIVHQLPNKTNCVLLPWQTLQA 95 >UniRef50_A3VNK5 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VNK5_9PROT Length = 142 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 10/128 (7%) Query: 2 AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTY 61 YS+ +++ + + + + CG +++ + + G + D Sbjct: 4 LYSDSLLEAAA---GIPPVADMSDMAARARRTSRVCGSEVEVGLAMEG-GRVTDIALDVK 59 Query: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNT--DIAEELELPPVKIHCSILAEDAIKAAIA 119 C A++SL V+G + E + + + P A A A I Sbjct: 60 ACALGQAAASLFAGTVRGATAAEVRQVAAQMRAMLTADGPSPD----GRWAALAQLAPIR 115 Query: 120 DYKSKREA 127 Y ++ + Sbjct: 116 AYPARHAS 123 >UniRef50_C7LUF1 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF1_DESBD Length = 124 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 38 GDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 97 G +++ + V + II D F T G + +S + V K+++EA A+ DI Sbjct: 34 GRFVEIFVAVREGRII-DVGFLTNIPGDGLVCASAYCDEVLQKTVEEAGALCAQDILALF 92 Query: 98 ELP 100 P Sbjct: 93 PSP 95 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.158 0.479 Lambda K H 0.267 0.0484 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 851,958,835 Number of Sequences: 3077464 Number of extensions: 32589832 Number of successful extensions: 66746 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 577 Number of HSP's successfully gapped in prelim test: 152 Number of HSP's that attempted gapping in prelim test: 64843 Number of HSP's gapped (non-prelim): 746 length of query: 128 length of database: 1,040,396,356 effective HSP length: 94 effective length of query: 34 effective length of database: 751,114,740 effective search space: 25537901160 effective search space used: 25537901160 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 88 (38.3 bits)