 |
| Job Description | P0ACD4 | | Confidence | 33.26% | Date | Thu Jan 5 11:17:57 GMT 2012 |
| Rank | 23 | Aligned Residues | 86 |
| % Identity | 13% | Template | c3cxoA_ |
| PDB info |
PDB header:lyase | Chain: A: PDB Molecule:putative galactonate dehydratase; |
PDBTitle: crystal structure of l-rhamnonate dehydratase from2 salmonella typhimurium complexed with mg and 3-deoxy-l-3 rhamnonate
|
| Resolution | 2.00 Å |
|
 |
|   |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | L | Q | I | K | V | N | D | E | G | I | I | E | D | A | R | F | K | T | Y | G | C | G | S | A | I | A | S | S | S | L | V | T | E | W | V | K | G | K | S | L | D | E | A | Q | A | I | K | N | T | D | I | A | E | E | L | E | L | P | P | V | K | I | H | C | S | I | L | A | E | D | A | I | K | A | A | I | A | D | Y |
| Query Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|
|
|   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |
| . |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
T | L | I | V | E | V | E | A | E | N | R | Q | T | G | F | A | V | S | T | A | G | E | M | G | C | F | I | V | E | K | H | L | N | R | F | I | E | G | K | C | V | S | D | I | K | L | I | . |
H | D | Q | M | L | G | A | T | M | Y | Y | S | G | S | G | G | L | V | M | N | T | I | S | C | V | D | L | A | L | W | D | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T | S | B | T | T |
|  |  |  |  | . |  |  |  |  |  |  |  |  | T | T | T | S | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
|   |
|   |   |
122 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
| Query Sequence |   |
K | S | K | R | E | A | K |
| Query Conservation |   |
  |   |
|
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |   |
|   |
| Template Sequence |   |
F | G | K | V | V | G | L |
| Template Known Secondary structure |   |
 |  |  |  |  | T |
|
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|   |   |
148 | . | 150 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|