Job Description P16525 Confidence 7.27% Date Thu Jan 5 11:35:12 GMT 2012 Rank 18 Aligned Residues 42 % Identity 17% Template c2gefA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protease vp4; PDBTitle: crystal structure of a novel viral protease with a2 serine/lysine catalytic dyad mechanism Resolution 2.20 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		N	A	K	L	K	I	K	R	P	V	K	V	Q	P	I	A	R	V	W	Y	K	G	D	Q	K	.	.	Q	V	Q	H	A	C	P	T	P	L	I	A	L	I	N	R	D	N
Query Conservation																											.	.
Alig confidence																											.	.													.
Template Conservation																																									.
Template Sequence		K	F	N	V	K	T	R	T	D	L	T	I	L	P	V	A	D	V	F	W	R	A	D	G	S	A	D	V	D	V	V	W	N	D	X	P	A	V	A	.	G	Q	S	S	S
Template Known Secondary structure				S				S	S														T	T	S																.	S	S	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.		690	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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