BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (441 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO... 645 0.0 UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO... 597 e-169 UniRef50_A4WRD4 Ribosomal protein S12 methylthiotransferase rimO... 550 e-155 UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO... 546 e-154 UniRef50_C9YA36 Ribosomal protein S12 methylthiotransferase rimO... 409 e-113 UniRef50_UPI000192651A PREDICTED: similar to Y92H12BL.1 n=1 Tax=... 345 3e-93 UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pir... 328 3e-88 UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO... 319 1e-85 UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mit... 317 5e-85 UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotran... 316 1e-84 UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO... 312 2e-83 UniRef50_Q7UK39 Ribosomal protein S12 methylthiotransferase rimO... 311 3e-83 UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fu... 311 4e-83 UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Rum... 310 8e-83 UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO... 310 9e-83 UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO... 309 1e-82 UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO... 309 2e-82 UniRef50_Q0AXI3 Ribosomal protein S12 methylthiotransferase rimO... 304 4e-81 UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO... 304 5e-81 UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Sub... 303 6e-81 UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO... 303 7e-81 UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO... 303 7e-81 UniRef50_A7NIS8 Ribosomal protein S12 methylthiotransferase rimO... 303 9e-81 UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO... 303 1e-80 UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO... 301 4e-80 UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO... 298 2e-79 UniRef50_A8UT74 Putative uncharacterized protein n=1 Tax=Hydroge... 298 2e-79 UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Breviba... 297 5e-79 UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO... 297 6e-79 UniRef50_A0L887 Ribosomal protein S12 methylthiotransferase rimO... 296 8e-79 UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Vei... 296 9e-79 UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bact... 296 9e-79 UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Vic... 296 1e-78 UniRef50_A9F1Y8 Ribosomal protein S12 methylthiotransferase rimO... 295 2e-78 UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Cht... 294 5e-78 UniRef50_Q6MBU9 Ribosomal protein S12 methylthiotransferase rimO... 293 9e-78 UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerof... 292 1e-77 UniRef50_C9M5C2 RNA modification enzyme, MiaB-family n=1 Tax=Jon... 288 2e-76 UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO... 288 3e-76 UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO... 288 3e-76 UniRef50_A6NW35 Putative uncharacterized protein n=1 Tax=Bactero... 287 7e-76 UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO... 286 1e-75 UniRef50_C4Z0L1 2-alkenal reductase n=16 Tax=Bacteria RepID=C4Z0... 285 2e-75 UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO... 285 2e-75 UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO... 285 2e-75 UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 285 3e-75 UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO... 285 3e-75 UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdema... 282 1e-74 UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO... 281 2e-74 UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoni... 281 4e-74 UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisp... 280 1e-73 UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO... 279 1e-73 UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 278 3e-73 UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Aci... 277 4e-73 UniRef50_B0P6Q6 Putative uncharacterized protein n=1 Tax=Anaerot... 277 6e-73 UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO... 276 1e-72 UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIH... 275 3e-72 UniRef50_B2KB59 Ribosomal protein S12 methylthiotransferase rimO... 273 7e-72 UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO... 273 1e-71 UniRef50_D1U9N9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Des... 271 3e-71 UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=... 270 7e-71 UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase... 268 3e-70 UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Ta... 268 3e-70 UniRef50_A4S5H4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 268 4e-70 UniRef50_B3EPX5 Ribosomal protein S12 methylthiotransferase rimO... 267 5e-70 UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmati... 267 5e-70 UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eub... 265 3e-69 UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO... 265 3e-69 UniRef50_A3EVU0 RNA modification enzyme, MiaB family n=3 Tax=Lep... 264 4e-69 UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostri... 264 6e-69 UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP... 263 7e-69 UniRef50_Q2LQ68 Ribosomal protein S12 methylthiotransferase rimO... 263 7e-69 UniRef50_A0LIM0 Ribosomal protein S12 methylthiotransferase rimO... 261 4e-68 UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclass... 259 2e-67 UniRef50_A9A0B5 Ribosomal protein S12 methylthiotransferase rimO... 259 2e-67 UniRef50_B8J4P8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 258 3e-67 UniRef50_C0GKG0 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Det... 257 6e-67 UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO... 256 1e-66 UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO... 255 3e-66 UniRef50_C0QIB5 2-methylthioadenine synthetase n=1 Tax=Desulfoba... 253 1e-65 UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO... 252 3e-65 UniRef50_Q1MQJ5 Ribosomal protein S12 methylthiotransferase rimO... 250 8e-65 UniRef50_C7MNG6 MiaB-like tRNA modifying enzyme YliG, TIGR01125 ... 249 2e-64 UniRef50_D2AXY5 RNA modification enzyme, MiaB-family n=1 Tax=Str... 247 8e-64 UniRef50_A8ERB7 Ribosomal protein S12 methylthiotransferase rimO... 247 8e-64 UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Ato... 243 1e-62 UniRef50_D1B785 MiaB-like tRNA modifying enzyme YliG n=1 Tax=The... 242 2e-62 UniRef50_B9L1I3 MiaB-like tRNA modifying enzyme YliG, TIGR01125 ... 242 2e-62 UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobi... 239 1e-61 UniRef50_C0R0S3 MiaB, 2-methylthioadenine synthetase n=2 Tax=Bra... 238 2e-61 UniRef50_B8DM03 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 238 3e-61 UniRef50_Q2J750 Ribosomal protein S12 methylthiotransferase rimO... 238 3e-61 UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collins... 236 9e-61 UniRef50_Q726F7 Ribosomal protein S12 methylthiotransferase rimO... 231 4e-59 UniRef50_C1SNN4 SSU ribosomal protein S12P methylthiotransferase... 230 7e-59 UniRef50_A0LV11 Ribosomal protein S12 methylthiotransferase rimO... 230 8e-59 UniRef50_A8J945 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 229 1e-58 UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO... 226 1e-57 UniRef50_C9RIJ5 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Fib... 222 2e-56 UniRef50_B0SGD8 Ribosomal protein S12 methylthiotransferase rimO... 221 4e-56 UniRef50_Q0RDV0 Ribosomal protein S12 methylthiotransferase rimO... 221 5e-56 UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=... 221 6e-56 UniRef50_A7H5G3 Ribosomal protein S12 methylthiotransferase rimO... 218 5e-55 UniRef50_B1GZH1 Ribosomal protein S12 methylthiotransferase rimO... 217 6e-55 UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 ... 209 1e-52 UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bac... 206 2e-51 UniRef50_B5Y8R0 2-methylthioadenine synthetase n=1 Tax=Coprother... 205 2e-51 UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 205 2e-51 UniRef50_B0VJ72 Putative 2-alkenal reductase n=1 Tax=Candidatus ... 203 9e-51 UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Ba... 199 1e-49 UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicute... 199 1e-49 UniRef50_C8PLV8 Radical SAM domain protein n=1 Tax=Treponema vin... 198 3e-49 UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 197 9e-49 UniRef50_C8PFK3 2-methylthioadenine synthetase n=1 Tax=Campyloba... 193 8e-48 UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 193 9e-48 UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 189 1e-46 UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=... 189 1e-46 UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rho... 189 2e-46 UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 188 4e-46 UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransfer... 187 5e-46 UniRef50_Q6S4W8 Putative 2-methylthioadenine synthetase n=1 Tax=... 187 6e-46 UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisp... 187 9e-46 UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 186 1e-45 UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransfer... 186 1e-45 UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 185 4e-45 UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bac... 184 5e-45 UniRef50_D2Q1R9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Act... 183 1e-44 UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 182 2e-44 UniRef50_Q1AW39 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 182 2e-44 UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 179 1e-43 UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 179 2e-43 UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 179 2e-43 UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransfer... 179 2e-43 UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransfer... 178 3e-43 UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Cal... 178 3e-43 UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 178 4e-43 UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransfer... 177 9e-43 UniRef50_Q0W344 Putative 2-methylthioadenine synthetase n=1 Tax=... 177 1e-42 UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 176 1e-42 UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 176 2e-42 UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 176 2e-42 UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candida... 176 2e-42 UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 175 2e-42 UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fu... 175 3e-42 UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 174 5e-42 UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillone... 174 6e-42 UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransfer... 174 6e-42 UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 174 8e-42 UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bactero... 173 1e-41 UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2... 173 1e-41 UniRef50_Q4FNN5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 172 2e-41 UniRef50_D1YVW1 Putative 2-methylthioadenine synthetase n=1 Tax=... 172 2e-41 UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pir... 172 3e-41 UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 172 3e-41 UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fib... 171 4e-41 UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 171 5e-41 UniRef50_C8WY42 MiaB-like tRNA modifying enzyme n=58 Tax=Bacilla... 171 5e-41 UniRef50_Q2GCU4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 171 6e-41 UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 171 7e-41 UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 171 7e-41 UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2... 170 8e-41 UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 170 1e-40 UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax... 170 1e-40 UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 169 2e-40 UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 169 2e-40 UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 169 2e-40 UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 168 3e-40 UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransfer... 168 4e-40 UniRef50_C1SMW7 MiaB-like tRNA modifying enzyme n=1 Tax=Denitrov... 168 4e-40 UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=... 168 4e-40 UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransfer... 168 4e-40 UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransfer... 167 6e-40 UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 167 9e-40 UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicu... 167 1e-39 UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax... 166 1e-39 UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 166 1e-39 UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 166 2e-39 UniRef50_D2RJ51 RNA modification enzyme, MiaB family n=1 Tax=Aci... 166 2e-39 UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 165 2e-39 UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Vic... 165 3e-39 UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halother... 165 3e-39 UniRef50_Q8EUX4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 165 3e-39 UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sph... 165 3e-39 UniRef50_B1I695 MiaB-like tRNA modifying enzyme n=6 Tax=Clostrid... 165 3e-39 UniRef50_A3DNI7 RNA modification enzyme, MiaB family n=10 Tax=Th... 164 4e-39 UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransfer... 164 7e-39 UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxyd... 164 8e-39 UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 ... 163 1e-38 UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae Rep... 163 1e-38 UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 163 1e-38 UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiot... 163 1e-38 UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransfer... 162 2e-38 UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Cor... 162 2e-38 UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Seb... 162 3e-38 UniRef50_Q7VGP6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 161 5e-38 UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostri... 160 1e-37 UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransfer... 160 1e-37 UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 160 1e-37 UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmati... 159 1e-37 UniRef50_C7MNF9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 159 2e-37 UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 159 2e-37 UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostri... 159 2e-37 UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dic... 159 2e-37 UniRef50_C4V544 2-methylthioadenine synthetase n=3 Tax=Selenomon... 159 2e-37 UniRef50_A3JF75 Putative uncharacterized protein n=1 Tax=Marinob... 158 4e-37 UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 158 4e-37 UniRef50_Q58277 Putative methylthiotransferase MJ0867 n=10 Tax=M... 157 6e-37 UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Syn... 157 8e-37 UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 157 1e-36 UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 157 1e-36 UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 156 1e-36 UniRef50_A8ACE3 RNA modification enzyme, MiaB family n=1 Tax=Ign... 156 1e-36 UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 156 2e-36 UniRef50_C8WHM2 MiaB-like tRNA modifying enzyme n=3 Tax=Coriobac... 156 2e-36 UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 156 2e-36 UniRef50_A8F640 MiaB-like tRNA modifying enzyme n=1 Tax=Thermoto... 156 2e-36 UniRef50_D0WEN9 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 155 2e-36 UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 155 2e-36 UniRef50_B5YKW1 Putative uncharacterized protein n=1 Tax=Thermod... 155 2e-36 UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 155 2e-36 UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavo... 155 3e-36 UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 155 3e-36 UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 155 4e-36 UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Des... 154 4e-36 UniRef50_B0TAE1 Miab-like tRNA modifying enzyme n=2 Tax=Clostrid... 154 5e-36 UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotro... 154 5e-36 UniRef50_O29021 Putative methylthiotransferase AF_1247 n=3 Tax=A... 154 5e-36 UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mi... 154 5e-36 UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 154 5e-36 UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransfer... 154 6e-36 UniRef50_C1XPU3 MiaB-like tRNA modifying enzyme n=2 Tax=Meiother... 154 7e-36 UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 154 8e-36 UniRef50_C7RAG6 MiaB-like tRNA modifying enzyme n=1 Tax=Kangiell... 154 9e-36 UniRef50_A8Z5Z4 Putative MiaB-like protein n=2 Tax=Candidatus Su... 153 1e-35 UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 153 1e-35 UniRef50_Q7UJ47 Putative uncharacterized protein n=1 Tax=Rhodopi... 153 1e-35 UniRef50_D1N7Z2 MiaB-like tRNA modifying enzyme n=1 Tax=Victival... 153 1e-35 UniRef50_Q9ZDB6 Putative methylthiotransferase RP416 n=42 Tax=ce... 152 2e-35 UniRef50_C1DVQ2 Putative uncharacterized protein n=3 Tax=Hydroge... 152 2e-35 UniRef50_D1C3B2 MiaB-like tRNA modifying enzyme n=1 Tax=Sphaerob... 152 2e-35 UniRef50_A6UW93 MiaB-like tRNA modifying enzyme n=2 Tax=Methanoc... 152 2e-35 UniRef50_A2BLS4 Conserved archaeal protein n=2 Tax=Desulfurococc... 152 2e-35 UniRef50_B2A5M5 RNA modification enzyme, MiaB family n=1 Tax=Nat... 152 3e-35 UniRef50_C0R0P9 MiaB, 2-methylthioadenine synthetase n=2 Tax=Bra... 152 3e-35 UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=... 151 5e-35 UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clo... 151 5e-35 UniRef50_A9HM32 MiaB-like tRNA modifying enzyme n=12 Tax=Alphapr... 151 5e-35 UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Aci... 151 5e-35 UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 150 7e-35 UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bactero... 150 8e-35 >UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO n=48 Tax=cellular organisms RepID=RIMO_PSE14 Length = 447 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/444 (70%), Positives = 363/444 (81%), Gaps = 6/444 (1%) Query: 1 MSKVT--PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDS 58 MS VT PK+GFVSLGCPK LVDSERILT+LR EGY+VV +Y+DAD+V+VNTCGFID+ Sbjct: 1 MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT 60 Query: 59 AVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 A ESLE IGEA+ ENGKVIVTGC+G + IR+VHP VL +TGP YEQV+ VH VP Sbjct: 61 AKAESLEVIGEAIKENGKVIVTGCMGVDANVIRDVHPSVLSVTGPQQYEQVVNAVHDVVP 120 Query: 119 KPK-HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 K HNP + LVP QGVKLTPRHYAYLKISEGCNH C+FCIIPSMRG LVSRP+G+VL E Sbjct: 121 PRKDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 AKRLV +GVKE+LVISQDTSAYGVDVK+RTGF +G+PVKT M LC+ L +G+W RLHY Sbjct: 181 AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPVKTRMTELCQALGSMGVWVRLHY 240 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 VYPYPHVD++IPLMA GKILPYLDIP QHASP+ILKLMKRP D+ LARIK WRE CP+ Sbjct: 241 VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD 300 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-VPEEVK 356 L +RSTFIVGFPGETEEDFQ LLD+L EA+LDRVGCF+YSPVEGA AN L VP++VK Sbjct: 301 LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK 360 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE- 415 ++RW+RFM QQ ISA RLQ K+G+EI V+IDEVD+ GA+GR DAPEIDG V++ E Sbjct: 361 QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLEE 420 Query: 416 -TNVKPGDILRVKVEHADEYDLWG 438 + V+PGD + +V ADEYDLW Sbjct: 421 GSTVQPGDKIMCRVTDADEYDLWA 444 >UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO n=232 Tax=cellular organisms RepID=RIMO_PSYCK Length = 531 Score = 597 bits (1538), Expect = e-169, Method: Compositional matrix adjust. Identities = 288/445 (64%), Positives = 352/445 (79%), Gaps = 9/445 (2%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 V PKIGFVSLGCPK LVDSERI+TEL +GY V Y+ AD+V+VNTCGFI+SAVQES Sbjct: 84 VNAAPKIGFVSLGCPKALVDSERIITELSRDGYQVASDYEGADLVVVNTCGFIESAVQES 143 Query: 64 LEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP--- 120 L+AIGEA+++NGKVIVTGCLG + D+IRE+HP VL +TG H+Y+ V+ V +VPKP Sbjct: 144 LDAIGEAISKNGKVIVTGCLGKEADKIREMHPAVLAVTGAHAYDDVIRAVALHVPKPDCG 203 Query: 121 ---KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++P + L+ E G+KLTP HYAYLKISEGCNHRCTFCIIPS+RGDLVSRPI V++E Sbjct: 204 LDASYDPKIDLINEAGIKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIDSVMNE 263 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A L AGVKE+L+ISQDTSAYG+D+K++T F NG P+K+ LC+ L+ LGIW RLHY Sbjct: 264 ALALKKAGVKELLIISQDTSAYGLDLKYKTSFWNGMPLKSKFYDLCQALNDLGIWVRLHY 323 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 VYPYPHVD V+ LM E K+LPYLDIP QHAS RILK MKRP + LARI WREICP+ Sbjct: 324 VYPYPHVDKVVELMGEKKLLPYLDIPFQHASHRILKAMKRPAHSENTLARIHAWREICPD 383 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + +RSTF+VGFPGETEEDFQ LLD+L EARLDRVG F YS VEGA AN LP+ VPE+VK+ Sbjct: 384 IVIRSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEVEGAVANDLPNHVPEDVKQ 443 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVD-EEG-AIGRSMADAPEIDGAVYLNG- 414 ER+ R M LQQ ISA++LQEK+G+ ++V++DE+D EEG AI RS ADAPEIDG VY++ Sbjct: 444 ERYERLMTLQQDISAQKLQEKIGKTLMVLVDEIDREEGVAICRSYADAPEIDGHVYVDDI 503 Query: 415 ETNVKPGDILRVKVEHADEYDLWGS 439 + +VK G L V ++ A EYDL+ S Sbjct: 504 DAHVKVGQFLTVTIDDASEYDLFAS 528 >UniRef50_A4WRD4 Ribosomal protein S12 methylthiotransferase rimO n=268 Tax=Bacteria RepID=RIMO_RHOS5 Length = 457 Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust. Identities = 278/436 (63%), Positives = 328/436 (75%), Gaps = 10/436 (2%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 QP IG VSLGCPK LVDSERILT LR EGY + P Y AD VIVNTCGF+DSA ESLEA Sbjct: 29 QPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDYAGADAVIVNTCGFLDSAKAESLEA 88 Query: 67 IGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 IGEAL ENG+VIVTGCLGA+ D I HPKVL +TGPH YEQVL+ VH VP P +PF+ Sbjct: 89 IGEALRENGRVIVTGCLGAEPDYITGAHPKVLAVTGPHQYEQVLDAVHGAVP-PAPDPFV 147 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 L+P GV+LTPRH++YLKISEGCNH C FCIIP MRG LVSRP VL EA++LV+AGV Sbjct: 148 DLLPATGVRLTPRHFSYLKISEGCNHSCRFCIIPDMRGRLVSRPERAVLREAEKLVEAGV 207 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 +E+LVISQDTSAYG D K PV+ ++ L +L +LG W RLHYVYPYPHV + Sbjct: 208 RELLVISQDTSAYGTDWKG--------PVRFPILPLARELGQLGAWVRLHYVYPYPHVRE 259 Query: 247 VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 +IPLMAEG ILPYLDIP QHA P +LK M RP + R L I WR CP++TLRSTFIV Sbjct: 260 LIPLMAEGLILPYLDIPFQHAHPEVLKRMARPAAAARTLDEIAAWRRDCPDITLRSTFIV 319 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 G+PGETEE+FQ LLD+L EA+LDRVGCF+Y V GA +NALPD V E+K+ERW RFMQ Sbjct: 320 GYPGETEEEFQTLLDWLDEAQLDRVGCFQYENVAGARSNALPDHVAPELKQERWERFMQK 379 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN-GETNVKPGDILR 425 Q IS +L ++G+ + VI+DEVD EGA R+ ADAPEIDG ++++ G + PGD+L Sbjct: 380 AQAISEAKLAARIGQRLEVIVDEVDGEGATCRTKADAPEIDGNLFIDEGFEALSPGDLLT 439 Query: 426 VKVEHADEYDLWGSRV 441 V+VE A EYDLWG V Sbjct: 440 VEVEEAGEYDLWGRAV 455 >UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO n=47 Tax=Bacteria RepID=RIMO_DEIGD Length = 485 Score = 546 bits (1407), Expect = e-154, Method: Compositional matrix adjust. Identities = 275/453 (60%), Positives = 341/453 (75%), Gaps = 24/453 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK+GF+SLGCPK LVDSERILT+LR EGY+V P+Y+DA VIVNTCGFI AV+ESL AI Sbjct: 14 PKVGFISLGCPKALVDSERILTQLRAEGYEVAPNYEDAQAVIVNTCGFITPAVEESLSAI 73 Query: 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 GEAL+ GKVIVTGCLG + ++I E HPKV ITG + + V+ HV +P + +PF Sbjct: 74 GEALDATGKVIVTGCLGERPEKILERHPKVAAITGSEAVDDVMAHVRELLPI-ELDPFTG 132 Query: 128 LVP------EQG------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 L+P QG VKLTPRHYAY+KI+EGCNH C+FCIIP +RG VSR G VL Sbjct: 133 LLPVAAPGMRQGDTLAPSVKLTPRHYAYVKIAEGCNHTCSFCIIPKLRGRQVSRDAGAVL 192 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 EA RL+ G KE+++ISQDTSAYGVD++HRT GE V+ ++ L E+L ++G W R+ Sbjct: 193 YEAYRLIAGGTKELMIISQDTSAYGVDLRHRTSEFQGEQVRAHLIDLAEKLGEMGAWVRM 252 Query: 236 HYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 HYVYPYPHV+ ++ LM++GKILPYLD+PLQHASP +LK M+RPG+ +QL I++WREIC Sbjct: 253 HYVYPYPHVERIVELMSQGKILPYLDVPLQHASPAVLKRMRRPGA-GKQLDTIRRWREIC 311 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 PEL +RSTFIVGFPGETEEDFQ+LLDFL+EARLDRVG F YS VE ADANAL +PEEV Sbjct: 312 PELVIRSTFIVGFPGETEEDFQLLLDFLEEARLDRVGAFTYSDVEEADANALDGAIPEEV 371 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-DEEG------AIGRSMADAPEIDG 408 K+ER RFM++ Q+IS E+L EKVGR + VIIDE D+EG IGR+ DAP IDG Sbjct: 372 KQERLARFMEVAQRISREKLAEKVGRVLDVIIDEFNDDEGDEPGTRLIGRTKGDAPGIDG 431 Query: 409 AVYL---NGETNVKPGDILRVKVEHADEYDLWG 438 VYL + VK GDI++ ++E +DEYDL+G Sbjct: 432 QVYLYAGDFAGQVKIGDIVQARIEDSDEYDLYG 464 >UniRef50_C9YA36 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA36_9BURK Length = 507 Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/296 (66%), Positives = 240/296 (81%), Gaps = 14/296 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK+GFVSLGCPK L DSE ILT+L EGY ++ AD+VIVNTCGFID AV+ESL+ I Sbjct: 26 PKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFQGADLVIVNTCGFIDDAVKESLDTI 85 Query: 68 GEALNENGKVIVTGCLGAK-----EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 GEAL ENG+VIVTGCLGAK E+ +R++HPKVL +TGPH+ ++V++ VH +PKP H Sbjct: 86 GEALAENGRVIVTGCLGAKTTDGGENMVRQMHPKVLAVTGPHATQEVMDAVHLNLPKP-H 144 Query: 123 NPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 +PFL LVP+ GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG+VLSEA Sbjct: 145 DPFLDLVPQSFGVAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEA 204 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL----GIWTR 234 + L + GVKE+LVISQDTSAYGVDVK+RTGF +G+PVKT M+ L + L +L G W R Sbjct: 205 RALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQALGELAEPYGAWVR 264 Query: 235 LHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 LHYVYPYP VD+++PLMA G++LPYLD+PLQH+ P +L+ MKRP S ++ L R++Q Sbjct: 265 LHYVYPYPSVDEIVPLMATGRVLPYLDVPLQHSHPDVLRRMKRPASGEKNLERLQQ 320 >UniRef50_UPI000192651A PREDICTED: similar to Y92H12BL.1 n=1 Tax=Hydra magnipapillata RepID=UPI000192651A Length = 353 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 195/441 (44%), Positives = 248/441 (56%), Gaps = 119/441 (26%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK+GFVSLGCPK L DSE ILT+L EGY ++ AD+VIVNTCGFID +A+ Sbjct: 15 PKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFQGADLVIVNTCGFID-------DAV 67 Query: 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 E+L+ G+ + Sbjct: 68 KESLDTIGEALA------------------------------------------------ 79 Query: 128 LVPEQG-VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 E G V LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG+VLSEA+ L + GV Sbjct: 80 ---ENGRVILTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEARALFEGGV 136 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL----GIWTRLHYVYPYP 242 KE+LVISQDTSAYGVDVK+RTGF +G+PVKT M+ L + L +L G W RLHYVYPYP Sbjct: 137 KELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQALGELAEPYGAWVRLHYVYPYP 196 Query: 243 HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 VD+++PLMA G++LPYLD+PLQH+ P +L+ MKRP S ++ L R++ Sbjct: 197 SVDEIVPLMATGRVLPYLDVPLQHSHPDVLRRMKRPASGEKNLERLQX------------ 244 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 A AN LP +P EV+EER R Sbjct: 245 -------------------------------------XXATANDLPGMLPVEVREERRAR 267 Query: 363 FMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDGAVYL----NGE 415 FMQ+ +++SA RLQ +VG + V++D + +G +GRS ADAPEIDG V L Sbjct: 268 FMQVAEEVSAARLQRRVGSVMQVLVDSAPALGRKGGVGRSYADAPEIDGVVRLLPPEKIS 327 Query: 416 TNVKPGDILRVKVEHADEYDL 436 +K G+ + ++ A +DL Sbjct: 328 KTLKVGEFTKARIVSAQGHDL 348 >UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWN1_9PLAN Length = 465 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 184/446 (41%), Positives = 275/446 (61%), Gaps = 26/446 (5%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA 70 FVSLGCPKNLVDSER+L L+ +GYD+V D AD V+VNTCGFI+ A ES +AI E Sbjct: 20 SFVSLGCPKNLVDSERMLGLLKLDGYDLVAEPDGADFVVVNTCGFIERARTESFQAIDEM 79 Query: 71 L--NENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN- 123 L + G+ VIV+GCL ++ +Q+ E P + + G EQ+ + + + Sbjct: 80 LELKKQGRTKGVIVSGCLAERQKEQLLEDRPGIDCLVGVFGREQITQVADRLLGSLEEQR 139 Query: 124 ------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 P +L +++TPRH+AYLKISEGC+ CTFC IP MRG ++P+ EVL E Sbjct: 140 SVFQPAPIRALSDTDRLRITPRHFAYLKISEGCDRLCTFCAIPKMRGKHATKPMEEVLKE 199 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A++L GVKE+++++QDT+ YG+D+ GEP ++ E++ + W RL Y Sbjct: 200 ARQLAADGVKELVIVAQDTTYYGIDL-------YGEPRLAELLREIEKVEGIQ-WIRLMY 251 Query: 238 VYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D++I ++A+ KI+PY+D+PLQH + +L+ M R + +IK+ RE P Sbjct: 252 FYPMYITDELIDVIAKSEKIVPYIDMPLQHINDTMLRRMSRRVTRAETELQIKKLREAIP 311 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 LTLR+TFI GFPGET+E ++ L +FL+E + +R+G F YS A LPD + EEVK Sbjct: 312 NLTLRTTFITGFPGETQEQYEELREFLREQKFERMGVFTYSFEPDTPAANLPDHLSEEVK 371 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEIDGAVYLN 413 ER M +QQ+++ + ++ + + VI+D E ++ IGRSMADAP++DG V++ Sbjct: 372 NERREALMAVQQELAFAWNEAQIDKVMPVILDQSVEGEKNVWIGRSMADAPDVDGLVFVT 431 Query: 414 G-ETNVKPGDILRVKVEHADEYDLWG 438 G + + GDI+ V++ + +YDL G Sbjct: 432 GHKYRLHAGDIVDVQIVTSQQYDLVG 457 >UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Clostridiales RepID=RIMO_SYMTH Length = 485 Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 183/458 (39%), Positives = 279/458 (60%), Gaps = 33/458 (7%) Query: 2 SKVTPQP-KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 +++ +P K+GF+SLGC KNLVD+E ++ LR GY + ++AD+++VNTCGFID+A Sbjct: 12 AQIAGRPVKVGFISLGCAKNLVDTESMIGLLRNTGYQITNRAEEADVLVVNTCGFIDAAK 71 Query: 61 QESLEAIGEALNENGK-----VIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHV 113 QES++AI EA + ++V GC+ + E+ RE+ P++ + G Y ++ E V Sbjct: 72 QESVDAILEAAQHKTRGRCQALVVAGCMVPRYGEELAREI-PEIDALVGTADYPRIGEVV 130 Query: 114 HHYVPKPKHNPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + ++ + V TP + AYLKI+EGC+ C FC IP MRG S Sbjct: 131 AGILAGQRVQQISDPDSITDWNFERVLATPGYTAYLKIAEGCDCACAFCSIPLMRGRHRS 190 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RPI ++ EA+RL GV+E++VISQDT+ YG+D+ K + L +L++ Sbjct: 191 RPIESIVDEARRLAGMGVRELVVISQDTTYYGLDLYR----------KPMLARLLRELAQ 240 Query: 229 L-GI-WTRLHYVYPYPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + GI W R+HY YP D++I ++ E K+L YLD+PLQH S R+L++M RP + + L Sbjct: 241 VDGIRWIRIHYSYPTRITDELIEVIVTEPKVLNYLDLPLQHGSNRVLRIMNRPANAEGYL 300 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 +++ RE P++ LRSTFI G PGETEEDF++LLDFL+ D VG F YS EG A Sbjct: 301 RLVQKLRERVPDICLRSTFIAGHPGETEEDFELLLDFLRACEFDHVGVFAYSQEEGTKAG 360 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMAD 402 + +Q+PEEV+ R +R M++QQ+I+ R Q +VGRE+ V+++ +G +GR Sbjct: 361 QM-EQLPEEVRLARRDRAMEVQQEIARRRNQLQVGRELEVLVEGRSPQGRGWFVGRCYGQ 419 Query: 403 APEIDGAVYLNGETN--VKPGDILRVKVEHADEYDLWG 438 +P IDG V +KPGD+++V++ +YDL G Sbjct: 420 SPGIDGVVLFRAPAGAELKPGDMVQVRITGVQDYDLLG 457 >UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ61_9FIRM Length = 455 Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 183/449 (40%), Positives = 275/449 (61%), Gaps = 25/449 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K GF+SLGC KNLVD+E +L L+ G ++ + +AD++IVNTC FI SA +ES+ I Sbjct: 2 KAGFISLGCSKNLVDTEVMLGILKQHGIELTANPAEADILIVNTCAFIQSAKEESITTIL 61 Query: 69 EA--LNENGK---VIVTGCLGA--KEDQIREVHPKVLEITGPHSYEQVLEHVH-----HY 116 E+G+ +IV GCLG K++ + E+ P+ I G ++ +++E V H Sbjct: 62 NMAEYKESGRCRSLIVAGCLGQRYKQELLDEI-PEADAIIGTGAWGRIMEAVEETLKGHR 120 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 V + L + TP + AY+KI+EGCN+RC FC IP +RGD SR I ++ Sbjct: 121 VVIAGKDEALYDENTPRITTTPSYTAYVKIAEGCNNRCAFCAIPYIRGDYRSRRIEDICD 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E + L + GV+E+++I+QD++ YG D+ G P + ++ ++ KL W R Sbjct: 181 EVRHLTENGVREVVLIAQDSTEYGRDLY-------GAPKLSELLREIVKVPKLQ-WVRTL 232 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++I +A E KI Y+D+PLQHA +L+ M+RP + + A IK+ RE Sbjct: 233 YSYPKYFSDELIETIASEPKICKYVDLPLQHAHDAVLRSMRRPDTQEEMRALIKKLRERI 292 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P +T+RSTFIVGFPGET+ + L +F++E RLD+VG F YS EG A +P+QVPEE+ Sbjct: 293 PGVTIRSTFIVGFPGETDAQYHTLRNFIEEMRLDKVGVFTYSREEGTPAYDMPNQVPEEI 352 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYL 412 +ER++ M LQ +IS + Q G+E+ V+++ DEE ++GRS +APE+DG VY+ Sbjct: 353 MQERYHDLMSLQCKISEQINQSLEGKELDVLVEGRDEEQPNISVGRSYREAPEVDGQVYV 412 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 +T+ KPGDI+RV+V YD+ G R+ Sbjct: 413 ENDTDSKPGDIVRVRVLQGFTYDIVGERI 441 >UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotransferase n=3 Tax=Cyanobacteria RepID=UPI0001C33830 Length = 439 Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 174/448 (38%), Positives = 267/448 (59%), Gaps = 27/448 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 +P I LGC KN +DSE IL L EGY V + + AD V+VNTC FI A +ES+ Sbjct: 4 KPAIAISHLGCEKNRIDSEHILGLLAAEGYSVSSNENLADYVVVNTCSFIQQAREESVRT 63 Query: 67 IGEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHY-----VPKP 120 + E N K+I+ GC+ +DQ+ E P+V+ I G +Y+++++ V V Sbjct: 64 LVELAENNKKIIIAGCMAQHFQDQLLEELPEVVAIVGTGNYQEIVKTVQRVELGERVIDI 123 Query: 121 KHNPFLSLVPEQGV---KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 P + + ++ V + T AYL+I+EGCN+RCTFCIIP +RG+ SR I +++E Sbjct: 124 SQKP--TFIADETVPRYRTTNEGVAYLRIAEGCNYRCTFCIIPHLRGNQRSRTIESIVAE 181 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLH 236 A++L + GV+EI+++SQ T+ YG+D+ K + L + L K+ + W R+H Sbjct: 182 AQQLANEGVQEIIIVSQITTNYGLDLYG----------KVKLAELLQALGKVNVPWIRVH 231 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP +V+ + E ++PYLD+PLQH+ P+ILK M RP IK R Sbjct: 232 YAYPTGLTAEVLKAVKEVPNVIPYLDLPLQHSHPKILKAMNRPWKEAINDEIIKSIRASI 291 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P++ LR+TFIVGFPGET+E F+ L+ F+K D VG F +SP EG + +PDQVP E+ Sbjct: 292 PDVVLRTTFIVGFPGETDEYFEHLVKFIKRHHFDHVGVFVFSPEEGTPSYKMPDQVPLEI 351 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVYLN 413 +ER + M++QQ IS + Q+ VG+ + V+I++ + + IGRS+ +P++DG V++ Sbjct: 352 AQERRDYLMEIQQPISNRKNQQYVGKIVKVLIEQENTKTHQYIGRSIKSSPDVDGVVFVK 411 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ + I+ V++ AD YDL+G V Sbjct: 412 GKAQL--NSIIPVEITKADAYDLYGKVV 437 >UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RIMO_THEYD Length = 425 Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 172/432 (39%), Positives = 258/432 (59%), Gaps = 22/432 (5%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA-- 70 ++LGCPKN VDS ++ L EG+ V + AD V +NTC FI+ A +ES++ I A Sbjct: 7 ITLGCPKNTVDSRHLIDALTKEGFYYVEEFKKADFVFINTCCFINDAKEESIDEILTAAK 66 Query: 71 LNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLV 129 + K+IV GCL + ++ + P++ + G +++++++ + K++ F+S Sbjct: 67 FKIDRKLIVFGCLSKRYGKELEKEIPEIDAVFGVDEKDKIIDYIKQF---SKNSNFIS-- 121 Query: 130 PEQGVKLT--PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 Q + T P Y Y+KI+EGC+ RC+FCIIP +RG S E+L E + V +G+K Sbjct: 122 --QNFQYTVEPPSYRYIKIAEGCSRRCSFCIIPDVRGPFRSLNPEEILKEVENFVHSGIK 179 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDV 247 E ++++QD + YG D+K G +K + LC K W RL Y+YP +++ Sbjct: 180 EFILVAQDITQYGKDLK-------GYTLKRLLKDLCS--IKGDFWIRLLYLYPSDIDENL 230 Query: 248 IPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 I +A E KI+ YLDIP+QH+ RIL+LM R G+ L +IKQ R+ PE+TLRSTFIV Sbjct: 231 IETIADEEKIVKYLDIPMQHSEERILRLMGRRGTKKEYLKKIKQIRQAIPEVTLRSTFIV 290 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 GFP ETEE+FQ L+DF++E + DR+G FKYS EG A +L Q+PE VK R+N M Sbjct: 291 GFPTETEEEFQRLVDFIEEVQFDRLGVFKYSKEEGTKAYSLKGQIPENVKNRRYNEIMAR 350 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRV 426 Q IS E+ + +G++ +ID +D + AI R APEIDG V L ++K G+ + + Sbjct: 351 QAVISLEKNRALIGKKYEALIDYIDADIAIARLYCHAPEIDGVVILENTADLKAGEKVTI 410 Query: 427 KVEHADEYDLWG 438 + EYD+ G Sbjct: 411 LITEGYEYDVKG 422 >UniRef50_Q7UK39 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Planctomycetaceae RepID=RIMO_RHOBA Length = 477 Score = 311 bits (797), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 183/457 (40%), Positives = 272/457 (59%), Gaps = 34/457 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 P+ + VSLGCPKNLVD+E++L L +GY +V S D AD V+VNTCGFIDSA ES+ Sbjct: 30 PRGRYAVVSLGCPKNLVDTEQMLGRLDADGYRMVDSVDGADFVVVNTCGFIDSARDESMA 89 Query: 66 AIGE--ALNENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV------ 113 AI E AL +GK V+VTGCL ++ D++ + P + + G ++ V Sbjct: 90 AIDEMLALKRDGKLRNVVVTGCLAERQQDKLLQARPDIDALVGVFGRNDIVSVVDELYSG 149 Query: 114 ---HHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + KP LS V TPRH+AYLKISEGC+ CTFC IP MRG S+P Sbjct: 150 LQEQRTIFKPAAVNPLSDAMRSAV--TPRHFAYLKISEGCDRLCTFCAIPKMRGKHFSKP 207 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +++ EAKRL D+GV+E+++++QDT+ YG+D GEP ++ +++ + Sbjct: 208 IEQIIDEAKRLGDSGVREVVIVAQDTTYYGMD-------RYGEPRLNQLLKELDKIESID 260 Query: 231 IWTRLHYVYPYPHVDDVI--PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W RL Y YP ++DD + L + +I+PY+D+PLQHAS ++LK M R + Q + Sbjct: 261 -WIRLMYFYPM-YIDDALIDTLASARRIVPYIDMPLQHASDKMLKRMARKTTRSLQTDIV 318 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ R L +R+T I GFPGETEEDF L+DF++E+R + +G F YS E A LP Sbjct: 319 QKLRSRIDSLVMRTTMITGFPGETEEDFVELMDFVQESRFENLGVFTYSIEEDTPAARLP 378 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID-EVDEEGA--IGRSMADAPE 405 ++V EV R + M+LQQQI+ + +VG V+ID E+ E+ IGR+ ++AP+ Sbjct: 379 NRVDPEVAARRRDDLMELQQQIAFDWNDSRVGGTEEVLIDAEMPEQDNVFIGRTRSEAPD 438 Query: 406 IDGAVYLNG---ETNVKPGDILRVKVEHADEYDLWGS 439 +DG +Y++ ++ V+ G I ++ + YDL + Sbjct: 439 VDGLIYVSQVDPDSPVEVGQIRPCEIVASQGYDLVAA 475 >UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBM1_FUSMR Length = 445 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 186/446 (41%), Positives = 266/446 (59%), Gaps = 25/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ +SLGC KNLVDSE L L + + ++ +AD+VIVNTCGFI A +ES+E I Sbjct: 2 KLALISLGCSKNLVDSEHYLGILSKRKEMELTSELSEADIVIVNTCGFIGDAKEESIETI 61 Query: 68 GEA--LNENG---KVIVTGCLGAK-EDQIREVHPKVLEITGP---HSYEQVLEHV--HHY 116 E E G K+IV GCL K ++I + P+V + G E+V++ + + Sbjct: 62 LEVSEFKETGNLKKLIVAGCLAQKYSEEILKELPEVDAVIGTGDIDKIEKVVDEILENKK 121 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 V + K+ FL+ + V T H AYLKISEGCN CT+CIIP MRG L SR I +++ Sbjct: 122 VVETKNMTFLANANTERVLTTASHTAYLKISEGCNRACTYCIIPQMRGRLRSRSIEDIVE 181 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 EAKRLV +GV+EI +++Q+T+ YG+D + + + M LC ++ L W R + Sbjct: 182 EAKRLVASGVREINLLAQETTEYGID------LYGDKKLAALMKELC-KIEGLK-WLRTY 233 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y++P D++I +M +E KI Y D+P+QH S IL+ M R S ++ + + R+ Sbjct: 234 YMHPEYVTDELIEVMKSEEKICKYFDVPIQHVSDNILRNMARAKSGEQVKDVLNRIRKAI 293 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 PE T+R+T IVGFPGETEE+FQ L+D+++E D G FKYS E A LP+QVPEE+ Sbjct: 294 PEATIRTTLIVGFPGETEENFQELMDYVREFEFDYAGVFKYSREEDTVAYNLPNQVPEEI 353 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYL 412 KE+R+ + LQ +I+ + + +G EI V+ID V E GR+ A EIDG V L Sbjct: 354 KEKRYAELVNLQSEIAERKNRRLLGEEIEVMIDGVSSESEYLLEGRTRGQALEIDGKV-L 412 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 + KPG+I++VK E EYD G Sbjct: 413 TTDGTAKPGEIVKVKFEQNFEYDFVG 438 >UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Ruminococcaceae RepID=C7H912_9FIRM Length = 441 Score = 310 bits (793), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 186/450 (41%), Positives = 257/450 (57%), Gaps = 32/450 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI +SLGCPKN VD + ++ L + G++ V +AD+++VNTCGFI+SA E++E I Sbjct: 2 KIACISLGCPKNQVDLDVMVHILLSAGHETVADLGEADVILVNTCGFIESAKTEAIENIL 61 Query: 69 EAL-----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 EA N KVIVTGCL + QI E P+V + G S + + V H Sbjct: 62 EACAYKQQNPELKVIVTGCLAERYRSQIEEEIPEVDAVVGCASNKAIDTIVARLFHGENH 121 Query: 123 NPFLSL---VPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 P G ++ TP HYAYLKI+EGCN+RC +C IP +RG L SR + + ++E Sbjct: 122 LESYGAKKDFPLGGKRVIGTPAHYAYLKIAEGCNNRCHYCAIPGIRGPLHSRDLADCVAE 181 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-----W 232 A+ L GVKE++V++QD +AYG D G+P S+CE L KL W Sbjct: 182 ARWLAGEGVKELIVVAQDPTAYGEDW--------GKPG-----SICELLDKLNKVPGLEW 228 Query: 233 TRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ Y YP DD I M K++PYLD+P+QH + ILK M R + L I + Sbjct: 229 IRIMYAYPERITDDFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRRSTRAELLEVIGKL 288 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P +TLR+T I GFPGETEE F+ L +F+KE R DR+GCF YS E A + Q+ Sbjct: 289 RREIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVRFDRLGCFAYSAEENTVAAKMDGQI 348 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGA 409 +E K+ R MQ+Q I A++ EKVG+ + V+ D +DEE + R+ DAPE+DG Sbjct: 349 DQETKDRRAELVMQIQTGIMAQKQAEKVGQTVRVLCDGIDEESGLYLCRTTGDAPEVDGN 408 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGS 439 V ++ E + PG V VE +D YDL+G+ Sbjct: 409 VCVSSEEPLYPGQFYDVLVEDSDLYDLYGT 438 >UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RIMO_ACIBL Length = 504 Score = 310 bits (793), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 190/494 (38%), Positives = 272/494 (55%), Gaps = 72/494 (14%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T K+GFVSLGCPKNLVDSE ++ L T G ++ +DAD+++VNTC FID+A QES+ Sbjct: 16 TKPKKVGFVSLGCPKNLVDSEVMMGLLATNGAEITARAEDADIIVVNTCSFIDTAKQESV 75 Query: 65 EAIGE-----ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I E A K+IV GCL + ++I++ P+V + G E +L Sbjct: 76 DTILEMAGHKATGRAQKLIVAGCLVERYRNEIQKNIPEVDAVVGTGELEAILAASGIEPR 135 Query: 119 KPKHN-PFLSL---------------VPEQGVK--------------------------- 135 K + N PF+ L PE + Sbjct: 136 KSEANSPFVILNSTSASQQLKSGIADRPEGAAREEAGRFARTDWDGAVADLPNYLYDENT 195 Query: 136 ----LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILV 191 TP++ AY+K++EGC+H C+FCIIP +RG SR V++EA+RL GVKEI + Sbjct: 196 PRVLATPKYMAYIKVAEGCDHPCSFCIIPQLRGKFRSRRFESVVAEAERLAKQGVKEITL 255 Query: 192 ISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHYVYPYPHVDDVIP 249 I QDT+ YG D+ G +G + L E+L+++ W R Y YP ++ Sbjct: 256 IGQDTTCYGEDL----GLKDG------LAQLLERLAQIEELQWVRFLYAYPNKITKRLLQ 305 Query: 250 LMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGF 308 +A+ KI Y+D+PLQH++ +LK MKR D L I++ R + P+LTLR++FIVGF Sbjct: 306 TIADNPKIPKYMDVPLQHSAANVLKRMKRGAHGDIFLKSIEEMRRVIPDLTLRTSFIVGF 365 Query: 309 PGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQ 368 PGETEEDF L +F+K A++D +G F YS EGA A AL ++VP E R + M LQ+ Sbjct: 366 PGETEEDFNQLCEFVKAAQIDWLGVFSYSDEEGAKAFALDEKVPPREIERRRKKLMSLQK 425 Query: 369 QISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLNG---ETNVKPGD 422 QIS ++ + +GRE VI++ EE + GR+ APEIDG VY+N NV+PG Sbjct: 426 QISKKKRKALIGREFDVILEGPSEETDLLWEGRTAMHAPEIDGKVYINDFAEHENVEPGQ 485 Query: 423 ILRVKVEHADEYDL 436 + R ++ A +YDL Sbjct: 486 VFRCEITEAHDYDL 499 >UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Bdellovibrio bacteriovorus RepID=RIMO_BDEBA Length = 457 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 183/459 (39%), Positives = 267/459 (58%), Gaps = 23/459 (5%) Query: 1 MSKVTPQ-PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 M + T Q K+ F+SLGCPKNLVDSE + L +GY+VV D AD VIVNTCGFI+ + Sbjct: 1 MKQETAQNKKVHFISLGCPKNLVDSEIMAGTLMKDGYEVVGEADQADTVIVNTCGFIEDS 60 Query: 60 VQESLEAIGEA--LNENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV 113 +ES++ I + L + GK V+V GCL + +D + E P+ G ++ + + + Sbjct: 61 KKESIQRILDMSDLKQEGKIKKVVVAGCLTQRYKDDLVEGLPEADLFVGSGEFQNIAKIL 120 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPR------HYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + K F +L + TPR H AYLKISEGC RC FC IP +RG+L Sbjct: 121 KNSDEGEKQKTFFNLPTYLQEEATPRVNSQPGHRAYLKISEGCMKRCAFCAIPLIRGNLQ 180 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I +++EAK LV GVKE+++IS D + YG D++ + PV+ ++ +Q+ Sbjct: 181 SRSIDAIVAEAKLLVAGGVKELIIISHDFTDYGFDIRRKDPTRKESPVE--LLKALDQVE 238 Query: 228 KLGIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 L W RL Y+YP +++ ++ KI+ Y D+PLQH + ++LK M R + D Sbjct: 239 GLQ-WIRLMYLYPDGITQEMVQVIKNSTKIVKYFDMPLQHVNDQVLKSMNRKMTRDEIET 297 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + RE PE +R+ FIVGFPGET+E F+ LL+F+ E + DRVGCFKYSP E Sbjct: 298 ALMNIREHLPEAVIRTQFIVGFPGETQEQFEELLNFVAEQQFDRVGCFKYSPEENTPGGR 357 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADA 403 + +Q+ EE K+ R + M++QQ IS E+ + VG+ + VI++ EE + GR A Sbjct: 358 MENQIDEETKQYRHDALMEVQQNISREKHSDFVGKTLQVIVEGFSEETDLLLQGRFWGQA 417 Query: 404 PEIDGAVYLN-GETNVKPGDILRVKVEHADEYDLWGSRV 441 P+IDG V +N G+ V GD+++V + EYDL G V Sbjct: 418 PDIDGVVLINDGQAQV--GDMVKVHITDNMEYDLIGEIV 454 >UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L7_9BACT Length = 434 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 181/440 (41%), Positives = 256/440 (58%), Gaps = 25/440 (5%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--EA 70 +SLGCPKN VDSE + L G+ +V S ++AD+ +VNTCGF+ +AV+E ++ I E Sbjct: 7 ISLGCPKNAVDSEHLGGVLEAAGFRLVGSAEEADVALVNTCGFLQAAVEEGIQVILDLER 66 Query: 71 LNENG---KVIVTGC-LGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 L + G ++ V GC L D+++ P V + +L + VP + L Sbjct: 67 LKKAGVVRQIAVVGCMLNRYGDELKAEFPTVDFWAKSEDWGALLREMGRGVPAAAESGCL 126 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 + TP YLKISEGCN RC++C IP +RG L S P+ +++ EA+RLVD G Sbjct: 127 ----RADLAGTP-WTRYLKISEGCNSRCSYCAIPGIRGRLRSVPVEQIVGEARRLVDEGA 181 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 KE+ ++ Q+ S YG D+ G P ++ E+ G+W RL Y++P VD Sbjct: 182 KELCLVGQELSIYGSDL-------FGRPSLPRLLDELEKELPRGVWLRLFYLHP-SLVDA 233 Query: 247 VI--PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI-KQWREICPELTLRST 303 V + A ILP+LDIP+QH +L+ M RP V+R + + + REI P+ R+T Sbjct: 234 VFLERVAASPVILPWLDIPIQHVDDDVLRRMNRP-PVERHIRELFARGREINPDFAFRTT 292 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRF 363 +VGFPGET F LLDF++E DR+G F YSP +G A + PDQ+PEE K R+N Sbjct: 293 LMVGFPGETRAQFDKLLDFVEEIGFDRLGAFPYSPEDGTPAASFPDQIPEEEKTARYNEL 352 Query: 364 MQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYLNGETNVKPG 421 M+LQ+Q+S R VG E+ V+IDEVDEE +GRS DAPEIDG V + G +PG Sbjct: 353 MELQRQVSLTRQAHFVGHELNVLIDEVDEETGERVGRSFRDAPEIDGVVTVTGAGRARPG 412 Query: 422 DILRVKVEHADEYDLWGSRV 441 D++RVK+ + EYDL G + Sbjct: 413 DMIRVKITASSEYDLSGEAI 432 >UniRef50_Q0AXI3 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RIMO_SYNWW Length = 439 Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 174/446 (39%), Positives = 274/446 (61%), Gaps = 29/446 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 IGF+SLGC KN VD+E ++ L+ G+ +V S + AD+V+VNTCGFI A +ES+EAI E Sbjct: 3 IGFISLGCSKNRVDTEVMMAALKKAGHRIVNSLERADLVVVNTCGFITPAKEESIEAIIE 62 Query: 70 A--LNENGKV---IVTGCLGAKEDQIREVHPKVLEITGPHSYEQV--LEHVHHYVPKPKH 122 L + G + I GCL + RE+ ++ E+ G V + V + + + + Sbjct: 63 TAELKKKGSLQFLIAAGCLSQRYG--RELLLEIPELDGVFGISSVSSIAGVVNRIAQGER 120 Query: 123 NPFLSLVP----EQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 F P E+G ++ TP AYLKISEGCN+ C++C+IPS+RG L SR I E+L+ Sbjct: 121 VCFTEATPTEYFEKGHRILTTPPGSAYLKISEGCNNSCSYCVIPSIRGKLRSRQINELLN 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTR 234 EA +L+ G+KE+++++QDTSAYG D+ ++++ +L +LSKL G+ W R Sbjct: 181 EAAQLLKMGIKELVLVAQDTSAYGHDISP----------QSALPTLLRELSKLDGLEWIR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y++P DD+I ++A E K+LPYLDIP+QHAS +ILKLM R I + R Sbjct: 231 LMYLHPLYLSDDIIDVVAYENKVLPYLDIPIQHASSKILKLMHRRHDNSHLRTMISKLRA 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P LTLR+T ++GFPGE E+DF L +F+ E++ D +G F + P EG+ A LP+Q+ + Sbjct: 291 RIPNLTLRTTVMLGFPGEEEKDFAELYEFVAESQFDWLGAFSFVPEEGSKAALLPNQIED 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVG-REILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 E+K ER ++ ++LQQ+I+ ++ ++ +E ++I ++ + +GR+ APE+DG + Sbjct: 351 EIKAERKDKILRLQQKITRQKNLARINTQEKVLISSQLSKNLFVGRTYFQAPEVDGLTLV 410 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 + + GD + V++ YD+ G Sbjct: 411 KTDFKLTKGDFVDVQLVGVRNYDMIG 436 >UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Cystobacterineae RepID=RIMO_MYXXD Length = 476 Score = 304 bits (778), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 176/453 (38%), Positives = 274/453 (60%), Gaps = 32/453 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M TP+ + ++LGCPKN VDSE +L LR GY +V DA +++VNTC FI A Sbjct: 1 METTTPK-SLYMMTLGCPKNRVDSEVMLGTLRHRGYTLVQEASDAQVIVVNTCAFIGPAK 59 Query: 61 QESLEAIGEA--LNENG---KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV- 113 QES+++I E L ++G ++VTGCL + +++ + P+V G +Y Q+ + + Sbjct: 60 QESVDSILEMAELKKSGACKTLVVTGCLSQRYGEELSKEMPEVDHFLGTSAYAQIGDLLA 119 Query: 114 -----HHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 +P P ++ + P++ AYLKISEGC++ C FCIIP++RG S Sbjct: 120 AEASPRQVIPDPD---YIHDANTPRINSMPKYTAYLKISEGCDNACAFCIIPTLRGGQRS 176 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RPI ++++EAK+L D+GV+E+ +++QD +AYG D+ R H+ L + L + Sbjct: 177 RPIDDIVAEAKQLADSGVQELNLVAQDLTAYGHDLPGRPKLHD----------LLKALVQ 226 Query: 229 LGI-WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 + + W RLHY YP D++I +MA E KI YLD+P+QH S ++L MKR + + Sbjct: 227 VDVKWIRLHYAYPRIFPDELIEVMASEPKIARYLDMPVQHVSDKLLLSMKRGRNSEFLKG 286 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + RE P L +R++ IVG PGETEEDF+ML +F+K R +R+G F+YS EG A Sbjct: 287 LLTKLRERVPGLVMRTSLIVGLPGETEEDFEMLKEFVKTQRFERLGVFQYSDEEGTAAYD 346 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADA 403 LPD+VP+++ E RW M +Q++I+ E+ ++ VG+ + V+++ E +GR A Sbjct: 347 LPDKVPQKLIERRWREVMAIQKRINREQNKKLVGKRLEVLVEGPAPETEHLLVGRHQGQA 406 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 P+IDG VY+N + PG+I+ V+V A +YDL Sbjct: 407 PDIDGMVYIN-DGLAYPGEIVTVEVTEAHDYDL 438 >UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP61_9FIRM Length = 446 Score = 303 bits (777), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 188/457 (41%), Positives = 257/457 (56%), Gaps = 47/457 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 I +SLGCPKN VD++ L EG+ V +AD++IVNTCGFI+SA E++E I Sbjct: 2 NIAIISLGCPKNQVDADVFCHALLKEGHTTVADPAEADVIIVNTCGFIESAKAEAIENIL 61 Query: 69 EAL-----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQV-----------LE 111 A N + KVIVTGCL + + QI + P+V + G S + Sbjct: 62 MACQYKQQNPDLKVIVTGCLAERYKQQIVQEIPEVDAVIGIGSNAAIPAIVARVCAAGAG 121 Query: 112 HVHHYVPKPKHNPFLSLVPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 V Y PK S +P G ++ TPRHYAYLKI+EGCN+RC +C IP +RG L SR Sbjct: 122 QVESYGPK-------SDMPLGGARVISTPRHYAYLKIAEGCNNRCHYCAIPLIRGPLRSR 174 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 PI + ++EA+ L GV+E+++++QD +AYG D G+P ++CE L +L Sbjct: 175 PIEDCVAEARWLAGEGVRELILVAQDPTAYGEDW--------GKPG-----AVCELLDRL 221 Query: 230 ----GI-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDR 283 GI W R+ Y YP D I M K++PYLD+P+QH +LK M R G Sbjct: 222 QQIDGIRWIRILYAYPERISDAFIAAMVRNTKVVPYLDLPIQHCDDAVLKAMNRRGGRAD 281 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 I + R P +TLR+T I GFPGETEE + L DF+K R DR+GCF YS E Sbjct: 282 IEDAIARLRAAIPGITLRTTLIAGFPGETEEQYAELCDFVKTMRFDRLGCFAYSAEENTV 341 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIG--RSMA 401 A + Q+ EE K+ R + M+LQ ++SA+R +EKVG+ + I D VD+E + RS A Sbjct: 342 AAKMDGQLDEETKQRRADHIMELQAEVSADREKEKVGQTLECICDGVDDETGMYLLRSKA 401 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 D PEIDG V +T ++ G V + AD YDL+G Sbjct: 402 DCPEIDGNVLTPADTLLETGAFYNVTITDADTYDLYG 438 >UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RIMO_MOOTA Length = 432 Score = 303 bits (777), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 184/446 (41%), Positives = 268/446 (60%), Gaps = 36/446 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 ++ ++LGCPKN V+SE +L L +VV A++VI+NTC FI +A +E+L+ I Sbjct: 3 RVAVITLGCPKNQVESEYMLGILEKNHLEVVSDPRQAEVVIINTCSFITAAREEALDTIL 62 Query: 69 EALNENG--KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHY--------V 117 E ++IV GCL + ++ + P+ GP + ++ E ++ V Sbjct: 63 ELARAANHPRLIVAGCLAQQYASELWQELPEAAAFIGPGATGRLPEIINRVLKGERVLDV 122 Query: 118 PKPKH-NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 P P+ L + E G + +AYLKI+EGCN+RCT+C IPS++G SRP+ +V++ Sbjct: 123 PGPEMITGELPRLIEDG-----KPFAYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVA 177 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTR 234 EA L G+KE+++++QDT+AYG+D + + L +L+++ GI W R Sbjct: 178 EAVSLAARGIKELVLVAQDTTAYGLDCYG----------EYRLPELLRRLARIEGIEWVR 227 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y YP ++I +MA E ++PYLD+PLQHAS +L+ M RPG+ L I+ R Sbjct: 228 LLYAYPTRITPELIEVMATEPGVVPYLDLPLQHASEGVLRRMGRPGTGAAGLRAIESLRR 287 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 PE+T+RSTFIVGFPGE EEDFQ+LLDFL +ARLD VG FK+SP EG A +LP QVPE Sbjct: 288 AIPEITIRSTFIVGFPGEEEEDFQILLDFLTDARLDWVGAFKFSPEEGTIAASLPGQVPE 347 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 EVKEER+ R M QQ I+ + +GRE+ V+ E +GRSM APE+DG VY+ Sbjct: 348 EVKEERYQRLMLHQQSITRACNEGWLGREVQVL----KEGPEVGRSMRQAPEVDGVVYVK 403 Query: 414 GETNVKPGDILRVKVEHA-DEYDLWG 438 G+ + G ++ VK+ + YD G Sbjct: 404 GDPS-PAGSMVTVKLTQLYNIYDFLG 428 >UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO n=26 Tax=Bacteria RepID=RIMO_ALKMQ Length = 446 Score = 303 bits (777), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 171/442 (38%), Positives = 269/442 (60%), Gaps = 29/442 (6%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE---- 69 SLGC KNL+D+E +L L GY + + AD++IVNTCGFI++A +ES+ I E Sbjct: 9 SLGCSKNLIDAEVMLGILNQYGYKLTNNEVKADVIIVNTCGFIEAAKEESINKIIELGQL 68 Query: 70 ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK------- 121 ++ +IV GCLG + + + E P+V I G Y ++++ +H + + Sbjct: 69 KKDKLKLLIVAGCLGERYQKDLLEELPEVDAIVGTGGYHEIVKVIHQTMKGQRIVEIGDI 128 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + P+ +P ++ T H AY+KIS+GC++ CT+CIIP +RG SR + ++ EA+ L Sbjct: 129 NRPYDETLPR--IQTTASHSAYIKISDGCDNYCTYCIIPKLRGKYRSRKMENIIQEAQTL 186 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLHYVY 239 + GVKEI++I+QDT+ YG+D+ + + +L ++LS++ GI W R+ Y Y Sbjct: 187 ANNGVKEIILIAQDTTRYGIDLYD----------EYRLSALLDKLSEVEGIQWIRILYCY 236 Query: 240 PYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D++I + K+ Y+DIP+QH S +ILKLM R S + ++ I++ ++ P + Sbjct: 237 PEMITDELIATIKNNDKVCKYIDIPIQHCSTKILKLMNRRTSKEEIVSLIEKLKKNVPNI 296 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 +R++ IVGFPGE+EEDF L F+++ + DR+G F YS EG A L +QVP E+KE Sbjct: 297 VIRTSIIVGFPGESEEDFNELKAFIEDIKFDRLGVFTYSQEEGTPAAQLAEQVPSELKES 356 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDE--VDEEGAIGRSMADAPEIDGAVYLNGET 416 R M+LQQ+IS + + +G+ I V+I+E ++ +GRS DAPEIDG VY+ Sbjct: 357 RQKILMELQQRISLNKNRLYIGQSIEVLIEEEIAEKTEYLGRSQGDAPEIDGIVYVKSTV 416 Query: 417 NVKPGDILRVKVEHADEYDLWG 438 + G I++VK+E+A EYDL G Sbjct: 417 PLCVGQIVKVKIENALEYDLMG 438 >UniRef50_A7NIS8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Chloroflexi (class) RepID=RIMO_ROSCS Length = 482 Score = 303 bits (776), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 177/472 (37%), Positives = 252/472 (53%), Gaps = 48/472 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA-- 66 K+ ++LGCPKN VDSE + L +G+ + S DDAD+VIVNTC FI +A +E+L Sbjct: 3 KVHIITLGCPKNQVDSEGMSGILAAQGHTLAASADDADVVIVNTCSFIAAAREETLAVLR 62 Query: 67 -IGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 + +++ GC+ I P V G + ++ E V + P P Sbjct: 63 DVAACKTPEQRLVAAGCMAESHRAIVAATPGVDATLGTREWTRIAEVVETFQPAATMAPL 122 Query: 126 LSLVPEQGVKLT--------------PRHY----------------AYLKISEGCNHRCT 155 + + + LT P Y AYLKIS+GCN RC Sbjct: 123 NAASAREIIPLTSAGVPSPAPHDLSVPGAYADWRTAPIRRRAVGPSAYLKISDGCNLRCA 182 Query: 156 FCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPV 215 FC IPS +GD+ S+ IG +L EA+ L AGVKEI++++Q + YG D+ G +G + Sbjct: 183 FCTIPSFKGDMRSKAIGAILGEAQELAAAGVKEIVLVAQHLTDYGRDL----GLKDG--L 236 Query: 216 KTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKL 274 + +C L + +W RL Y YP+ + +I MA +I YLD+PLQHA P L+ Sbjct: 237 AILLDEICAVLPE-NVWVRLMYAYPHGIGERLIATMARHPQICHYLDMPLQHAHPETLRR 295 Query: 275 MKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF 334 M+RP DR I R P++ +RSTFIVGFPGET +F+ LL FL++ + DRVG F Sbjct: 296 MRRPPDTDRTRRLIDDLRAAIPDIAIRSTFIVGFPGETNTEFRALLAFLEDVQFDRVGVF 355 Query: 335 KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 +YS G A ALPDQ+ + E RW+ M+LQQ+IS ER + +GR + V+++ + Sbjct: 356 RYSREPGTPAAALPDQLAPRIIERRWHEIMRLQQRISRERNRRWLGRVVRVLVEGQGQTD 415 Query: 395 -----AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++GRS DAPE+DG V G PG + V+V A +YDLWG V Sbjct: 416 DGRMLSVGRSFRDAPEVDGQVLFWGAAT--PGTFVDVRVTQALDYDLWGDVV 465 >UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO n=65 Tax=Bacteria RepID=RIMO_CLOB8 Length = 465 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 173/449 (38%), Positives = 270/449 (60%), Gaps = 26/449 (5%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + + K+G VSLGC KN VDSE IL ++ E Y++ + +AD++IVNTCGFI+SA QES+ Sbjct: 20 SSKYKVGMVSLGCDKNRVDSEIILGKMSDE-YEITNNPKNADIIIVNTCGFIESAKQESI 78 Query: 65 EAIGEALNE--NGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I E N N K +I TGCL + ++++ + P++ + G + Y ++ E + ++ Sbjct: 79 DTILEMANYKINYKCKLLIATGCLTQRYGEELKTLIPEIDIMLGVNDYNKINEIITEFID 138 Query: 119 KPKHNPFLSLVPEQGVK------LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K L ++ + T R AY++I+EGCN+ CT+CIIP +RG SR + Sbjct: 139 GNKLATELLNYSDENINEGKRIITTQRESAYIRIAEGCNNFCTYCIIPKIRGKFRSRKME 198 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI 231 +++EA+ L ++GVKEI++I+QDT+ YG D+ + H L ++LSK+ GI Sbjct: 199 NIINEARDLSESGVKEIILIAQDTTLYGSDIYGKKNLH----------VLLKELSKIEGI 248 Query: 232 -WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W R+ Y YP D++I +A K++ YLDIP+QH S +ILKLM R S + +I+ Sbjct: 249 EWIRVLYCYPEEIYDELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSKKDIINKIQ 308 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 RE PE+ +R+TFIVGFP ET+EDF ++DFLKE +L++VG F YS E A + Sbjct: 309 ILRERVPEIVIRTTFIVGFPNETDEDFNEIIDFLKEYKLEKVGAFTYSQEEDTPAAKMDG 368 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGA 409 Q+ EE+KE+R M LQ+ IS E + K+G+ ++++ + + GRS AP+ID Sbjct: 369 QIDEEIKEKREEDLMLLQKNISEEINKLKIGKLYDILVEGYNGKCYYGRSYEMAPDIDAN 428 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V ++ G+ ++VK+ +YDL G Sbjct: 429 VLFESNAKIENGEFVKVKIVETMDYDLVG 457 >UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO n=52 Tax=Bacteroidetes/Chlorobi group RepID=RIMO_GRAFK Length = 450 Score = 301 bits (771), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 179/448 (39%), Positives = 269/448 (60%), Gaps = 31/448 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 +K + +I V+LGC KN+ DSE ++ +L+ DVV +D ++V++NTCGFID+A + Sbjct: 3 TKSLKKNRINVVTLGCSKNVYDSEILMGQLKANDKDVVHE-EDGNIVVINTCGFIDNAKE 61 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGA--KEDQIREVHPKVLEITGPHSYEQVLEHVH 114 +S+ I E + + KV VTGCL K D +E+ P V + G +L + Sbjct: 62 QSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEI-PDVDQYFGTTELPGLLSALE 120 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 KH L+ E+ + TP++YAYLKI+EGC+ C+FC IP MRG S PI + Sbjct: 121 ---ADYKH----ELIGER-LTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENL 172 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-W 232 ++EA++L GVKE+++I+QD + YG+D+ K ++ L E L K+ GI W Sbjct: 173 VTEAEKLAANGVKELILIAQDLTYYGLDLYK----------KRNLAELLENLVKVEGIEW 222 Query: 233 TRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 RLHY +P DV+ +M E K+ YLDIPLQH S +LK M+R + ++ +K++ Sbjct: 223 IRLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEF 282 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R+ PE+ +R+T IVG+PGETEE +Q L +++KE R +R+GCF YS E A L D V Sbjct: 283 RKTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDV 342 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 P+EVK+ER N M++Q QIS E Q+K+G V+ID + IGR+ D+P++D V Sbjct: 343 PQEVKQERANEIMEIQSQISWELNQQKIGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVL 402 Query: 412 LNGET-NVKPGDILRVKVEHADEYDLWG 438 ++ T +K GD VK+ A ++DL+G Sbjct: 403 IDATTVYLKTGDYYDVKIAEAADFDLYG 430 >UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Clostridiales RepID=RIMO_DESHY Length = 445 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 177/454 (38%), Positives = 270/454 (59%), Gaps = 29/454 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T K+ V+LGCPKN VDSE I+T Y +V + AD++I+NTC FI+SA ES+ Sbjct: 3 TLNKKVAVVTLGCPKNQVDSE-IMTGHMMTKYQIVNEPEQADIIIINTCTFIESAKAESI 61 Query: 65 EAIGEA--LNENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I + E G+ ++ TGCL + D++ P++ I G + ++LE + Sbjct: 62 DMILQMSQYKEEGQCQTLVATGCLAQRYGDELLAEIPELDGIMGTGNVAEILETLEE-AE 120 Query: 119 KPKHNPFLSLVPE-------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K K + P V+L+P+ YAY+K++EGC++ CT+CIIP +RG SR Sbjct: 121 KSKVRRISAEAPAFIYDETMPRVRLSPKQYAYVKVAEGCDNYCTYCIIPHVRGHFRSRTQ 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-G 230 +L E + + GVKE+L+I+QDT+ YG K R G + + SL ++++++ G Sbjct: 181 ESILREVEAMASEGVKEVLLIAQDTTRYG---KDRYGEYR-------LPSLIKEIARIEG 230 Query: 231 I-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 I W RL Y YP D++I +M E K+ YLD+PLQHA ++L M R G++ I Sbjct: 231 IEWIRLMYCYPELFTDELITVMKETPKVCRYLDLPLQHAHDKVLAEMNRRGTIREAEGLI 290 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R+ P++ LR+T I GFPGETEE+FQ +++F K+ R DR+G F YS E A Sbjct: 291 HKLRQEIPDIRLRTTMITGFPGETEEEFQAVVEFAKKIRFDRLGAFAYSQEESTPAAQRE 350 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE-VDEEGAIGRSMADAPEID 407 DQVPEE++++R ++ M+LQ I+ E+ Q VG+ + V+I+E + ++ +GRS DAPEID Sbjct: 351 DQVPEEIRQQRRDQLMELQHDIAYEQQQRWVGQTLKVLIEEALPDQRWVGRSEGDAPEID 410 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G VY++ ++ GD + VK+ AD YDL G V Sbjct: 411 GVVYVDSPGELEIGDFVLVKITRADSYDLMGEVV 444 >UniRef50_A8UT74 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UT74_9AQUI Length = 422 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 177/444 (39%), Positives = 261/444 (58%), Gaps = 34/444 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G +SLGC KNLVDSE +L L++ G ++ + AD ++VNTCGFI+ A +ES++ I Sbjct: 2 KVGVISLGCSKNLVDSEILLARLKSAGVELTSDIESADCIVVNTCGFIEDAKRESIDTIL 61 Query: 69 EALNENGKVIVTGCLGAKEDQIREVHPKVLEITG---PHSYEQVLEHVHHYVPKPKHNPF 125 EA++ KV+V GCL E +E+ ++ E+ G S++++L+H+ +PK++ Sbjct: 62 EAIDTGKKVLVMGCL--VERYRKELEKELTEVEGFFGTQSWDEILKHLGL---QPKYSAP 116 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 L+ TP YAY+KI+EGCN C+FC IP +RG +SRP+ +++SE K L G Sbjct: 117 YRLLT------TPTSYAYVKIAEGCNRLCSFCAIPKIRGRHLSRPVEDIVSEVKDLASRG 170 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYVYPYPHV 244 VKEI ++SQDT+ YG D+ L E GI W RL Y+YP Sbjct: 171 VKEIDIVSQDTTYYGKDLYREY---------RLTELLKELEEVEGIEWIRLLYLYPTEVS 221 Query: 245 DDVIPLMAEG-KILPYLDIPLQHASPRILKLMKR---PGSVDRQLARIKQWREICPELTL 300 D +I + + K+LPY D+P+QH S ++LK M+R G V R + +I R PE L Sbjct: 222 DQLISYIRDSEKVLPYFDMPIQHISSKVLKSMRRGYDEGFVRRLIEKI---RSEIPEAVL 278 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 R+T IVG+P E EEDF+ LL+F++E +G F YSP E A L D +P+E+KEER Sbjct: 279 RTTLIVGYPNEDEEDFRRLLNFVEEGHFHWLGVFTYSPEEDTGAFPLGDPLPQELKEERK 338 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLNGETN 417 ++ Q++I+A + VG+ VI+D E + GR+ APE+DGAVY+ E Sbjct: 339 ETLIEAQRKITARKNASLVGKRFKVIVDGFSSEFSFVPKGRAYLHAPEVDGAVYIESEEP 398 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 +K GD + V++ A +YDL G V Sbjct: 399 LKVGDRVEVEITQATDYDLGGRVV 422 >UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF18_BREBN Length = 448 Score = 297 bits (761), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 184/457 (40%), Positives = 275/457 (60%), Gaps = 30/457 (6%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 KV + K+ V+LGC KNLVDS+ + + +GY++V + ++A +VIVNTCGFID+A +E Sbjct: 4 KVGTREKVAIVTLGCEKNLVDSDMMAHLIDEKGYELVDNPEEATVVIVNTCGFIDAAKEE 63 Query: 63 SLEAIGEA--LNENGKV---IVTGCLGA--KEDQIREVHPKVLEITGPHSYEQVL----E 111 S+ I E L E+GK+ +V GCL KED + E+ P+V I G + + E Sbjct: 64 SVNKILEMGELKESGKLKSLVVAGCLTQRYKEDILNEI-PEVDGIVGTGDFMSITGIIEE 122 Query: 112 HVHHYVPKPKHNPFLSL--VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + P NP + V ++ VK + AY+KI+EGC++ CTFC IP MRG SR Sbjct: 123 SLEGKRPIFVGNPIFTYEDVVKRKVK-QGTYTAYIKIAEGCDNACTFCSIPLMRGGFRSR 181 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 I ++ EA+ L GV E+ +I+QD++ YG D+ ++G K + L +L+++ Sbjct: 182 TIESIVEEARHLAAQGVVEVSLIAQDSTNYGTDI------YDG---KLMLPELLNRLAEV 232 Query: 230 -GI-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 GI W RLHY YP D++I A K+ Y+D+PLQH+ ILK M+RPG A Sbjct: 233 EGIEWIRLHYAYPGFFTDELIHTFATNPKVCKYVDMPLQHSEDHILKRMRRPGRQTDIRA 292 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R P++ LR++ IVGFPGETEEDF+ L +F+K+ R DR+G F YS + A+ Sbjct: 293 LVAKIRAQVPDVALRTSLIVGFPGETEEDFERLSEFVKDIRFDRLGVFTYSNEDDTPASR 352 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAP 404 LPD V EEVKE+R N M++Q++++ +R VG+ + V+I+ + I GR+ DAP Sbjct: 353 LPDHVDEEVKEKRANMLMEIQREVAGDRNGRFVGQVLDVLIERYEGRNDIYVGRTQYDAP 412 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 EIDG V++ G + G +++VK+ H+ EYDL G V Sbjct: 413 EIDGEVFVTGFKG-ELGTVVKVKITHSYEYDLAGEVV 448 >UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Aquificales RepID=RIMO_SULSY Length = 430 Score = 297 bits (760), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 178/443 (40%), Positives = 271/443 (61%), Gaps = 33/443 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F+SLGCPKNLVD+E ++ +L E + ++AD++++NTCGFI+ A +ES+E I Sbjct: 5 KINFISLGCPKNLVDTEVLIGKLNQENISFTANPEEADVILINTCGFIEPAKEESIETIL 64 Query: 69 EAL----NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 EA+ N N K+IVTGCL + Q E+ ++ E+ + + + KPK N Sbjct: 65 EAVKLKQNSNKKIIVTGCLVERYKQ--ELEKEIPEVDYFIDLKNQSQIPVLFDIKPKENT 122 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + + TP+H AYLKISEGC+H C+FC IP++RG S+PI ++ EAK L + Sbjct: 123 -------KRIISTPKHTAYLKISEGCDHTCSFCAIPNIRGKHRSKPIEALVEEAKYLANL 175 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLHYVYPYP 242 GVKE+ ++SQDTS YG D+ G+P+ + L + L K+ GI W RL+Y+YP Sbjct: 176 GVKELNIVSQDTSYYGYDL-------YGKPM---LFELLQHLEKIDGIKWIRLYYLYPST 225 Query: 243 HVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE-ICPELTL 300 +D + KIL Y+++P+QH+ +ILK M R G ++L +I +W+E P++T+ Sbjct: 226 VDEDFFKFIKGSEKILHYIEMPIQHSEDKILKDMMR-GYRKKKLYQILEWKEKYTPDMTI 284 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA-NALPDQVPEEVKEER 359 RS+ IVG+P ETEEDF+ + +F++EA+ D +G F YS EG A D++P++ K R Sbjct: 285 RSSVIVGYPTETEEDFENMKNFIQEAQFDWLGVFVYSHEEGTPAYQKHKDKIPKKEKIRR 344 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYLNGET 416 N LQ+ I+ ++ + +G+E+ +IID EE IGRS A EIDGAVY+ Sbjct: 345 LNEISALQENITEQKNKSLIGKELDIIIDGFSEEWETLPIGRSYRSAFEIDGAVYVETTE 404 Query: 417 NVKPGDILRVKVEHA-DEYDLWG 438 V GDI++V+++ D+YD+ G Sbjct: 405 PVNVGDIIKVRIKDTIDKYDVVG 427 >UniRef50_A0L887 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Magnetococcus sp. MC-1 RepID=RIMO_MAGSM Length = 487 Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 176/449 (39%), Positives = 258/449 (57%), Gaps = 35/449 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 +G +SLGC KN VDSE++L EGY +V +AD+++VNTCGFI A +ES E+I E Sbjct: 39 VGVISLGCSKNTVDSEQMLGRFVREGYLLVADPLEADLLVVNTCGFIADAERESRESIDE 98 Query: 70 A-----LNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYE-----------QVLEH 112 L + K+IVTGCL + ++ E HP++ + G Y+ Q ++H Sbjct: 99 MAHIKQLYPHKKLIVTGCLSQRYGAKLLEDHPQIDLLLGAGHYDTLIPLLEAKAPQTVDH 158 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 V H+ VP + T AY+KI+EGCN+ CTFCIIP +RG SR + Sbjct: 159 VTEPDAAASHD-----VPR--LITTGESSAYVKIAEGCNNSCTFCIIPKLRGPFRSRTLD 211 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 ++ +E L D G E++++SQDT+ YG D+ R+ + +++ CE W Sbjct: 212 DIAAEVALLTDEGCHELILVSQDTTWYGRDLPQRSSLTE---LLQRILASCE-----APW 263 Query: 233 TRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ Y+YP +++ L+A E ++LPY DIPLQHA ++LK M+R ++ +K Sbjct: 264 IRMLYLYPTLVKKELLQLIAREDRLLPYFDIPLQHADSQVLKRMQRSERLETVRQLVKDV 323 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P+ LRSTFIVGFPGE+E +FQ LLDF++E++LD VG F YS +G A LPD+V Sbjct: 324 RASVPDAILRSTFIVGFPGESEAEFQTLLDFIQESQLDWVGVFTYSDEQGTAAYDLPDKV 383 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGA 409 V E R ++ M LQQ I++ RLQ VG + V+++ DEE A +GR A APE+DG Sbjct: 384 DARVAEARRDQLMALQQPITSARLQRWVGEIVAVLVESYDEEHACFVGRFWAQAPEVDGQ 443 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V + ++ G + V + YDL+G Sbjct: 444 VLIQCNEELEMGIFVPVAITQVLGYDLYG 472 >UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Veillonellaceae RepID=D1BNC4_VEIPT Length = 448 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 177/455 (38%), Positives = 275/455 (60%), Gaps = 33/455 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G+VSLGC KNLVD+E +L LR GY + +AD+++VNTC FI+ A ES+ I Sbjct: 4 KLGYVSLGCAKNLVDTEVMLGLLRDNGYSITEDLSEADLIVVNTCTFIEKAKAESINTIL 63 Query: 69 EA--LNENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVL------EHVHHY 116 E E+G +IV GCL + +D++ + P++ + G +++QV+ EH + Sbjct: 64 EVAQYKEDGACKGLIVAGCLSQQYQDELFQEIPEIDALIGTGAWDQVMVAVDAIEHGNRS 123 Query: 117 -VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + N + +P ++ TPR+ AY+KI+EGCN+ CTFCIIP +RG SR I + Sbjct: 124 CIMENITNIYDERMPR--IQTTPRYSAYVKIAEGCNNGCTFCIIPKVRGAFRSRTIESIK 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E +RL GVKE+++I+QDT++YG+D +NG+P+ T+++ + + W R+ Sbjct: 182 AEVERLAATGVKEVVLIAQDTTSYGID------LNNGKPLLTTLLKELTTVEGIE-WIRM 234 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+YP D+++ ++ E K+ Y+DIPLQH + ILK M R + +K+ R Sbjct: 235 LYLYPTFFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDDRNDIERLLKKIRNA 294 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 +TLR++ IVGFPGET+E F+ L DF+KE + D +G F YS G A A DQ+PEE Sbjct: 295 PTHITLRTSIIVGFPGETDEQFEELCDFVKEIKFDNMGVFTYSQEAGTPAGAREDQIPEE 354 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG------AIGRSMADAPEIDG 408 VKEER++ M +Q IS E ++ G +++E+ EEG A GR + AP++DG Sbjct: 355 VKEERYHVLMSIQAAISEENNRDLEGTIDYAMVEEI-EEGENNTLLAKGRLKSQAPDVDG 413 Query: 409 AVYLN--GETNVKPGDILRVKVEHADEYDLWGSRV 441 +Y+ GE +++PGDIL+V+VE YD+ + V Sbjct: 414 NMYIEDCGE-DIQPGDILKVQVEQGFAYDVVATVV 447 >UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bacteroidales RepID=D1PVJ2_9BACT Length = 443 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 178/445 (40%), Positives = 257/445 (57%), Gaps = 23/445 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVV--PSYDDADMVIVNTCGFIDSAVQESLEA 66 +I FV++GC KNLVD+E ++ + GY V P ++ +VNTCGFID+A +ES+ Sbjct: 5 QIDFVTMGCSKNLVDTEHLMRQFENLGYRCVHDPQRVQGEIAVVNTCGFIDAAKEESINT 64 Query: 67 I---GEALNEN--GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH-HYVPK 119 I EA NE ++ V GCL + +D++ + P+V G +++Q+L+ + PK Sbjct: 65 ILEFAEAKNEGRLKRLYVMGCLSQRYQDELEKTIPEVDRFYGKFNFKQLLQDLGPSEDPK 124 Query: 120 PKHNPFLSLVPE--QGVKLT-PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 F E G KLT PRHYAY+KI+EGC+ C +C IP M G SR + ++L Sbjct: 125 DSDALFTQRRKELSAGRKLTTPRHYAYIKIAEGCDRHCAYCAIPLMTGRHTSRSMEDILE 184 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E K+LV GVKE +I Q+ + YGVD+ +G+P ++S + + W RLH Sbjct: 185 EVKQLVAEGVKEFQIIEQELTYYGVDI-------DGKPRIAELISRMADIPGVK-WIRLH 236 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP +++ +M E + YLDI LQH S +L M R S L I++ R+ Sbjct: 237 YAYPNQFPLELLDVMREKPNVCKYLDIALQHISDHVLSRMLRHVSKAETLELIRKIRQEV 296 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA-DANALPDQVPEE 354 P +TLR+T +VGFPGETEEDFQ LLDF++E R +R+G F YS EG A D VP E Sbjct: 297 PGITLRTTLMVGFPGETEEDFQELLDFVREVRFERMGAFVYSEEEGTYSALHYEDDVPAE 356 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN- 413 VK+ R + M +QQ ISAE K+G+ VIID + +GR+ A +PE+D V + Sbjct: 357 VKQRRLDELMAVQQDISAEIQAAKIGKTFKVIIDRKEGNYYVGRTEASSPEVDPEVLIPV 416 Query: 414 GETNVKPGDILRVKVEHADEYDLWG 438 G+ N++ G VK+ +DE+DL+G Sbjct: 417 GKRNLRTGCFYEVKITDSDEFDLYG 441 >UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2J3_9BACT Length = 452 Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 176/439 (40%), Positives = 254/439 (57%), Gaps = 23/439 (5%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 VSLGC KNLVD+E I L T G + D+AD+ ++NTC FI +A E+ EAI + + Sbjct: 17 LVSLGCSKNLVDTEVIAGTLLTSGRTLAFEPDEADLYVINTCAFIPAARDEAREAIEDGI 76 Query: 72 ----NENGKV-IVTGCLGA--KEDQIREVHPKVLEITGPHSYEQV--LEHVHHYVPKPKH 122 + G++ +V GCL K+ +R+ +P+V TG + ++ L +P+ Sbjct: 77 VWKQEKPGRLLVVAGCLTEWDKDGSVRKEYPEVDLWTGVNQVAEIARLLDRQSTLPENAE 136 Query: 123 NP-FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 P +L ++LT H AYLKI++GCN+RCT+C IP +RG L +RP+ V+ EA+ L Sbjct: 137 EPVYLYDDCTPRLQLTLPHLAYLKIADGCNNRCTYCSIPGIRGRLRTRPMESVVREARNL 196 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVY 239 ++ GV+E+LVI+QD + YG D + +G ++ L L+ L RL Y + Sbjct: 197 IEGGVRELLVIAQDITVYGND-RPESG--------DTLARLLTALNALEGNFVIRLLYTH 247 Query: 240 PYPHVDDVIPLMAEG--KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P + ++ I MA G K+LPYLDIPLQH S RILK M R + + + + RE P Sbjct: 248 PAHYTEEFIDFMARGNTKVLPYLDIPLQHISDRILKQMNRHVTRKQTEELLTKLRERIPG 307 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 LTLR+TFI GFPGETEE++Q L F K+ + +R G F YSP A A PDQVP E+ E Sbjct: 308 LTLRTTFITGFPGETEEEYQELKSFAKKFKFERCGVFPYSPEPRTPAAAFPDQVPAELAE 367 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 +R M+ Q I + + +VG+ + V++D+VDE GA+ R DAPEID +Y+ Sbjct: 368 QRSTELMKQQISIMKKLSKNQVGKTVRVLVDDVDENGAVARGAMDAPEIDNVIYIPKPKR 427 Query: 418 VKPGDILRVKVEHADEYDL 436 +KPG VK+ D DL Sbjct: 428 LKPGKFCLVKITGTDGCDL 446 >UniRef50_A9F1Y8 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Myxococcales RepID=RIMO_SORC5 Length = 488 Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 176/446 (39%), Positives = 264/446 (59%), Gaps = 22/446 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ FVSLGCPKN VDSE +L R G+ V +A++++VNTCGFI A +ES++AI Sbjct: 5 KVHFVSLGCPKNRVDSEVMLGVARAAGFAHVDDAAEAEVIVVNTCGFIGEAKKESIDAIF 64 Query: 69 EALN--ENG---KVIVTGCLGAK--EDQIREVHPKVLEITGPH---SYEQVLEHVHHYVP 118 E E+G +++V GCL + E+ RE+ P+V G +VL + Sbjct: 65 EMAQHKEHGSCKRLVVAGCLSQRHPEELAREM-PEVDHFLGSSDMLKLGRVLAGDAERML 123 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 +L + TP AY+KI+EGCN C+FC+IP +RG SRPI +V+ E Sbjct: 124 VGNPAEWLIQAGDPRTLSTPGGSAYVKIAEGCNRTCSFCVIPDLRGAQRSRPIPDVVREV 183 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLH 236 ++L AGV+EI +ISQDT AYG D R+ G + ++ L E+++ + G+ W RL Sbjct: 184 EQLAAAGVREINLISQDTIAYGRDAAGRS--EGG--ARATLAQLVERVADVPGVRWVRLF 239 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y+YP DD++ L+A +++PY+D+PLQHA+ +L+ M+R DR + RE Sbjct: 240 YLYPETMTDDLVELLAGHPRVVPYVDMPLQHAADAMLRRMRRGHGGDRLRRVVSTLRERV 299 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P+LT R+ FIVG PGET+ +F+ L DF++ A +RVG F+YS E + + L +VP Sbjct: 300 PDLTFRTAFIVGHPGETDAEFEELCDFVRWAEFERVGVFRYSDEEASRSYELEGKVPART 359 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYL 412 R+ R M LQ++IS ++ +GRE+ V+++ +E +GR APEIDG VYL Sbjct: 360 AASRYRRLMTLQRRISHKKSAAMIGRELEVLVEGTSDEHEYVLMGRHAGQAPEIDGQVYL 419 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 +G V+PG++ RV++ A +YDL G Sbjct: 420 SG-GEVRPGEMCRVRITQASDYDLVG 444 >UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT Length = 480 Score = 294 bits (752), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 182/480 (37%), Positives = 270/480 (56%), Gaps = 48/480 (10%) Query: 1 MSKVTPQPK-IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 MS T PK +G +SLGC KNLVD+E +L + ++G + + D+AD++IVNTC FIDSA Sbjct: 1 MSTKTATPKKVGMISLGCAKNLVDAEIMLGGVLSKGMQITSNADEADVLIVNTCAFIDSA 60 Query: 60 VQESLEAIGEALNENG-------KVIVTGCLGAK-EDQIREVHPKVLEITGPHSY----- 106 +ES+EAI EA G ++IV+GC+ + ++ P+V G Sbjct: 61 KEESIEAILEAHESRGLKKRAGQRLIVSGCMAQRFAKELTHEMPEVDAFIGLDQVADAAG 120 Query: 107 --EQVLEHVHHYVPKPKHNPFLSLVPEQG--------------------VKLTPRHYAYL 144 EQV VP K L+ EQ +LTP H A+ Sbjct: 121 IIEQVFSRPAAPVPAAKAKAPDVLLDEQWEPLNLVTRKPVYIPDYDTPRFRLTPAHTAFT 180 Query: 145 KISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVK 204 KI+EGCNH C+FC+IP MRG SR I V++E + LV GVKEI +ISQDT+ +G+D+ Sbjct: 181 KIAEGCNHPCSFCVIPQMRGKHRSRTIESVVAEVRSLVAEGVKEINLISQDTTYFGMDLW 240 Query: 205 HRTGFHNGEPVKT---SMVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILP 258 + + +++ L +L K+ W RL Y +P D++I +AE K+ Sbjct: 241 EEKAGPRQQVDSSRGPTLIKLLRELDKIEGDFWIRLLYTHPAHWSDELIACIAECKKVCR 300 Query: 259 YLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQM 318 Y+D+PLQH PR+L+LM+R S + I + R P + +R+TFIVGFPGET+E+F Sbjct: 301 YIDMPLQHIHPRMLELMRRETSSEHIENLIARIRAGIPGIAIRTTFIVGFPGETDEEFNY 360 Query: 319 LLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEK 378 LLDF++ R +R+G F YS EG+ A + DQVP++VK R+ R M+LQQ+I+ E + + Sbjct: 361 LLDFIERTRFERLGVFTYSQEEGSRAAKMDDQVPQKVKAARYKRAMKLQQKIAREISETQ 420 Query: 379 VGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 VG+ + ++D + + R+ ADAP+IDG + L+ V G+ + V++ YDL G Sbjct: 421 VGQRVRAVVD----QPLVARAAADAPDIDGRILLSSPAPV--GEFIDVEITGTQVYDLVG 474 >UniRef50_Q6MBU9 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Chlamydiales RepID=RIMO_PARUW Length = 475 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 167/446 (37%), Positives = 269/446 (60%), Gaps = 26/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F+SLGCP+NLVDSE +L L GY+V P+ ++AD +++NTCGF++++ QES++ + Sbjct: 37 KINFISLGCPRNLVDSEVMLGILLKAGYEVAPTLEEADYLVINTCGFLEASRQESMDTVE 96 Query: 69 EALNE---NGKVIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLEHVH-----HYVPK 119 E L++ K+IVTGC+ D ++ P + + G E +L+ V + Sbjct: 97 EVLSQRKKTAKLIVTGCMVQTHSDALKTTFPSIDYLLGSGDVEGILKAVQSTQKGQIISS 156 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + VP + TP+HYAYLKI+EGC RC +C+IP+++G L S+ ++L E Sbjct: 157 ARSYLEAGEVPRRLS--TPKHYAYLKIAEGCRKRCAYCVIPTIKGPLKSKGKEQILKEFN 214 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS--KLGIWTRLHY 237 L+ GVKE+++I+QD YG D G T++++L + + K W RL Y Sbjct: 215 LLLSQGVKEVILIAQDLGDYGKD--------QGAKKLTALLNLLQSMLEIKQAFWLRLLY 266 Query: 238 VYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +YP D++I LM ++ +I PYLD+P+QH + +ILK M+R S + + I + R P Sbjct: 267 LYPDEITDELIALMKSDSRICPYLDMPIQHVNNQILKSMRRATSKEDIIEIITKLRREIP 326 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + +R++ IVGFPGETEE FQ L+ F+++ L+ VG FK+S G+ A LP+Q+ +E+K Sbjct: 327 NVAIRTSLIVGFPGETEEQFQELIQFVQDYPLENVGIFKFSREPGSHAYDLPNQISDEMK 386 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLN 413 E+R++R MQ+Q+++ + L++ +G++I V+++ E IGR P+IDG V +N Sbjct: 387 EDRYHRLMQVQKKVVKKNLKKMIGKKIAVVVEGYHPETELLMIGRHTGQCPDIDGQVLIN 446 Query: 414 GETNVKP-GDILRVKVEHADEYDLWG 438 VK G+I V++ +YDL G Sbjct: 447 DGRKVKAFGEIYTVEITDVADYDLVG 472 >UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA07_9FIRM Length = 448 Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 174/449 (38%), Positives = 263/449 (58%), Gaps = 29/449 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ ++LGCPKN VDSE I+ L +GY++V +D +I+NTC FI A++ES+ +I Sbjct: 7 KVFVLTLGCPKNTVDSENIMYLLSKQGYEIVDDATVSDYIIINTCTFIHDAMEESINSIL 66 Query: 69 EAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGP---HSYEQVLEHVH----H 115 EA K+IVTGCL + + ++E P+V G ++ +++++ + Sbjct: 67 EATLVKKDRSEVKIIVTGCLAQRYSKDLKEEIPEVDAFVGTGEFYNMDKIIKSMETEESD 126 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 V N + TP H+AYLK+SEGC+ CT+C+IPS+RG SR I +++ Sbjct: 127 EVIVKVDNIDCPIFETDRTLTTPSHFAYLKVSEGCDKHCTYCVIPSIRGKQRSRKIEDIV 186 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 SEAKRL D GVKE+++I+QD YG D+ GE + L E+L+K+ W Sbjct: 187 SEAKRLADRGVKELILIAQDVGEYGTDLY-------GE---RKLPELLEELNKIESIHWI 236 Query: 234 RLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R+ Y+YP D++I + K+L Y+D+PLQH + ILK M R S + L I++ R Sbjct: 237 RVLYIYPETVSDELIDKFVNLDKVLKYIDMPLQHINDNILKKMGRKTSKEDILTLIRKLR 296 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + +RSTFI FPGETEE+ + LL+F+K +LDRVG FKYS EG A + +QV Sbjct: 297 SKVNGIKIRSTFITAFPGETEENHKELLEFIKLYQLDRVGFFKYSREEGTPAYDMDNQVS 356 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGA-IGRSMADAPEIDGA 409 EE+K+ER+ M Q+ +S E ++ + + + V+I+E DE+ IGRS D PEIDG Sbjct: 357 EEIKDERYMELMSAQEDVSEELMESYLDKTLEVLIEEKVEDEDNVYIGRSYMDCPEIDGE 416 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 VY+ + ++ G+ + +E + EYDL G Sbjct: 417 VYVYADKPLEIGNFYDIVIEDSMEYDLIG 445 >UniRef50_C9M5C2 RNA modification enzyme, MiaB-family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C2_9BACT Length = 431 Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 165/439 (37%), Positives = 252/439 (57%), Gaps = 36/439 (8%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI--GEA 70 V+LGCPKN DSER+ + G+ + + D++++NTCGFI AV+E + + E Sbjct: 7 VTLGCPKNEADSERLAGIMARAGFSLTDKSEGVDLILLNTCGFIQPAVEEGISTMLDMET 66 Query: 71 LNENGKV---IVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV-HHYVPKPKHNPF 125 + G V V GC+ + D +++ P V +++++E + Y+ +H Sbjct: 67 MKARGDVKALAVVGCMVNRYGDDLKKEFPTVDYWARSEQWQELIESMGATYLGDGRH--I 124 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 L+ P YLKISEGCN +C++C IP +RG L SRPI E++ EA RLV G Sbjct: 125 LTRTP---------WTRYLKISEGCNCQCSYCAIPGIRGRLCSRPIDELVQEAGRLVSEG 175 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL---GIWTRLHYVYPYP 242 KE+ ++ Q+ + YG D+ K S+ L +L K +W RL Y++P Sbjct: 176 AKELCLVGQELTEYGADLYK----------KRSLPKLLTELEKTLPQSVWLRLFYLHP-S 224 Query: 243 HVDDVI--PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 H+D + + + +I+P+LD+P+QH ++L+ M RP + + K REI P+ Sbjct: 225 HLDTALLEQIASSKQIVPWLDVPIQHIDNQVLERMARPPVETKIRSLFKIAREINPDFAF 284 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 R+T +VGFPGET F LLDF+++ + DR+G F YSP +G A + PDQ+PE+ K R+ Sbjct: 285 RTTLMVGFPGETRRQFDRLLDFVEDIQFDRLGAFTYSPEDGTKAASFPDQIPEDEKGRRY 344 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAVYLNGETNVK 419 + M LQQ IS R VGR + V+++EVD++G GRS DAPEIDGAV L+G + + Sbjct: 345 DELMSLQQSISRRRQALFVGRRLDVLVEEVDQDGTRWGRSYRDAPEIDGAVALSGSAS-Q 403 Query: 420 PGDILRVKVEHADEYDLWG 438 PGDI+ ++ + EYDL+G Sbjct: 404 PGDIVSALIDDSSEYDLFG 422 >UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RIMO_CARHZ Length = 438 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 171/449 (38%), Positives = 270/449 (60%), Gaps = 30/449 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K +SLGC KN DSE I+ L ++GY + +++D++IVNTCGFI +A++ES+E I Sbjct: 2 KYFILSLGCTKNQADSEVIMGILESKGYVRSLNPEESDLLIVNTCGFIAAAIEESIEEIL 61 Query: 69 EA--LNENG-KVIVTGCLGAKEDQIREVH-PKVLEITGP---HSYEQVLEHVHHYVPKPK 121 L + G K++V GCL +E + H P+V P ++ +++L + Sbjct: 62 NLVHLKKPGQKILVAGCLVQREGKELAKHLPEVDLFFTPREINNLDKLLADLGENNKLVL 121 Query: 122 HNP-FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P FL+L + K + Y Y+KI++GC++RCT+C IP++RG SRP+ ++L E K Sbjct: 122 SEPGFLNLEKKPRAK-SNEVYRYIKIADGCDNRCTYCTIPAIRGKYTSRPLDDILEEIKD 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG-----IWTRL 235 + G+KEI++++QDT+AYG+D+ GE L E L K+G W RL Sbjct: 181 TLKQGIKEIILVAQDTTAYGIDL-------YGE------FKLVELLRKIGSIKGNFWVRL 227 Query: 236 HYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+YP ++I + E K++ Y+D+PLQH P ILK M R GS + ++ +++ R+ Sbjct: 228 MYLYPDKITPELINEIKENPKVIKYVDVPLQHIHPEILKKMGRKGSSEEIISTLERLRKE 287 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++T+R+TFIVGFPGETEE F LLDF+K+ + +R+G F Y +G A + Q+P++ Sbjct: 288 IPDITIRTTFIVGFPGETEEQFNYLLDFVKKFKFNRLGAFPYYREKGTPAAKMKGQIPKK 347 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAPEIDGAVYL 412 VKE+R+ + M++QQ+IS + VG++I VI+++ E +GR+ DAPEIDG + + Sbjct: 348 VKEQRYEKLMEVQQEISLNLNKALVGKKIPVIVEKKIRGENLYLGRTYMDAPEIDGIIEI 407 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 E +K G I+ V + D YDL G + Sbjct: 408 KAEKRLKKGQIINVLITDYDIYDLKGEFI 436 >UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO n=56 Tax=cellular organisms RepID=RIMO_SYNR3 Length = 487 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 174/451 (38%), Positives = 259/451 (57%), Gaps = 28/451 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 +P + F LGC KN VD+E +L L GY V DA +V+VNTC FI A ES+ Sbjct: 37 RPTVAFAHLGCEKNRVDTEHMLGLLAQAGYGVSADEADAQVVVVNTCSFIQDARAESVRT 96 Query: 67 IGEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYE---QVLEHVHHYVPKPKH 122 + + + ++++ GCL ++++ E P+ I G Y+ +VLE V + Sbjct: 97 LVDLAEQGKQIVIAGCLAQHFQEELLESLPEARAIVGTGDYQHIVEVLEQVEAGERVNRV 156 Query: 123 NPFLSLVPEQGV---KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + + V ++ + + T AYLK++EGC++RC FCIIP +RGD SRPI +++EA+ Sbjct: 157 SQVPTFVADENLPRYRTTSEAVAYLKVAEGCDYRCAFCIIPKLRGDQRSRPIESIVAEAQ 216 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYV 238 +L GVKE+++ISQ T+ YG+D+ G+P + L L ++ I W R+HY Sbjct: 217 QLAAQGVKELILISQITTNYGLDLY-------GKP---QLAELLRALGEVEIPWIRVHYA 266 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPG--SVDRQLARIKQWREIC 295 YP +V+ E +LPYLD+PLQH+ P +L+ M RP V+ QL +++ RE Sbjct: 267 YPTGLTPEVLAAYREVPNVLPYLDLPLQHSHPEVLRAMNRPWQEGVNGQL--LQRIREQL 324 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P+ LR+TFIVG+PGETEE F+ LL+F++E R D VG F +SP +G A LP+ VP EV Sbjct: 325 PDAVLRTTFIVGYPGETEEQFEHLLEFVQEQRFDHVGVFCFSPEDGTPAADLPNAVPAEV 384 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYLN 413 E R R M+ QQ ISAER VGR + V++++ + IGR + AP++DG V + Sbjct: 385 AEARRGRLMEAQQAISAERNGAWVGRIVDVLVEQENPSSGELIGRCLRFAPDVDGEVRIR 444 Query: 414 ---GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ V++ AD YDL G V Sbjct: 445 AGSHGAAASAGTMVPVRITAADIYDLEGEVV 475 >UniRef50_A6NW35 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW35_9BACE Length = 449 Score = 287 bits (734), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 173/446 (38%), Positives = 262/446 (58%), Gaps = 24/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 Q KI FVSLGC KNLV++E+++ R G+ VV + + AD+ ++NTCGFIDSA E+++ Sbjct: 9 QYKIAFVSLGCAKNLVNTEQMMALCRDAGHQVVANPEGADVAVLNTCGFIDSAKSEAIDN 68 Query: 67 IGE-----ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I E + GK++VTGCL + +D++ E P+V + G SY ++ V + Sbjct: 69 ILELAELKSKGTLGKLLVTGCLSQRYKDELMEEMPEVDGVLGTGSYTDIVPAVESVMEGD 128 Query: 121 KHNPF--LSLVPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + F + E G ++ TP + AYLKI+EGC++RC++CIIP +RG SR + +L+ Sbjct: 129 QPTFFGDIDHTVEDGARMVSTPAYTAYLKIAEGCDNRCSYCIIPYLRGRYRSRTMESLLA 188 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRL 235 EAK L D GVKEI+VI+QD + YG D+ K + L ++L KL W RL Sbjct: 189 EAKELADRGVKEIIVIAQDITRYGTDLYK----------KRMLGELLKELCKLPFHWVRL 238 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY+YP DD+I ++A E KIL Y+DIPLQH + ++L+ M R G+ LA + + R Sbjct: 239 HYLYPDELDDDLIDVIASEPKILKYIDIPLQHINDKLLRSMNRRGTKAEILALLDKLRAR 298 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P L LR++ I G PGE EE+F+ L DFL+EA ++R G F++SP EG A +PDQV + Sbjct: 299 IPGLVLRTSLIAGLPGEGEEEFEELCDFLREAHIERAGIFQFSPEEGTPAAVMPDQVDPD 358 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPEIDGAVYL 412 R + LQ ++ + ++G + V+ + D + GRS AD+P++DG V+ Sbjct: 359 TAARRVELLVDLQSRVMDAFNESRLGETLEVLCEGFDPDMGCYAGRSYADSPDVDGKVFF 418 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 V G + V++ ++ DL G Sbjct: 419 TAAGLVPAGTFVNVRITGTEDGDLMG 444 >UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Bacteria RepID=RIMO_HELMI Length = 460 Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 184/450 (40%), Positives = 250/450 (55%), Gaps = 30/450 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI SLGC KN VD+E ++ LR GY++ +DA +++VNTCGFI A +ES++ I Sbjct: 19 KIHITSLGCAKNRVDTEVMMGLLREAGYELTQREEDAHVLLVNTCGFILPAKEESIQTIL 78 Query: 69 E--ALNENGK---VIVTGCL--GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY----- 116 E E G+ ++V GCL G + E+ P+V GP +V V Sbjct: 79 ELARYKETGRCRALLVAGCLPQGYAGELAAEL-PEVDAFFGPGDVPRVTSIVAEVLRGKR 137 Query: 117 ---VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 V KP FL V TP HYAY+KI++GC++RC +C IP++RG SR Sbjct: 138 SLEVGKPD---FLYDHTMPRVLSTPFHYAYVKIADGCDNRCGYCAIPNLRGRFRSRSEES 194 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 ++ E + LVD G++E L+I+QDT+ YGVD GE ++ + L W Sbjct: 195 IVEETRSLVDRGIQEALLIAQDTTCYGVD-------RYGEFRLAQLIGKLASIDGLR-WI 246 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL Y YP ++I MA E K+ Y+D+PLQHA +L+ M R VD I+ R Sbjct: 247 RLMYCYPSHFTPELIEAMAAEPKVCRYVDLPLQHADDELLRSMNRHAGVDEIRRLIRTLR 306 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E P L +R++FIVG PGETEE FQ LLDFL E R DRVG F YS E A L DQVP Sbjct: 307 ERLPGLAIRTSFIVGLPGETEEKFQRLLDFLAEMRFDRVGIFTYSREENTPAGKLADQVP 366 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVY 411 EEVKEER++R M LQQ+IS QE +G+ + V+++E G GRS +APE+DG + Sbjct: 367 EEVKEERYHRAMVLQQEISLSIQQEWIGKTLEVLVEEEVAPGLYRGRSEREAPEVDGHIE 426 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G + G+ V++ A YDL G + Sbjct: 427 FKGRHRM-IGEWANVRITAASHYDLMGEAI 455 >UniRef50_C4Z0L1 2-alkenal reductase n=16 Tax=Bacteria RepID=C4Z0L1_EUBE2 Length = 450 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 163/454 (35%), Positives = 255/454 (56%), Gaps = 26/454 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M +V KI F SLGC KNLVD+E +L L +G++ AD+++VNTC FI A Sbjct: 1 MQEVMQYMKIMFASLGCDKNLVDTENMLGILNDKGFEFTDDETQADVIVVNTCCFIGDAK 60 Query: 61 QESLEAIGEALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH 114 QES+ I E +IVTGCL + +D+I + P+V G SY+++ E V Sbjct: 61 QESINTILEMAQHKEDAVCKALIVTGCLAHRYKDEIIKEIPEVDAFLGTTSYDKIAEVVT 120 Query: 115 HYVPKPKHNPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + N L +V E+ + TP ++ YLKI+EGC+ CT+CIIP +RG+ S Sbjct: 121 SVLEGKGFNVVDDANRLPIVKEKRIITTPGYFEYLKIAEGCDKHCTYCIIPKVRGNFRSY 180 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ ++ +AK LV G KE+++++Q+T+ YG D+ K S+ L +L+K+ Sbjct: 181 PVEYLVEQAKHLVHNGAKELILVAQETTLYGTDLYG----------KKSLPMLIHELAKI 230 Query: 230 G--IWTRLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W R+ Y YP D++I + E K+ YLD+P+QHAS +LK M R L Sbjct: 231 EDLKWIRIQYCYPEEINDELIEAIKNEPKVCHYLDMPIQHASDNVLKRMGRKTDKQELLD 290 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R+ P++ LR+T I GFPGET+ D + +++F+ E DR+G F YS E A Sbjct: 291 IVAKLRKEIPDIALRTTLIAGFPGETQADHEEVMEFIDEIEFDRLGVFTYSREEDTPAAT 350 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE--VDEEGAIGRSMADAP 404 +PDQ+ +++ + + M LQQ+IS ++ + VG+ I V+++ ++ +GRS DAP Sbjct: 351 MPDQIDQDIMDTWRDELMALQQEISIDKSAQMVGKTIDVMVEGYIAEDNTYVGRSYKDAP 410 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 +DG V+ + + GD + VK+ + EYDL G Sbjct: 411 NVDGMVFFECDRELMSGDFVSVKITSSTEYDLMG 444 >UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Desulfuromonadales RepID=RIMO_PELPD Length = 450 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 180/456 (39%), Positives = 265/456 (58%), Gaps = 37/456 (8%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T + K+ VSLGC KNLVD+E +L L + Y++ +AD++IVNTC FI A QES+ Sbjct: 4 TEKQKVSMVSLGCSKNLVDAEVMLGLLARQEYEITTDEREADIIIVNTCSFIKEAKQESI 63 Query: 65 EAI---GEALNENG--KVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHH-- 115 +AI E N+ +IV+GCL + E+ RE+ P+V G Y ++ E + Sbjct: 64 DAILDLAERKNDGRCHTLIVSGCLPQRYQEELAREL-PEVDIFIGTGDYPRIAEILAEKS 122 Query: 116 -------YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 Y+ P F +P + +P ++YLKI EGC++RC++CIIP +RG S Sbjct: 123 GTDEQLCYIGDPDF-VFDETLPR--LNSSPAWFSYLKIGEGCSNRCSYCIIPKLRGPYRS 179 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP+ +++EA++L GVKE+ +ISQD + YG D++ T++ +L +L + Sbjct: 180 RPLEALVAEAEQLASRGVKELNIISQDITRYGSDMED----------GTTLETLLRRLVQ 229 Query: 229 L-GI-WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + GI W RL Y YP D +I L+ E KI YLDIPLQH S +LKLM+R + + Sbjct: 230 IDGIQWIRLLYAYPDGISDALIALIRDEPKICKYLDIPLQHISDPVLKLMRRRSNEQQIR 289 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 + + R P L LR++ IVGFPGET EDF L+ F+++AR DR+G F YS EG A Sbjct: 290 ELLAKLRREIPTLALRTSLIVGFPGETMEDFTSLMQFVEQARFDRLGVFCYSREEGTPAA 349 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMAD 402 +PDQV E VK ER + M++Q ++S +R +E +G VI++ EE + GRS Sbjct: 350 TMPDQVSERVKRERHRKLMRIQARLSFKRNRELIGTTEQVIVEGYSEETELLLKGRSSRQ 409 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 AP+IDG VY+ T GDI+ +++ + +YDL G Sbjct: 410 APDIDGQVYITAGT-ADVGDIVALRITDSSDYDLIG 444 >UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Verrucomicrobia RepID=RIMO_OPITP Length = 471 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 175/458 (38%), Positives = 254/458 (55%), Gaps = 38/458 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ +SLGC KNLVDSE ++ L G V+P + AD+VIVNTC FIDS+ +ES+ I Sbjct: 3 KVSLISLGCAKNLVDSEIMVGHLHQAGMAVIPEAEKADVVIVNTCSFIDSSKEESIGHIL 62 Query: 69 EALNENG--------KVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 E G K+IV GC+ + +D +H +V G +V + Sbjct: 63 EVHQHRGLRKRRKEQKLIVAGCMSQRFSKDLSSSLHDEVDAFIGLDQVTKVAPIIQEIYA 122 Query: 119 KPK------------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + + + F+ +LTP+H+AY+KI+EGCNH CTFCIIP +RG Sbjct: 123 RERTKTDDPVSFVEGRSTFIPDYDTPRFRLTPKHFAYVKIAEGCNHPCTFCIIPQIRGRH 182 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDV-----KHRTGFHNGEPVKTSMVS 221 SR + V++E ++LV GVKEI +ISQDT+ +G+D RT +G T++ + Sbjct: 183 RSRTVESVVAEVRQLVREGVKEINLISQDTTFFGMDTWEQRPNPRTPVDSGR--GTALTT 240 Query: 222 LCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRP 278 L QL+ + W RL Y +P D++I +AE K+ Y+DIPLQH S +L M+R Sbjct: 241 LLRQLNAIEGDFWIRLLYTHPAHWSDELIRTIAECPKVARYIDIPLQHISDAMLSRMQRE 300 Query: 279 GSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSP 338 S I + R P + +R+TFIVGFPGET+ D L F+ E + +R+G F+YS Sbjct: 301 TSGGYIRDLIARIRAGIPGIAVRTTFIVGFPGETDADVDELCAFISETKFERLGVFRYSQ 360 Query: 339 VEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGR 398 +G A +P+Q+ + KE RW+R M LQ+QI+A+ + VGR + V++ EE + R Sbjct: 361 EDGTRAAKMPEQLSAKTKEARWHRTMALQKQIAADVSKTYVGRTLRVLV----EEPGVAR 416 Query: 399 SMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 ADAP+IDG VY+ E V G+ V V +YDL Sbjct: 417 GEADAPDIDGRVYVPRELPV--GEFADVTVTGYHDYDL 452 >UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD6_9DELT Length = 463 Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 179/468 (38%), Positives = 257/468 (54%), Gaps = 44/468 (9%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 I SLGCPKNLVDSE +L +L EG V +AD+++VNTCGFI SAV+E ++ I Sbjct: 4 IHLTSLGCPKNLVDSELMLGQLVEEGLRPVSEPGEADVLLVNTCGFIQSAVEEGIDTILG 63 Query: 70 ALNENG----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVH---------- 114 + + +V+V GCL + + E P+V G + + Sbjct: 64 LIEQKKSPAVRVVVCGCLVQRYGSGLVEELPEVDLFLGTEEVSSIAARLRALEEGRAAPE 123 Query: 115 --------------HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP 160 Y P FL TP H AYLKI+EGC +RC++C+IP Sbjct: 124 SGSVPAGAPAADSLRYRPVDDLQRFLPNATLPRRLTTPAHRAYLKITEGCGNRCSYCMIP 183 Query: 161 SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV 220 ++RG L SR ++L EA+ L AGVKE+ +++QD +AYG+D+ G + + Sbjct: 184 AIRGPLRSRRPADILHEARALAAAGVKELTLVAQDLTAYGLDLGP-----GGPRLPDLLA 238 Query: 221 SLCEQLSKLGI-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRP 278 L +L + W RL Y+YP D+++ L+A +ILPY D+P QH + +LK M RP Sbjct: 239 QLHRELPAAQVPWIRLLYLYPSRVNDELLELVAANPRILPYFDLPFQHVADPVLKAMNRP 298 Query: 279 --GSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKY 336 ++ R+L + + R + P +RSTF+VGFPGE EED + L FL++ RL+ VG F Y Sbjct: 299 YGEALVREL--VDRVRRLVPRAVIRSTFMVGFPGEREEDVEALAAFLRDCRLEHVGMFTY 356 Query: 337 SPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 EG+ A LP QVPEE+KE+R+ R M LQ +IS Q +VG+ V+++ V E + Sbjct: 357 CNEEGSAAATLPGQVPEELKEQRFQRLMALQAEISLAANQARVGQVEEVLVEGVSSETEL 416 Query: 397 ---GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 GR+ APEIDG VY+N E N + G+++RV + A YDL G V Sbjct: 417 LLEGRAWFQAPEIDGCVYIN-EGNCRAGELVRVLISEAHPYDLVGGIV 463 >UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Deltaproteobacteria RepID=RIMO_DESPS Length = 443 Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 172/452 (38%), Positives = 268/452 (59%), Gaps = 32/452 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K +SLGC KNLVDSE +L LR G+++ DAD+++VNTCGFI AV+E++E I Sbjct: 2 KFHLISLGCAKNLVDSEVVLGCLRDAGWEMTDE-QDADLLLVNTCGFIQPAVEEAVEEIL 60 Query: 69 EALNENG-----KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 ++ K++V GCL + ++Q+ E P+V G + E+V + + Sbjct: 61 ALVDIKADFPEKKIVVLGCLVQRYKEQLLESLPEVDLFVGTEGVANIAEYVGKLIAGEEQ 120 Query: 123 NPFL--------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + + VP Q + TP A++KI+EGC++RC++C+IPS+RG L SR + +V Sbjct: 121 DKVIMPTEFLMTAKVPRQ--QSTPFFRAWVKITEGCDNRCSYCMIPSIRGPLRSRSVADV 178 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + +V +GV+EI +I+QD +AYG D+ G+ V ++ W R Sbjct: 179 LEEVQAMVASGVQEISLIAQDLTAYGDDL--------GDDVNLLVLLKELLAKTSVPWIR 230 Query: 235 LHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRP-GSVDRQLARIKQWR 292 L Y+YP +D+++ LMA +I+ YLDIP+QH + R+L LM RP G D + + + R Sbjct: 231 LLYLYPSELLDELLQLMAANPRIVKYLDIPIQHVNDRVLHLMNRPYGRADLE-EFVDKAR 289 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P++ LR+TF+VGFPGETEE++ + +FL+ +LD VG F YS EGA + PDQV Sbjct: 290 AHMPDIALRTTFLVGFPGETEEEYAEIGEFLRVRKLDHVGVFPYSNEEGAPSEHFPDQVD 349 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGA 409 +E+KE R R ++LQQ++S E ++ VG V+++ V EE + GR+ A ++DG Sbjct: 350 DEIKESRCARLLELQQELSTEIQKKYVGTVQKVLVEGVSEETDLLLEGRTQYQAADVDGR 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 VY+N E V G+I+ + + + +YDL G V Sbjct: 410 VYIN-EGQVVAGEIVDILITDSQQYDLVGGVV 440 >UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y777_9FIRM Length = 460 Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 181/454 (39%), Positives = 260/454 (57%), Gaps = 50/454 (11%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI- 67 KIG VSLGC KNLVDSER++ LR G+++V +A+ +IVNTCGFI+ A +E++ I Sbjct: 22 KIGVVSLGCCKNLVDSERMMGLLRQSGHEIVSDVHEAEAIIVNTCGFIEPAKEEAINTIL 81 Query: 68 --GEALNENG-KVIVTGCLGAK-----EDQIREV--------HPKVLEITGPHSYEQVLE 111 E NEN K+IV GCL + E ++ EV +PK+ +I E+VL+ Sbjct: 82 EMAEYKNENCRKLIVAGCLAQRYKADLEAEMPEVDCFLTISDYPKMGQILTRVLGEKVLD 141 Query: 112 HVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K+ +S P AYLKI+EGC++RC++C IP +RG VS PI Sbjct: 142 GY------GKNTRLVSTKPWT---------AYLKIAEGCDNRCSYCAIPGIRGGYVSFPI 186 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-G 230 ++++EAK+L GVKE++VI+QDTS YG D+ R + L +L+ + G Sbjct: 187 EDLVAEAKQLASEGVKELVVIAQDTSRYGTDLYGRR----------RIWDLLTELNAIDG 236 Query: 231 I-WTRLHYVYPYPHVDD--VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 + W R+ Y+YP +DD V + K++PY DIP+QH S ++LKLM R GSV+ L Sbjct: 237 LHWIRVLYLYP-DEIDDEFVTGIKDLKKVIPYFDIPVQHGSDKMLKLMNRRGSVESILRT 295 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 +K RE LR+T IVGFP ETEEDFQML+DF+KE R DR+G F +S E A + Sbjct: 296 VKLIRENYDMPVLRTTMIVGFPQETEEDFQMLIDFIKEVRWDRLGAFTFSNEEDTPAYTM 355 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPE 405 Q+ +E+ +ER R M +Q QI+ E + +G+ + V+++ D GR + AP+ Sbjct: 356 DGQISQEIMDERLERLMTVQNQIAQENGEALIGKTLEVLVENQDGLTGYYHGRGIHSAPD 415 Query: 406 -IDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 IDG + + +PG VKV A +DL G Sbjct: 416 GIDGLIKFKSSHHYQPGTFAWVKVTKAKHHDLIG 449 >UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Acidobacteria RepID=RIMO_SOLUE Length = 465 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 172/455 (37%), Positives = 254/455 (55%), Gaps = 41/455 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+GF+SLGCPKNLVDSE ++ +L +G+++ D AD+++VNTC FID A +ES++ I Sbjct: 2 KVGFISLGCPKNLVDSEVMMGQLVAKGHELTSHPDQADVLVVNTCSFIDPAKKESVDTIL 61 Query: 69 E-----ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E + K+IV GCL + IR P+V + G + + +++ + +P P Sbjct: 62 EMAEYKKIGRAKKLIVAGCLVERYRGDIRTEMPEVDALIGTNELDSIVD-ICEGMP-PST 119 Query: 123 NP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 NP + L P V TPRH+AY+KI+EGC+H CTFC+IP RG SR V+SE Sbjct: 120 NPLEPYLYHDLTPR--VLATPRHFAYMKIAEGCDHPCTFCVIPQYRGAFRSRRFESVVSE 177 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG------- 230 A RL G++EI +I QDT+ YG D+ G +G L E L++L Sbjct: 178 ATRLFQQGIREINLIGQDTTCYGEDL----GLKDG---------LAELLARLAQIETPQE 224 Query: 231 IWTRLHYVYPYPHVDDVIPLMAEGKILP-YLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W R Y YP ++ +AE L Y+D+PLQHAS +LK MKR S D L I+ Sbjct: 225 KWIRFLYAYPNKVTQKLLDTLAEHAALAKYIDMPLQHASANVLKRMKRGASGDIFLKLIE 284 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + R P + +R++FIVGFPGET DF L F++ A+ D +G F YS + + + AL Sbjct: 285 RIRRTIPGVAIRTSFIVGFPGETAADFDELCAFVEAAKFDNLGVFTYSDEDTSASYALDG 344 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEI 406 +V + R R M +Q++I+ R + VG+E+ V++ V E + R APEI Sbjct: 345 KVDGRTIQNRKRRLMAIQRKIARARNRGLVGKEVPVLVSGVSGETDLLWEARMSTQAPEI 404 Query: 407 DGAVYLNGETNVKP--GDILRVKVEHADEYDLWGS 439 DG +N +P G+I R+++ A +YD+ G+ Sbjct: 405 DGVTLINDFEGSEPRAGEIRRLRITEAHDYDVVGT 439 >UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSA4_9FIRM Length = 437 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 166/450 (36%), Positives = 263/450 (58%), Gaps = 34/450 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + V+LGC KN VDS +++ L Y V AD++IVNTCGFID+A +ES++ I + Sbjct: 4 VKIVTLGCSKNEVDSSCMMSILDKNRYSVENDPQKADIIIVNTCGFIDAAKEESIDTILQ 63 Query: 70 --ALNENG---KVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK- 121 E G K+I++GCL + E+ ++E+ P+ I G + Q+ + + + K Sbjct: 64 MAKYKETGSCKKMILSGCLAQRYPEELLKEI-PEADGIIGTGNISQINDILDRSIDGEKV 122 Query: 122 ------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 ++P+L + ++ V +T Y+KISEGCN+ C++CIIP +RG SR I ++ Sbjct: 123 IKVDNINSPYLEGIKKEKVNITE----YVKISEGCNNNCSYCIIPKLRGKNRSRRIEDIY 178 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWT 233 E L G +EI++I+Q+T+ YG+D+ R S+ L +++SK+ W Sbjct: 179 EEVSYLAKNGAREIILIAQNTTDYGIDLYGRY----------SLSKLIKEISKINDIKWI 228 Query: 234 RLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R+ Y+YP D++I + K++ Y+DIPLQH S +LKLM R + I++ R Sbjct: 229 RVLYLYPDHFTDELINEFINNDKLVKYVDIPLQHYSDHVLKLMDRHTDKEHIKNLIEKLR 288 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 +I L +R+TFIVGFPGE+EEDF +L +F+ + D++G F YS E AN L +Q+ Sbjct: 289 KI-KGLVIRTTFIVGFPGESEEDFNILREFINTYKFDKLGVFTYSREESTKANNLNEQID 347 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVY 411 E+VKE R + MQ Q +IS L++K+G+ + V+I+E E+ GRS D+P+IDG +Y Sbjct: 348 EDVKEYRRDIIMQDQLKISERLLEDKIGQVLQVLIEEKIEDNLFAGRSYIDSPDIDGVIY 407 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 +N + N+ + VKV + EYDL G + Sbjct: 408 VNSDKNLTINSFINVKVTSSMEYDLIGDAI 437 >UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DI62_9BACT Length = 469 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 172/473 (36%), Positives = 260/473 (54%), Gaps = 50/473 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI SLGC KNLVD+E +L + G + +DAD+ +VNTC FI+ A QES AI Sbjct: 6 KICVSSLGCAKNLVDTEVMLGSMAKSGVVITGDLNDADIFVVNTCSFIEGARQESNAAIM 65 Query: 69 EALN-----ENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK-PK 121 +A+ ++ KV+V GCL + ++ ++ HP V G + V++ + K P Sbjct: 66 DAITWKKKRKSRKVVVAGCLPQRSPEETKKNHPDVDLFLGLDDVASIGTMVNNLLRKMPT 125 Query: 122 HNPF------LSLVPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 N + L E +L TP HYAY+KISEGCNH+C+FC IP+ RG L SR I Sbjct: 126 MNTIQKDDLPVYLYDENTPRLLVTPSHYAYIKISEGCNHKCSFCAIPTFRGKLRSRTIES 185 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 ++ EA+ L++ GV+EI+++SQD++ YG D+K +S L + L KL Sbjct: 186 IVKEAQALLNRGVREIILVSQDSTGYGSDLKD----------GSSTAELLKALDKLDCDE 235 Query: 232 -WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RL Y+YP D++I A+ K I Y+D+PLQH + ++LK M+R + R + Sbjct: 236 YWVRLLYLYPTTVTDELIETFAQSKHIAKYIDMPLQHGADKVLKTMRRGITRKRTEILLD 295 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 ++R+ P + +R+T +VG PGE EE+FQ LDF+KE + DR+G F YS E A +L D Sbjct: 296 KFRKAMPGVVMRTTLLVGHPGEGEEEFQECLDFVKEQQFDRLGVFTYSHEENTHARSLED 355 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE------------------VD 391 E R ++ M +QQ+IS E+ Q G+++ VI+DE ++ Sbjct: 356 FTDPETSAARRDQIMAVQQEISYEKNQRFAGQDLRVIVDEAFLKTDIDPNDERFDEAIME 415 Query: 392 EEG---AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 E G + R+ DAP++D V+ + + + L V +E A +YDL+G V Sbjct: 416 EAGDYYVLSRTEGDAPDVDNLVHFSADEAILDQQFLTVHIEEATDYDLYGQLV 468 >UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Bacteria RepID=RIMO_DESAP Length = 450 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 182/448 (40%), Positives = 254/448 (56%), Gaps = 37/448 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 +I VSLGC KN VD E +L L GY + + AD+++VNTC FI A QES+EAI Sbjct: 11 RIALVSLGCDKNRVDGEVMLGLLERAGYQITAELE-ADIILVNTCAFIQDAKQESIEAIL 69 Query: 69 EALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E G ++ TGCL + D++ P++ + G +V++ V + Sbjct: 70 ETARYRGNGRCRVLLATGCLAQRYPDELLRDIPELDGVVGTGEVGRVVDIVRRAATGERV 129 Query: 123 NP-----FLSLVPEQGVKLTPR------HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 FL G ++ PR AYLKISEGC++RC +C+IP +RG SR Sbjct: 130 REVGPPGFL------GREVLPRVPSGSPFTAYLKISEGCDNRCLYCVIPQLRGPYRSREA 183 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 ++ EA+ L G +EI++++QDT+ YG D+K RT T +VS L + Sbjct: 184 SVLVREARALAARGAREIVLVAQDTTRYGSDLKERTSL-------TDLVSRLAALEGVA- 235 Query: 232 WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPG-SVD-RQLARI 288 W RL Y YP +++ LMA E ++ YLDIPLQHAS R+L+ M R S D R+L I Sbjct: 236 WIRLLYCYPSGITFELVELMAREPRLCRYLDIPLQHASDRVLRRMGRSTMSYDLRKL--I 293 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 R P LT+RSTF+VGFPGETE DF+ LL FLK +LDR G F YS EG A +P Sbjct: 294 LFLRSAIPGLTIRSTFMVGFPGETEADFEELLGFLKAMKLDRAGFFAYSREEGTPAARMP 353 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG 408 DQVP EVK ER R +Q+++S + +VG E+ V+++ E GRS ADAP+IDG Sbjct: 354 DQVPPEVKRERLERAAAVQREVSRALNRARVGSEVTVLVEGRKGEQYYGRSEADAPDIDG 413 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDL 436 V+L+ ++++PG +R ++ A YDL Sbjct: 414 RVFLSAASDLEPGTFVRARITGAGPYDL 441 >UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGL8_DESAA Length = 451 Score = 278 bits (711), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 164/453 (36%), Positives = 261/453 (57%), Gaps = 29/453 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 S Q + VSLGC +NLVDSE IL L + G+ + +A+ +I+N+CGF+ +AV Sbjct: 3 SNTDNQEIVHLVSLGCVRNLVDSELILGALASGGFALTEDPAEAETIIINSCGFVRAAVD 62 Query: 62 ESLEAIGEALN--ENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHH 115 E+++ + E + E G+ +++ GC+ + ++ E P++ + GP +++ ++E + Sbjct: 63 ETIDVVLEMAHYKEEGRCQRLVLCGCMAQRYGKELEEALPELDMVVGPGAHKDIVELLRR 122 Query: 116 ------YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 VP P P L + TP H AY+KISEGC RCTFC+IP +RG SR Sbjct: 123 PTGFICQVPDPSTAP-LQQASFPRICSTP-HMAYIKISEGCPDRCTFCMIPQLRGAWRSR 180 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ +++ EA L+ G KEI++++QDT+AYG+D + +TS+ L L +L Sbjct: 181 PLDDIVEEAGNLIQWGAKEIILVAQDTTAYGLDFDKQN--------RTSLDQLLSSLCRL 232 Query: 230 GIWTRLHYVYPYPH-VDDVI--PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 TR ++Y +P+ V D + ++ ++ Y D+P+QH S RILK+M R + D L Sbjct: 233 EGETRFRFLYGHPNRVTDALLETAASQPRVCSYFDLPVQHGSDRILKMMGRKNTRDEMLR 292 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 ++ R P++ LR+T +VGFPGETEEDF L++F++EAR D +G F YS E ++ Sbjct: 293 LFEKIRATVPDVALRTTALVGFPGETEEDFNQLVEFVQEARFDHLGVFAYSDAEEIPSHR 352 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGR--EILVIIDEVDEEGAI-GRSMADA 403 LPD VPE+ +R + M Q IS + ++VG+ LV+ + D E G++ A Sbjct: 353 LPDHVPEDTAIKRRDYIMDRQNTISLDNNADRVGKTYTALVLGESGDPEYPYWGKTCLQA 412 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 P++DG ++ GE ++ PG + RV V AD YDL Sbjct: 413 PDVDGVTFIQGE-DLGPGRLARVTVHGADVYDL 444 >UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6H1_ACIC5 Length = 512 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 179/487 (36%), Positives = 261/487 (53%), Gaps = 65/487 (13%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + +P+IGFVSLGCPKNLVDSE ++ L G + AD+++VNTC FID+A QES+ Sbjct: 16 SARPRIGFVSLGCPKNLVDSEVMMGLLDRAGGVMTQDAASADILVVNTCSFIDAAKQESV 75 Query: 65 EAIGEALNENG-----KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I E K+IV GCL + D+I++ P+V + G E+VLE +P Sbjct: 76 DTILEMAQHKTTGRAQKLIVAGCLVERYRDEIQKNIPEVDAVVGTGELEKVLEAAGLALP 135 Query: 119 ---KPKHNPFLSLVP------------EQG-------------------------VKLTP 138 +PF L +QG ++ T Sbjct: 136 PAPAASDSPFTILSAGVAARPEGELREQQGRFDREQWDGATAALPQYLYDHTTPRLRATR 195 Query: 139 RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSA 198 AY+KI+EGC+H C+FC+IP++RG SR V++EA+ LV GV+EI +I QDT+ Sbjct: 196 SASAYIKIAEGCDHPCSFCVIPNLRGKFRSRRFESVVAEAQSLVAQGVREITLIGQDTTC 255 Query: 199 YGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHYVYPYPHVDDVIPLMAE-GK 255 YG D+ G +G + L E+L+++ +W R Y YP ++ +A+ Sbjct: 256 YGEDL----GLKDG------LALLLERLAQIEGLLWLRFLYAYPNKITGKLLDTIAKHDN 305 Query: 256 ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEED 315 I YLD+PLQHAS +LK MKR + + L I++ R P L LR++FIVGFPGET ED Sbjct: 306 ICKYLDVPLQHASGAVLKSMKRGANAEILLKTIEKARARVPGLVLRTSFIVGFPGETAED 365 Query: 316 FQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERL 375 F L F+++A++D +G F YS EG+ A L ++P E+R M+ QQ IS Sbjct: 366 FATLQQFVRDAQIDWLGVFTYSDEEGSKAFDLEGKLPRRTIEQRKRALMKQQQGISRRAK 425 Query: 376 QEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLNG---ETNVKPGDILRVKVE 429 Q+ VGR + V+++ EE + GR+ APEIDG VYLN ++ PG R ++ Sbjct: 426 QQWVGRVVDVLVEGESEETPLLWQGRTAWHAPEIDGVVYLNDFGPFESLTPGRFYRCEIT 485 Query: 430 HADEYDL 436 A +YD+ Sbjct: 486 EAHDYDV 492 >UniRef50_B0P6Q6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6Q6_9FIRM Length = 441 Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 163/444 (36%), Positives = 250/444 (56%), Gaps = 25/444 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G VSLGC KN VD+ER+L ++ GY++ D+VI+NTCGFI+ A +ES+E I Sbjct: 4 KVGMVSLGCSKNQVDAERLLAQIEKGGYEICTDASQCDVVIINTCGFIEDAKRESIETIL 63 Query: 69 E--ALNENGKV---IVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E L G + +VTGCL + +Q+ P+ + G +L + + K Sbjct: 64 EFAQLKTGGALRALVVTGCLAERYREQVAAEIPEADVVLGIGCNADILGAIERALHGEKT 123 Query: 123 NPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 F LSL E+ + P ++AYLK++EGC++RC++C IP +RG SRP+ +++E Sbjct: 124 VAFGEKEALSLEGERVLANEP-YFAYLKVAEGCDNRCSYCAIPLIRGPFRSRPMENIVAE 182 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRL 235 A+RL GV E+ V++QDT+ YG D+ R ++ L E+L +L G+ W R+ Sbjct: 183 AQRLAACGVTELNVVAQDTTRYGEDLYGRL----------ALPELLEKLCRLDGVRWVRM 232 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP D ++ +MA E KI+ Y+DIP+QH + RIL LM R G A +++ R Sbjct: 233 LYCYPDRITDRLLDVMAREEKIVKYMDIPIQHVNGRILSLMNRRGDAGSLTALMEKIRAR 292 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + LR+T I GFP ET+ +F+ L +F++ R +R+GCF YS E A + Q+ EE Sbjct: 293 VPGVVLRTTLITGFPTETQGEFEELCEFVQRVRFERLGCFAYSAEEDTPAALMDGQLDEE 352 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K R M+ Q + + ++GR + V ++ + GRS DAP+ID VY +G Sbjct: 353 EKRRRAQIIMEQQYGVMEGFNRSQIGRRLTVAVEGREGRLWYGRSYMDAPDIDSRVYFSG 412 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 PGD + V+++ + YDL G Sbjct: 413 HGPYSPGDYIEVEIDGVEGYDLKG 436 >UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=RIMO_ALKOO Length = 438 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 164/444 (36%), Positives = 263/444 (59%), Gaps = 30/444 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 +GF+SLGC KNLV +E I+ ++ +++V +DA+++++NTCGFI+SA QE++ I E Sbjct: 3 VGFISLGCSKNLVVTEEIIGLFKSNHFNIVNKKEDAEIIVINTCGFIESAKQEAINTILE 62 Query: 70 -ALNENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 A +N K +IV GCL + + ++ + P+V Y+Q+ + + + + Sbjct: 63 MAKLKNNKCKYLIVAGCLVQRYKKELEKAIPEVDLFISISEYKQIWKEIENLLDLETGKE 122 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 +L V T + AYLKI EGC++ CT+C IP+++G +SR + ++L EA+ L Sbjct: 123 S-NLDYHNRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYISRTMEDILKEARNLAKQ 181 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYP 242 G+KE++VI+QDT+ YG+D+ GE + L E+L K+ W R YVYP Sbjct: 182 GIKELIVIAQDTTKYGLDIY-------GEA---RLPQLLEELCKIEDIEWVRFLYVYPES 231 Query: 243 HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRP---GSVDRQLARIKQWREICPEL 298 D++I ++ E KI Y DIP+QH S +LK M R SV + +I+ REI P++ Sbjct: 232 ITDELIKVVGENDKICNYFDIPIQHISDSVLKRMNRKSDGASVRNIIEKIR--REI-PDV 288 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 +R+T IVGFPGETEEDF+ L +F++E + D++G F YS + A L +Q+ K+ Sbjct: 289 IIRTTLIVGFPGETEEDFKELYEFVEETKFDKLGVFAYSKEDNTPAAKLKEQIHHATKKS 348 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYL--NG 414 R + M LQ++IS E L++KVG V+I+ + G IGR+ D P++DG VY+ N Sbjct: 349 RLRKIMALQEKISRESLEQKVGNVYKVLIESRTKGGNYYIGRTYMDVPDMDGVVYIVNNT 408 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 + N+ + +++ A +YDL+G Sbjct: 409 KENL-MNTFVDCRIQRAKDYDLFG 431 >UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XWL0_9BACT Length = 450 Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 159/445 (35%), Positives = 254/445 (57%), Gaps = 31/445 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYD--DADMVIVNTCGFIDSAVQESL 64 + +I +++GC KNLVDSE ++ + G++ + + ++ ++NTCGFI++A +ES+ Sbjct: 21 KNQIDIITMGCSKNLVDSELLMKQFEANGFECTHDTEQPEGEIAVINTCGFIETAKEESI 80 Query: 65 EAIGEALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 I E +N K+ V GCL + +D++ + P+V + G +Y+Q+L + Sbjct: 81 NTILEFVNRKEKGQLNKLFVMGCLSQRYKDELEKEIPEVDKFYGKFNYKQLLTDLGK--- 137 Query: 119 KPKHNPFLSLVPEQGVK--LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + GV+ TPRHYAY+KI+EGC+ C +C IP + G SR + ++L Sbjct: 138 -------ADVTSCNGVRHLTTPRHYAYIKIAEGCDRHCAYCAIPLITGKHRSRKMEDILQ 190 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E ++LV GVKE VI Q+ + YGVD+ +G+ T ++S + + W RLH Sbjct: 191 EVEQLVAQGVKEFQVIEQELTYYGVDL-------DGKHHITELISRMADIKGVE-WIRLH 242 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++ ++A+ + YLDI QH S +L M R S + IK+ R Sbjct: 243 YAYPNQFPFDLLDVIAQKPNVCKYLDIAFQHISDHMLDRMHRHVSKQETINLIKEIRSRV 302 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA-DANALPDQVPEE 354 P + LR+T +VGFPGET+EDF+ L DF++E R +R+G F YS EG A D VPEE Sbjct: 303 PSIHLRTTLLVGFPGETDEDFEELKDFVREVRFERMGAFAYSREEGTYSAEHYEDDVPEE 362 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN- 413 VK++R + M +QQ+IS E + K+G+ VIID + + IGR+ +P++D V ++ Sbjct: 363 VKQQRLDELMAIQQEISTELEETKIGQTFKVIIDREEGDYYIGRTEFCSPDVDPEVLISI 422 Query: 414 GETNVKPGDILRVKVEHADEYDLWG 438 GE ++ G+ V + +DE+DL+G Sbjct: 423 GEVPLRVGEFYNVYITDSDEFDLYG 447 >UniRef50_B2KB59 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Elusimicrobium minutum Pei191 RepID=RIMO_ELUMP Length = 430 Score = 273 bits (699), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 162/442 (36%), Positives = 250/442 (56%), Gaps = 29/442 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI +SLGC KNL D+E +L L + + +V +AD +++NTC FI A +E+ I Sbjct: 3 KIFTISLGCSKNLTDTEEMLGILNHKKHYLVADESEADTILINTCAFIKPAREEADREIK 62 Query: 69 EA--LNENGKV---IVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 A L GK+ IV GCL KE + + +P V G +E + + + +PKH Sbjct: 63 RASKLKAQGKIEKLIVAGCLTQKEGKSLPSKYPLVDAFIGLKG----IEKIDNVIKRPKH 118 Query: 123 N----PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + P P+ ++LT H AYLK+++GCN+RC +C IP++RG S+ + ++++EA Sbjct: 119 SFCPAPDYIKAPDFKLQLTAPHSAYLKVADGCNNRCAYCTIPAIRGPFRSKSMEDIVAEA 178 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHY 237 K + GVKEI +I+QDT+AYG D+ G+P ++ ++ GI W R+ Y Sbjct: 179 KAMEKNGVKEISLIAQDTTAYGQDI-------FGKPSLVKLLKKLVKIK--GIEWFRIMY 229 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D++ +A E KI YLD+PLQH S +LK M R + D A+IK R+I P Sbjct: 230 AYPETVTKDLLDFIACEPKICRYLDMPLQHISAPVLKAMNRRSTEDEVRAKIKLIRQIVP 289 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++LR+ FI GFPGET EDF+ L F+ EA+ + VG F YS +G A + QV E++K Sbjct: 290 GMSLRTNFIAGFPGETAEDFEKLKKFIAEAKFNNVGVFAYSKEDGTPAAVMKRQVAEKIK 349 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 ++R + Q ++ ++ G+ + V++D + GRS +D+P+IDG V + G Sbjct: 350 KQRVEELVSAQSRVIDSINRKLKGKTVKVLLDNL----FCGRSESDSPDIDGRVEVKGNK 405 Query: 417 NVKPGDILRVKVEHADEYDLWG 438 K GD ++VK+ A Y+ G Sbjct: 406 KYKAGDFVKVKITSAKGYNRTG 427 >UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RIMO_NATTJ Length = 444 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 165/448 (36%), Positives = 257/448 (57%), Gaps = 30/448 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G +SLGC KN VD+E + L Y + Y DAD++IVNTCGFID A +ES++ I Sbjct: 2 KVGIISLGCAKNQVDTEVMQGILENSNYKMTDDYYDADIIIVNTCGFIDDAKEESVDHIL 61 Query: 69 EA--LNENGKV---IVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E L E GK+ IV GCL + ++ ++E P++ + G + +++ E + + K + Sbjct: 62 EVAQLKETGKLKVLIVAGCLSQRYQESLKEEIPEIDAMIGTDTQDKITEVISSAL-KGNY 120 Query: 123 NPF---LSLVPEQGVKLTPRH---YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 F L+ + EQ P AY+KI+EGC++ C++C IP +RG SR I ++ Sbjct: 121 ISFYDRLNKIDEQLFLRQPYQPGPSAYIKIAEGCHNYCSYCAIPLIRGGYRSRTIEDIKI 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTR 234 EA ++ G KE+ +I+QDT+ YG D+ K S+ +L ++L+ + W R Sbjct: 181 EANHFIEKGSKELTLIAQDTTNYGSDIYG----------KFSLDTLLDELATIPGDFWIR 230 Query: 235 LHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP D +I ++ KI YLDIPLQH IL M R G+ ++ L I R+ Sbjct: 231 VLYAYPTRITDSLIEVINRHEKICSYLDIPLQHIDDDILTSMNRGGNKEQILNLIHNLRK 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++TLR++ IVGFPGET+E +Q L+ F++E D G FKYS E A D+V E Sbjct: 291 NIPDITLRTSLIVGFPGETDEKYQNLISFMQEIEFDHAGIFKYSDEEDTQAYNFKDKVSE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEIDGAV 410 +VKE+R+ ++Q++I+ ++ + VG E+ V+I+E E+ +GR+ APE+DGAV Sbjct: 351 DVKEQRYQEAWEVQKEITRKKNEGLVGTEMRVLIEEALEDEPTTKVGRTEGHAPEVDGAV 410 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 + + GD + V++ A +YDL G Sbjct: 411 II-PDCEASSGDFINVEIVQALDYDLIG 437 >UniRef50_D1U9N9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Desulfovibrio RepID=D1U9N9_9DELT Length = 443 Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 176/457 (38%), Positives = 253/457 (55%), Gaps = 46/457 (10%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVP--SYDDADMVIVNTCGFIDSAVQES 63 P K+ VSLGCPKNLVD+ER+L L G ++P + AD+ ++NTCGFI AV+ES Sbjct: 7 PAVKVFTVSLGCPKNLVDTERLLGAL---GPAMLPADTVAQADLALINTCGFIQPAVEES 63 Query: 64 LEAIGEALNENGK----------VIVTGCLGAKEDQ-IREVHPKV---LEITGPHSYE-Q 108 + AI +A+ + + V V GCL ++ Q +RE P+V L H + Sbjct: 64 VAAILDAVRDADETRESTGRRPLVAVAGCLVSRYGQDLREELPEVDLWLSTDQLHLWPVM 123 Query: 109 VLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + + H P P LS P YAYLKISEGC+H C FC IPS+RG S Sbjct: 124 IAQAITHARPIPNAPRRLSTGPA---------YAYLKISEGCSHNCHFCTIPSIRGPHRS 174 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP+ +L EA+ L A V EI+++ QD+++YG D+ G+ +VS L Sbjct: 175 RPVEALLDEARTLA-ASVPEIIIVGQDSTSYGSDL-------GGDNTIKHLVSGLADLPG 226 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 L W RL Y+YP DD++ + +LPY DIPLQHA P +L M RP + + + Sbjct: 227 LA-WLRLMYLYPAGLTDDLLGFLKSIGDPLLPYFDIPLQHAHPDVLASMGRPFARNPRKV 285 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 I + R + LR+TFIVG+PGET+E F L+ F++E R +G F Y P +G A A Sbjct: 286 -IDRVRAHFSDAALRTTFIVGYPGETDEHFDHLMRFVEETRFHHLGVFPYWPEDGTPAAA 344 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADA 403 LPD V ++ K +R + M LQ IS E ++ VG+ + V+I+ E GR+ A Sbjct: 345 LPDPVDDQTKLDRRDALMALQADISREIMESHVGQTLPVLIEAPSPEWPGLFTGRTWFQA 404 Query: 404 PEIDGAVYLNG--ETNVKPGDILRVKVEHADEYDLWG 438 PE+DG Y++ +T + PG I+ ++++ AD YDL G Sbjct: 405 PEVDGTTYVSTPPDTTLTPGTIVTIEIDKADTYDLSG 441 >UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWT7_9FIRM Length = 423 Score = 270 bits (690), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 171/443 (38%), Positives = 251/443 (56%), Gaps = 41/443 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTEL--RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ SLGC KN VD+E++L EL + G V +A++ IVNTC FI A +ES++ Sbjct: 2 KLYLESLGCDKNRVDAEKLLFELLQKYPGSSVTDEPSEAEIAIVNTCSFIGPAKEESIQC 61 Query: 67 IGE--ALNENGKV---IVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I + E GK+ IV GCL + +D+IR+ P++ EIT Y + L+H V Sbjct: 62 ILDLAQYKETGKLEKLIVAGCLVERYKDEIRKELPEIDEITSVKDYVKRLDHQMARV--- 118 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 E G K + YLKI+EGC+ C++CIIP +RG S P VL EA+ Sbjct: 119 ----------ESGEKYS----RYLKIAEGCDKYCSYCIIPRLRGHYRSIPKELVLEEARA 164 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHYV 238 LV G E+++++Q+T+ YG D+ K ++ L +LS++ W R+ Y Sbjct: 165 LVSEGAGELILVAQETTLYGTDLYK----------KKALAELLAELSEIPNLQWIRILYC 214 Query: 239 YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP ++I M K+ YLD+P+QHAS RILK M R + +I R+ P+ Sbjct: 215 YPEEIEPELIREMKRNPKVCHYLDLPIQHASDRILKRMNRRTRKEELKEKIALLRKEMPD 274 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + LR+T I GFPGETEEDFQ +LDF+ E R DR+G F YS EG A + DQ+PE++K Sbjct: 275 IALRTTIITGFPGETEEDFQEVLDFISEMRFDRLGAFPYSQEEGTKAAEMEDQIPEKLKN 334 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYLNGE 415 +R ++ M+LQQ I+ + +E++GR++ V++ DEE + RS DAP++D +Y+ GE Sbjct: 335 QRLSQIMELQQNIAFRKAEEQIGRKLKVLVCGYDEEEQRVLCRSYMDAPDVDSYLYVFGE 394 Query: 416 TNVKPGDILRVKVEHADEYDLWG 438 + G L KV + YDL G Sbjct: 395 KK-EVGSFLYAKVIDTEGYDLIG 416 >UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT8_9BACT Length = 416 Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 158/430 (36%), Positives = 240/430 (55%), Gaps = 28/430 (6%) Query: 22 VDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--EALNENG---K 76 +DSE + E + +V ++ D+ IVNTCGFI AV+ES++ I E + G K Sbjct: 1 MDSEVLAGRFEPENWTLVDRVEECDIAIVNTCGFIQPAVEESIDVILDLEEMKAQGTLEK 60 Query: 77 VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVK 135 + V GCL + + +++ P V ++ + + P+ + L+ P Sbjct: 61 ICVVGCLVNRYGEDLKKEFPSVDLWAEAEDWDSLSRALGIDSPR-RGRRILTESP----- 114 Query: 136 LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQD 195 YLK+ EGC+ RC+FC IPS+RG L SR ++++EA +L + G KE+ ++ QD Sbjct: 115 ----WTRYLKVGEGCDTRCSFCTIPSIRGPLRSREPKDIVAEAVKLAEEGAKELCLVGQD 170 Query: 196 TSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVI--PLMAE 253 + YG D+ R + ++ E IW RL Y++P VD+ ++ Sbjct: 171 LTVYGSDLSKRGSL-------SGLLDAMEAELPEDIWLRLFYLHP-SRVDEASLERVLNS 222 Query: 254 GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETE 313 +ILP+LDIP+QH +L+ M RP + K R + P+ R+T +VGFPGETE Sbjct: 223 SRILPWLDIPIQHVDADVLRRMNRPPVEEHIRKLFKAGRRMFPDFAFRTTIMVGFPGETE 282 Query: 314 EDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAE 373 + FQ LLDF+++ DR+G F + P EG A +PDQ+P++ K+ R+ M+LQQ IS Sbjct: 283 KAFQSLLDFVEDVAFDRLGAFTFCPEEGTPAALMPDQIPQDEKDRRYAELMELQQGISLA 342 Query: 374 RLQEKVGREILVIIDEVDEEGAI--GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHA 431 R + VG+E+ V+I+EVDEE GRS DAPEIDG V ++G + PGD++RV + A Sbjct: 343 RQRGFVGKEMDVLIEEVDEEDGTRWGRSFRDAPEIDGLVSISGAKDDVPGDMVRVSITDA 402 Query: 432 DEYDLWGSRV 441 EYDL+G RV Sbjct: 403 SEYDLFGERV 412 >UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S9_9BACT Length = 437 Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 157/447 (35%), Positives = 259/447 (57%), Gaps = 23/447 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M ++ + ++LGC KNLVD+E +L + G + +DA++++VNTCGFID + Sbjct: 1 MKMISKSKTVALINLGCTKNLVDAEEMLGRIAANGSTICQYPEDAEVLVVNTCGFIDDSK 60 Query: 61 QESLEAIGE--ALNENG---KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH 114 +ES++ I + L EN K+IVTGCL + +++ P++ ++ G +E++ H+ Sbjct: 61 KESIDMIFKMAKLKENAQCKKLIVTGCLAQRYSAELKSEIPEIDDVVGLKDFEKIT-HLT 119 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + ++LTP+HY+YL+IS+GC++RCT+C IP +RG+ +SR I + Sbjct: 120 GKRQMDNSTIYQGDDWRNRIRLTPKHYSYLRISDGCDNRCTYCAIPGIRGNFMSRSIENI 179 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-W 232 L E++++ GVKEI +ISQDT++YG+D+ + H L E+++ + GI W Sbjct: 180 LEESRQMASEGVKEINIISQDTTSYGLDIYGKQMLH----------VLLEKIAAIEGIQW 229 Query: 233 TRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 RL Y +P ++I + E + I Y+D+P+QH + IL M R + I Sbjct: 230 IRLLYTHPGHFYPELINTINEHETICKYIDLPIQHINDTILGKMGRNTTRKSIETLINNL 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R + LR++ IVGFPGET+E +Q LL+F+K+ + +R+G F YS E A QV Sbjct: 290 RRSIRSIVLRTSVIVGFPGETDEQYQELLEFIKKTKFERLGVFAYSKEENTPAAKFKKQV 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID--EVDEEGAIGRSMADAPEIDGA 409 ++VK+ER N M Q++I E + +G++ VI+D EV IGR+ DAPE+DG Sbjct: 350 GKKVKQERLNEIMLAQREIVWENNKNLIGKKASVIVDEKEVVSGMLIGRTSGDAPEVDGK 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDL 436 V++N + +K G+I + + + + YDL Sbjct: 410 VFIN-DKQIKVGEIRELVISNVNGYDL 435 >UniRef50_A4S5H4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S5H4_OSTLU Length = 450 Score = 268 bits (684), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 164/458 (35%), Positives = 263/458 (57%), Gaps = 47/458 (10%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA- 70 VSLGCPKN VD E +L +L G+DV ++ AD +++N+CGF++ A ES+EAI EA Sbjct: 1 MVSLGCPKNTVDGEVMLGDLHGAGFDVTDDHESADAIVINSCGFVEDAKNESVEAILEAS 60 Query: 71 --LNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 N + K+IVTGCL + + + P+ I G +Y + + V + + Sbjct: 61 QLANGSKKIIVTGCLAQRYANDLANELPEADVIVGFENYANLPKTVGGLLGVETNG---L 117 Query: 128 LVPEQG-----------------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + P+Q +++TPRH AYL+++EGC+H+CTFC IPS RG S+P Sbjct: 118 IAPQQARVQVGGASPPFREEIKRLRITPRHTAYLRVAEGCDHKCTFCAIPSFRGRFRSKP 177 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL- 229 ++ EAK L D+GV+E+ +I++DT+ +G+D++ G + L L+++ Sbjct: 178 WQSIIDEAKALADSGVRELNLIAEDTNQWGIDLRASDG--------RGLAELLYALAEVE 229 Query: 230 GI-WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 GI W R+ Y YP D++I +A+ ++ Y+DIPLQH + L M RP RQ Sbjct: 230 GIEWMRILYAYPSYFSDELIRAIADVPQVCKYIDIPLQHITNLSLLRMNRP---PRQHTE 286 Query: 288 --IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 + + R+ P+L LR+TFI GFPGETEE+ + L+ F ++ + +R+G F YS +G A Sbjct: 287 DLLYKLRDRIPDLALRTTFISGFPGETEEEHEELMQFCRDFKFERLGAFAYSEEDGTPAM 346 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADA 403 PDQVPEE++ R ++ + QQ+IS + +VG+++ V+ID DE + IGR+ +A Sbjct: 347 EYPDQVPEEIRAIRRDQLVSQQQEISEDFAMSRVGKDVDVLIDNWDEDMQAFIGRTTLEA 406 Query: 404 PEIDGAVYLNGETN-----VKPGDILRVKVEHADEYDL 436 P+ID V++ + + ++PG + R V + +DL Sbjct: 407 PDIDPVVFVTEDKSKGLPPIEPGQMRRCNVIGSSLFDL 444 >UniRef50_B3EPX5 Ribosomal protein S12 methylthiotransferase rimO n=11 Tax=Chlorobiaceae RepID=RIMO_CHLPB Length = 442 Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 168/448 (37%), Positives = 249/448 (55%), Gaps = 34/448 (7%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 +T I +SLGC KN VDSER++ + R +G D+AD+VI+NTCGFI A ES Sbjct: 9 MTRNRSIFLLSLGCSKNTVDSERLIGQARRKGLSFTNEPDEADIVIINTCGFIADAKTES 68 Query: 64 LEAIGEAL--NENGKV---IVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHV-HHY 116 ++ I A +NG++ V GCL A ++R P+V G ++L + Y Sbjct: 69 IDEILAAAEKRKNGEIEALYVMGCLSALYAAELRAELPEVDRFFGTADLPEILNILGTAY 128 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 P + L L+P HYA+LK+SEGC+ C+FC IP MRG S + ++L Sbjct: 129 DPATRFERSL---------LSPSHYAWLKLSEGCSRTCSFCAIPKMRGRYKSESMEDLLQ 179 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRL 235 EA RL GVKE+ +I+QD + YG+D+ + ++ L +LS L W RL Sbjct: 180 EATRLKAKGVKELNLIAQDITPYGLDLYGTSRLND----------LMRELSDLNFDWIRL 229 Query: 236 HYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQ--LARIKQWR 292 Y YP +VI M E + I YLD+P+QH RIL MKR +D+Q + ++ R Sbjct: 230 LYAYPLDFPLEVIDTMRERENICDYLDMPVQHICDRILASMKR--GIDKQGTIGLLESIR 287 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA-NALPDQV 351 + P + LR+T IVG+PGET +F+ LL F++E R DR+GCF YS E A + L D + Sbjct: 288 KRNPNIRLRTTMIVGYPGETRAEFEELLQFVREFRFDRLGCFPYSHEEHTAAYDNLEDDI 347 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 PEE K+ER M+LQ+ IS ++ + + + V+++EV++ A R+ DAPE+D Sbjct: 348 PEEEKQERVGELMELQEGISEKKNRALEEKALKVLVEEVEDNLAFARTEYDAPEVDNECV 407 Query: 412 LN-GETNVKPGDILRVKVEHADEYDLWG 438 L+ +++PGD +E + Y+L G Sbjct: 408 LDTAGIDIRPGDFCMATIEESSAYELVG 435 >UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7K6_GEMAT Length = 473 Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 172/453 (37%), Positives = 257/453 (56%), Gaps = 39/453 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K G V+LGC KN VDSER L +L G + V DAD+V+VNTCGFID+A ES+EAI Sbjct: 3 KFGLVTLGCDKNTVDSERYLADLVAHGAEAVQDLRDADVVVVNTCGFIDAAKAESIEAIV 62 Query: 69 EA--LNENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 +A L + G+ V GC+ + +D++ E P+V G +++ VP+ Sbjct: 63 DAARLKDEGRCKAVFAIGCMVERHKDELLEALPEVDVFLGNSETDRL-------VPELVE 115 Query: 123 NPFL--SLVPEQGVKL---TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + SLV GV+L H YLKISEGC+H C FC IP MRG S + E++ E Sbjct: 116 RGLIGGSLVEHPGVRLFSGDAAHVRYLKISEGCDHGCAFCAIPLMRGKHRSFALDELVRE 175 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A+ L G +EI +++QD + YG D + +G + + +L + S W R Y Sbjct: 176 AQLLEVQGAREINLVAQDLAHYGRDRR------DGHGLPELLEALVRETSI--PWIRNMY 227 Query: 238 VYPY---PHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +Y P + +VI A +I+ YLD P+QH S +L M+RP R+ ++R+I Sbjct: 228 LYSTGITPRLLEVIA--AHPRIVRYLDTPMQHGSDAVLTRMRRPERQKTIRERLARYRDI 285 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P+L +R++ IVGFPGETE+DF +L DFL+E + DRVG F YSP EG A+A+ D V + Sbjct: 286 VPDLAVRTSVIVGFPGETEDDFNILCDFLEEMQFDRVGVFTYSPQEGTRAHAMEDDVADS 345 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYL 412 +K+ER R +LQ+ I+AER + +GRE V+++ + + + R+ A +IDG V++ Sbjct: 346 IKQERKERIEELQRAITAERYERFLGREARVLVERRGDYPDVWMARAPWQADDIDGLVHV 405 Query: 413 N-----GETNVKPGDILRVKVEH-ADEYDLWGS 439 + + V PG + V ++H D+YD + Sbjct: 406 DVPESMRKVLVSPGAFVDVTIDHVVDDYDFAAT 438 >UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA6_9FIRM Length = 451 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 165/462 (35%), Positives = 250/462 (54%), Gaps = 44/462 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI +LGCPKN DSE + G+ S DAD+V+VNTCGFI A ES++AI Sbjct: 2 KIFIETLGCPKNFNDSEYAYGSFFSAGFKKADSISDADVVVVNTCGFIHDAKVESIDAIF 61 Query: 69 EALNE---NGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYV------- 117 +A + + ++V+GCL + +++++ P+V G + Y + E + Sbjct: 62 DAAQKKKSSAILVVSGCLSQRYMEELKKEMPEVDIFAGVNDYFNLPEICKKRLNDGKSKG 121 Query: 118 ----PKPKHNPFLSLVPEQGVKL--TPRHYAY-LKISEGCNHRCTFCIIPSMRGDLVSRP 170 P+ N F PE G + + +Y +KISEGCN++C FCIIPS+RG SR Sbjct: 122 AVLTKSPQKNDF----PEPGSRAFENVNNNSYTIKISEGCNNKCAFCIIPSIRGSFRSRY 177 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +++ EA+ LV G KEI++I QD +A+G D ++ + ++ L ++SK+ Sbjct: 178 IQDIVKEAEFLVTLGAKEIILIGQDVTAFGTDRRN----------EDTLALLLREVSKIE 227 Query: 231 --IWTRLHYVYPYPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 W RL Y Y D++I +M K+ Y+D+P+QH S +L M+R D + R Sbjct: 228 GEFWIRLMYCYDNKITDELIAEIMRNKKVCKYIDMPIQHISDNVLSAMRRGSDSDLIIER 287 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 I+ R ++ +R+T I GFPGE+EEDF L +F+KE DR+G F YS EG A A Sbjct: 288 IRALRSNIDDIHIRTTLITGFPGESEEDFNKLYEFVKEQEFDRLGVFSYSEEEGT-AAAK 346 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-------DEEGAIGRSM 400 Q+P+E++E+R + M+LQ +IS + + VG+ + V+ID V E IGR+ Sbjct: 347 CKQIPDEIREQRRDSIMRLQSEISKNKNKMMVGKTMKVLIDGVIEGEQSGSERMLIGRTE 406 Query: 401 ADAPEIDGAVYLNGETNVKP-GDILRVKVEHADEYDLWGSRV 441 DAPEID V K G+ V + + EYD++G V Sbjct: 407 FDAPEIDNCVIFKPAICGKDVGEFTYVHITGSSEYDVYGEEV 448 >UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Dictyoglomus RepID=RIMO_DICT6 Length = 440 Score = 265 bits (676), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 159/448 (35%), Positives = 245/448 (54%), Gaps = 25/448 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K G + LGC KN VD+E ++ L+ GY P +AD+V+VNTC FI A QE+ E I Sbjct: 3 KAGIIHLGCSKNQVDTEILMGFLKELGYTFTPYLGEADLVLVNTCAFIKPAWQEAEENIN 62 Query: 69 -----EALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + N+N K++VTGC + E ++ + +P V GP Y++ + + + H Sbjct: 63 FLKEYKENNKNLKIVVTGCYVERFEKELEDRYPFVDLFIGPGEYDKFVSLITSNGERKIH 122 Query: 123 NP----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + F+ V ++P + Y+KISEGCN+ C++C IP +RG L SR I +++ E Sbjct: 123 SSPASSFMYTHKMPRVLISPNFWVYVKISEGCNNFCSYCTIPFIRGRLRSRSIDDIIKEV 182 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLH 236 + LV GVKEI +I+QDT+ YG D+ K+++V L + + + + R+ Sbjct: 183 EILVQKGVKEINLIAQDTTRYGEDLYG----------KSALVDLLKSIENIKGDFYVRIL 232 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D+I + K++PY DIP+QH + ILK M R D + RE Sbjct: 233 YSYPSRVTKDLINFIKVSEKVVPYFDIPIQHVNDEILKKMNRSYKKDDIIRVWSTIRENF 292 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 + +R+T +VGFPGETEE+F+ L+ F+K DR+G F Y EG + Q+ E+ Sbjct: 293 EDAVIRTTVMVGFPGETEENFEELIAFIKAYPFDRLGAFTYYNEEGTISKNFDGQIDEDE 352 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL--N 413 K R++ M Q++IS + + +GRE VII+ + IGRS +APE+DG + + Sbjct: 353 KIRRYDILMSTQKEISKKLNAKLLGREFDVIIENEKGKYFIGRSWREAPEVDGVIMIPKE 412 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ GD +RVK++ YDL G V Sbjct: 413 GSRSISIGDRVRVKIKKYRAYDLLGELV 440 >UniRef50_A3EVU0 RNA modification enzyme, MiaB family n=3 Tax=Leptospirillum RepID=A3EVU0_9BACT Length = 483 Score = 264 bits (675), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 175/460 (38%), Positives = 266/460 (57%), Gaps = 32/460 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 SK +G VSLGCPKNLVD+E ++ L +G+ V+P ++A++++VNTC F+ A + Sbjct: 29 SKGLKAKTVGIVSLGCPKNLVDTETMIHSLSEKGFRVIPDLEEAEVIVVNTCSFVTDARK 88 Query: 62 ESLEAIGEA--LNENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPH---SYEQVLEH 112 ES++ + E ENGK ++ TGCL ++ +++ + P+V + P S ++L Sbjct: 89 ESIDTLLEMAQYKENGKAKILVGTGCLVSRYREELPGLLPEVDMLLSPSEEVSIGELLSS 148 Query: 113 VHHYVPKPKHNPFL-SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 P L S +P + +LTP H AYLKISEGC+H C+FC IP RG VSR Sbjct: 149 PESKTSLPSTPLILPSSIPFRRKRLTPNHRAYLKISEGCDHTCSFCAIPLSRGLQVSRTR 208 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +L E + + D GV+E+ +I+QD + YG D++ G L E++ ++G Sbjct: 209 ESLLEEVRMMADEGVREVTLIAQDLTRYGSDLEDGEGLPR----------LLEEIDRIGR 258 Query: 232 --WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W RL Y YP D ++ ++ + IL YLDIP QH S +LK M RPG+ + + I Sbjct: 259 IPWVRLLYAYPTQVTDRLLKVIRDSSTILKYLDIPFQHVSGTVLKRMNRPGNRESTMRLI 318 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R I P++TLR+TFIVGFPGETEE+F + +FLK +RLD VG F +S EG + + Sbjct: 319 DRIRRILPDITLRTTFIVGFPGETEEEFLEIEEFLKWSRLDHVGVFPFSREEGTPSFDMD 378 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPE 405 Q+P +K +R R M +Q+ IS E+ ++ +G+ + V+I+ E+ + GR AP+ Sbjct: 379 GQIPSRLKTQRRKRLMGVQKAISLEKKKDWLGKVMPVLIEGPSEQSPLILSGRLPGMAPD 438 Query: 406 -IDGAVY-LNGETNVKPGDILRVKVEHADEYDL--WGSRV 441 IDG V L+GE + PG I+ KV+ YD+ W + V Sbjct: 439 GIDGEVLVLSGEAS--PGSIVSCKVKKVHAYDIEVWETSV 476 >UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MMU1_9FIRM Length = 446 Score = 264 bits (674), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 171/454 (37%), Positives = 258/454 (56%), Gaps = 34/454 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G VSLGCPKN D+E +L ++ G+ +V AD+VI+NTCGFI SA +E++E I Sbjct: 6 KVGMVSLGCPKNQCDAELMLAKIAKAGFKIVNEAGLADVVIINTCGFIQSAKEEAIEEIM 65 Query: 69 EALNE-----NGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 EA++ N K+IVTGCL + + Q+ E P++ + G + ++E ++ + + Sbjct: 66 EAISRKNDGINKKIIVTGCLAERYQKQMDEEFPEIDAVVGIAKNDDIVEIINSVMLDRRV 125 Query: 123 NPFLSLVPE--QGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F + +G KL T HYAYL+I++GC+++C++C IP +RG + SR + ++ EA Sbjct: 126 ITFGDKLCHNMEGDKLQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKMENIIEEA 185 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLH 236 K+ + GVKE+++++QD +AYG+D+ K ++ L +QL K+ GI W RL Sbjct: 186 KKFAENGVKELVIVAQDVTAYGIDLYK----------KYALPDLLKQLCKIDGIKWIRLL 235 Query: 237 YVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR---IKQWR 292 Y YP D++I + E K+L Y+DIP+QH + IL+ M R G D Q R K R Sbjct: 236 YCYPERMTDELIETIKTEDKVLNYIDIPIQHCNKEILRNMYRGG--DEQSLRELFAKLRR 293 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 EI P + LR+T I GFPGETEE F L +F+ + + +R+GCF YS E A +PDQV Sbjct: 294 EI-PGVVLRTTLITGFPGETEEQFSELAEFVNDIKFERLGCFAYSAEEDTPAAEMPDQVD 352 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAV 410 E ++ R + Q+ E +G V+ + D + GRSM APEIDG + Sbjct: 353 EGERQRRADIITGEQEIRMGEYYAGMIGNTYEVVCEGFDRYSDMYFGRSMHFAPEIDGMI 412 Query: 411 YLNGETNVKP---GDILRVKVEHADEYDLWGSRV 441 Y + P GD + VK+ E +L G RV Sbjct: 413 YFTSAKDKGPLTIGDFVNVKITDVLENNLLGERV 446 >UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP4_9CHLO Length = 456 Score = 263 bits (673), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 172/469 (36%), Positives = 258/469 (55%), Gaps = 53/469 (11%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--- 68 VSLGCPKN VD E +L +L G+D++ ++DAD +IVNTCGF++ A ES++AI Sbjct: 1 MVSLGCPKNTVDGEVMLGDLFANGFDIIDEHEDADAIIVNTCGFVEDAKNESVDAILAAA 60 Query: 69 ------EALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSY--------EQVLEHV 113 E + KVIVTGCL + +++ + P+V + G +Y EQ+ Sbjct: 61 AMKAEQEQGGKKKKVIVTGCLAQRYAEELADEMPEVDVVMGFENYKDLPNTLGEQLGVET 120 Query: 114 HHYVPKPKHN---------PFLSLVPEQGVK-LTPRHYAYLKISEGCNHRCTFCIIPSMR 163 K PF PE K LTP+HYAYL+++EGC+H+CTFC IP R Sbjct: 121 GAAADGAKRGRVRVGTASPPFR---PEALRKRLTPQHYAYLRVAEGCDHKCTFCAIPGFR 177 Query: 164 GDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC 223 G S+P ++ EAK L D G +E+ +I++DT+ +G+D+K G + L Sbjct: 178 GKFRSKPWDPIIEEAKALADTGARELCLIAEDTNQWGMDLKASDG--------RGLAELL 229 Query: 224 EQLSKL-GI-WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGS 280 E L+ + G+ W R+ Y YP D +I +A+ ++ Y+DIPLQH + L M RP Sbjct: 230 EALAVIDGVEWIRILYAYPSYFSDPLIDAIADIPQVAKYIDIPLQHITNLSLLRMNRP-- 287 Query: 281 VDRQLAR--IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSP 338 RQ + + R+ P L LR+TFI GFPGETEE+ + L+ F +E + +R+G F YS Sbjct: 288 -PRQHTEDLLYKLRDRIPGLALRTTFISGFPGETEEEHEDLMRFCREFKFERLGAFAYSE 346 Query: 339 VEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAI 396 +G A PDQV + V++ R ++ + QQQIS + +VGRE+ VIID + E Sbjct: 347 EDGTPAATYPDQVEQAVRDLRRDQLIAQQQQISEDFAASRVGREVDVIIDGYNPEFDAWT 406 Query: 397 GRSMADAPEIDGAVYL----NGETNVKPGDILRVKVEHADEYDLWGSRV 441 GR+ +AP+ID V++ G+ ++ G + R K+ +DL + V Sbjct: 407 GRTSLEAPDIDPIVFVADPTGGQRALEMGQMRRCKIVGTSLFDLEANLV 455 >UniRef50_Q2LQ68 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophus aciditrophicus SB RepID=RIMO_SYNAS Length = 453 Score = 263 bits (673), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 170/455 (37%), Positives = 255/455 (56%), Gaps = 34/455 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + VSLGCPKNL+DSE + L G +V ++AD++++NTC FI A +ES++ Sbjct: 3 ETSVHIVSLGCPKNLIDSEVMAALLEQAGCRIVSGPEEADILLLNTCAFILPAREESIDE 62 Query: 67 IGEAL--NENGK---VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I + GK +IVTGCL + ++ P+V G + +H+ + + Sbjct: 63 IFRLAEWKKAGKCRHLIVTGCLPQRYGAELAAELPEVDLFLGISEVPNIADHLRVLM-EG 121 Query: 121 KH---------NP-FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 KH NP FL + TP + AYLKI+EGC++RC++CIIP +RG SRP Sbjct: 122 KHSEKNRVIVTNPLFLMDAGHPRLLSTPPYSAYLKIAEGCSNRCSYCIIPRLRGKARSRP 181 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I ++L EA+ LVD GV+E+++++QDT+AYG D++ G+P ++ L+ L Sbjct: 182 IEDILREAEDLVDRGVRELILVAQDTTAYGRDLE-------GKPTLALLLRELAGLNTLA 234 Query: 231 IWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR-- 287 W R+ Y YP D+++ ++A + +I YLD+P+QH IL MKR G D L R Sbjct: 235 -WIRILYTYPTGLTDELLNVIANQDRICSYLDVPIQHIDDDILAAMKRRG--DSHLIRNS 291 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 +++ R + P+L LR++ I GFPGET F L+ F++E R D +G F YSP EG A L Sbjct: 292 LERARAVIPDLALRTSLITGFPGETPAKFHRLIAFVQETRFDHLGVFPYSPEEGTPAEKL 351 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAP 404 P QV + KE R N M+ Q IS E Q VG V+I+ + IGR AP Sbjct: 352 PRQVSQRTKETRRNLLMEEQAVISHEINQTLVGSLQEVLIEGPSSSPDYPMIGRCRRQAP 411 Query: 405 EIDGAVYLN-GETNVKPGDILRVKVEHADEYDLWG 438 +IDG Y+ G+ PG +++ ++ AD+YDL+ Sbjct: 412 DIDGLTYVKGGKQPFLPGSLVQCRIVAADDYDLFA 446 >UniRef50_A0LIM0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RIMO_SYNFM Length = 444 Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 161/444 (36%), Positives = 246/444 (55%), Gaps = 32/444 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE- 69 VSLGC KNLVDSE ++++L GY++ P A +++VNTCGF++SAV+ES++ + + Sbjct: 7 ALVSLGCAKNLVDSESMVSQLIELGYEMTPEVSQAALILVNTCGFLESAVRESIDTVLQL 66 Query: 70 ----ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 A K++V GC+ + ++ + P+V G + + + Sbjct: 67 AGYKASGSCEKLVVAGCMVQRYGKKLLGLLPEVDLFLGTSHCHALKSFIRDHEAGSSERL 126 Query: 125 FLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ P+ RH AY+KI+EGC +RC FC+IP +RG SR ++L EA Sbjct: 127 RIAF-PDHVDNGADRHLVEGRSSAYVKIAEGCGNRCAFCLIPRLRGPYRSRRAVDILREA 185 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 RLV G KE+ +++QDT+A+G D GE + ++VSL E L ++ W RL Sbjct: 186 HRLVACGAKELNIVAQDTTAFGSD--------RGE--EHALVSLLESLEEIEKLEWVRLL 235 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP ++I M++ K++PYLDIPLQH PRIL M R G+ ++ + R Sbjct: 236 YAYPDRITPELIRTMSQSRKVVPYLDIPLQHCVPRILASMGRSGTDPERI--VDAIRSGI 293 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + LR++ IVGFPGETE DFQ L F++ + +G F +SP G A +PD+VP +V Sbjct: 294 PGVALRTSLIVGFPGETEADFQALTAFVECTGFEHLGVFAFSPEPGTRAARMPDRVPPDV 353 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYL 412 +ER ++LQ+ IS RL+ VGR + V+++ E + GR APE DG V + Sbjct: 354 AQERRKVLLELQRGISRRRLESLVGRVLPVLVEGFHPETDLLLTGRLAVQAPEADGTVLI 413 Query: 413 NGETNVKPGDILRVKVEHADEYDL 436 PG+I+R +V A +YD+ Sbjct: 414 TDGIGT-PGEIMRCRVTAAHDYDV 436 >UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDC7_9FIRM Length = 433 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 161/445 (36%), Positives = 256/445 (57%), Gaps = 26/445 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+GFVSLGC KNLVDSE+++ L + +++V A+ +I+NTCGFI+SA +E++ I Sbjct: 2 KVGFVSLGCSKNLVDSEKMMGMLVSGQHELVSDPAQAEAIIINTCGFINSAKEEAIATIF 61 Query: 69 EAL----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + ++ ++IV GCL + ++ + E P++ + Y H+H + + Sbjct: 62 KMAEYKKDKCKRLIVVGCLAQRYKETLEEEIPEIDAVISIREYP----HLHEILKELLDE 117 Query: 124 PFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 L + K++ R + AYLKI+EGC++RCT+C IP +RGD VS P+ +++ EAK+L Sbjct: 118 HDLVSYDKCERKVSSRPWTAYLKIAEGCSNRCTYCAIPLIRGDNVSFPMEDLVKEAKQLA 177 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 GVKE+++I+QDT+ YG+D G+ ++ ++ W R+ Y+YP Sbjct: 178 QRGVKELVLIAQDTTKYGLD-------RYGKLSLLELLKQLHEIEGFH-WIRILYMYPDE 229 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++I MA K+LPY DIP+QHA+ R+LK M R G+ + L ++ R TLR Sbjct: 230 IEDELIEGMARLPKVLPYFDIPMQHANNRMLKAMNRRGTKEEVLRLCEKIRNTFENPTLR 289 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 +TFIVGFP ET + F L++F+ + DR+G F YSP E A + V EE K+ R Sbjct: 290 TTFIVGFPSETHDHFNELMEFVNDVHWDRMGAFPYSPEEDTPAFDMEQDVSEEEKQRRLE 349 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI----GRSMADAP-EIDGAVYLNGET 416 + M Q++IS + Q+ +G+ I V+++ D+EG GR + AP E+DG V + Sbjct: 350 QLMLRQEEISLQNQQKMIGQVIEVLVE--DQEGLSGLYRGRGKSSAPDEVDGIVIFKSDR 407 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 + G ++V+V A +DL G V Sbjct: 408 FIPYGSFVKVRVTEAFPHDLKGVEV 432 >UniRef50_A9A0B5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RIMO_DESOH Length = 440 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 162/448 (36%), Positives = 241/448 (53%), Gaps = 30/448 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE--- 65 K+ SLGC KN VDSE +L EG V AD+++VNTC FI+ AV E+++ Sbjct: 2 KVHLTSLGCAKNQVDSELMLGAFAAEGLTVCDDPAGADVLVVNTCAFIEDAVNEAVDTIL 61 Query: 66 AIGEALNENG--KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV--------H 114 A+ +E ++IV GCL + +++ P+ G +Y +V+E V Sbjct: 62 ALARYKSEGSCRRLIVCGCLPERFGEELAGALPEADFFFGTGAYHRVIEAVAGKESTLSR 121 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 +P P P + ++ + TP H Y+KI+EGC+ RCT+CIIP +RG SRP ++ Sbjct: 122 CTLPPPDAVP-MQAAADRRICATP-HTVYVKIAEGCDRRCTYCIIPRLRGRQRSRPPADI 179 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIW 232 + EA+ LV AG KE+++++Q+T+AYG D+ PV S+ SL LS IW Sbjct: 180 VVEARGLVAAGAKELVLVAQETTAYGADLS--------PPV--SLASLLMALSDAVGDIW 229 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ Y++P D+I +M E + Y D+P+QHAS R+LK M R + Sbjct: 230 VRVLYMHPDTMDPDLIRVMTERDNLCSYFDVPVQHASDRVLKRMGRRHTAADLHRLFDDI 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P+ LR+T +VGFPGE DF+ LLDF+ D +G F YS E ++ L V Sbjct: 290 RRADPDAVLRTTVLVGFPGEKPADFEKLLDFITGVAFDHLGAFIYSDDEALSSHGLDGHV 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAV 410 + R++R M Q IS+ RL ++VG V+++E E+G GR+ APE+DG V Sbjct: 350 SSKTARHRYDRVMTAQIDISSRRLAKRVGSREPVLVEEKAEDGLFFGRAWFQAPEVDGDV 409 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 +G + PGD + V++ A YDL G Sbjct: 410 CFSGAGDYAPGDRVSVRITGASAYDLTG 437 >UniRef50_B8J4P8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4P8_DESDA Length = 442 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 169/457 (36%), Positives = 239/457 (52%), Gaps = 58/457 (12%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ +SLGCPKN VDSER+L L V AD+V +NTCGFID AV+ES+ A+ Sbjct: 11 KVWSLSLGCPKNRVDSERLLGSLGAP-VSHVEHMGRADLVFINTCGFIDPAVRESVRAVL 69 Query: 69 EALNENGK------VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 +A G+ + V GC+ + G + + L V ++P Sbjct: 70 DAGQRLGRCSKKPLLAVGGCMVGR--------------YGAENLAEDLPEVDLWLPTADL 115 Query: 123 NPFLSLVPEQGVKLTPR--------------HYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + +V E TP YA+LKI EGC H+C FC IPS+RG L S Sbjct: 116 DRWPGMVAEALALPTPPVRMPGGGRLLSTGPSYAWLKIGEGCRHKCAFCTIPSIRGGLHS 175 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 P ++ EA+ L+ GV+E+ +++QD +A+G D+ G NG P SL E+L+ Sbjct: 176 LPAEYIVDEARALLGQGVRELALVAQDLTAWGADL----GMKNGLP------SLLEKLAA 225 Query: 229 LG--IWTRLHYVYPYPHVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRP--GSVD 282 L W RL Y+YP +++ L+ + +LPYLDIPLQHA P +L M RP G+ Sbjct: 226 LDGLAWLRLLYLYPSGVTPELLALIRDTGAPLLPYLDIPLQHAHPDVLSRMGRPFAGNPR 285 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 R L ++Q P LR+TFIVG+PGET+E F+ L F++E+ VG F Y +G Sbjct: 286 RVLDAVRQ---NLPHAALRTTFIVGYPGETDEQFESLCRFVEESAFQHVGVFAYQAEDGT 342 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRS 399 +A LPDQVP+ VK+ R + M +Q IS L VG + V++D E GR Sbjct: 343 EAATLPDQVPDAVKQWRRDTLMDIQADISERLLAAHVGSRMQVLVDAPHPEWPGLHSGRV 402 Query: 400 MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 APE+DG Y++G V PG ++ + EYDL Sbjct: 403 WLQAPEVDGITYVSGP-GVAPGALVECDIVENTEYDL 438 >UniRef50_C0GKG0 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKG0_9FIRM Length = 440 Score = 257 bits (657), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 174/446 (39%), Positives = 247/446 (55%), Gaps = 26/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ VSLGC KNLVDSE +L L +G+ + + A ++I+NTCGFID+A +ES+ I Sbjct: 5 KVAVVSLGCAKNLVDSETMLGLLNEDGFTLTTDPEKAHVIIINTCGFIDAAKEESIAKIL 64 Query: 69 EALNENGK----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 E K ++ GC+ + D++ + P+V + G + + + K Sbjct: 65 EMAAYKEKNCRLLLAAGCMAQRFADELLDELPEVDGLFGTNDVHGAAVAIRRGLAGEKVS 124 Query: 122 --HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F + TP H AYLKI+EGC++RCT+C IP++RG SR V+SEA+ Sbjct: 125 FTQGEFAGSDDAPRLLSTPSHTAYLKIAEGCDNRCTYCAIPAIRGPYQSRDGQAVVSEAQ 184 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLHY 237 L GVKE+ +I+QD + YG D RTG K + L +L+ + G+ W RL Y Sbjct: 185 SLAAGGVKELNLIAQDITLYGTD---RTG-------KAQLPKLLGELAAIDGVHWIRLLY 234 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP +I +A E K+ YLD+PLQH S +IL+ M R + D+ L I+ R P Sbjct: 235 AYPERLDQRIIEAVAREEKVCKYLDLPLQHGSDKILRRMGRKTTADKILKLIETLRREVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + LRS+FI GFPGE EE+F +L FLKEA+LDRVG F YS EG A A +QVP EVK Sbjct: 295 GIVLRSSFIAGFPGEGEEEFGEMLAFLKEAQLDRVGFFAYSREEGTPAAAYSNQVPAEVK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEIDGAVYL- 412 EER R + LQ IS ++ Q+ VG+ + ++D D + RS APE+DG + + Sbjct: 355 EERVRRAVALQSAISEKKQQQLVGKTVTAMVDGSSAQDPSILLARSYMQAPEVDGYIRIQ 414 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 N + + G +L V + D YDL Sbjct: 415 NSDKKAQKGGLLPVTITGFDGYDLLA 440 >UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Thermotogaceae RepID=RIMO_FERNB Length = 431 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 156/451 (34%), Positives = 246/451 (54%), Gaps = 43/451 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ + LGC KN D L+ G++VV +DAD V+++TCGFI A QES++ I Sbjct: 5 KLYVIVLGCAKNEADFSLFKYHLKQLGHEVVDDVEDADGVVIDTCGFIVDAKQESIDTIL 64 Query: 69 EALN-----ENGKVIVTGCLGAKEDQIREVHPKVL-----EITG------PHSYEQVLEH 112 E + + KV VTGCL + +PK L E+ G P + + + Sbjct: 65 EFASIKKQKPDFKVYVTGCLVQR-------YPKDLPLEIPEVDGWFGVIPPKNLAESINK 117 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 Y+ P +++ +G + YAY+KI++GC+ CTFC IP +G VSR + Sbjct: 118 TKKYITDP-----VAVYEFEGRVDSDLPYAYVKIADGCDRACTFCTIPKFKGGFVSRKLE 172 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--G 230 ++ E + L++ G KEI++++QDT+ YGVD+ K + L ++++ + Sbjct: 173 DIEKEVRYLIENGKKEIVLVAQDTTGYGVDLYG----------KQMLPELLKRINDIDGN 222 Query: 231 IWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W R+ Y++P D+++ + K++ Y DIP+QH+S ILKLM R S + Sbjct: 223 FWIRVMYMHPDHVTDEILKGFSYEKVVKYFDIPIQHSSDNILKLMGRTKSTKELEELFDK 282 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R + P+ LR++ IVGFPGET++DF+ L+DF++ DR+G F YS E A + LP++ Sbjct: 283 IRSLYPQAVLRTSIIVGFPGETKDDFEQLIDFIRTIEFDRLGGFVYSDEEDAASYNLPNK 342 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV 410 V + ++R + M++Q +IS R Q VG+ I V+ +E IGRS DAPE+DG V Sbjct: 343 VSLKTAQKRLDTLMEVQAEISFLRNQRLVGKVIDVLFEEEVNGVIIGRSYMDAPEVDGNV 402 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++ G + G +VK+ AD YDL G V Sbjct: 403 FVKGHGINRFG---KVKITEADTYDLEGELV 430 >UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Bacteria RepID=RIMO_PORG3 Length = 434 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 158/448 (35%), Positives = 250/448 (55%), Gaps = 40/448 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVV--PSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ ++LGC KNLVDSE ++ + + GY V P+ ++V+VNTCGFI A +ES+ Sbjct: 5 RVDVITLGCSKNLVDSEVLMRQFLSNGYTVHHDPASVCGEIVVVNTCGFIGDAQEESVNT 64 Query: 67 IGEALNEN-----GKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHV-HHYVP 118 I E + G + V GCL + ED +E+ P+V G ++Q++ H+ Y Sbjct: 65 ILEMVEAKKAGRIGSLYVMGCLSERFREDLKKEI-PEVDAYYGKFDWKQLISHLGKSYYA 123 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + ++ L+ TPRHYAYLKISEGC+ C++C IP + G SRP+ +++ E Sbjct: 124 EAENRRKLT---------TPRHYAYLKISEGCDRSCSYCAIPIITGRHRSRPMEDLVEEV 174 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLH 236 + LV G +E +I+QD + YG+D+ + L +LS + G+ W RLH Sbjct: 175 RMLVKHGTREFQLIAQDLTFYGLDLYG----------ANRLAELTARLSDIKGVEWLRLH 224 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++P+M E + YLD+ LQH S +L+ M+R + I++ R Sbjct: 225 YAYPAQFPLDLLPVMRERPNVCKYLDMALQHISDPMLRRMRRRITKAETYELIERIRTEV 284 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA--DANALPDQVPE 353 P + LR+T + G PGETE DF+ LL F+++ R +R+G F YS G D N D +PE Sbjct: 285 PGIHLRTTLMTGHPGETERDFEELLQFVRDIRFERLGAFTYSHESGTYCDKN-YQDDIPE 343 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV--- 410 VK+ER M +Q++ISA + K+G + V+ID ++ +GR+ D+PE+D V Sbjct: 344 SVKQERLGELMAVQERISAAHNEAKIGSRLRVVIDRAEDGFYVGRTEYDSPEVDPEVLIP 403 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 +++G+ +KPG +V A+ +DL+ Sbjct: 404 FVSGQ-ELKPGRFYMAEVTGAEPFDLYA 430 >UniRef50_C0QIB5 2-methylthioadenine synthetase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QIB5_DESAH Length = 441 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 165/453 (36%), Positives = 253/453 (55%), Gaps = 43/453 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--AL 71 SLGC +N VDSE +L L + G+ +V AD++IVNTCGFI +A E+++ I + Sbjct: 7 SLGCCRNQVDSEVMLGRLASAGHGIVHDPSQADVIIVNTCGFISAASAEAVDTILDMAVY 66 Query: 72 NENGK---VIVTGCL--GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 +G+ ++VTGCL K D + P+V G + ++++ V + + Sbjct: 67 KRDGRCKRLVVTGCLPERFKHDDLGGELPEVDVFLGTGACDEIVRVV-------ESTGSM 119 Query: 127 SLVPEQGVK----------LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 LVP+ + LT + A++KISEGC+ CT+CIIP +RG SR + V++ Sbjct: 120 VLVPDVLARQMQGHPLPRCLTLDYLAHVKISEGCDRHCTYCIIPRLRGIQRSRGVDAVVT 179 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE-PVKTSMVSLCEQLSKLG--IWT 233 E++ LV GVKEI+++ ++TS YGVD+ +GE + + +L +++ L +W Sbjct: 180 ESELLVKNGVKEIVLVGENTSDYGVDL-------DGEVNLAGLLTTLSQRIKALDPDVWI 232 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGS---VDRQLARIK 289 RL Y +P DVI ++A + Y D+P+QHAS RIL+ M R + +DR +A I Sbjct: 233 RLLYTHPSSLDFDVIRVIAGLDNVCTYFDVPIQHASSRILRRMGRNYTREDLDRLIAFI- 291 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R+ P+ LR+T I GFPGETE DF LL F+KE R D++G F YS + ++ L D Sbjct: 292 --RKTAPDAALRTTLITGFPGETEADFNELLAFVKEIRFDQLGVFAYSDSDDLASHGLKD 349 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDG 408 V EE E R + M Q +IS + +G+ V+++E +EG +GR+ APE+DG Sbjct: 350 HVDEETGEARRDAIMAAQAEISESLNEAYLGKTFTVLVEENPDEGIFLGRTNFQAPEVDG 409 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++ GE N+ G +RVK+ YDL G V Sbjct: 410 ITFIYGE-NIDIGTFVRVKITETHAYDLVGELV 441 >UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Thermotogaceae RepID=RIMO_PETMO Length = 435 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 153/452 (33%), Positives = 255/452 (56%), Gaps = 39/452 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K V LGCPKN D E L+++GY + A+ + ++TCGFI+ A +ES+E I Sbjct: 3 KFHIVKLGCPKNDADMEIFKGLLQSKGYKYESNPQLANYIFIDTCGFIEEAKKESIETIF 62 Query: 69 EAL-----NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH------- 115 E + N+N KVI GCL + D I + P++ + G S + ++E + + Sbjct: 63 EYVSLKDNNKNLKVIPIGCLTQRYFDDILKDIPEIDGLYGVLSPKTIVEKIENGEYFFKR 122 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 +P+ ++ + +P+ HYAY+KI +GC+ C FC IP+ +G SR I E+ Sbjct: 123 DIPETLYDCKIRAIPDS-------HYAYVKIGDGCSRNCAFCSIPTFKGKPKSRSIEEIN 175 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWT 233 E + LV GVKEI+++SQD + YG+D K ++ L ++L+ + W Sbjct: 176 EEVEFLVSKGVKEIILVSQDNTLYGIDNYQ----------KQALPDLLDKLNNIKGKFWI 225 Query: 234 RLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R+ Y++P +++I + K+L Y D+P+QH S +IL+ M G ++ IK + Sbjct: 226 RVMYLHPDFLSEEIIESIHRNEKVLNYFDVPIQHISDKILQSM---GRHKKRNELIKLFE 282 Query: 293 EICPE-LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +I E +R+T +VGFPGE EDF+ L+DF+KE + +R+G F +S E + LP+Q+ Sbjct: 283 KIRKEPSAIRTTLMVGFPGEKAEDFEELVDFVKEIKFERMGSFIFSKEENTKSFTLPEQI 342 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 E++K++R N M +Q +IS +++ +G + V+++E ++ +GRS DAPEIDG VY Sbjct: 343 DEQIKKQRQNELMTVQSEISKNIMEKYIGETLEVLLEEKEDNVYVGRSYLDAPEIDGNVY 402 Query: 412 LN--GETNVKPGDILRVKVEHADEYDLWGSRV 441 + G+ + G+ ++V + + EYDL G V Sbjct: 403 IKNFGDKELTFGNFVKVTITGSYEYDLEGEIV 434 >UniRef50_Q1MQJ5 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Desulfovibrionaceae RepID=RIMO_LAWIP Length = 440 Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 161/455 (35%), Positives = 251/455 (55%), Gaps = 41/455 (9%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M+ +P + +SLGCPKN VD+ER+L L + ++AD V +NTC FI +AV Sbjct: 1 MNSHSPSLRCHAISLGCPKNRVDTERLLGSLGIP-LTFIDYPNNADFVFINTCSFIHTAV 59 Query: 61 QESLEAI------GEALNENGKVIVTGCLGAK--EDQIREVHPKV---LEITGPHSY-EQ 108 QES+ I E L+E +IV GC + E +++ P+V L+ S+ EQ Sbjct: 60 QESVNTILQLVADVEELSEKPFIIVAGCFVGRYGEKILKKDIPEVDLWLDNKEIESWNEQ 119 Query: 109 VLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 +L + N + + + T + YA+LKIS+GC H C+FC IPS+RG L S Sbjct: 120 ILLAL---------NIKSTFLVTDRIITTGKSYAWLKISDGCQHSCSFCTIPSIRGSLHS 170 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 I E++ E++ ++D GVKE+++++QD +A+G D+ + G + +L + L Sbjct: 171 YSIDELVKESRHILDQGVKELVLVAQDVTAWGRDLPNNYG----------LKTLLDHLLV 220 Query: 229 LGIWTRLHYVYPYP---HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 L RL +Y YP D ++ L + G+ +PY D+P+QHA P IL M RP + + + Sbjct: 221 LDGLKRLRLMYLYPTGLTKDFLLYLKSVGEPFVPYFDVPIQHAHPDILSCMGRPFAKNPR 280 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 I R + PE LR++ I GFPGETE L F++E + +G F Y G A Sbjct: 281 KV-IDNIRSVFPEAVLRTSVITGFPGETEGHHVYLSKFIEEIKFQHLGIFSYVAEAGTPA 339 Query: 345 NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMA 401 +P+QV E+VKE+R M++Q +IS + L+ VG+ + +I+D V E GR+ Sbjct: 340 AVMPNQVGEKVKEQRKAELMEIQLKISEKWLKNFVGKRLSLIVDNVHPEWPELYTGRAWF 399 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 APE+DG VY++G N+KPG+++ + + YDL Sbjct: 400 QAPEVDGMVYISG-PNIKPGELIEADIMESHSYDL 433 >UniRef50_C7MNG6 MiaB-like tRNA modifying enzyme YliG, TIGR01125 n=4 Tax=Coriobacteriaceae RepID=C7MNG6_CRYCD Length = 477 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 151/444 (34%), Positives = 239/444 (53%), Gaps = 27/444 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P +++GC KN VDS ++ +L+ G+ V+ AD++IVNTC FI +A +ESLE I Sbjct: 44 PNACIITMGCAKNEVDSAKMRGQLQEGGWSVINDPTAADVIIVNTCSFIQAATEESLETI 103 Query: 68 GEALN------ENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 E + K++V GC+ A+ D + + + + +L V + +P Sbjct: 104 FEVADLKRVRSGQAKIVVAGCMPARYGDDLSDSLTEASRFVPCSKEDDILSVVDELIDRP 163 Query: 121 K--HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 K + P S +P P + AY+KIS+GC+ C++C IP +RG S + +E Sbjct: 164 KSSYAPGASSIPVVASS-DPLYSAYVKISDGCDRFCSYCTIPFIRGRYHSFTFEVIEAEV 222 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLH 236 R +D+G +EI++I+QDT +G D +++ L +L++L W R+ Sbjct: 223 TRCIDSGAREIVLIAQDTGRWGQDFDQ----------PSTLACLMARLAELHPDTWFRVM 272 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y+ P D+++ MA I YLDIP QHA R+L M R GS I+ R Sbjct: 273 YLQPEGVTDELLAAMASHDNICSYLDIPFQHADERLLTSMNRRGSRAGYQTLIEHVRSCV 332 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P +TLR+T I G+PGE +EDF+ +L+F+ EA LD VG F YS EG A L DQV E + Sbjct: 333 PGITLRTTMIAGYPGERDEDFEEMLEFIDEADLDYVGVFAYSQEEGTRAARLSDQVDEAI 392 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAVYLNG 414 K+ER R + S R+ +++G + V++ +E+G IGR+ AP++DG VYL+ Sbjct: 393 KQERAQRLRDVADAHSQMRVAKRIGSTMDVLVLGCEEDGRLIGRAQCQAPDVDGVVYLD- 451 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 + + G+I++V + Y++ G Sbjct: 452 --HGQVGEIVQVDITDTFLYEMEG 473 >UniRef50_D2AXY5 RNA modification enzyme, MiaB-family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AXY5_STRRD Length = 469 Score = 247 bits (630), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 154/464 (33%), Positives = 246/464 (53%), Gaps = 50/464 (10%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 ++LGC +N VDSE + L G+ V DD D+++VNTCGFIDSA ++S++ + A Sbjct: 9 LITLGCARNEVDSEELAARLEAAGWQV--GDDDPDVIVVNTCGFIDSAKKDSIDTLLAAA 66 Query: 72 NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQV---LEHVHHYVPKPKHNP--- 124 + KV+ GC+ + DQ+ + P+ + Y Q+ L+ V P H+P Sbjct: 67 DSGAKVVAAGCMAERYGDQLADALPEAAAVISFDDYTQIGTRLDDVLEGKPLVPHSPRDR 126 Query: 125 --FL-----------------------SLVPEQG-----VKLTPRHYAYLKISEGCNHRC 154 L L P G +L A LK++ GC+ RC Sbjct: 127 RTLLPISPVERAAAPKANIPGHGELPDGLAPASGPRPLRKRLGDGPVASLKLASGCDRRC 186 Query: 155 TFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEP 214 TFC IP+ RG VSR E++SEA L GVKE++++S+++++YG D+ P Sbjct: 187 TFCAIPAFRGAYVSRSPEELVSEAAWLAGQGVKELVLVSENSTSYGKDLGDLRALEKLLP 246 Query: 215 VKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILK 273 ++ E + ++ R+ Y+ P ++ ++A + + PY D+ QHAS +L+ Sbjct: 247 ----SLAATEGIERV----RVSYLQPAELRPGLLEMIASTESVAPYFDLSFQHASGSVLR 298 Query: 274 LMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGC 333 M+R G R L ++ R PE +RS FIVGFPGETEE+F L FL+EARLD +G Sbjct: 299 RMRRFGDPRRFLDLLESVRATAPEAGVRSNFIVGFPGETEEEFAELTAFLQEARLDVIGV 358 Query: 334 FKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE-VDE 392 F YS +G +A +LP ++ +E + R +L +++ A+R +E++G E+ V+I+E + + Sbjct: 359 FGYSDEDGTEAASLPGKLDQETVDARVAALTELAEELMAQRAEERIGTEVDVLIEEDLGD 418 Query: 393 EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 G GR+ PE+DG+V + G + PG I+R V ++ DL Sbjct: 419 GGYEGRAAHQGPEVDGSVTVQG-IGLVPGQIVRAVVVDSEGVDL 461 >UniRef50_A8ERB7 Ribosomal protein S12 methylthiotransferase rimO n=31 Tax=Epsilonproteobacteria RepID=RIMO_ARCB4 Length = 446 Score = 247 bits (630), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 158/445 (35%), Positives = 243/445 (54%), Gaps = 32/445 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 S P+ + VSLGC KNLVDSE +L R Y + +AD++IVNTCGFIDSA Sbjct: 3 FSTQKPKKTLHMVSLGCTKNLVDSEVMLG--RLSDYQLTDDAQNADVIIVNTCGFIDSAK 60 Query: 61 QESLEAIGEALNENGK----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHH 115 QES+ I +L+E+ K +++ GCL + ++++++ P++ TG Y+++ E V+ Sbjct: 61 QESINTIL-SLHEDRKNESVLVMAGCLSERYKEELQKELPEIDVFTGVGDYDRIDELVNE 119 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 FL+ + V ++AY+K+SEGCN C+FC IPS +G L SR + ++ Sbjct: 120 KRSNFTSEVFLASETNERVITGSSYHAYVKLSEGCNQACSFCAIPSFKGKLHSRTLQSLV 179 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GIWT- 233 E K LV G + +SQD+S++ D+ +K + L E++ K+ GI T Sbjct: 180 KEVKALVAKGYVDFSFVSQDSSSFLRDL----------DIKNGLELLVEEVEKIEGIKTA 229 Query: 234 RLHYVYPYPHVDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R+ Y+YP +I +A+ K+ Y D+PLQH +P +LK+MKR V+ QL + Sbjct: 230 RILYLYPSTTTLSLIDKIADSKVFVNYFDMPLQHITPSMLKIMKRGKGVE-QLNELMNHM 288 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P +R+TFI G PGETE+DF+ L ++++ + DR F YS EG A D+V Sbjct: 289 KSKPNSFVRTTFIAGHPGETEDDFEALCNYVENFKFDRANVFSYSDEEGTTAETRTDKVE 348 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGA 409 +E+ +ER ++ Q + E L+ +VG+ V ID EE R AP IDG Sbjct: 349 QELIDERAEVLGEIISQTTQESLESEVGKTFEVYIDGESEEHEYLLSARKTIWAPSIDGE 408 Query: 410 VYLN------GETNVKPGDILRVKV 428 +Y+N GE +K G I VK+ Sbjct: 409 IYINDNELSEGE-QIKFGQIYTVKI 432 >UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6X2_ATOPD Length = 468 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 156/444 (35%), Positives = 238/444 (53%), Gaps = 19/444 (4%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA---IG 68 +++LGC KN VD++R+ L G+ V + AD+ I+NTC F+ SA +ES+E I Sbjct: 18 YITLGCAKNEVDTDRMRALLLASGFGEVADPESADVAIINTCSFLASATEESIETTLEIA 77 Query: 69 EALNENGK---VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 E +E + +I+ GC+ ++ ++ E P+V + ++ V + P+ P Sbjct: 78 EGASEGVRKLPIIMCGCVPSRYGAELNEQLPEVAAFVPADQEDGIVSIVADVLNIPE--P 135 Query: 125 FLSLVPEQG-VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 S+V G ++ A++KISEGC+ C FC IP +RG SRP E+L E K L+D Sbjct: 136 TQSIVAAHGMLRTIDGASAFVKISEGCDRFCAFCAIPYIRGHYHSRPAEEILQEVKELMD 195 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 GV+E+++I QDT +G D+ K M + E + W R+ Y+ P Sbjct: 196 GGVREVILIGQDTGIWGSDMPDTEDGQTPTLAKL-MQKVAEVVRSYKGWIRVLYLQPEGM 254 Query: 244 VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 D++I + + ++LPY+DIP+QH + RILK M R GS+ + R P + LR+ Sbjct: 255 TDELISTIRDTPEVLPYIDIPIQHCNERILKRMGRSGSIQELRKLFDRLRSEIPGMVLRT 314 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 T + GFPGET+E+ L DF++E D F YSP EG + DQVP+EVK ER R Sbjct: 315 TGMCGFPGETDEESDELYDFIQEQEFDYTSVFTYSPEEGTLGAKMSDQVPDEVKIERTQR 374 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDE--EGA--IGRSMADAPEIDGAVYL-NGETN 417 + L +Q+ VG VIID ++E EG IG + AP+ DGAV++ GE + Sbjct: 375 LLDLVEQLGFAATARHVGERCEVIIDGIEESDEGTELIGHTWFQAPDCDGAVHIAEGEAS 434 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 V GDI+ + + Y++ G V Sbjct: 435 V--GDIVLCDLVDSFCYEMIGEIV 456 >UniRef50_D1B785 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B785_THEAS Length = 427 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 153/442 (34%), Positives = 239/442 (54%), Gaps = 38/442 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ +SLGC KN VD ER L GY V AD+ I+NTCGF+ SAV+E+L+AI Sbjct: 4 KVYVLSLGCAKNRVDGERFLGVALERGYVQVHEPQGADLCIINTCGFLMSAVKENLDAIL 63 Query: 69 EALNEN-----GKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 EA G + V GCL + E+ RE+ L T Y ++ E + P+ Sbjct: 64 EAEELRRRGLIGSLAVVGCLVNRYEEELRRELQVDFLGRT--ECYRELGEFLGGASEGPR 121 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 P G ++ YLK++EGC++RC +C IP +RGDL S P+ ++ EA+ L Sbjct: 122 R-------PLGGSEVVR----YLKVAEGCSNRCAYCAIPLIRGDLRSLPVAHLVREAELL 170 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL----GIWTRLHY 237 ++ G +EI +++QD + YG E + T ++ L +Q+ G+ RL Y Sbjct: 171 LEQGAREICLVAQDLTRYG------------EDLGTDLMELLDQMEATVRGHGVL-RLLY 217 Query: 238 VYPYPHVDDVIPLMAEGKILP-YLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 ++P +++ +A ++ YLD+P+QHAS R+L M R + + + R++ P Sbjct: 218 LHPTRVTRELVERVASSDVVASYLDVPVQHASDRVLASMGRAMGYEDAVRPFLEARQVDP 277 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +R+T +VG+PGE EDF L+ FL+EAR DRVG F +SP EG A LP +V Sbjct: 278 LFAMRTTLMVGYPGEGREDFDALIRFLEEARPDRVGAFVFSPEEGTQAFQLPRRVSGRTA 337 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 R +R M ++S +R + GRE+ V+++ V++ +GRS +APE+DG++ + Sbjct: 338 RSRLDRLMARAAEVSLDRQRLMEGREVRVLLEAVEDGQWVGRSYREAPEVDGSILIPEGE 397 Query: 417 NVKPGDILRVKVEHADEYDLWG 438 ++ G RV +E A E+D G Sbjct: 398 GLRVGGFYRVLLEEALEHDFIG 419 >UniRef50_B9L1I3 MiaB-like tRNA modifying enzyme YliG, TIGR01125 n=2 Tax=Thermomicrobia (class) RepID=B9L1I3_THERP Length = 470 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 168/448 (37%), Positives = 248/448 (55%), Gaps = 30/448 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + V+LGC KN VDSE + L G D+A +++VNTCGF+ +A ES AI Sbjct: 6 RFHIVTLGCSKNQVDSEGMAQRLIARGLQPTDEPDEAAVLVVNTCGFLAAARAESRAAIE 65 Query: 69 E--ALNENGKVIVT-GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP----- 120 E A G++I+ GC+ + + E+ P + H + ++ V + P Sbjct: 66 ELAARRRPGQIIIAAGCMVSLDQHRAELPPGLDAYVPTHDWNRIDAVVADLLGLPIPSVL 125 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + L P V+ R AY+KI++GC+HRC+FC IP ++G+ S+ E++ E + Sbjct: 126 ESTRDLPSFPRLPVR---RPSAYVKIADGCDHRCSFCAIPLIKGNQRSKRPSEIVREIRE 182 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 LV+AG KE+++++QDT YG D+ G NG P + S+ E + L W RL Y+YP Sbjct: 183 LVNAGTKEVILVAQDTIRYGADL----GLRNGLP--DLLRSIAEHVPDLP-WLRLLYLYP 235 Query: 241 YPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 P + +I MAE K +PYLDIPLQHA P +L+ M RP D I RE P++ Sbjct: 236 SPLLFRLIDTMAELKPCVPYLDIPLQHADPVLLRRMMRPSDPDFYRRLIAYARERLPDVA 295 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 LR+TFIVGFPGET+E F+ L DF+ E D VG F YS + + + D VP EV EER Sbjct: 296 LRTTFIVGFPGETDEQFRRLYDFVAEMEFDHVGVFVYSREQPTPSARMEDPVPPEVAEER 355 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEV----DEEG-----AIGRSMADAPEIDGAV 410 M+LQQ+IS R + VG+ + ++++ DE G + GR+ APE+DG V Sbjct: 356 RAALMELQQRISWARNKTLVGKILPILVEGTGEVEDERGNRAPLSAGRAARHAPEVDGLV 415 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 ++ E + G+ + V++ A+ YDLW Sbjct: 416 FVPEELPL--GEFVTVRITQAEPYDLWA 441 >UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKI3_9ACTN Length = 460 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 154/450 (34%), Positives = 244/450 (54%), Gaps = 21/450 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + I FV+LGC KN VD++R+ L +G+ V + ++AD+V++NTC F+ SA +ES+E Sbjct: 12 KKNILFVTLGCAKNEVDTDRMRALLFAQGFSEVDTPNEADIVLINTCSFLASATEESIET 71 Query: 67 ---IGEALNENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 I E + + +++ GC+ ++ ++ E P+V + ++E V V Sbjct: 72 TLQIAEGASHGVRSLPIVMCGCVPSRYGSKLPEELPEVAAFVRADEEDGIVEVVSE-VLG 130 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + P + ++ AY+KIS+GC+ C FC IP +RG SRP E+LSE Sbjct: 131 IERTPQSVIAAHGMLRTVEGASAYVKISDGCDRFCAFCAIPYIRGHYQSRPADEILSEVS 190 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE-PVKTSMVSLCEQLSK-LGIWTRLHY 237 L++ GV+EI++I QDT +G D+ + GE P ++ Q+ + W R+ Y Sbjct: 191 SLMEGGVREIILIGQDTGIWGNDIAET---NTGEVPTLAWLMRQVAQVVRPYNGWVRVLY 247 Query: 238 VYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 + P D++I + + + LPY+DIP+QH S R+L M R GS + + R P Sbjct: 248 LQPEGMTDELISTIRDTPECLPYIDIPIQHCSERVLARMGRSGSAPELRSLFDRLRREIP 307 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + LR+T + GFPGETEE+ L DF++E D F YSP EG ++P+QVP+E+K Sbjct: 308 GMVLRTTGMCGFPGETEEESDELYDFIQEQEFDYTSVFTYSPEEGTAGASMPNQVPDEIK 367 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEG--AIGRSMADAPEIDGAVYL 412 ER R + L +++ VG VIID ++ +EG IG + AP+ DGAV++ Sbjct: 368 MERTQRLIDLVEELGFAGTARHVGERCEVIIDGIEDTDEGFELIGHAWFQAPDCDGAVHI 427 Query: 413 -NGETNVKPGDILRVKVEHADEYDLWGSRV 441 NGE V GDI+ + + Y++ G V Sbjct: 428 ANGEARV--GDIVLCDLVDSFCYEIIGEIV 455 >UniRef50_C0R0S3 MiaB, 2-methylthioadenine synthetase n=2 Tax=Brachyspira RepID=C0R0S3_BRAHW Length = 440 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 160/447 (35%), Positives = 252/447 (56%), Gaps = 37/447 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--AL 71 SLGC KN VD E IL L+ +G+++ + +DAD++++NTC FI+ + +ES++AI + Sbjct: 8 SLGCEKNTVDGEHILAILQKKGFNITNNPEDADIIVINTCAFIEDSKKESIDAIFDHSMY 67 Query: 72 NENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHY-VPKPKHNPFL 126 + GK +IV+GC+ + ++ E+ +V G + E +L+ V K N Sbjct: 68 KKYGKCKRLIVSGCMSERYKENFLEMFKEVDSAIGIYDLENILKAVEEDGFHDAKEN--- 124 Query: 127 SLVPEQG--VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + E G V ++ Y++IS+GC+ C+FC IP +RG+ SR I +++ EA+ Sbjct: 125 TEYKEYGDRVNTGTKYSVYIRISDGCHANCSFCAIPGIRGEHRSRKIEDIVKEAENYAKN 184 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLHYVYPYP 242 G KEI +I+Q+T+ YG D+ K ++ L + LSK+ GI W R+ Y P Sbjct: 185 GAKEINLIAQETTFYGYDIYK----------KLALPDLLKALSKVEGIEWIRVLYQNPVV 234 Query: 243 HVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR--IKQWREICPELT 299 D++I K++PY DIPLQH ILK M R G+ + R I + R + Sbjct: 235 LNDEIIESFFNTEKVVPYFDIPLQHVDKDILKDMNR-GTRSYKFYREMIDKIRSYNNDAV 293 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 +R++ IVGFPGET E F+ L+ F++ A+LDRVG F YS E + AL P+ + ++ Sbjct: 294 IRTSLIVGFPGETAESFKKLIKFVRNAKLDRVGVFTYS--EEENTKALLINKPKMSRNKK 351 Query: 360 W---NRFMQLQQQISAERLQEKVGREILVIIDEV-DEEGAIGRSMADAPEIDGAVYL--- 412 + M+ ++S +RL+ +GR I V+I++ D+ IGRS+ DAPE+DG V + Sbjct: 352 LILREKLMRAAIEVSEKRLERFIGRTIDVLIEKKEDDNKFIGRSIYDAPEVDGYVEVYNE 411 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGS 439 N N+ GDI++V V H EYDL G+ Sbjct: 412 NTNNNINIGDIVQVAVTHNTEYDLIGN 438 >UniRef50_B8DM03 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DM03_DESVM Length = 461 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 167/453 (36%), Positives = 248/453 (54%), Gaps = 35/453 (7%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVP--SYDDADMVIVNTCGFIDSAVQESLEAIGEA 70 VSLGCPKN VD+ER+L L G V P +AD+V+VNTCGFI AV+ES+ + EA Sbjct: 7 VSLGCPKNRVDTERLLGAL---GAPVRPVARMAEADVVLVNTCGFILPAVEESVRTVVEA 63 Query: 71 LNENGKVI------VTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPK 121 ++E + V GCL + E + P+V S E + + V + Sbjct: 64 VDEISGLARRPLLAVAGCLVGRYGERDLAAELPEVDLWLPNQSIETWPDLLARAVGARVA 123 Query: 122 HNPFL----SLVP-------EQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 L +L P G +L T YA+LKIS+GC H C+FC IPS+RG S Sbjct: 124 MGGGLAGSGTLAPGAVAPGYAGGTRLLSTGPSYAWLKISDGCRHNCSFCTIPSIRGAHRS 183 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 P E+ EA++L+D GV+E+++++QD +A+G D+++ G G+ ++ L Sbjct: 184 TPAAELEREARQLLDMGVRELILVAQDVTAWGGDLENGPGGSAGKGDLRPLLDRLLPLPG 243 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 L RL Y+YP DD++ +A +PY D+PLQHA P +L M RP + + ++ Sbjct: 244 LDR-LRLMYLYPAGLNDDLLAYLAAAGAPFVPYFDVPLQHAHPDVLGRMGRPFARNPRVV 302 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R+ P+ LR++ IVGFPGETEE + L DF+ E R +G F Y EG A A Sbjct: 303 -VDRIRKHFPDAALRTSIIVGFPGETEEHYAALTDFVAETRFHHLGVFAYRAEEGTPAAA 361 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADA 403 +P QV ++VKE R + M++Q +IS E ++ VG+ + V++D +E GR+ A Sbjct: 362 MPGQVDDKVKEWRRDALMEVQAEISEEIMESCVGQRLPVLVDAPHDEWPGLHTGRTWFQA 421 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 PEIDG Y++G V PG ++ + A YDL Sbjct: 422 PEIDGVTYVSG-AGVIPGALVEADIVEARTYDL 453 >UniRef50_Q2J750 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Frankia RepID=RIMO_FRASC Length = 523 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 148/448 (33%), Positives = 228/448 (50%), Gaps = 60/448 (13%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI- 67 ++ ++LGC +N VDSE + L +G+++V DAD V+VNTCGF+D+A ++S++A+ Sbjct: 8 RVALITLGCSRNEVDSEELAARLGADGWELVSDAADADAVLVNTCGFVDAAKKDSIDALL 67 Query: 68 -GEALNENG--------------KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLE 111 + L G V+ GCL + ++ E P+ + G +Y + Sbjct: 68 AADGLRAGGGPSGPADGAGPGPRAVVAVGCLAERYGTELAESLPEADAVLGFDAYPNIAT 127 Query: 112 HVHHYV---PKPKHNP-----FLSLVP-------------EQGV-----KLTPRHYAYLK 145 H+ + P P H+P L + P G +LT A LK Sbjct: 128 HLAAVLAGTPVPAHSPRDRRTMLPITPVDRAAPALPPAAVSTGAVPLRRRLTAGPVAVLK 187 Query: 146 ISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKH 205 IS GC+ RC FC IPS RG VSR +VL+EA+ L G +E++++S+++++YG D+ Sbjct: 188 ISSGCDRRCAFCAIPSFRGSHVSRSPDDVLAEAEWLAGQGARELVLVSENSTSYGKDLGD 247 Query: 206 RTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIP-----LMAEGKILPYL 260 L QL+ + R+ VY P ++ P L+ + PYL Sbjct: 248 LRALEK----------LLPQLAAVSGIVRVRTVYLQPA--EMRPSLLEVLLTTPGLAPYL 295 Query: 261 DIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLL 320 D+ QHASP +L+ M+R G L + + R + PEL RS IVGFPGET ED +L Sbjct: 296 DLSFQHASPPVLRRMRRFGGSGHFLDLLARARALAPELGARSNVIVGFPGETPEDVDILA 355 Query: 321 DFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVG 380 +FL+ A LD VG F YS EG +A L D++P+E+ E R R L +Q++A R ++G Sbjct: 356 EFLEAAELDAVGVFGYSDEEGTEAAGLTDKIPDELIERRRVRVTDLVEQLTAARADARIG 415 Query: 381 REILVIIDEVDEEGAIGRSMADAPEIDG 408 + V+++EV A G + E+DG Sbjct: 416 SRVQVLVEEVAGGLATGCAAHQQAEVDG 443 >UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC80_9ACTN Length = 449 Score = 236 bits (603), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 151/448 (33%), Positives = 238/448 (53%), Gaps = 19/448 (4%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 TP + +++LGC KN VD++R+ + L GY+ DAD+ IVNTC F+ SA ES+ Sbjct: 3 TPLGSVLYITLGCAKNEVDTDRMRSLLTAAGYEEAFDPQDADIAIVNTCSFLASATSESI 62 Query: 65 EAIGEALNE------NGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 E E NE + +++ GC+ ++ D + + P+V + ++ + + Sbjct: 63 ETTLELANEVQDGVRSCPIVMCGCVPSRYGDDLPDELPEVAAFVKADEEDGIVAVIDGVL 122 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + +P Q + AY+KIS+GCN C+FC+IP +RG SR ++SE Sbjct: 123 GVERE--IAAYIP-QVKRTVEGAVAYVKISDGCNRFCSFCMIPYIRGRYHSRNSESIISE 179 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV--SLCEQLSKLGIWTRL 235 + LV GV+EI++I QDT +G D +G P + + ++ E + +W R+ Sbjct: 180 VRDLVAGGVREIVLIGQDTGIWGTDFADED-VADGSPRNLAQLLRAVAEAVRPHNVWVRV 238 Query: 236 HYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+ P D++I + + ++LPY+DIP+QH RILK M+R GS + RE Sbjct: 239 LYLQPEGMTDELIDTIRDTPEVLPYIDIPVQHCDARILKAMRRSGSRQELEDLFRDLRER 298 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + +RST +VGFP ET+++F+ L+DF+ D F YS EG+ A + QV EE Sbjct: 299 IPGIVIRSTAMVGFPTETDDEFRDLIDFMDTVGFDYTSVFAYSREEGSLAAKMEGQVDEE 358 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGA--IGRSMADAPEIDGAV 410 VK ER M L + + VG VI+D ++ E+GA IG + AP+ DGAV Sbjct: 359 VKLERAQEAMDLAESLGFAATAAHVGERAQVIVDGIEETEDGAELIGHAWFQAPDSDGAV 418 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 +L+ + GDIL V+ + Y+L G Sbjct: 419 HLDA-SEASVGDILTVEFTDSFCYELIG 445 >UniRef50_Q726F7 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Desulfovibrionales RepID=RIMO_DESVH Length = 430 Score = 231 bits (589), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 160/445 (35%), Positives = 236/445 (53%), Gaps = 46/445 (10%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVP--SYDDADMVIVNTCGFIDSAVQESLEAIGEA 70 +SLGCPKN VD+E +L L G V P AD+V++NTCGFI AV+ES+ I E Sbjct: 7 ISLGCPKNRVDTEHLLGSL---GVAVQPVEHLSRADVVLINTCGFILPAVEESVRTIVET 63 Query: 71 LNENGKV------IVTGCL----GAKEDQIREVHPKVLEITGPH----SYEQVLEHVHHY 116 +++ + V GCL GAKE + P+V ++ P+ ++ +L H Sbjct: 64 IDDLSGLRKRPLLAVAGCLVGRYGAKE--LASELPEV-DVWLPNQDITAWPAMLAHALKL 120 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 LS P YA+LKIS+GC H C+FC IPS+RG S P + Sbjct: 121 EGAVTPGRLLSTGPS---------YAWLKISDGCRHNCSFCTIPSIRGGHRSTPADVLER 171 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 EA+ LV GV+E+++++QD +A+G D+ G +G + L++L RL Sbjct: 172 EARDLVAQGVRELVLVAQDVTAWGEDI----GAPHGLATLLERLLPVPGLARL----RLM 223 Query: 237 YVYPYPHVDDVIPLM--AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+YP +++ M A ++PY D+PLQHA P IL M RP + D + +++ R+ Sbjct: 224 YLYPAGLTRELLGFMRDAGAPLVPYFDVPLQHAHPDILSRMGRPFARDPRRV-VERVRDF 282 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P+ LR++ IVGFPGET+E + L F++E R +G F Y EG A +P+QV + Sbjct: 283 FPDAALRTSLIVGFPGETDEHYAALTSFVEETRFTHMGVFAYRAEEGTPAAEMPEQVEDR 342 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVY 411 VKE R + M++Q +IS E L G V++D EE GR+ APEIDG Y Sbjct: 343 VKEWRRDALMEVQAEISEELLAVHEGTRQQVLVDAPHEEWPGLHTGRTWFQAPEIDGITY 402 Query: 412 LNGETNVKPGDILRVKVEHADEYDL 436 ++G V+PG ++ + YDL Sbjct: 403 VSG-PGVEPGALVEADIVETRTYDL 426 >UniRef50_C1SNN4 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNN4_9BACT Length = 435 Score = 230 bits (587), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 148/417 (35%), Positives = 225/417 (53%), Gaps = 32/417 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI- 67 K+ F+SLGC KN VD E ++ + G+ + +++D +IVNTCGFI+ AV E+++ I Sbjct: 5 KVSFISLGCSKNQVDLEYLMGAIEKAGFQITNIPEESDAIIVNTCGFIEPAVAEAIDNIL 64 Query: 68 --GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 GE K+IVTGC+ + D+++ P+V TG ++V+ ++ Sbjct: 65 EMGERRKAGAKLIVTGCMSERYSDEMKTEFPEVDYFTGVGDLQKVVGYLLEDD------- 117 Query: 125 FLSLVPEQG---VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 S VP+ G + ++AYLK+SEGC++RC++C IP +RG LVSR + +++ EA+ L Sbjct: 118 --SAVPDYGDARILANEHYFAYLKVSEGCDNRCSYCAIPGIRGGLVSRKMEDIVKEAESL 175 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVY 239 VD GVKE++VISQD + YG D+ G+P SM L ++L + R+ Y+ Sbjct: 176 VDGGVKELIVISQDNTKYGKDI-------YGKP---SMPELLKKLEGIEGDFKIRIMYLN 225 Query: 240 PYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P ++I ++ KIL Y DIP+QH S ++LK MKR R+ PE Sbjct: 226 PDGVTQELIDVICGSKKILSYFDIPVQHYSDKMLKAMKRKSDSSIIDDVYDSIRKADPES 285 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 +R+T IVGFPGETE DF L FL + D G F Y +G A L V + Sbjct: 286 FIRTTMIVGFPGETEGDFAELEKFLTRHKPDFAGFFPYYREKGTSAYELGASVGKRETNR 345 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIID-EVDEEGAI--GRSMADAPEIDGAVYL 412 R ++Q+ + RL+ +I+ ++ E D+ I GR++ APEIDG Y Sbjct: 346 RIRALQKIQKTNTNNRLKMLKKNDIICFVEGESDQSELILQGRALFQAPEIDGKAYF 402 >UniRef50_A0LV11 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Acidothermus cellulolyticus 11B RepID=RIMO_ACIC1 Length = 475 Score = 230 bits (586), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 153/471 (32%), Positives = 241/471 (51%), Gaps = 60/471 (12%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 + LGC +N VD+E + L G+ + + AD+ +VNTCGFI++A QES++ + EA Sbjct: 9 LIRLGCARNDVDAEELAARLVDAGWRLTEA-PSADVTVVNTCGFIEAAKQESIDTLLEAA 67 Query: 72 NENGKVIVTGCLG-----AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP-- 124 + + +V+ GCL A D + E +L Q LE V P H P Sbjct: 68 DGSTRVVAVGCLAERYGAALADAMPEA--TILSFDDYPVIAQRLEDVLAGRPPAPHTPRD 125 Query: 125 ---FLSLVP--------EQGV------------KLTPRHYAYLKISEGCNHRCTFCIIPS 161 L L P E G+ +L A LKI+ GC+ RCTFC IPS Sbjct: 126 RRTLLPLTPVDRPRAAAEVGIPGHLGGPRVLRHRLDDSPVAPLKIASGCDRRCTFCAIPS 185 Query: 162 MRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVS 221 RG VSRP ++L EA+ L D G +EI+++S+++++YG D+ G+P + Sbjct: 186 FRGAFVSRPPADILREAQWLADHGAREIVLVSENSTSYGKDL--------GDPF-----A 232 Query: 222 LCEQLSKLG-----IWTRLHYVYPY---PHVDDVIPLMAEGKILPYLDIPLQHASPRILK 273 L + L+ G + R+ Y+ P P + DVI + PY D+ QHASPR+L+ Sbjct: 233 LEKLLAAFGGVDGLVRVRVTYLQPAEVRPALIDVIATAPH--VAPYFDLSFQHASPRVLR 290 Query: 274 LMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGC 333 M+R G + L + + R P +RS IVGFPGETEED L +FL+ ARLD +G Sbjct: 291 RMRRFGGSEEFLNLLAEIRRRNPRAAVRSNVIVGFPGETEEDVAELGEFLRAARLDGIGV 350 Query: 334 FKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE- 392 F YS +G +A+ P+++PE+ R + + ++++A+R + ++G + V+ID VD+ Sbjct: 351 FGYSDEDGTEASGFPEKIPEQEIRSRVDDIAGIAEEVTADRARARLGETVDVLIDGVDDD 410 Query: 393 --EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + G + A ++DG L + + G ++R ++ D D + V Sbjct: 411 RPDACYGYTEVQAVDVDGVTVLR-DCSAARGALVRAEIVEIDGVDFLAAPV 460 >UniRef50_A8J945 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J945_CHLRE Length = 420 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 154/443 (34%), Positives = 232/443 (52%), Gaps = 47/443 (10%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA- 70 V+LGCPKN+VD E +L +L G++V ++++D +IVNTC F++ A ESLEAI EA Sbjct: 1 LVALGCPKNVVDGEVLLGDLARAGFEVTDDHEESDAIIVNTCAFVEDAKSESLEAIVEAA 60 Query: 71 -LNENG---KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 LNE+G K++VTGCL + Q+ P+ + G SY N Sbjct: 61 SLNEDGRRRKLVVTGCLAQRYSSQLAADLPEADLVVGFQSY---------------GNLA 105 Query: 126 LSLVPEQGVKLTPRHYA------YLKISEGCNHRCTFCIIPSMRGDLVSRP--IGEVLSE 177 SL G+++TP A YL+++EGCNH CTFC IP R ++ P + + + Sbjct: 106 ASLQKSMGMEVTPEALAIAEASAYLRVAEGCNHACTFCAIPGFRCPTLTCPTDLSRLQAH 165 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRL 235 ++ T A + R G + L +L KL G+ W R+ Sbjct: 166 THTHTHTSFTHAHIVHTHTHA-----RRRDG--------RDLAQLLRELGKLEGLRWIRI 212 Query: 236 HYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP D++I +A K+ YLD+PLQH + L M RP + + + RE Sbjct: 213 LYAYPSYFNDELIDEIANNPKVCKYLDMPLQHIANLTLLAMNRPPK-EHTTKLLAKLRER 271 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P L LR+TFI GFPGE++E + L+DF+K + +R+GCF +S +G A +P+QVP Sbjct: 272 IPGLALRTTFISGFPGESDEQHRELVDFVKTFKFERMGCFAFSEEDGTPAATMPEQVPRR 331 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLN 413 +E R + + LQQ+I E + VGRE+ V+++ +++G IGR+ DAP++D V+L Sbjct: 332 QRERRRDELISLQQRIGEEWAEGLVGREVDVLVEGYNDDGWLIGRTQWDAPDVDPLVFLT 391 Query: 414 GETNVKPGDILRVKVEHADEYDL 436 + G I R V +DL Sbjct: 392 EAEDESVGSIRRCLVTSNSLFDL 414 >UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Treponema denticola RepID=RIMO_TREDE Length = 467 Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 153/461 (33%), Positives = 239/461 (51%), Gaps = 43/461 (9%) Query: 16 GCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI--GEALNE 73 GC KN VD+E I+ + + D+AD++IVN+CGFI+SA +ES+ A+ +A + Sbjct: 5 GCAKNQVDAELIIGIMENLSWKNTSDPDEADLIIVNSCGFINSAKEESINAVLQAKAAHP 64 Query: 74 NGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN-PFL--SLV 129 KV++ GCL + D ++ P+ I G + + + + PK + F+ +LV Sbjct: 65 KAKVLLAGCLAERYADILKNDLPEADGIFGNGNLSLLPQLIDSMFPKKTSDEKFIEKTLV 124 Query: 130 PEQ---------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P Q + PR Y+KI+EGC++ C+FC IP +RG L SRPI ++ E K Sbjct: 125 PPQIGICGGERPKILNFPRS-TYIKITEGCDNFCSFCAIPIIRGRLRSRPIKDICDEIKT 183 Query: 181 LVDAGVKEILVISQDTSAY--GVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLH 236 + E +I QD +AY G D H + + L + +SK+ RL Sbjct: 184 FLKKSFYEFNLIGQDLAAYQTGKDDLSEDELHRENC--SGLALLLKSISKIKGNFKIRLL 241 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y++P D++P+M A+ + LPY DIP Q + +I++ M R G+ + L IK RE Sbjct: 242 YIHPDHFPLDILPIMTADKRFLPYFDIPFQSGAQKIIRAMNRNGAAEVYLDIIKNIREAF 301 Query: 296 P-------ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 E +R+TF+VGFPGET+EDF + FLKE R G F YS E + + Sbjct: 302 EKTNSPYGEPQIRTTFLVGFPGETDEDFNETIKFLKELRPLWSGGFTYSREEDTPSYSFK 361 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-----AIGRSMADA 403 +VP++ E R Q I+ ++L +G+EI V+++E+ + A+GR+ A Sbjct: 362 GKVPKKTAEARLAEIQNAQTSITEKKLDSFIGKEIEVLVEELIQAEDKTFLALGRAWFQA 421 Query: 404 PEIDGAVYLNGETNVK--------PGDILRVKVEHADEYDL 436 PE+DGAV LN N K PG I++ ++ + +DL Sbjct: 422 PEVDGAVVLNFNLNKKDIDGNPIAPGSIVKARIAARNGFDL 462 >UniRef50_C9RIJ5 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIJ5_FIBSS Length = 449 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 149/419 (35%), Positives = 231/419 (55%), Gaps = 28/419 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T +PK+ V LGC KN VD+E ++ E+ G+ + AD ++VNTCGFI++A +ES+ Sbjct: 15 TKKPKVFVVHLGCAKNQVDAENLVGEMLHAGFATCDTAGKADYILVNTCGFIEAAKEESI 74 Query: 65 EAIGEALNENGKVI---VTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 AI V+GCL + E+ ++E+ P+V G + ++L+ + P+ Sbjct: 75 NAILAQAKAKKAKQKLIVSGCLSGRYGEELMKEL-PEVDYWVGTYKPGELLKKMGIVAPQ 133 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 L + G H+AYLKI+EGCN RC +C IP +RG SR I ++++EAK Sbjct: 134 SCDAENLPRMNLGGFS----HHAYLKIAEGCNRRCAYCAIPLIRGKQDSRSIEDIVAEAK 189 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL-SKLGI-WTRLHY 237 L GVKEI +I+QDT+ +G + + G ++V L L I W R+ Y Sbjct: 190 DLEAQGVKEITLIAQDTTYFGREKGKKGG---------TLVELLRALLDNTNIPWIRMLY 240 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D+++ LMA E +++ Y+D+P+QHAS ++LK MKR + + + RE P Sbjct: 241 WYPMFVDDELLDLMAKEPRLVKYVDMPIQHASDKMLKNMKRNYRKKELVDLLHKIRERIP 300 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA--LPDQVPEE 354 +TLRST +VGFPGET EDF+ L++ L++ + D +G F +SP EG LP V E Sbjct: 301 GVTLRSTVLVGFPGETHEDFEELMELLQDVQFDHLGGFVFSPEEGTPVMEMDLP-AVDES 359 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAV 410 R Q++++AE + +G+ + +IID+V EE GR+ ++ E D V Sbjct: 360 DARARLEAVTDYQEELAAEYAENMIGKTVKIIIDQVAEESEYHFYGRTEGNSMENDDIV 418 >UniRef50_B0SGD8 Ribosomal protein S12 methylthiotransferase rimO n=7 Tax=Leptospira RepID=RIMO_LEPBA Length = 448 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 147/455 (32%), Positives = 234/455 (51%), Gaps = 26/455 (5%) Query: 1 MSKVTPQPKIGFVS-LGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 + PK F++ LGCPKN VDS + L EG + +D +VNTC FI A Sbjct: 5 LENTNETPKSFFITTLGCPKNTVDSMAMHQSLLKEGLLPAAGPEASDFHLVNTCTFIQDA 64 Query: 60 VQESLEAIGEALN----ENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 +E+++ I ++++ K++V GC + +I + P+V G Y++ E + Sbjct: 65 TKETIQTILDSIDIKKQNKQKLVVVGCFAERAGKEISDDLPEVDLHFGTGKYDKAGEILR 124 Query: 115 HYVP-------KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 P + + L +G++ + Y+Y+KIS+GCN C FCIIP++RG Sbjct: 125 KNFPLEFKDLTEFNEDLLERLTTSKGIENYSKPYSYVKISDGCNRGCHFCIIPNLRGKYR 184 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 +VL + K V AG KEI ++SQDT YG D V+ E L Sbjct: 185 DTDSNDVLEQTKLAVKAGSKEICLVSQDTVFYGKDTDKLMDL-------VRSVAAVEGLE 237 Query: 228 KLGIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 L RL Y+YP + ++ L E KI PYL+ PLQH S +LK M R G + + Sbjct: 238 IL----RLLYLYPDKKTEKLLDLYREIPKIAPYLESPLQHVSKSVLKSMNRTGDYEFFKS 293 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 ++ R+I P+L +R++FI+GFPGET ED + ++ F+++ + ++V F YSP EG Sbjct: 294 LFQKARDIRPDLEIRTSFILGFPGETMEDVEEIIRFVEDVKPEKVNLFPYSPQEGTKGAT 353 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 + Q+ ++ R N + Q ++G+ ++DEV ++GAI R + DAPEI Sbjct: 354 MDGQLKDKEIARRVNLVREAYLGTLKTIHQNRIGKIYPCVVDEVLDDGAIVRRLQDAPEI 413 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 D VY+ + ++K G +V+V+ E D+ G+ V Sbjct: 414 DEVVYVETK-DLKLGQFGKVRVDSFYELDMSGTWV 447 >UniRef50_Q0RDV0 Ribosomal protein S12 methylthiotransferase rimO n=43 Tax=Actinomycetales RepID=RIMO_FRAAA Length = 545 Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 152/466 (32%), Positives = 238/466 (51%), Gaps = 66/466 (14%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 MS P+ ++ V+LGC +N VDSE + L +G+++V DAD V+VNTCGF+D+A Sbjct: 1 MSTHVPR-RVALVTLGCSRNEVDSEELAGRLAAQGWELVADAADADAVLVNTCGFVDAAK 59 Query: 61 QESLEAI----------GEALNENGKVIVT-GCLGAK-EDQIREVHPKVLEITGPHSYEQ 108 ++S++A+ GE + +V GCL + +++ P+ + G +Y Sbjct: 60 KDSIDALLAADDLRAGDGEPAGAGPRAVVAVGCLAERYGNELAASLPEADAVLGFDAYPS 119 Query: 109 VLEHVHHYVPK---PKHNP-----FLSLVP-EQGV------------------------- 134 + EH+ + P H P L + P E+G Sbjct: 120 IGEHLDAVLGGATVPAHTPRDRRTLLPITPVERGASANVAVHVPGHARGVAGGSAAGSPG 179 Query: 135 --KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVI 192 +LT A LKIS GC+ RC FC IPS RG VSRP +VL+EA+ L G +E++++ Sbjct: 180 RRRLTAGPVAALKISSGCDRRCAFCAIPSFRGSHVSRPADDVLAEAEWLAGEGARELVLV 239 Query: 193 SQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIP--- 249 S+++++YG D+ L QL+ + R+ VY P ++ P Sbjct: 240 SENSTSYGKDLGDLRALEK----------LLPQLAAVPGIVRVRTVYLQPA--ELRPSLL 287 Query: 250 --LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVG 307 L+ + PYLD+ QHASP +L+ M+R G + L + + R + P L RS IVG Sbjct: 288 EVLLTTPGLAPYLDLSFQHASPAVLRRMRRFGGSEHFLDLLDRGRGLLPGLGARSNVIVG 347 Query: 308 FPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQ 367 FPGETE D +L +FL+ A LD VG F YS EG +A +LP ++ EE E R + L Sbjct: 348 FPGETEADVDILAEFLEAAELDAVGVFGYSDEEGTEAVSLPGKIAEEEIERRRVQITDLV 407 Query: 368 QQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 +Q++A R QE++G + V+++E+ + A G + P+ DG+ + Sbjct: 408 EQLTATRAQERIGSRVQVLVEEITDGIAAGCAGHQQPDADGSCLVR 453 >UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6E2_9ACTN Length = 504 Score = 221 bits (562), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 150/481 (31%), Positives = 237/481 (49%), Gaps = 44/481 (9%) Query: 2 SKVTPQPKIG--FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 S + QPK FV+LGC KN VD++R+ L G++ AD+VI+NTC F++SA Sbjct: 27 SNASKQPKASCLFVTLGCAKNQVDTDRMRALLLKSGFEESRDASSADVVIINTCSFLESA 86 Query: 60 VQESLEAIGEALNENGK------VIVTGCL----GAKEDQIREVHPKVLEITGPHSYEQV 109 ES+E + + +I+ GC+ GA D+ ++ T S + Sbjct: 87 TSESIEVTLDLAQKRTSGITKLPIIMCGCVPSRYGAALDKELPEVSAFVKATDEDSIVGI 146 Query: 110 LEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + V + P + F + + ++ A++KISEGC+ C FC IP +RG SR Sbjct: 147 VSDVLG-IEHPTFS-FSQELSARALRTIEGTSAFVKISEGCDRYCAFCAIPFIRGHYASR 204 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHR------------------TGFHN 211 E+ SE L++ GVKEI++I QDT +G D R + F Sbjct: 205 CPEEIFSEITMLMEGGVKEIILIGQDTGIWGEDFSSRGAASVLHKDSDLHDPSSASSFDK 264 Query: 212 GEPVKTSM--VSLCEQLSKL----GIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPL 264 SM L +++++ W R+ Y+ P +D+I + + ++LPY+DIP+ Sbjct: 265 NSTQHESMNLAWLLREVARIVRPYKAWIRVLYLQPEGMTEDLIATIRDTPEVLPYIDIPI 324 Query: 265 QHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLK 324 QH + R+LK M R GS + R P++ LR+T +VGFP ET+E+ L+DF K Sbjct: 325 QHCNERLLKKMGRSGSASQLHKLFAHLRHEIPQMVLRTTGMVGFPTETDEEAAELVDFFK 384 Query: 325 EARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREIL 384 + D + F YS G A + Q+ E K ER +++ + VG + Sbjct: 385 QEEFDYMSVFSYSQELGTTAAKMRGQISAETKIERTQTLRDTAEELGFAATAKHVGEVVD 444 Query: 385 VIIDEVD----EEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 VIID +D ++ IG + AP+ DG V++ +T+ PGD++RVK++ A Y+L G Sbjct: 445 VIIDSIDMDSPDKERIGHAWFQAPDCDGCVHIL-DTDANPGDVVRVKLKEAYCYELVGEL 503 Query: 441 V 441 V Sbjct: 504 V 504 >UniRef50_A7H5G3 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Epsilonproteobacteria RepID=RIMO_CAMJD Length = 439 Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 144/417 (34%), Positives = 229/417 (54%), Gaps = 26/417 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ +SLGC KNLVDSE +L R Y++ AD++IVNTCGFIDSA +ES+ AI Sbjct: 2 SKLYLMSLGCNKNLVDSEIMLG--RLSAYELCDEPSKADVLIVNTCGFIDSAKKESINAI 59 Query: 68 ---GEALNENGKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E ++ ++VTGCL + E+ ++E+ P+V TG YE++ E + + Sbjct: 60 LDLHEQRKKDSLLVVTGCLMQRYREELMKEL-PEVDLFTGVGDYERIDEMILKKTNLFSN 118 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + +L + + +A++KI+EGCN +C+FC IPS +G L SR I +++E K LV Sbjct: 119 STYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKGRLKSRQINSIIAELKDLV 178 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLHYVYP 240 G K+ I+QDTS+Y D + G ++ L +++ K+ GI R+ Y+YP Sbjct: 179 ARGYKDFSFIAQDTSSYLFDKGEKDG----------LIRLIDEVEKIKGIRAARILYLYP 228 Query: 241 YPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 + +I ++A + Y D+PLQH S +LK+MKR G+ +L + + P Sbjct: 229 TSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKR-GTNSTRLKEMLNLMKSAPNSF 287 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 LR+ FIVG PGE+E DF+ L +F+K+ DRV F YS E A + +QVP +V +R Sbjct: 288 LRTGFIVGHPGESEADFEKLCEFVKDFGFDRVSVFAYSKEEDTAAFDM-EQVPFKVINKR 346 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADA---PEIDGAVYLN 413 ++ ++ + +++V ++ LV+ EG + D EIDG + +N Sbjct: 347 LKIIEKIVDEVIEKSFEKEVEQKRLVVCTGESSEGEFFIAAKDLRWDREIDGEILIN 403 >UniRef50_B1GZH1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RIMO_UNCTG Length = 439 Score = 217 bits (553), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 139/446 (31%), Positives = 233/446 (52%), Gaps = 38/446 (8%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 I ++LGCPKN V++E +L + +G+ + + D AD+V+++TC FI +A ES + I Sbjct: 9 IAVIALGCPKNTVEAEYLLGIFQEKGFKISSNLDKADIVVIHTCSFIKAAKAESEKCIRT 68 Query: 70 ALN----ENGKVIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 L+ ++ +V V+GCL ++++ + P + G + L+++ V Sbjct: 69 ILDIKKKKSLRVYVSGCLPQLLKEKMSVLFPDIDGFAGTGT----LQYLPDLVFGKNFGR 124 Query: 125 FLSLVPEQGVKLTPRHY---------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 F ++P G L +Y AYLKI+EGC H C+FCIIP++RG SR + ++ Sbjct: 125 F--ILPPGG--LNDSNYRVLSSTIPSAYLKIAEGCGHVCSFCIIPALRGRYESRTMESLV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E L ++G+KE+++I+QDT+ YG D+ G V ++ +++ L W RL Sbjct: 181 DEVAALAESGIKELILIAQDTTGYGKDI-------YGAFVLDKLLVKLSKINGLK-WIRL 232 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP D +I + E KI Y+DIP+QHAS +L MKRP + + +IK+ Sbjct: 233 LYAYPSSITDGLIEVFKEHKKICSYMDIPIQHASKNVLSAMKRPLNTPGIIEKIKRK--- 289 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LR++ I GFPGET++D L++FL G F+YS ++ A ++ L V Sbjct: 290 LPDIVLRTSIIAGFPGETKKDVNELINFLNRGYFQYAGVFEYSDLKEAVSSKLKRHVRAA 349 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI----GRSMADAPEIDGAV 410 +ER Q I ++ + I +++ ++G + GRS +PEIDG + Sbjct: 350 AAKERKIMIENAQYNIFQAKIDKIKNNTIEFLVESCLKKGNVYSIKGRSSFQSPEIDGNI 409 Query: 411 YLNGETNVKPGDILRVKVEHADEYDL 436 L + + G + KV D Y++ Sbjct: 410 ILENDKPLTVGGFCKAKVRSVDGYNI 435 >UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA2 Length = 443 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 144/440 (32%), Positives = 217/440 (49%), Gaps = 28/440 (6%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALN 72 + GC N DSER+ L + GY P D AD+++ NTC ++A +G A Sbjct: 7 TTFGCQMNEHDSERMKGMLESLGYREAPDADVADLILFNTCSIREAADSRFKAHLGHAKR 66 Query: 73 ---ENGKVI--VTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV-HHYVPKPKHNPF 125 E +V+ V GC +D++ E P V GP ++ E + + + F Sbjct: 67 RKRERPEVVIGVGGCWAQSVKDEVFEQFPFVDVAFGPGQVHKLAEFLTSESLTAQGYFEF 126 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 + K + +IS GCN C++CI+PS RG V RP+G ++++ +R+ G Sbjct: 127 EGFTGDLPEKRAREFQGWTQISVGCNMACSYCIVPSTRGRDVGRPLGVLVADVERMASEG 186 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH-- 243 V E+ ++ Q+ +AYG D+ HR GF + + L + + R+ Y P+P Sbjct: 187 VTEVTLLGQNVNAYGRDL-HRRGFPSA-----TFADLLSAVDAIDGIRRIRYTSPHPQDM 240 Query: 244 VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +DVI AE + L ++ +PLQ S R+LK M+R S +R L R+ RE P++ + + Sbjct: 241 KEDVIRAHAELEALCEHVHLPLQSGSSRVLKAMRRTYSRERYLDRVALLREHVPDVAITT 300 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVGFPGET+EDF L +E D F YSP +A LPDQVP EVK ER +R Sbjct: 301 DIIVGFPGETDEDFAQTLSLCEEVAYDGAFTFVYSPRRETEAATLPDQVPHEVKVERMDR 360 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN----V 418 +++ Q+ + ER Q VGR + V+++ G S D + G N N Sbjct: 361 LVEVIQRRAKERAQRFVGRTVEVLVE--------GPSRTDPTRLRGRSRHNKVVNFSGLA 412 Query: 419 KPGDILRVKVEHADEYDLWG 438 +PGD + V VE A L G Sbjct: 413 QPGDYVHVDVESATSQTLMG 432 >UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bacterium Ellin514 RepID=B9XHC1_9BACT Length = 556 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 118/346 (34%), Positives = 191/346 (55%), Gaps = 46/346 (13%) Query: 135 KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQ 194 +LTP+H+AY+KI+EGCNH C+FCIIP MRG SR +++ EAK+L+ GVKE+ +ISQ Sbjct: 208 RLTPKHFAYVKIAEGCNHPCSFCIIPRMRGSHRSRVQADIVREAKQLIADGVKELNLISQ 267 Query: 195 DTSAYGVDVKHRTGFHNGEPVK---------TSMVSLCEQLSKLG-----IWTRLHYVYP 240 D++ YG+D++ + P K +LC L +L W RL Y +P Sbjct: 268 DSTYYGLDLRPNHSRNIASPEKFNSAAKSLPADATTLCTLLRELNAIPGDFWIRLLYTHP 327 Query: 241 YPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D++I +A+ K+ Y+D+PLQH +L+ M+R S + I++ R P + Sbjct: 328 AHWTDELIQTIAKCKKVARYVDMPLQHIHENMLERMRRETSEQYIVNLIQRIRAGIPGIA 387 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 +R+TFIVGFPGETE F+ LL+F+++ + +R+G F YS +G A + Q+ +++K +R Sbjct: 388 IRTTFIVGFPGETETYFKTLLNFIRDTKFERLGVFTYSKEDGTRAGNMEGQLADKIKSKR 447 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIID-----------------------------EV 390 M Q +++ + + VG+E+ V+++ ++ Sbjct: 448 RELAMAEQLKVAKQVAESFVGKELRVLVEAEASAKELKNAKISSWEHGLIRGEDKQLGQL 507 Query: 391 DEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 + RS ADAP+IDG VY+ G N+ G+ +V+V +YDL Sbjct: 508 KGRYLVARSEADAPDIDGRVYVRG--NLPIGEFAQVRVIGHTDYDL 551 Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL---- 64 ++G +SLGC KNLVD+E +L L G ++ AD+VIVNTC FIDSA +ES+ Sbjct: 12 RVGLISLGCAKNLVDAEIMLGSLMKGGVEITNDATQADVVIVNTCSFIDSAQEESVDTIL 71 Query: 65 --EAIGEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH 114 E + EA N +IV+GCL + +++ ++ P+V G QV E VH Sbjct: 72 QSEEVREANNRGQGLIVSGCLPQRFREELPKLLPEVDVFMGIDQVAQVTEIVH 124 >UniRef50_B5Y8R0 2-methylthioadenine synthetase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8R0_COPPD Length = 424 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 143/438 (32%), Positives = 217/438 (49%), Gaps = 33/438 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI +LGCPKNLV ++ +L Y+VV S ++AD+++VNTCGFI AV+ESL Sbjct: 5 KIYVETLGCPKNLVRTQDFYRQLDYSNYEVVYSPEEADVIVVNTCGFIADAVEESLTVAL 64 Query: 69 EALNE--NGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 + E + ++ GC+ + G + L + VP Sbjct: 65 QLKEEYPDSVLVFAGCVPLR--------------FGTELVQSELPEFDYVVPGFNMPSAF 110 Query: 127 SLV--PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 S P Q LT YAY+ I+EGCN RC++C IP G L SRP E++ E L + Sbjct: 111 SEYQGPLQTSVLT-YPYAYVSIAEGCNGRCSYCTIPKFWGSLKSRPAVEIVDEINELYEI 169 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYVYPYPH 243 G++E++++SQDT A+G D+ R S+ L L I W RL YV P Sbjct: 170 GIREVILVSQDTGAWGTDLYGRP----------SLELLLRALRDTQIPWIRLMYVNPTFI 219 Query: 244 VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 + ++ + G++LPY DIP+Q S ++L+ M+R ++ L +K + E T R+ Sbjct: 220 TEKLLLAWKDTGRVLPYFDIPVQSGSDKVLRQMRRGYDRNQILQALKLIDGVFAENTKRT 279 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 + +VGFPGETE+D Q LD L + VG F Y E AD++ L +V E+ R Sbjct: 280 SIMVGFPGETEDDVQATLDLLIQGEFHHVGVFGYCDEEEADSHKLVPKVDPEIINTRKTA 339 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 + ++ ++ VG+ +++ IGR APEIDG GE V+PG+ Sbjct: 340 TEAVALELHRLWEEKCVGKTYQCLVEASSGSEFIGRIWGQAPEIDGMFLGKGE--VEPGE 397 Query: 423 ILRVKVEHADEYDLWGSR 440 ++ + VE L G + Sbjct: 398 MVEIVVEKTKPGQLIGRK 415 >UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Verrucomicrobia RepID=MIAB_METI4 Length = 467 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 128/428 (29%), Positives = 221/428 (51%), Gaps = 40/428 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P + + GC N+ DSE++L + GY + S AD++++NTC A +++++ + Sbjct: 2 PSVFIKTFGCQMNVRDSEQVLQDFIERGYQIASSEKWADIILINTCSVRAMAEEKAIDKL 61 Query: 68 G-----EALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP- 120 + N N + + GC+ +I E + V + G + +V E + + P Sbjct: 62 ASLKTAKKKNPNLVLGIIGCMAQNRGREIAEKYRFVDLVLGTQKFHKVAEIADNLLKNPD 121 Query: 121 KHNPFLSLVPEQG--------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + ++ L E+ + + AY+ I +GC+ C+FCI+P+ RG+ SRPI Sbjct: 122 RSSSYVDLSKEEAAHNAINKHLSTKAQPIAYVSIMQGCSMHCSFCIVPTTRGEERSRPID 181 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVD----VKHRTGFHNGEPVKTSMVSLCEQLSK 228 E+ E KRL + VKEI+++ Q + YG VK ++ F V L E+LS Sbjct: 182 EIFEEVKRLAETSVKEIVLLGQIVNRYGAKEFPWVKGKSPF----------VQLLEKLST 231 Query: 229 LGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ + P+P +D+I + + ++ ++ +P+Q S +ILK M+R S + L Sbjct: 232 IEEIKRIRFTSPHPLGFKEDLIAALRDIPQLCEHVHLPVQSGSDKILKAMRRGYSRSKFL 291 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 + + + R+ P+L L + IVG+PGETEEDFQ L E R D F+YS EG A Sbjct: 292 SLVDKLRKAIPQLALSTDIIVGYPGETEEDFQQTCSLLNEVRFDNAFIFRYSAREGTTAA 351 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE 405 +L DQ+ EEVK ER R +++Q +I+ E+ Q+ VG+ + ++++ G S +A + Sbjct: 352 SLGDQLSEEVKFERNYRLLEIQNKITMEKAQKWVGQVVEILVE--------GESKKNASK 403 Query: 406 IDGAVYLN 413 G N Sbjct: 404 FQGRTRTN 411 >UniRef50_B0VJ72 Putative 2-alkenal reductase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ72_9BACT Length = 443 Score = 203 bits (517), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 134/423 (31%), Positives = 227/423 (53%), Gaps = 38/423 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K VSLGCPKNLVDSER++ + + G +++A+++++N+C FI +A++E + Sbjct: 3 KYTIVSLGCPKNLVDSERLVAIMESYGMIRTDVWEEANILLINSCSFIFNALEELNCLLA 62 Query: 69 EALNEN----GKVIVTGCLGAK-EDQIREVHPKV---LEITGPHSYEQVL-EHVHHYVPK 119 + +N K++VTGC+ + +Q+++ +P+V + + ++E L E++ + Sbjct: 63 DVINATEKDITKIVVTGCVMNRGYEQLKDYYPEVDAWIPLKDFAAFENYLRENILPSLET 122 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 PK L Q V L +Y YL+I++GCN++C++C+IP +RG VS PI ++ EAK Sbjct: 123 PKR-----LSYTQRVHLEDGNYVYLRIADGCNNKCSYCMIPYIRGKQVSEPIETLIEEAK 177 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 + + G +E+++I+QDT +YG D+ K ++ L E L W R+ Y Sbjct: 178 SMQEYG-RELILIAQDTCSYGTDIYG----------KKALPELIEALHNQTDYDWIRILY 226 Query: 238 VYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 ++P L + K+LPY D+P+Q SP+I+K M R S ++ P Sbjct: 227 LHPDNFELQWTELWKKFPKLLPYFDVPIQQVSPKIIKAMNRRKSYQELKELFFHIQQEIP 286 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 R+T +V +P ET+ED ++L FL E + G F YSP +A L D + +E Sbjct: 287 NAVFRTTLMVDYPNETKEDLELLEKFLSEIPFLQGGVFAYSP----EAKDLKDNIYDEFD 342 Query: 357 EERWNRFMQLQQ----QISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAV 410 ++ + M + QI + L++ VG +I++ D E +GR APEIDG V Sbjct: 343 WKKSKKLMFAWEDKFYQIRNQLLEKYVGTIQSALIEDYDPYSEQYVGRLWFQAPEIDGCV 402 Query: 411 YLN 413 Y++ Sbjct: 403 YID 405 >UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Bacillales RepID=C5D4T7_GEOSW Length = 451 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 133/397 (33%), Positives = 204/397 (51%), Gaps = 18/397 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P + F +LGC N ++E I + GY+ AD+ ++NTC ++ ++S + I Sbjct: 2 PTVAFHTLGCKVNHYETEAIWQLFKKAGYERKDFDSRADVYVINTCTVTNTGDKKSRQVI 61 Query: 68 GEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 A+ N V VTGC P V + G ++LE++ + + + Sbjct: 62 RRAIRRNPDAVVCVTGCYAQTSPAEVMAIPGVDIVIGTQDRGKILEYIERFQRERQPING 121 Query: 126 LSLVPEQGV-------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 +S + + V + T R A LKI EGCN+ CTFCIIP RG + SR EV+ +A Sbjct: 122 VSNIMKTRVFEEMDVPEFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQA 181 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 ++LVDAG KEI++ T YG D+K + + L EQ+ L R+ + Sbjct: 182 QQLVDAGYKEIVLTGIHTGGYGTDLKDYS-------FAALLRDLDEQVVGLK-RLRISSI 233 Query: 239 YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 D++I ++ KI+ +L IPLQ S +LK M+R +V+ R+++ RE+ PE Sbjct: 234 EASQITDEIIEVLQRSDKIVRHLHIPLQSGSNTVLKRMRRKYTVEFFAERLQRLREVFPE 293 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 L + S IVGFPGETEE+F F++E R + F YS G A +P+QV EEVK Sbjct: 294 LAITSDVIVGFPGETEEEFMETYHFIREQRFSELHVFPYSKRTGTPAARMPNQVDEEVKN 353 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 ER +R + L Q++ E + G+ + VI +E D+E Sbjct: 354 ERVHRLIALSDQLAKEYASQFEGQVLEVIPEERDKEN 390 >UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicutes RepID=B7GKD2_ANOFW Length = 467 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 135/403 (33%), Positives = 208/403 (51%), Gaps = 18/403 (4%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 +S+V P + F +LGC N ++E I + GY+ AD+ ++NTC ++ Sbjct: 12 LSEVIYMPTVAFHTLGCKVNHYETEAIWQLFKQAGYERKDFESHADVYVINTCTVTNTGD 71 Query: 61 QESLEAIGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 ++S + I A+ N V VTGC P V + G ++LE++ + Sbjct: 72 KKSRQVIRRAVRRNPDAVVCVTGCYAQTSPAEVMAIPGVDIVIGTQDRGKILEYIEQFKQ 131 Query: 119 KPK-----HNPFLSLVPEQ--GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + N + V E+ T R A LKI EGCN+ CTFCIIP RG + SR Sbjct: 132 QRQPINGVRNIMKTRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP 191 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 EV+ +A++LVDAG KEI++ T YG D+K +N + M + L +L Sbjct: 192 KEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKD----YNFAMLLRDMDEQVKGLKRL-- 245 Query: 232 WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ + D+VI ++ + KI+ +L IPLQ S +LK M+R + + R+ + Sbjct: 246 --RISSIEASQITDEVIDVLRQSDKIVRHLHIPLQSGSNAVLKRMRRKYTTEFFAERLAR 303 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE+ P+L + S IVGFPGETEE+F +F++E R + F YS G A +PDQ Sbjct: 304 LREVFPDLAVTSDVIVGFPGETEEEFMETYEFIREQRFSELHVFPYSKRTGTPAARMPDQ 363 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE 393 V EEVK ER +R + L Q++ E + G+ + VI +E+ +E Sbjct: 364 VDEEVKNERVHRLITLSDQLAKEYASKFEGQVLEVIPEELYKE 406 >UniRef50_C8PLV8 Radical SAM domain protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PLV8_9SPIO Length = 515 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 148/501 (29%), Positives = 236/501 (47%), Gaps = 81/501 (16%) Query: 16 GCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI--GEALNE 73 GC KN VD E ++ L G+ P + AD++IVN+CGFI+ A +ES+E++ A Sbjct: 11 GCAKNQVDGELLIGILTDRGWQKTPEPEKADLIIVNSCGFIEPAKRESIESVITARAAYP 70 Query: 74 NGKVIVTGCLGAKEDQIREVH----------------PKVLEITGP-------HSYEQVL 110 + K+++ GCL + + + P +++ P S + Sbjct: 71 HAKILLAGCLAERYGDVFKTEFEEADAFFGNGDLSQLPVLIDRLFPDASPAEQQSSATLR 130 Query: 111 EHVHHYVPKPKHN-PFLSLVPEQGVKLTPR-------HYAYLKISEGCNHRCTFCIIPSM 162 + + V H+ PFL ++GV R A++KI+EGCN+ C+FC IP + Sbjct: 131 QEKYQPVSPTGHSRPFLKPA-QKGVCCGQRPELLNFPRSAFIKITEGCNNCCSFCAIPLI 189 Query: 163 RGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAY-------GVD-----------VK 204 RG + SRP +++SE + V G KE +I QD + Y +D Sbjct: 190 RGSVRSRPAADIVSEIQSFVRQGYKEFNLIGQDLAVYEAAPPADAIDRPLPLKTEAEAEA 249 Query: 205 HRTGFHNGEPVKTSMVSLCEQLS--KLGIWTRLHYVYPYPHVDDVIPLM-AEGKILPYLD 261 ++ + +P + + L +S K RL Y++P D++P+M A+ + LPY D Sbjct: 250 NKAETNKRKPKLSGLAQLLHAISGIKGQFSVRLLYIHPDHFPLDILPVMTADTRFLPYFD 309 Query: 262 IPLQHASPRILKLMKRPGSVDRQLARIKQWREIC-------PELTLRSTFIVGFPGETEE 314 IP Q S I++ M R GS + L I+ R E +R+TF+ GFPGET+ Sbjct: 310 IPFQSGSDPIIRAMNRCGSAEAYLNLIENIRAAFRSAESPYGEAVIRTTFLTGFPGETQA 369 Query: 315 DFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAER 374 DF+ FL+ + G F YS EG A + QVP ++ E+R +LQ +I+ ++ Sbjct: 370 DFERTAAFLQAVQSLWSGAFAYSQEEGTKAADMKKQVPAKIAEQRKAALNELQLKITEQK 429 Query: 375 LQEKVGREILVIIDEV---------DEEG--AIGRSMADAPEIDGAVYLNGETNVK---- 419 L G E V+I+E+ +G A+GR+ APE+DGAV +N K Sbjct: 430 LASFCGLETNVLIEEIIPQDKSSEDSTQGCIALGRAWFQAPEVDGAVVVNFSEAQKDSEG 489 Query: 420 ----PGDILRVKVEHADEYDL 436 G ++RV++ DL Sbjct: 490 QPITAGSLVRVRITALRGIDL 510 >UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESPS Length = 447 Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 140/446 (31%), Positives = 216/446 (48%), Gaps = 28/446 (6%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE---- 69 + GC NL DSE I L GY AD+V++NTC A Q+ + +GE Sbjct: 10 TYGCQMNLRDSEIIAQILNNNGYVETSEIGGADLVLLNTCSIRAKAEQKVMSKLGELRRN 69 Query: 70 -ALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGP---HSYEQVLEHVHHYVPKPKHN- 123 +N ++ V GC+ +E QI+ P V + G ++ ++LE P N Sbjct: 70 KKINPRMQICVAGCVAQQEGKQIQAKMPHVDLVIGTQYIYAINELLERSRTEGPITATNL 129 Query: 124 ----PFLSLVPEQ-GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 +PE G + ++ I +GCN+ CT+C++P RG VSR I +++ E Sbjct: 130 DDKYVIPQFIPETTGKEHEGEFRKFVTIMQGCNNFCTYCVVPYTRGREVSRSIKDIVEEI 189 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 LV +G+KEI ++ Q+ ++Y +T + + L Q++ + RL + Sbjct: 190 TVLVKSGIKEITLLGQNVNSYA-----QTNTVTEDDTPATFSDLLRQVAAVEGLKRLRFT 244 Query: 239 YPYPH--VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 P +D++ + +L P +P+Q S ++LK M R +V+ L + Q RE C Sbjct: 245 TSNPKDLSNDLMQCFKDLDVLCPQFHLPVQAGSNKVLKEMGRKYTVESYLDLVTQLRENC 304 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 PE+ + + IVGFPGET+E+F+ + L+ R FKYS G AN L ++V E V Sbjct: 305 PEIAITTDIIVGFPGETDEEFEETMKMLETVRYHGSFSFKYSDRPGTKANELTNKVDESV 364 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K R RF Q +I ER QE +G V+I+E+ +G I M + V+ G Sbjct: 365 KSARLARFQARQDEIGLERNQEYIGTTQEVLIEEL-RDGEIKGRMG----TNHIVHAIGL 419 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 TN KPGD L V A ++ L GS V Sbjct: 420 TNKKPGDFLMAHVTAAGQHSLRGSIV 445 >UniRef50_C8PFK3 2-methylthioadenine synthetase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFK3_9PROT Length = 511 Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 148/503 (29%), Positives = 233/503 (46%), Gaps = 91/503 (18%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ VSLGC KNLVDSE +L R + Y++ AD++IVNTCGFI SA QES+ AI Sbjct: 2 AKLHLVSLGCNKNLVDSEIMLG--RLQNYELTDEPASADVMIVNTCGFIASAKQESIRAI 59 Query: 68 ---GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 E ++VTGCL + +D++ P+V +G Y+++ E + K N Sbjct: 60 LKLSEQKKSGALLVVTGCLMQRYKDELMRELPEVDIFSGVGDYDKIDEMILK-----KQN 114 Query: 124 PFLSLVPEQGVKLTP-------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 F Q LT ++AY+KISEGCN +C+FC IPS +G L SR I ++ + Sbjct: 115 LFSPQTYLQSPALTSSRVITGSNYHAYVKISEGCNQKCSFCAIPSFKGRLKSRSIDDIEA 174 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHR----------------TGFHNGEPVKTS-- 218 E + LV G + I+QD+S+YG D++ G +GE S Sbjct: 175 EVRGLVARGFYDFSFIAQDSSSYGRDLRRSKKDGANFNGSEDELNFAGLRDGENFNASCC 234 Query: 219 ---------------------------------------------MVSLCEQLSKL-GIW 232 +V+L +++ K+ G+ Sbjct: 235 EQNPNSSNGDAADGISAQSRLVCDKDSGGESADADDERVHEQDIDLVALIKRIEKIKGVK 294 Query: 233 -TRLHYVYPYPHVDDVIPLMAEGKILP-YLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ Y+YP + +I + + Y D+P+QH + ++L LMKR R + Sbjct: 295 VARVLYLYPTSTDERLIRTIVSSPVFANYFDMPIQHINDKMLSLMKRGAGAARIKELLSL 354 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE P LR+ IVG PGE E +F L FL+E + DR+ F YS E + A+P Q Sbjct: 355 MRE-APNSFLRTGVIVGHPGEGEAEFDELCAFLREFKFDRISAFAYSKEEDTASFAMP-Q 412 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEID 407 + R N+ ++ ++ ++ VG+++ +II+ EG + +A +ID Sbjct: 413 ILARTISRRLNKIEKITREAIDNSMRALVGKKMPLIIEGASSEGEFFYGAKPLAWDKDID 472 Query: 408 GAVYLNGE--TNVKPGDILRVKV 428 G + +N N+K G + ++ Sbjct: 473 GEILINESYVQNLKVGGLYECEI 495 >UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=174 Tax=Actinobacteria (class) RepID=MIAB_MYCA1 Length = 715 Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 138/450 (30%), Positives = 220/450 (48%), Gaps = 42/450 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYD-VVPSYDDADMVIVNTCGFIDSAVQE-----SLEAI 67 + GC N+ DSER+ L GY + AD+V+ NTC ++A + S A Sbjct: 35 TYGCQMNVHDSERLAGLLEAAGYRRAAEGAEVADVVVFNTCAVRENADNKLYGNLSHLAP 94 Query: 68 GEALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 + N ++ V GCL K+ + + P V + G H+ + + + + +HN Sbjct: 95 RKRSNPQMQIAVGGCLAQKDREAVLRRAPWVDVVFGTHN----IGSLPTLLERARHNKAA 150 Query: 127 SLVPEQGVKLTPR---------HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + ++ P + A++ IS GCN+ CTFCI+PS+RG V R ++L+E Sbjct: 151 QVEIAEALQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRGKEVDRSPDDILAE 210 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDV------KHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 + LV GV E+ ++ Q+ +AYGV + R F ++ C ++ L Sbjct: 211 VRSLVADGVLEVTLLGQNVNAYGVSFADPALPRDRGAF-------ARLLRACGEIDGL-- 261 Query: 232 WTRLHYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + P+P DDVI MA+ + P L +PLQ S R+L+ M+R +R L I Sbjct: 262 -ERVRFTSPHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGII 320 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R P + + IVGFPGETEEDF LD ++ AR F+YS G A L Sbjct: 321 DRVRAAMPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAELD 380 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGR--EILVIIDEVDEEGAIGRSMADAPEI 406 Q+P+ V +ER+ R ++LQ+ IS + Q VG+ E+LV E ++ A R M+ Sbjct: 381 GQIPKAVVQERYERLVELQESISLQGNQALVGQTVELLVATGEGRKDSATAR-MSGRARD 439 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDL 436 V+ + V+PGD++ + A + L Sbjct: 440 GRLVHFAADDRVRPGDLVTTVITGAAPHHL 469 >UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIQ8_9FIRM Length = 444 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/443 (29%), Positives = 228/443 (51%), Gaps = 34/443 (7%) Query: 16 GCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALN--- 72 GC N D+ER++ +LRT GY+ S ++AD++++NTC ++A IGE Sbjct: 18 GCQMNQSDAERMMGQLRTIGYERTESMEEADLILINTCCVRETAEDRVYGKIGEIKRLKR 77 Query: 73 ENGKVI--VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSL- 128 EN ++I +TGC+ KE D + + P + + G + ++ V + H + L Sbjct: 78 ENPELIFGITGCMAQKEGDALIKRAPHIDFVLGTNKVHELTHVVQEIQAEHGHVVDVQLG 137 Query: 129 ---VPEQ-GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 +P+ V A++ I GCN+ CT+CI+P +RG SR +++ E + V Sbjct: 138 ETELPDDVPVARAGSLSAWVPIMYGCNNFCTYCIVPYVRGRERSRLPEDIVHEVEEAVKN 197 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH- 243 G +E+ ++ Q+ ++YG D K L + + K+ R+ ++ +P Sbjct: 198 GYEEVTLLGQNVNSYGKDHK-----------LADFADLLKMVDKVPGIRRVRFMTSHPKD 246 Query: 244 -VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D VI + +G+ L ++ +P+Q+ S RILK M R +V+ +++ R P+++L Sbjct: 247 LSDKVIAAIRDGEHLCEHIHLPVQYGSNRILKAMNRVYTVESYRDLVRRIRAAIPDVSLT 306 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + IVGFPGET+EDFQ +LDFL+E R D F YS G A + +QV E VK+ER N Sbjct: 307 TDLIVGFPGETDEDFQQMLDFLREIRYDSAYTFIYSKRSGTPAATMENQVDESVKKERLN 366 Query: 362 RFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 M +Q +IS ++ +G+ + ++++ + + +GR+ + + L Sbjct: 367 ALMAVQNEISLAINEKLLGKTLEIMVEGPSKNEPSVWMGRTRTN------KIVLFAHAGE 420 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 KPGD + V++ H + L G RV Sbjct: 421 KPGDFIDVRITHPQTWVLKGERV 443 >UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=Leptospirillum RepID=A3EV78_9BACT Length = 468 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 136/445 (30%), Positives = 222/445 (49%), Gaps = 30/445 (6%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG---EA 70 + GC N+ DSER+ L EG + V AD+++VNTC D A Q++L +G + Sbjct: 34 TFGCQMNVHDSERMAGLLTAEGGNPVSEPAAADIILVNTCTIRDKADQKALSDLGRIRQV 93 Query: 71 LNENGKVI--VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY-VPKPKHNPFL 126 E I VTGC+ +E ++I + P V I GP ++ + + + + L Sbjct: 94 RKEGPGTILAVTGCMAQREGEEIFRLVPDVDLILGPSQIRNLIPLLDAASTSRARVDGTL 153 Query: 127 SLVPEQGVKLT---PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 VPE P A++ + EGC+ C +C++P+ RG SRP+ +++ E + LV Sbjct: 154 WPVPEMTTPPAIRPPGVTAFVTVQEGCDKACAYCVVPATRGAERSRPVTDIVREVENLVS 213 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 +G +EI ++ Q+ + YG G+ S L ++LS + RL + +P Sbjct: 214 SGFREITLLGQNVNGYG---------QKGDTAGASFPELLQRLSDIPGLLRLRFTTSHPM 264 Query: 244 --VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 +D+I +MA +++P+L +P+Q S R+L+ M+R S+D I++ R+ PE L Sbjct: 265 DMSEDLIDVMATSSRVMPHLHLPVQSGSDRMLERMQRGYSLDDYRRWIEKLRKKVPEAAL 324 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + IVGF GETEEDF+ L ++E R D F YSP A++ D P E+ ER Sbjct: 325 TTDLIVGFCGETEEDFEKTLAAVEEFRFDGAFAFIYSPRPSTPAHSWEDVPPREMSVERL 384 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDG--AVYLNGET 416 R + +Q + ER Q VG + ++ ++ D E A+GR+ P+ A+ Sbjct: 385 ERLQKKVEQQAMERNQSLVGSRVEILTEKWDPETRTAVGRT----PQFQTVRALVAPERP 440 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 + PGD+L V + L G+ V Sbjct: 441 DPSPGDLLWVTITQGARAGLKGNAV 465 >UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIN5_RHOVA Length = 469 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 131/421 (31%), Positives = 203/421 (48%), Gaps = 39/421 (9%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 P+ ++ + GC N+ DSER+ L G+ + +DAD+VI+NTC + A ++ Sbjct: 19 APEKRVFIKTFGCQMNVYDSERMADALGAAGFVETGAPEDADLVILNTCHIREKAAEKVF 78 Query: 65 EAIG------EALNENGK----VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVH 114 +G EA ++G + V GC+ E + V I GP SY ++ E + Sbjct: 79 SELGRLRVLREARRQDGGGNLMIAVAGCVAQAEGEEIARRAAVDIIVGPQSYHRLPELIE 138 Query: 115 HYVPK---------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 P F SL P ++ P A+L + EGC+ CTFC++P RG Sbjct: 139 RRASTRGPVIETEFPAAEKFASL-PAPKLRAAP--SAFLTVQEGCDKFCTFCVVPYTRGA 195 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT-SMVSLCE 224 SRP+ +++ EAKRL + GV+EI ++ Q+ +A+ + G KT ++ L Sbjct: 196 EYSRPVAQIIEEAKRLAERGVREITLLGQNVNAWAGE---------GPSGKTWTLPDLLA 246 Query: 225 QLSKLGIWTRLHYVYPYPHVDDVIPLMAEG----KILPYLDIPLQHASPRILKLMKRPGS 280 LS++ RL + +P+ D L+A K++PYL +P Q S RILK M R Sbjct: 247 ALSEVNGIARLRFTTSHPN-DMSDALIAAHRDLPKLMPYLHLPFQSGSDRILKAMNRKHR 305 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 ++ L + + R+ P+L L + IVGFPGET+ DF+ + ++ + FKYSP Sbjct: 306 MEDYLRIVHRLRDARPDLALSTDIIVGFPGETDADFEETMRMVERVHFAQAYSFKYSPRP 365 Query: 341 GADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE--VDEEGAIGR 398 G A QVPE+VK ER R L VGR + V+ + +E +GR Sbjct: 366 GTPAADRAAQVPEDVKSERLARLQALLFAQQTAFNAAMVGRTLSVLWESRGRNEGQVVGR 425 Query: 399 S 399 S Sbjct: 426 S 426 >UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MIAB_AKKM8 Length = 458 Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 137/467 (29%), Positives = 230/467 (49%), Gaps = 53/467 (11%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK+ + GC N DSE++ +GY + D+AD+++ N+C + A Q++L + Sbjct: 2 PKLYIKTYGCQMNERDSEQVARMFVQKGYTMTDREDEADVILFNSCSIREQAEQKALGKM 61 Query: 68 GEALNENGKV--IVTGCLG----AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + +V G +G +K++++ + P++ + G Y +V EHV + + Sbjct: 62 GLLAKQQRHRPHVVYGMMGCMAQSKKEELFKELPRLDLVVGTQKYHRVFEHVDGILRARQ 121 Query: 122 HNPFLSL-----------VPEQGVK-------LTP--RHYAYLKISEGCNHRCTFCIIPS 161 L V E+ L P R AY+ I +GC +C +CI+P Sbjct: 122 ERRMDELQTAFSGTHVCDVAEEADSQNRIRDHLNPGVRSTAYVSIMQGCEMKCAYCIVPY 181 Query: 162 MRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVS 221 RG SRPI +V+ E K L DAGVKE+ ++ Q + YG ++ G K V Sbjct: 182 TRGAERSRPIRDVVDEVKMLADAGVKEVTLLGQIVNRYGRQMETAGG-------KGGFVQ 234 Query: 222 LCEQLSKLGIWTRLHYVYPYP---HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRP 278 L E + ++ R+ +V P+P D V K+ ++ P+Q S RILK+M+RP Sbjct: 235 LLEAVHEVEGIRRIRFVSPHPIGFRQDLVQAFTYLPKLCSHIHFPMQSGSDRILKMMRRP 294 Query: 279 GSVDRQL---ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 + L +R+KQ R P+L++ + IVGFPGETEED+ + +++ + D F+ Sbjct: 295 YRNETYLDLCSRMKQAR---PDLSITTDIIVGFPGETEEDYLLTRQAVEQVQFDNAFIFR 351 Query: 336 YSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA 395 YSP G A + +Q+PEEVKE R + + +I+ + ++ VG V+++ + A Sbjct: 352 YSPRRGTPAAVMENQIPEEVKEARNQDLLAVVNEIAIRKNRDLVGTVQEVLLEGPSKTNA 411 Query: 396 I---GRSMADAP-EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 GR+ + P +D A L GE IL +++E + + L+G Sbjct: 412 ARLSGRTSQNKPVMVDAAPDLAGE-------ILPIRIEESTGFTLYG 451 >UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=9 Tax=Fusobacterium RepID=MIAB_FUSNN Length = 435 Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 133/448 (29%), Positives = 227/448 (50%), Gaps = 36/448 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K ++ GC N+ +S +I + GYDV D+AD V +NTC + A + +G Sbjct: 3 KASIITYGCQMNVNESAKIKKIFQNLGYDVTEEIDNADAVFLNTCTVREGAATQIFGKLG 62 Query: 69 E--ALNEN-GKVI-VTGCLGAKE-DQIREVHPKVLEITGPHSYE---QVLEHVHHYVPKP 120 E AL E G +I VTGC ++ +++ + P + + G + Q +E + + + Sbjct: 63 ELKALKEKRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIEKIEN--NES 120 Query: 121 KHNPFLS----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 H + L P + A + I+ GCN+ CTFCI+P +RG S P+ E++ Sbjct: 121 THEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYVRGRERSVPLEEIVK 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + ++ V G KEI+++ Q+ ++YG D F NG+ + L +++ K+ + Sbjct: 181 DVEQYVKKGAKEIVLLGQNVNSYGKD------FKNGD----NFAKLLDEICKVEGDYIVR 230 Query: 237 YVYPYPH--VDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +V P+P DDVI ++A+ K I L +PLQ S +ILK M+R + ++ LA + + + Sbjct: 231 FVSPHPRDFTDDVIEVIAKNKKISKCLHLPLQSGSSQILKKMRRGYTKEKYLALVDKIKS 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P + L + IVGFPGETEEDF +D +++ D F YS +G A + +Q+ E Sbjct: 291 KIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSFDNSYMFMYSIRKGTKAATMDNQIEE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEIDGAV 410 VK+ER R M++Q + S + GR + V+++ + ++E GR+ + V Sbjct: 351 SVKKERLQRLMEVQNKCSFYESSKYKGRIVKVLVEGPSKKNKEVLSGRTSTNK-----IV 405 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 G +K G + VK+ + L+G Sbjct: 406 LFRGNLALK-GQFINVKINECKTWTLYG 432 >UniRef50_Q6S4W8 Putative 2-methylthioadenine synthetase n=1 Tax=Brachyspira pilosicoli RepID=Q6S4W8_BRAPL Length = 359 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 21/316 (6%) Query: 134 VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVIS 193 + + + AY++IS+GC+ C+FC IPS+RG SR I +++ EA+ G KEI +I+ Sbjct: 53 INTSTNYSAYIRISDGCHANCSFCAIPSIRGKHRSRKIEDIVKEAREYAKNGAKEINLIA 112 Query: 194 QDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTRLHYVYPYPHVDDVIPLM 251 +T+ YG D+ K ++ L ++LS + GI W R+ Y P +I M Sbjct: 113 HETTYYGYDIYK----------KLALPDLLKELSVIDGIEWIRVLYQNPVVLNKSIIDAM 162 Query: 252 AEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLAR--IKQWREICPELTLRSTFIVGF 308 + K++PY DIPLQH ILK M R G+ + I R +R++ IVGF Sbjct: 163 FKTEKVVPYFDIPLQHIDKDILKDMNR-GNRGYSFYKDMINYIRSYDENAVIRTSLIVGF 221 Query: 309 PGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW-NRFMQLQ 367 PGET E F+ L+ F+K+ +LDRVG F YS E DA + + + K+ ++ M++ Sbjct: 222 PGETVESFKKLVSFVKKMKLDRVGVFTYSEEENTDALLINKKKISKNKKLMLRDKLMRIA 281 Query: 368 QQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG--AVYLNGET--NVKPGDI 423 ++S ERL +G+ I V+I++ +E+ IGRS DAPE+DG VY + + N+ GDI Sbjct: 282 LEVSEERLSRFIGKSIDVLIEKKEEDKFIGRSKYDAPEVDGFVEVYFDKKNVDNINIGDI 341 Query: 424 LRVKVEHADEYDLWGS 439 ++VK+ H EYDL G+ Sbjct: 342 VKVKIVHNTEYDLVGN 357 >UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMH4_9BACT Length = 452 Score = 187 bits (474), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 131/454 (28%), Positives = 227/454 (50%), Gaps = 27/454 (5%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + K+ + GC N DSE + +L GY++ DAD++I+NTC D A +++L Sbjct: 2 SKEKVLIKTYGCQMNDRDSEAVEMDLLKSGYEITTEEKDADVIILNTCSVRDQAERKALG 61 Query: 66 AIGEAL-----NENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 +G + N +V V GC+ ++ D I E + V + G ++ E + K Sbjct: 62 KVGSLIKLRRKNPKLQVGVIGCMAQSRADDIVEKNAHVNFVAGTDQLHKIPELIEK--SK 119 Query: 120 PKHNPFLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + + + ++ A + I GCN CT+CI+P RG SR I Sbjct: 120 DTEDALIETGLSRDIMERLDNHPEGQMNASVAIMRGCNEYCTYCIVPFTRGQEKSRTIAS 179 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 +++E K L + GV+EI+ + Q+ +AYG+ R N E + +L + +K+ Sbjct: 180 IIAEVKALSEKGVREIMYLGQNITAYGLIEARRDRTFNKEV--SPFAALLRETAKIEGIK 237 Query: 234 RLHYVYPYPHV--DDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ + P+ DD+I + AE KI + PLQ S R+LK+M+R + + L+ I + Sbjct: 238 RIRFTSPHARYFNDDLIDTIAAEPKICRAIHFPLQSGSNRLLKVMRRRHTAEEFLSWINK 297 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 +E +T + IVGFPGETEEDF+ D E D+ F+YS + A +P+Q Sbjct: 298 MKERIDGITFTTDLIVGFPGETEEDFKATRDMCNEIDFDQQFIFRYSTRKNTPAAQMPNQ 357 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVG--REILVI-IDEVDEEGAIGRSMADAPEID 407 + EE K ER ++ ++ + +++VG EI+V + + +++ GR+ Sbjct: 358 LDEETKIERNQILLKDLEERLTHKNEQRVGTIEEIMVEGVSKRNDDKWTGRTTNYK---- 413 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + +VK GD++ +K+E A ++ L+GS V Sbjct: 414 -IVIFDPQEDVKVGDLINIKIERATQHALYGSYV 446 >UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYJ0_9FIRM Length = 440 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 131/449 (29%), Positives = 222/449 (49%), Gaps = 36/449 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K ++ GC N DSE I L++ G S ++AD+V++NTC ++A + +G Sbjct: 8 KYNIITFGCQMNERDSESIAGILKSHGL-TSASIEEADIVVINTCSIRENANNKFYGTLG 66 Query: 69 ---------EALNENGKVIVTGCL---GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 + ++ V V GC+ G + ++ P V I G H+ ++V + + Sbjct: 67 IVKNIKKKLKKNGDDLVVCVCGCMMQEGEVVEDLKARFPFVDVIFGTHNIDRVYDLIIKT 126 Query: 117 VPKPKHNPFL---SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + + + + E V +H A++ I+ GCN+ CT+CI+P RG SR + + Sbjct: 127 IETKRREIEILENAEIKEMPVDRVNKHKAFVNITFGCNNFCTYCIVPYTRGREKSRSLDK 186 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 +L E V G KE+ + Q+ ++Y + NGE + +V + SK+ Sbjct: 187 ILGETADAVSLGAKEVTFLGQNVNSYRGE--------NGENFRDVLV----EASKIQGLE 234 Query: 234 RLHYVYPYPH--VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ ++ +P D++I +M+ KI+P++ +P+Q S ILK M R +R L I + Sbjct: 235 RIRFMTSHPKDLTDELIDVMSLDKIMPHIHLPVQSGSSEILKRMNRHYDRERYLEIIDKI 294 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 + ++ + + IVGFP ETEEDF LD ++ AR D F YS A QV Sbjct: 295 YSLNEDIAITTDIIVGFPTETEEDFSKTLDLVRRARFDAAFTFMYSKRRNTKAANFDGQV 354 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 R++ +L + IS E+ ++ +GR I V++D+++ + A GRS PE V Sbjct: 355 DRVEMGRRFDMLSELLKDISFEKNKKFIGRRIKVMVDKIEGDNAEGRS----PEFK-LVK 409 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSR 440 G+ N+K GDIL V V+ A + L G + Sbjct: 410 FYGK-NIKKGDILDVVVDRASPFSLSGKQ 437 >UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Clostridia RepID=MIAB_PELTS Length = 448 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 127/406 (31%), Positives = 203/406 (50%), Gaps = 31/406 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K + GC N DSE + L + GY + +D D++++NTC +A + +G Sbjct: 3 KYRIIVFGCQMNEHDSEVLAGILESMGYCQAGNSEDPDIILINTCCVRKTAENKVFSLLG 62 Query: 69 -----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +A N N + V GC+ +E ++I+++ P V I G H+ Q+ E + + Sbjct: 63 RLRRQKAQNPNLIIGVCGCMPQQEGMAERIKQLFPHVDLIFGTHNVHQLPELIGKVIEGQ 122 Query: 121 KHNPFLSLVPEQG--------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K L + P G VK A++ I GCN+ CT+CI+P +RG SR Sbjct: 123 KQ--VLEIWPGYGGELREELPVKRKEGVRAWVTIMYGCNNFCTYCIVPYVRGREKSRSPE 180 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 V E RL G KE++++ Q+ ++YG D+ VKT SL E L + Sbjct: 181 AVYEEVARLAGEGFKEVILLGQNVNSYGKDLG----------VKTDFASLLESLENIDGI 230 Query: 233 TRLHYVYPYPH---VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ Y+ +P + V + A K+ + +P+Q S RILK M R + + + I+ Sbjct: 231 DRIRYMTSHPRDFSLRLVEAIAASKKVCEHFHLPVQAGSNRILKKMNRGYTREEYVDLIR 290 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + + P T+ + +VGFPGET+EDF LD ++E R D F Y+ G A +PD Sbjct: 291 YIKSLIPHATVTTDIMVGFPGETDEDFNDTLDLVREIRFDSAYTFVYNIRPGTPAAEMPD 350 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA 395 QV E VK+ER ++LQ +IS ER +E+VG+ V+++ + G+ Sbjct: 351 QVAENVKKERIQALIKLQNKISLERNEEEVGQTQEVLVEGEKDRGS 396 >UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=191 Tax=cellular organisms RepID=MIAB_BEII9 Length = 510 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 122/403 (30%), Positives = 197/403 (48%), Gaps = 29/403 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ S GC N+ D+ER+ L EGY + +DAD+VI+NTC + A ++ +G Sbjct: 35 KLFVKSYGCQMNVYDAERMADLLAPEGYAETSAPEDADLVILNTCHIREHAAEKVFSELG 94 Query: 69 ---------EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQV---LEHVHH 115 +A K++V GC+ E ++I V + GP SY ++ L V H Sbjct: 95 KLRLLKAEQQAAGRPVKIVVAGCVAQAEGEEILRRQKAVDLVVGPQSYHRLPDLLRRVAH 154 Query: 116 Y-----VPKPKHNPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSR 169 P + F LV Q K+ R A++ + EGC+ C+FC++P RG SR Sbjct: 155 TPGLVDTEFPAEDKFDHLVAPQPEKIAERGVGAFVTVQEGCDKFCSFCVVPYTRGAETSR 214 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ +L+E + L+ +GV+E+ +I Q+ +AY GF S+ SL +++ + Sbjct: 215 PVEAILAEVETLIASGVREVTLIGQNVNAY-------HGFDAMTGAPASLASLMARVAAM 267 Query: 230 GIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 R+ Y +P+ +D+I + ++P+L +P+Q S +IL M R L Sbjct: 268 PGLLRIRYTTSHPNDMGEDLIAAHRDIPALMPFLHLPVQSGSDKILAAMNRRHKAGDYLE 327 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 I R P++ L S FIVGFPGETE DF+ L +++ FKYS G Sbjct: 328 LIASIRAARPDIALSSDFIVGFPGETEADFEATLALIEQVGFASAFSFKYSQRPGTPGAD 387 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 PDQ+ E+VK +R R L ++ + +GR + V+ ++ Sbjct: 388 RPDQIDEDVKAQRLARLQALLEEQRQAFNKAMIGRVLPVLFEK 430 >UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bacteria RepID=YQEV_BACSU Length = 451 Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 125/388 (32%), Positives = 198/388 (51%), Gaps = 19/388 (4%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + F +LGC N ++E I + GY+ AD+ ++NTC ++ ++S + I Sbjct: 4 VAFHTLGCKVNHYETEAIWQLFKEAGYERRDFEQTADVYVINTCTVTNTGDKKSRQVIRR 63 Query: 70 ALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 A+ +N G + VTGC P V + G E++L ++ Y + + +S Sbjct: 64 AIRQNPDGVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIDQYREERQPINGVS 123 Query: 128 LVPEQGV-------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + + V T R A LKI EGCN+ CTFCIIP RG L SR EV+ +A++ Sbjct: 124 NIMKARVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLLRSRDPEEVIKQAQQ 183 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 LVDAG KEI++ T YG D+K +N + + + + E + ++ R+ + Sbjct: 184 LVDAGYKEIVLTGIHTGGYGEDMKD----YNFAKLLSELDTRVEGVKRI----RISSIEA 235 Query: 241 YPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D+VI ++ KI+ +L IP+Q S +LK M+R +++ R+ + ++ P L Sbjct: 236 SQITDEVIEVLDRSDKIVNHLHIPIQSGSNTVLKRMRRKYTMEFFADRLNKLKKALPGLA 295 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 + S IVGFPGETEE+F +F+KE + + F YS G A + DQV E VK ER Sbjct: 296 VTSDVIVGFPGETEEEFMETYNFIKEHKFSELHVFPYSKRTGTPAARMEDQVDENVKNER 355 Query: 360 WNRFMQLQQQISAERLQEKVGREILVII 387 +R + L Q++ E + E+L II Sbjct: 356 VHRLIALSDQLAKE-YASQYENEVLEII 382 >UniRef50_D2Q1R9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Actinomycetales RepID=D2Q1R9_9ACTO Length = 544 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/322 (32%), Positives = 174/322 (54%), Gaps = 19/322 (5%) Query: 124 PFLSLVPEQGVKLTPRH-----YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 P L+ P G ++ R A LK++ GC+ RC FC IP+ RG VSR EVL EA Sbjct: 212 PDLASAPASGPRVVRRRLDGGPMAPLKLASGCDRRCAFCAIPAFRGAFVSRRPTEVLGEA 271 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHN--GEPVKTSMVSLCEQLSKLGIWTRLH 236 + L + GV+E+ ++S+++++YG D+ GE ++ L+++ R+ Sbjct: 272 QWLAEHGVREVFLVSENSTSYGKDLGDLRLLETLVGE------IAAVPGLTRV----RVS 321 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y+ P +I M ++PY D+ QHAS +L+ M+R G +R L I+Q R Sbjct: 322 YLQPAEMRPTLITAMTSTPGVVPYFDLSFQHASGPLLRRMRRFGDAERFLELIEQVRGQA 381 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P +RS IVGFPGETE+D +L DFL A LD +G F YS +G +A ++ E+ Sbjct: 382 PTAGIRSNVIVGFPGETEQDVDILCDFLSRAGLDAIGVFGYSDEDGTEAETYDGKLDEDT 441 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG- 414 R +R +L + +++ R + ++G + V+++ +D + A GR+ PE+DG+ L G Sbjct: 442 IAARLDRVTRLAEDLTSARAEARIGETVEVLVESIDGDTAEGRAAHQGPEVDGSTTLTGL 501 Query: 415 ETNVKPGDILRVKVEHADEYDL 436 + GD++ +V ++ DL Sbjct: 502 PAGLAVGDLVTAEVVGSEGVDL 523 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 T + V+LGC +N VDSE + L G+ +V DAD V+VNTCGF+++A ++S Sbjct: 14 TTNATTVALVTLGCARNDVDSEELAGRLEAGGFRLVEDAADADTVVVNTCGFVEAAKKDS 73 Query: 64 LEAIGEALN--ENGK---VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 ++ + A + ++G+ V+ GCL + +Q+ E P+ + G Y + + + + Sbjct: 74 VDTLLAASDYKDSGRTQAVVAVGCLAERYGEQLAEALPETDAVLGFDDYADISDKLRSIL 133 Query: 118 PKPKHNPFLSLVPEQGVKLTP 138 KH VP KL P Sbjct: 134 SGTKHQAH---VPRDRRKLLP 151 >UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR79_9FIRM Length = 478 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 131/460 (28%), Positives = 221/460 (48%), Gaps = 34/460 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 + +V+ K + GC N D+ERI +L GY DDAD+VI+NTC +A Sbjct: 33 LKEVSFDKKYFIETYGCQMNESDTERISGQLEELGYVPADILDDADVVILNTCSIRQNAE 92 Query: 61 QESLEAIGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH 114 ++ IGE GK + + GC+ + + ++ E P + + GP+ + + V Sbjct: 93 EKVYGKIGEVKKLKGKKPGVLLGIAGCMAQENKGKLIERMPVIDFVIGPYHIHDLKDIVS 152 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRH-------YAYLKISEGCNHRCTFCIIPSMRGDLV 167 + H + P + + H +A++ I +GCN CT+CI+P +RG Sbjct: 153 RRGAEGSHVVMTQMNPNRVNDYSELHSVRKSRIFAWVPIMQGCNKFCTYCIVPYVRGRET 212 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I ++ E ++L G KEI ++ Q+ ++YG+D FH+G T SL + Sbjct: 213 SRTIDDICREIEKLAREGYKEITLLGQNVNSYGLD------FHDG----TDFGSLIHAID 262 Query: 228 KLGIWTRLHYVYPYPH---VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 K+ R+ Y+ +P V + A K++ ++ +P+QH + IL+ M R +++R Sbjct: 263 KIDGIKRVRYMTSHPKDMTFGMVDAMAASPKVVRHMHLPVQHGANEILRRMNRGYTIERF 322 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 +K RE P +T+ + I GFPGETE+ + L LKE + D F YSP G A Sbjct: 323 KELLKYVREKMPGITVTTDLITGFPGETEDMHEETLTLLKEMKFDSAYTFIYSPRRGTPA 382 Query: 345 NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMA 401 + +QV + V R M ++ +IS +E G+ VI + + + + GR+ Sbjct: 383 ARMTNQVSDAVCHRRLQEIMNVENEISLSLNKEMEGKVYTVIAEGETKQNPDNWFGRTSG 442 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + V ++ GDIL+V+V+ A + L G+ V Sbjct: 443 NK-----MVIFPKAGSLSVGDILKVRVDTAQTWILKGTIV 477 >UniRef50_Q1AW39 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW39_RUBXD Length = 445 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/437 (30%), Positives = 217/437 (49%), Gaps = 38/437 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--AL 71 + GC N+ DS+R+ + GY V Y+DAD+VI+NTC ++AV +GE L Sbjct: 35 TFGCQMNVHDSDRMRRMILDAGYAEVQRYEDADLVILNTCYVRENAVNRIRGHLGELNRL 94 Query: 72 NENG---KVIVTGCLGAKED--QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 G KV +TGC+GA ++ +++E + L + G H+ ++ E + + + P L Sbjct: 95 RREGRVKKVALTGCIGASDEAAELQEQYGIDL-VLGTHNTYELAEFIGLPTMEETYTPEL 153 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 V Q A++ I GCN+RC++C++P +RG +V RP+ VL E +RLV +G Sbjct: 154 PGVEGQ-------KSAFVTIMTGCNYRCSYCVVPRVRGRMVCRPLENVLEEVRRLVRSGT 206 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 I ++ Q A+ +H + L E +++ +P D Sbjct: 207 NYITLLGQTVDAW----RHE---------RRRFCDLLEAVAEEAPRVWFTTSHPSNMEDR 253 Query: 247 VIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 + + E I+ L +P+Q S R+LK+M R DR +I+ +RE P+ TL + I Sbjct: 254 TLRAIGERDTIVKKLHLPVQSGSDRMLKMMHRGYGADRYRRKIEVFREHVPDGTLSTDII 313 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VG PGETEED + L +++ + D FK+SP G +A + VP V + R+ ++ Sbjct: 314 VGHPGETEEDHEATLRLIEDCQFDSAYIFKFSPRRGTEAAQMEGAVPPGVVQRRFLEVLR 373 Query: 366 LQQQISAERLQEKVG--REILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDI 423 +Q + R Q KVG EI + D AIG + + AV+++ T PG+ Sbjct: 374 AVEQNAFRRNQRKVGGTEEIYIRHGRSDSGRAIGETWSGH-----AVHVD--TEAGPGEY 426 Query: 424 LRVKVEHADEYDLWGSR 440 +R ++E A + L+ R Sbjct: 427 VRARIESAGPHVLYAGR 443 >UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP71_9BACT Length = 461 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 121/399 (30%), Positives = 193/399 (48%), Gaps = 32/399 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N DSE++ + LR GY +V + DAD+V++NTC D A Q+++ G Sbjct: 16 TYGCQMNERDSEQVASSLRDRGYSIVDTEYDADVVLLNTCSVRDQAEQKAIGKAGYLKKH 75 Query: 69 EALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPK-----PKH 122 + N N + V GC+ ++ + P + + G + +V +H+ + + P+ Sbjct: 76 KKDNPNFLIGVMGCMAQNRGAELFDRLPDLDLVVGTQKFHRVPDHLDNMIQSMNGQGPRP 135 Query: 123 NPFLSLVPEQGVKLTPRHY--------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + L L E G + T R + A++ I +GCN C FCI+P RG +RPI E+ Sbjct: 136 SSVLDLGEEAGSQNTIRDHIGKKGQVQAFVSIMQGCNMNCAFCIVPKTRGRERARPIQEI 195 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFH--NGEPVKTSMVSLCEQLSKLGIW 232 + E L ++GVKEI ++ Q ++YG R F NG K+ V L E++ ++ Sbjct: 196 VDEVIGLAESGVKEITLLGQIVTSYG-----RRDFPVVNG---KSPFVQLLEKIEEIPGI 247 Query: 233 TRLHYVYPYPH---VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ + P+P D V K+ Y+ +PLQ + L+ M RP + +R + Sbjct: 248 ERIRFTSPHPRGFKQDLVEAYRDLSKLCEYVHLPLQAGCNKTLRAMNRPYTKERYREIVD 307 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R + P + + IVGFPGETE DF + D FKYS G A +PD Sbjct: 308 SLRAMVPSMYFSTDIIVGFPGETEADFNETAAMFDDIAFDMAYIFKYSIRTGTPAETMPD 367 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 Q+P+E KE R + L + S R + VG V+++ Sbjct: 368 QIPQEEKERRNQVLLDLLHKHSLARNEGLVGTTEQVLVE 406 >UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Planctomycetaceae RepID=MIAB_RHOBA Length = 479 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 134/472 (28%), Positives = 222/472 (47%), Gaps = 70/472 (14%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE---- 69 ++GC N++DSE ++ +L+ GY VV + +AD+++ NTC + A +++ A+G+ Sbjct: 12 TVGCQMNVLDSEMVIADLKRHGYTVVDTPGEADLLLYNTCSIREQAEEKTYSALGKLKET 71 Query: 70 -ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGP---HSYEQVLEHV----------- 113 A + + V GC+ K+ + I P V + GP H+ +L V Sbjct: 72 KARHPEKTIGVMGCMAQKDQETIFRRAPFVDMVVGPGQLHAIPDMLTKVTSGEGRQMAVS 131 Query: 114 -------------HHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP 160 H P +P + P Q AYL+I GC+ CT+C++P Sbjct: 132 LGRKDGKQTVVARSHETFDPLRDPTMRPTPFQ---------AYLRIQIGCDKFCTYCVVP 182 Query: 161 SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV 220 + RG R E++SEA+ L + G EI ++ Q ++Y H G +T M Sbjct: 183 NTRGPEQGRSPEEIVSEARVLAEQGALEITLLGQTVNSYR---------HRGPDGETDMA 233 Query: 221 SLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEG-----KILPYLDIPLQHASPRILKLM 275 L E+L + R+ +V YP D+ + E K+ PYL +P Q S +LK M Sbjct: 234 GLLERLHDIDGLKRIKFVTNYPK--DMTARLLETIRDLPKVSPYLHVPAQSGSDAVLKRM 291 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 KR ++ + ++ + PE ++ S FIVGF GET+EDFQ + ++ R F+ Sbjct: 292 KRGYTIADYMEMFERIETVLPEASVSSDFIVGFCGETDEDFQKSVKLIERCRFKNSFIFQ 351 Query: 336 YSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 YS EG A A L D VP EVK R N + +Q +IS E Q+ +G + V+++ ++ Sbjct: 352 YSVREGTKAAANLIDDVPREVKAARNNELLAVQDRISKEDNQKLIGDTVEVLVEGPSKKA 411 Query: 395 AIGRSMADAPEI--------DGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 +S DAP + D V +G + G ++ ++++ + L G Sbjct: 412 --DKSDLDAPIVQMTGRTICDRIVVFDGNRR-QAGQLMDIQIDDVSSHTLIG 460 >UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=MIAB_THEYD Length = 431 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 131/443 (29%), Positives = 218/443 (49%), Gaps = 44/443 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N DSER+L L T+G+ V AD+VI NTC A Q+ ++G Sbjct: 10 TFGCQMNEHDSERMLGILGTKGFIEVDEPKKADIVIFNTCAIRHKAEQKFFSSLGRVKHL 69 Query: 69 EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGP---HSYEQVLEHVHHYVPKPKHNP 124 + N K+IV GC + +++ P + I GP H E ++E+ + H Sbjct: 70 KKKNPQLKIIVAGCSAQLQGEKLLNKLPYIDYIIGPDNLHVIENIIEN------QVSHRI 123 Query: 125 FLSLVPEQG-----VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F PE VK A++ I GCN+ CT+C++P RG SRP+ +++ E Sbjct: 124 FTDENPEVANINLPVKRKDCVKAWVNIIYGCNNYCTYCVVPYTRGKERSRPVDDIIKEIS 183 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 L + G KE+ ++ Q+ ++Y + G T+ L E++ K+ R+ ++ Sbjct: 184 LLAEQGYKEVTLLGQNVNSY------KDG-------NTNFPLLLEKVEKIEGIKRIRFIT 230 Query: 240 PYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +P +++ +M + KI ++ +PLQ S +ILKLM R + + +I RE P Sbjct: 231 SHPKDLSKELVDVMKDYKKICEHIHLPLQAGSNKILKLMNRKYTYEEYFEKICWLREAIP 290 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++ + S IVGFP E EDF+ ++ LKE R D + FK+SP G A L + EEVK Sbjct: 291 DIAITSDIIVGFPQEQHEDFEKTINALKEIRFDGIFAFKFSPRLGTAAAKLDGHISEEVK 350 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNGE 415 R ++LQ +I+ + + G+ V+++ DEEG G++ + +Y Sbjct: 351 AARLIEVLKLQDEITERKNKRLEGKIQEVLVEGKDEEGFTTGKTRTNKV---VKIY---- 403 Query: 416 TNVKPGDILRVKVEHADEYDLWG 438 +++K G+I+ VK+ + L G Sbjct: 404 SDIKAGEIVNVKIAKTHRHSLEG 426 >UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Aquificales RepID=MIAB_SULSY Length = 437 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 134/449 (29%), Positives = 223/449 (49%), Gaps = 46/449 (10%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE---- 69 + GC N+ DSE++ L+T GY ++++AD+++VNTC + Q+ L A+GE Sbjct: 7 TFGCQMNVNDSEKMAGILQTLGYTPTENWEEADVILVNTCSVREKPDQKVLSALGEFKKV 66 Query: 70 -ALNENGKVIVTGCLGAKEDQIREVHPK------VLEITGPHSYEQVLEHVHHYVPKPKH 122 N N + V GCL + E++ K V T H +LE K Sbjct: 67 KKHNPNAVIGVCGCLAQRAGY--EIYQKAPFIDIVFGTTNIHHLPNLLEEAKS---GNKA 121 Query: 123 NPFLSLVPEQGVKLTP-------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 L + E L ++ A++ + GC+ +CT+CI+P+ RG SR IG++L Sbjct: 122 IEILEEIDENENLLDQFPTVRENKYTAFVTVIRGCDKKCTYCIVPTTRGRERSRRIGDIL 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E + LV+ GVKEI +I Q+ +AYG D L + ++++ R+ Sbjct: 182 REVQYLVEDGVKEIHLIGQNVTAYGKDFGD-----------VKFWELLKAVAEVDGVERI 230 Query: 236 HYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + +P +D I +MA+ +I L +P+Q S RIL+ M R + L +I+ + Sbjct: 231 RFTTGHPRDLDEDTIKVMADLPQICEALHLPIQAGSDRILQAMDRGYTQKEYLQKIELLK 290 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP-DQV 351 + P + L + IVGFPGET ED+ + +KE D+V FKYSP G A LP + Sbjct: 291 KYIPNIALSTDIIVGFPGETYEDYLETVKVIKEVEYDQVFAFKYSPRPGTPAADLPMTES 350 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAV 410 PEE+ +R N + LQ+ I+ ++ E + + ++++E+++E +GR+ + V Sbjct: 351 PEELS-KRLNDLINLQKDITFKKNLEYQDKIVEILVEEINQENKLVGRTRTNK-----LV 404 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGS 439 Y G G ++ VK+E + + L GS Sbjct: 405 YAEGSPEY-LGKLVNVKIEKVNRFSLEGS 432 >UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Proteobacteria RepID=MIAB_SYNAS Length = 461 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 123/445 (27%), Positives = 218/445 (48%), Gaps = 38/445 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALN- 72 +LGC N+ DSE+I + +GY ++AD++I+NTC + A Q++ +G N Sbjct: 24 TLGCQMNVHDSEQIAALMEEKGYICTEDANEADLIILNTCSIREKAAQKAKSQLGRYRNL 83 Query: 73 ----ENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 N + V GCL + D++ P + I G H+ Q+ + + K + Sbjct: 84 KRKKRNLLIGVGGCLAQQLGDELLTKVPDIDFIFGTHNIHQLPDFISRIEKSRKKIVETT 143 Query: 128 L---VPEQGVKLTPRH---YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 L P GV P + +++ I +GCN+ C++CI+P +RG SRP +++ E + L Sbjct: 144 LHPSTPSIGVLALPCNGQVSSFVTIMQGCNNFCSYCIVPYVRGREESRPPEDIIHEIRML 203 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 D GVKE+ ++ Q+ ++Y GF L ++ K+ R+ + + Sbjct: 204 ADHGVKEVTLLGQNVNSYARKTSGEMGF----------AELLREIEKIKGIERMRFTTSH 253 Query: 242 PH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P + +I ++ K+ ++ +P Q S RIL LM R + LA++++ R +CP++ Sbjct: 254 PKDLSEFLITAFSDLSKLCHHIHLPFQSGSDRILALMNRGYTKSDYLAKVERLRTVCPDI 313 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 ++ + IVGFPGE++EDF+ +D + + R D + FKYS EG A + +V E +K E Sbjct: 314 SITADVIVGFPGESDEDFKETIDMMNQIRFDNLFSFKYSEREGTAAVKMDGKVSEPLKLE 373 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R LQ+Q + E+ + G++ V+++ G S ++ G N N Sbjct: 374 RLQILQALQEQHTLEKNKAMEGKQEDVLVE--------GFSKNCRKDLTGRTSTNKIVNF 425 Query: 419 KP-----GDILRVKVEHADEYDLWG 438 GD++ V ++ A + L G Sbjct: 426 SGCVDLIGDMVSVLIKEAYLHSLRG 450 >UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKJ7_CALS8 Length = 434 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 131/458 (28%), Positives = 230/458 (50%), Gaps = 57/458 (12%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F +LGC N +++ I GY++V +AD+ ++NTC + + ++S +AI Sbjct: 2 KIAFYTLGCKVNQYETQAIAETFERLGYEIVDFDQEADIYVINTCTVTNVSDRKSRQAIK 61 Query: 69 EA--LNENGKVIVTGCLGAKEDQIREVHPKVLE-------ITGPHSYEQVLEHVHHYVPK 119 A + + V+V GC +V+P+ ++ I G E+++E+V Y+ + Sbjct: 62 RAKKTSPDSIVVVMGCYP-------QVYPQEVQKIEGVDIIVGTRDREKIVEYVTEYLKQ 114 Query: 120 PK-----HNPFLSLVPEQGVKLTP---RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K +N + E+ +K++ R A++KI EGC C++CIIP RG +VSR + Sbjct: 115 KKKILAVNNEYKRDTFEE-LKISSFNERTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSL 173 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +L E +RL G KE ++ + SAYG D+ + K ++V + E++SK+ Sbjct: 174 SSILDEVQRLASNGYKEFVITGINISAYGKDLDY----------KVTLVDVIEEISKIEK 223 Query: 232 WTRLHYVYPYPHV---DDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ P V D + L+ K+ +L + LQ S +ILKLM R + D + Sbjct: 224 VRRIRLSSLEPIVMKEDFIKRLVKIEKLCHHLHLSLQSGSDKILKLMNRHYTTDEYRQIV 283 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R ++ + IVGFPGE++EDF+ ++F+KE R+ F++SP +G +A +P Sbjct: 284 EMVRGYWNDVAFTTDIIVGFPGESDEDFERTVEFVKEIGFSRIHVFRFSPKKGTNAYNMP 343 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE-----EGAIG---RSM 400 QV KE+R + +++S ++ G+ + V+I+E EG G R++ Sbjct: 344 YQVNSAEKEKRSEILKSVARKLSFGFHKKFEGKIVDVLIEENSSLEGYFEGYSGNYIRTL 403 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 E +++ G+I +VKV+ A E + G Sbjct: 404 VPKTE-----------SIRVGEIYKVKVKEAFEQYVIG 430 >UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Thermotogaceae RepID=MIAB_THEP1 Length = 443 Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 122/398 (30%), Positives = 204/398 (51%), Gaps = 33/398 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 + GC N DSE + L EG+ + ++AD+VI+NTC + +++ +G+ L Sbjct: 7 TFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSELGQMLKI 66 Query: 74 NGK----VIVTGCLGAKEDQIREVHPKVLE-----ITGPHSYEQVLEHVHHYVPKPKHNP 124 K V V GC+ KE + K+LE + G + +V E V + K Sbjct: 67 KRKRKLVVGVAGCVAEKERE------KLLERGADFVLGTRAVLKVTEAVKRALQGEKVAL 120 Query: 125 FLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 F + E +L + +H+A++ I GC+ CT+CI+P RG SRP+ ++L E + Sbjct: 121 FEDHLDEYTHELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEVRE 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 L G +E+ + Q+ AYG D+K +S+ L E+ SK+ R+ ++ Sbjct: 181 LAKQGYREVTFLGQNVDAYGKDLKD----------GSSLAKLLEEASKIEGIERIWFLTS 230 Query: 241 YP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP D++I ++A K+ + +P+Q S RILKLM R + + LA +++ R P+ Sbjct: 231 YPTDFSDELIEVIARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVPD 290 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA-NALPDQVPEEVK 356 + + S IVGFP ETEEDF +D +++A+ +R+ YSP +G A D+VP E K Sbjct: 291 VAISSDIIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKGTVAWKHYKDEVPYEEK 350 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 R M LQ++I+ + + G+ + VI++ + G Sbjct: 351 VRRMQFLMNLQKRINRKLNERYKGKTVRVIVEAQAKNG 388 >UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=11 Tax=Clostridiales RepID=MIAB_DESHY Length = 447 Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 135/466 (28%), Positives = 234/466 (50%), Gaps = 54/466 (11%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTE-GYDVVPSYDDADMVIVNTCGFIDSA 59 MS K+ ++ GC + D++ LTE+ ++ GY + AD++IVNTC +SA Sbjct: 1 MSITKVPKKVVTLAYGCQMSERDAD-TLTEISSQKGYVRSQELEQADLIIVNTCCVRESA 59 Query: 60 VQESLEAIGE-----ALNENGKVIVTGCL----GAKEDQIREVHPKVLEITGPHS---YE 107 + L IGE N K+ ++GC+ GA E ++R+ P V G H+ ++ Sbjct: 60 ENKILGKIGELKHLKEANPQLKIAISGCMVQQPGALE-RLRKRAPHVDIWAGTHNIHEFQ 118 Query: 108 QVLEH------VHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPS 161 ++LE V KP+ L+ +G + AY+ IS GCN+ CT+CI+P Sbjct: 119 RLLEEAEEKGKVAEVWEKPRETQESVLLAAKG-----KLKAYVNISYGCNNFCTYCIVPH 173 Query: 162 MRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVS 221 +RG SR E+L+E + LV+ G +E+ ++ Q+ ++YG D+ F + Sbjct: 174 VRGRERSRQPEEILAEIRALVETGCREVTLLGQNVNSYGQDLDRAYDFAD---------- 223 Query: 222 LCEQLSKL-GIW-TRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRP 278 L + + + G+W R +P D +I +A G + ++ +P Q S ILK M R Sbjct: 224 LLKDVDSIDGLWRVRFMTSHPKDLSDKLIETIAAGTHLCEHIHLPFQAGSDEILKGMNRK 283 Query: 279 GSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSP 338 + + L+RI Q + I P+++L + IVGFPGETEEDF+ L+ +++ R + F YS Sbjct: 284 YTREYYLSRIAQIKVIIPQVSLTTDIIVGFPGETEEDFEQTLELIRQVRYSQAFTFMYSK 343 Query: 339 VEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGR 398 G A + +Q+P ++K+ R + + +Q S QE +G+ V+++ G Sbjct: 344 RSGTPAAQMAEQIPLDIKKRRLQQLITVQNAQSLAWRQEMIGKTCEVLVE--------GP 395 Query: 399 SMADAPEIDGA------VYLNGETNVKPGDILRVKVEHADEYDLWG 438 S ++ + G V GE + G +++V ++ A+ + L+G Sbjct: 396 SKSNPDRLTGRTRGYELVVFPGEAQL-IGTLVQVLIQDANSWTLFG 440 >UniRef50_Q0W344 Putative 2-methylthioadenine synthetase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W344_UNCMA Length = 404 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 132/438 (30%), Positives = 209/438 (47%), Gaps = 52/438 (11%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 + GC N DS I + G + S ++AD+++VNTC L A+ + Sbjct: 9 TYGCTANEADSAGIRDAVLASGGAIASSPEEADVIVVNTCAVTGHTANSMLRAVSRFPGK 68 Query: 74 NGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF---LSLVP 130 +V+V GCL E P L+ YE +V P P L L P Sbjct: 69 --RVLVAGCLAVAE-------PGRLK-----GYE--------FVDGPGSLPVVRALGLRP 106 Query: 131 EQG--VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKE 188 E G + +T R A +KI+EGCN +C++CI+ +RG + S P +++ A+R + G E Sbjct: 107 EAGLSIAMTGRT-ATIKIAEGCNGQCSYCIVRLVRGRIRSTPAPDIVEAARRAIAEGASE 165 Query: 189 ILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVYPYPHVD- 245 + + SQD+ AYG+D R + +L ++ L R+ + P+ D Sbjct: 166 LFLTSQDSGAYGLDTGVR------------LPTLIRSIASLPGNFKVRIGMMNPFSIADI 213 Query: 246 --DVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRST 303 D++ ++ K+ + IP+Q S RILKLM+RP + A I + R P +T + Sbjct: 214 LPDMVDVLNHPKVYRFAHIPVQSGSDRILKLMQRPYTEQEYSAIISRLRAGVPGITFSTD 273 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRF 363 +IVGFP ETE DF++ L+ L+ R +V ++SP G A A+PD V E K+ER Sbjct: 274 YIVGFPTETEADFRLTLEDLRTNRPLKVNITRFSPRPGTPAAAMPD-VLERTKKERSRML 332 Query: 364 MQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDI 423 L ++++ L+E VG V+ V E+G G +A P + V E ++ G + Sbjct: 333 TALHHEVTSHDLKEAVGSRRSVL---VSEKGKPGTVIARDPSYNMVVI---EEDLPLGTV 386 Query: 424 LRVKVEHADEYDLWGSRV 441 V++ A L G R+ Sbjct: 387 ANVEISAAKTTYLIGRRI 404 >UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacteria RepID=B9KY11_THERP Length = 458 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 120/384 (31%), Positives = 198/384 (51%), Gaps = 20/384 (5%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 ++GC N +S + LR GY DAD+VIVNTC A ++L IG Sbjct: 27 TIGCQMNEAESAKAAALLRQAGYVPAVREWDADIVIVNTCVVRQQAEDKALGYIGALARL 86 Query: 69 EALNENGKVIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + + ++ VTGCL +E ++ E P V GP +E+++ V L Sbjct: 87 KRRRPDVRIAVTGCLVTGQERRLAERFPWVDLWYGPSEFERLVSLVPELADVDIDLVELP 146 Query: 128 LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 ++G + P A++ + GCN C++CI+P RG SRP+ +V++E ++L GV+ Sbjct: 147 HYYDEG-QADPEVTAFVPVIYGCNFVCSYCIVPYRRGRERSRPVEQVVAEVEKLAARGVR 205 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV--D 245 E+ ++ Q +AYG D+ P + + L E++ + R+ ++ +P D Sbjct: 206 EVTLLGQTVNAYGHDL----------PGQPDLADLLERVHDVPGIERIRFLTSHPKYFSD 255 Query: 246 DVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTF 304 +I +A+ K+ ++++P+Q +L+ M+R +V+ RI + RE+ P++TL + Sbjct: 256 KLIRAVADLPKVCEHVNLPVQSGDNEVLRRMRRHYTVEEYRERIARIRELIPDVTLSTDI 315 Query: 305 IVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFM 364 IVGFPGETEE F L+E R D+V YSP G + PD VP E K R Sbjct: 316 IVGFPGETEEQFLNTYRLLEEIRFDKVHVAMYSPRPGTLSARWPDDVPREEKRRRHRAVE 375 Query: 365 QLQQQISAERLQEKVGREILVIID 388 QLQ++I+ ER + VGR + +++D Sbjct: 376 QLQERIARERNERYVGRTVEILVD 399 >UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Campylobacterales RepID=MIAB_ARCB4 Length = 436 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 126/440 (28%), Positives = 225/440 (51%), Gaps = 23/440 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 ++ K+ +LGC N DS+ I EL + +GY + +DAD++I+NTC + VQ+ Sbjct: 1 MSSNKKLFIQTLGCQMNDTDSQHIQAELEKHKGYVTTQNIEDADLIIINTCSVRERPVQK 60 Query: 63 SLEAIGE---ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLE--HVHHY 116 IG+ E K+ V GC + Q I + P V + G + ++ + V Sbjct: 61 LFSEIGQFNKKKKEGAKIGVCGCTASHLGQDIIKRAPYVDFVVGARNISKIKDVVDVKGA 120 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 V N + E T ++ A + IS GC+ +CT+CI+PS RG+ +S P ++ Sbjct: 121 VEVSIDNDESTY--EFSTAKTNKYRASVNISVGCDKKCTYCIVPSTRGEEISIPPEMIVE 178 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + ++ V+ G E++++ Q+ ++YG + K + L + +SK+ R+ Sbjct: 179 QVRKSVEQGAVEVMLLGQNVNSYGRKFSDKRE-------KYTFTKLLQDVSKIDGLERIR 231 Query: 237 YVYPYP-HVDD-VIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + P+P H+DD I A+ KI + +PLQ S +LK MKR S + L R + RE Sbjct: 232 FTSPHPLHMDDEFIEEFAKNPKISKCIHMPLQSGSTSVLKAMKRGYSKEWFLNRASKMRE 291 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD-QVP 352 + P L + + IV FPGET+EDF LD +++ + D++ FKYSP G +A L D ++P Sbjct: 292 LVPNLRITTDIIVAFPGETQEDFLDTLDVVEQVKFDQIFNFKYSPRPGTEALNLKDKELP 351 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI--DGAV 410 +E+ +R ++L ++ E + + +G + ++++ + G + + ++ G+ Sbjct: 352 DEIGSQRLIDLIELHKRYLEESMPKLIGETLNILVESLKPNGEVCGYTDNYLQVFAKGSD 411 Query: 411 YLNGE-TNVKPGDILRVKVE 429 L G+ NVK D+ R ++ Sbjct: 412 ELLGKFVNVKITDVTRTSLK 431 >UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Firmicutes RepID=MIAB_NATTJ Length = 451 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 132/452 (29%), Positives = 222/452 (49%), Gaps = 41/452 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K ++ GC N DSE + L G++ S ++AD++I+NTC + A Q+ L IG Sbjct: 11 KFYTLTFGCQMNEHDSEVLAGMLDQMGFEKAASEEEADLLIINTCAVREKAEQKVLGKIG 70 Query: 69 --EALNENG---KVIVTGCLGAKE---DQIREVHPKVLEITGPHS---YEQVLEHVHHYV 117 L EN K+ + GC+ +E ++I V I G H+ + Q+LEHV + Sbjct: 71 TLRYLKENKPDMKIAIGGCMVQQEHVANKIYRDFTHVDIIFGTHNINRFPQLLEHV---M 127 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K K +S Q + P A++ IS GC++ C +CI+P +RG SR Sbjct: 128 QKGKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVRGQQRSRDPE 187 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 + E ++L G+KEI ++ Q+ ++YG D+ F N L E+LSK+ Sbjct: 188 HIKYEVEKLAKEGLKEITLLGQNVNSYGKDLDQNISFTN----------LLEELSKIEGI 237 Query: 233 TRLHYVYPYPHVDD---VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ ++ +P D + L KI + +P+Q S +ILK M R + + + + Sbjct: 238 ERIRFMTSHPKDFDKELITTLKESNKICEHFHLPVQAGSNKILKKMGRGYTREHYVDIVN 297 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R P ++ + IVG+PGE EEDFQ LD ++ + D F YS G A + + Sbjct: 298 DIRAELPNASITTDIIVGYPGEEEEDFQETLDLVQNVKFDSAFTFVYSKRSGTPAAEMAE 357 Query: 350 QVPEEVKEERWNRFMQLQQQISAER---LQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 QV E+ K+ R + + +QQ+IS +R L+ V R ++ + + +E+ GR+ D Sbjct: 358 QVDEQTKKGRIQKLISVQQEISEQRNKDLENTVQRILVEGVSKNNEDMLSGRTRTDK--- 414 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 V+ G+ + G+++ VK+ ++L+G Sbjct: 415 --LVHFPGDKEL-IGELVDVKITRGHSWNLYG 443 >UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZS6_9BACT Length = 447 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 130/452 (28%), Positives = 220/452 (48%), Gaps = 43/452 (9%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA---VQESLEA 66 + F + GC N +D+E L L+ +GY +V ++AD+++ NTC A V L A Sbjct: 16 VFFETFGCQMNKLDAELSLGLLQEDGYSIVDKVEEADVILYNTCSVRQHAEDKVYSHLGA 75 Query: 67 IGEALNENGKVI--VTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + ++ VI V GC+ K+ Q I + P V + G + ++ E + + H Sbjct: 76 LRTLKKKHPDVIIGVLGCMAQKDAQSIFKRMPHVDLVCGTRMFTRLPELL---LKIRNHG 132 Query: 124 PFLSLVPEQGVKLTPR--------HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + V E + R + A++ + GC++ C++CI+P +RG VSR I +V Sbjct: 133 NHVLAVDEDEIVDVKRIAAYRPNVYQAFVTVMRGCDNYCSYCIVPYVRGREVSRTIADVE 192 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E LV G +EI ++ Q+ ++YG + P ++ L +L+ + RL Sbjct: 193 REVLELVSNGCREITLLGQNINSYGKSL----------PGNITLGDLLIELNGIEKLERL 242 Query: 236 HYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 +V +P D+I M++ K YL +P Q S RILK M R + I+ R Sbjct: 243 RFVTSHPKDMSRDLIRTMSQLDKACEYLHMPAQSGSDRILKKMHRGYTAGYYRELIQYAR 302 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 ++ P + + FIVGFPGETEEDFQ + +++ R FKYS G A L D VP Sbjct: 303 DLMPTIKVAGDFIVGFPGETEEDFQETVCLMEDIRFQNSFIFKYSTRTGTKAAELTDDVP 362 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +E+K++R + LQ++IS E ++ +GR++ V+++ G S +D ++ G Sbjct: 363 DEIKKKRNTTLLDLQKKISLEENKKLIGRKLQVLVE--------GASKSDPNKLSGRTRQ 414 Query: 413 NGETNVKP-----GDILRVKVEHADEYDLWGS 439 N K G ++ + + A + L+G+ Sbjct: 415 NNIVVFKGQPALVGTLVDITINEATDLTLFGT 446 >UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=MIAB_COPPD Length = 426 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 122/435 (28%), Positives = 206/435 (47%), Gaps = 19/435 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K + GC N DSE + L++ G++ + D+D+V++NTC A + ++ I Sbjct: 2 KYYIFTYGCQMNKNDSEMVSGILKSSGWEEAKNVVDSDLVVINTCSVRLHAEERAIGTIS 61 Query: 69 EALNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 KV+V GC+ + ++I P V + GP +L+ ++ + + Sbjct: 62 ALKKLGKKVVVMGCMSEVRGNEIMSRFPHVQAVLGPSYEAHILDVLNGERRILVGDEKVD 121 Query: 128 LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 +H Y+ I +GC+ CT+CI+P RG + SR +L E + VD G Sbjct: 122 FEKYSSANRKEKHSVYVSIMKGCDDFCTYCIVPFTRGRVQSRDPESILEEVRVCVDNGAV 181 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP---HV 244 EI ++ Q+ + YG D+ +G+ VSL E+++ + R+ ++ P+P Sbjct: 182 EITLLGQNVNDYGKDL---SGW--------DFVSLVERVATIDGVRRIRFMSPHPANFKK 230 Query: 245 DDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTF 304 DD+ L ++ PY +PLQ IL+ M R + + RE P + + + Sbjct: 231 DDITRLANLPQVAPYYHLPLQSGDDEILRRMNRKYTTGEFAELVGFIRESVPNVAIGTDL 290 Query: 305 IVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEG-ADANALPDQVPEEVKEERWNRF 363 IVGFPGE++E FQ FL++ + D V YSP G A A VP EV + R++ Sbjct: 291 IVGFPGESDEHFQNTFKFLEKMQFDVVYMAIYSPRPGTAAARQETSFVPAEVAKARYDEL 350 Query: 364 MQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDI 423 ++LQ++IS Q VG V+ID E+ G+ + P + V +V PG+ Sbjct: 351 LRLQEKISYSINQRYVGTLQEVLIDR--EDKTTGKFIGRTP-TNKTVVFTSIRHVSPGEF 407 Query: 424 LRVKVEHADEYDLWG 438 + V++ A + L+G Sbjct: 408 VDVRINEAKSWVLYG 422 >UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fusobacteriaceae RepID=C7NCD8_LEPBD Length = 441 Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 131/458 (28%), Positives = 221/458 (48%), Gaps = 42/458 (9%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + ++ GC N+ +S ++ L+T GY++ ++ D+V +NTC + A + Sbjct: 2 EKRATIITYGCQMNVNESAKMKQMLQTMGYNMTEDIENTDLVFLNTCTVREGAAVKVYGK 61 Query: 67 IGEALN----ENGKVI--VTGCLGAK-EDQIREVHPKVLEITGPHSYEQV---LEHVH-- 114 +G+ ++GK+I VTGCL + D+ + P V + G + ++ LE + Sbjct: 62 LGDLKRIKEEKDGKMIIGVTGCLAQEVRDEFIKKTPYVDLVLGNQNIGRIPDILERIESG 121 Query: 115 ---HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 H V + + V A + I+ GCN+ CTFCI+P +RG S P+ Sbjct: 122 EDTHIVMVDDEDELPTRVD---ADFGDDIVASISITYGCNNYCTFCIVPYVRGMERSVPL 178 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-- 229 E++ + ++ G KEIL + Q+ ++YG D F NG+ + L EQ + + Sbjct: 179 NEIIRDVEQYTKKGYKEILFLGQNVNSYGSD------FANGQD---NFAELLEQSANVEG 229 Query: 230 GIWTRLHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W + YV P+P D+VI ++A KI L +PLQ S +IL M R + + +A Sbjct: 230 DFW--IKYVSPHPKDFSDEVIDVIARNPKIARMLHLPLQSGSTKILDSMNRGYTKEEFIA 287 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 K+ +E P++ L + IVGFPGET+EDFQ +D + E + F YS G A Sbjct: 288 LAKKIKEKIPDIGLTTDIIVGFPGETDEDFQDTMDVVNEVGFENAFMFMYSKRTGTPAAT 347 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADA 403 + +QV E+ K ER + M+LQ + E Q+ +G+ + V+++ + E GRS Sbjct: 348 MEEQVDEQTKNERLQQLMRLQNMKAKEESQKYLGQTVKVLVEGPSRKNPEMLTGRSSTHK 407 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + G + VK+ A + L+G V Sbjct: 408 -----IILFKSDRKDLKGQFVNVKIYDAKTWTLYGEMV 440 >UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=8 Tax=Deinococci RepID=MIAB_THET2 Length = 465 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 139/455 (30%), Positives = 214/455 (47%), Gaps = 57/455 (12%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 ++ GC N DS + +EL + G+++V S ++AD V+VNTC V++ +G+ Sbjct: 30 IITYGCQMNEYDSHLVASELVSLGWELVDSVEEADFVLVNTCAVRGKPVEKVRSLLGQLR 89 Query: 72 NENGK----VIVTGCLGAKEDQIREVHPK--VLEITGPHSYEQV---------------L 110 E + + + GCL A+ D+ +++ K V + GP + + Sbjct: 90 KEKERRGLLIGMMGCL-AQLDEGQQMAKKFGVDVLLGPGALTSLPEALKANERFFDLTFR 148 Query: 111 EHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 E V Y+P P A++ I GCNH CT+CI+P+ RG VSR Sbjct: 149 EDVLDYIPPPPKGAL---------------SAHVTIIRGCNHHCTYCIVPTTRGPEVSRH 193 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 +L E + L AGV E+ ++ Q+ ++YG D +P S L + +G Sbjct: 194 PDLILKEIELLKQAGVVEVTLLGQNVNSYGKD----------QPGFPSFAELLRMVGGMG 243 Query: 231 I-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 I R +P DD+I +AE I Y+ +P+Q S R+L+ M R L RI Sbjct: 244 IPRVRFLTSHPVNFTDDIIEAIAETPAICRYIHLPVQSGSDRVLRRMAREYRRAHYLERI 303 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ RE P+ L + IVGFPGETEEDFQ L E D+ F YSP G A Sbjct: 304 RKIREALPDAVLSTDIIVGFPGETEEDFQETLSLYDEVGYDQAYMFIYSPRPGTPAYKHF 363 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVII-DEVDEEGAI-GRSMADAPEI 406 +P EVK ER R ++ Q++ S R E VG+ + V++ E EEG + G + P Sbjct: 364 QDLPREVKVERLMRLIEKQKEWSYRRNLEWVGKTVEVLVRGEAKEEGFVQGHDRGNHP-- 421 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + PG + +V+++ A + L+G V Sbjct: 422 ---VLVPASQAPVPG-LYQVEIKQATPHLLFGEVV 452 >UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillonella RepID=D1BMG0_VEIPT Length = 431 Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 21/389 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + F +LGC N D++ + Y+ V + AD+ ++NTC + ++S + I + Sbjct: 4 VAFTTLGCRVNQYDTDAMKGLFLQNNYEAVDFDEKADIYVINTCSVTNMGEKKSRQLIRK 63 Query: 70 A--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH-NPFL 126 A NE+ VIVTGC + V + G ++ +++E V + N Sbjct: 64 AKRQNEDAYVIVTGCYAQLDPDAIAAIDGVNLVIGTNNRSKIVELVEQLESTERQINAVR 123 Query: 127 SLVPEQGVKLTP-------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 ++ E + P + A++KI EGCN+ C FCIIP RG L SR + +++ EAK Sbjct: 124 DIMKESNFEEMPLFGNESDKTRAFMKIQEGCNNYCAFCIIPYTRGKLKSRKVDDIVQEAK 183 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 RLVD G EI++ YGV++ G P +V ++ L R + Sbjct: 184 RLVDHGFHEIVLTGIHLGNYGVELP-------GRPTLADVVKALLEIPNL-YRIRFGSIE 235 Query: 240 PYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 D+++ LMA K + P+L +PLQ S +LKLMKR ++ I R +L Sbjct: 236 SVEVSDELVELMATNKRVCPHLHLPLQAGSDHVLKLMKRHYTLQEYKDLITSLRSRIKDL 295 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 ++ + I GFP ET+EDF+ L+ ++E + F YS EG A + DQVPE VK+ Sbjct: 296 SITTDIIAGFPQETDEDFEETLNTVREIGFTHIHAFPYSIREGTPAATMADQVPEAVKKT 355 Query: 359 RWNRFMQLQQQISAERLQEKVGR--EILV 385 R L Q + ++G+ EIL+ Sbjct: 356 RVALLNGLSQSGYERYAKSRIGKPGEILI 384 >UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransferase n=3 Tax=Planctomycetaceae RepID=A6CGG9_9PLAN Length = 510 Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 133/439 (30%), Positives = 215/439 (48%), Gaps = 55/439 (12%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ ++GC N++DSE ++ +LR GY++ + +A+ ++ NTC + A + ++G Sbjct: 33 KLYIETVGCQMNMLDSELVVADLRKRGYELTQNVKEAETILFNTCSVREHAEHKIYSSLG 92 Query: 69 E----ALNENGKVI-VTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHV------HHY 116 A KVI V GC+ K+ + I + P+V + G QV + H Sbjct: 93 RLRYGARKNPKKVIGVMGCMAQKDQKLIFQKAPQVDFVVGTGQLAQVASLIDKARVNHSQ 152 Query: 117 VPKPKH----------------NPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCII 159 + + N F S P + ++ P Y A+++I GC+ C++C++ Sbjct: 153 NVRSRELAVGLGRKDGKLAEITNSFQSYDPLRDPEMRPSPYQAFVRIMIGCDKFCSYCVV 212 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 PS RG SR E+LSE K L D GVKE+ ++ Q ++Y KH +G+ + S Sbjct: 213 PSTRGPEQSRSPREILSEVKVLADQGVKEVTLLGQTVNSY----KHT---QDGKLFRLS- 264 Query: 220 VSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILP----YLDIPLQHASPRILKLM 275 L + + +R+ +V YP D L+ + LP YL +PLQH +LK+M Sbjct: 265 -DLLYLIHDVEGISRIKFVTSYPK-DMTTDLLEAIRDLPKATRYLHVPLQHGCNDVLKVM 322 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 KR +V+ +++ EI P ++ S FIVG PGETEE Q+ L+ ++E R FK Sbjct: 323 KRGYTVEDYREMMQRVNEILPGCSVSSDFIVGHPGETEESHQLSLESIREFRFKNSFIFK 382 Query: 336 YSPVEGAD-ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVI-------- 386 YS G A D++P+ VK+ R N + +Q QIS E E +G+++ V+ Sbjct: 383 YSERPGTKAAERFKDEIPDAVKKRRNNEMLAVQNQISEEDNAEFIGKQVEVLVEGPSKSA 442 Query: 387 ---IDEVDEEGAIGRSMAD 402 I+E E +GRS D Sbjct: 443 QKAIEESLAEQLVGRSNCD 461 >UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_CLOTH Length = 480 Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 131/454 (28%), Positives = 223/454 (49%), Gaps = 49/454 (10%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA---VQESLEAIGEA 70 + GC N DSE++ L GY + +++D+VI NTC ++A V L + Sbjct: 49 TFGCQMNEHDSEKLAGMLAEMGYAETDNVNESDLVIYNTCCVRENAELKVYGHLGMLKPL 108 Query: 71 LNENGKVI--VTGCLGAKED---QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH--- 122 N+ ++ V GC+ + + I++ + V I G H+ + E ++ + Sbjct: 109 KNQKPDLVIAVCGCMMQQPEVVEHIKKTYSHVDLIFGTHNLYKFPELLYSAMDSQTTVVD 168 Query: 123 --------NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 +++ + GVK A++ + GCN+ CT+CI+P +RG SR + ++ Sbjct: 169 VWDCDGQIAENVAIERKDGVK------AWVTVMYGCNNFCTYCIVPYVRGRERSRSMDDI 222 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + L G KEI ++ Q+ ++YG D+ T F L +++K+ R Sbjct: 223 LEEVRMLGRQGFKEITLLGQNVNSYGKDIGDGTSF----------AELIREVNKIPGIER 272 Query: 235 LHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P DD+I M + K+ +L +P Q S RILKLM R + + + + + Sbjct: 273 IRFTTSHPKDLSDDLIYAMRDCEKVCEHLHLPFQAGSTRILKLMNRKYTKEDYINLVAKI 332 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +E P++ L + IVGFPGETEEDF LD L++ R D F YS G A + DQV Sbjct: 333 KENIPDIALTTDIIVGFPGETEEDFSDTLDILEKVRFDNAYTFLYSKRTGTPAAKMEDQV 392 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDG 408 PEEVK+ER+ R ++ Q +IS E +G+ + V+++ V +++ GR+ G Sbjct: 393 PEEVKKERFQRLLETQNRISKEINDTFLGKVVEVLVEGVSKTNDKIFTGRTR-------G 445 Query: 409 AVYLNGETNVK-PGDILRVKVEHADEYDLWGSRV 441 +N E + G ++ V++ + L GS V Sbjct: 446 NKVVNFEADASLIGKLVNVRINTVKTWSLEGSIV 479 >UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSZ3_9BACE Length = 471 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 117/402 (29%), Positives = 199/402 (49%), Gaps = 39/402 (9%) Query: 10 IGFV-SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + FV + GC +N DSERI L+ GY +A ++++NTC + A Q L +G Sbjct: 35 LAFVDTYGCQQNEADSERIRGYLKEMGYGFTQDEKEAAVIVINTCAIREHAEQRVLGNVG 94 Query: 69 EAL-----NENGKVIVTGCLGAK---EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK- 119 + N N + + GC+ + +IR + V + GPH+ + E ++ + + Sbjct: 95 ALVHTKRKNPNQIICLCGCMVQEPHNAAKIRTSYRHVDMVFGPHALWRFPEFLYRILTRR 154 Query: 120 -----PKHNPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 +P + +V + GVK A++ I GCN+ C++CI+P +RG SR Sbjct: 155 GRIFETADDPGSIAEGIPVVRQNGVK------AWVSIMYGCNNFCSYCIVPYVRGRERSR 208 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 +L+E + L AG KEI ++ Q+ ++YG D+ P L +++ + Sbjct: 209 DPEGILAEVEELAKAGYKEITLLGQNVNSYGKDL----------PEPMDFADLLRKVNAV 258 Query: 230 --GIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 R +P + + MAE K+ P + +P+Q + R+LK M R + + L Sbjct: 259 PGDFLIRFMTSHPKDATEKLFDAMAECEKVAPVIHLPVQAGNNRVLKAMNRVYTREIYLE 318 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 +++Q R+ P++ L S IVGFPGET E+F+ + L+E D + F YSP EG A Sbjct: 319 KVRQLRQRIPDIVLTSDIIVGFPGETTEEFEDTMSLLREVEYDALFTFIYSPREGTPAAK 378 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 +PD + +E K + R + LQ +IS ++ Q G+ I ++D Sbjct: 379 MPDPMSKEEKSANFQRLVDLQNEISLKKHQAYEGKTIRCLVD 420 >UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDK5_DESAH Length = 460 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 120/449 (26%), Positives = 223/449 (49%), Gaps = 36/449 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 ++GC N D+ER+ L GY AD+++ NTC + A +++ +G Sbjct: 20 TIGCQMNTYDTERLFFILGGLGYVKTNDLHRADIIVCNTCSIREKAQEKAFSFLGRVPPL 79 Query: 69 EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY------VPKPK 121 + + I+TGC+ +E +++ + + + + G ++ ++ H+ + + + Sbjct: 80 KKAKPHLITIMTGCVAQQEAEEVFKRNACIDIVLGTQAFSRLGGHIMNVLNGRGQITDVE 139 Query: 122 HNPFL-SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 +P + +P+ + ++ I +GC++ CT+C++P +RG SR ++ E Sbjct: 140 DSPAIYEAMPDFSFIDNDKVSRFVTIMQGCDNFCTYCVVPYVRGRERSRTPESIVEEISI 199 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 L DAGVKE+ ++ Q+ ++YG E + S L EQ+S++ R+ + Sbjct: 200 LADAGVKEVTLLGQNVNSYG----------QKEQI-CSFSDLLEQISRVSGIERIRFATS 248 Query: 241 YPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P DD+I + + K+ L +P+Q S RILK M R + ++ L R+ + R+ CP Sbjct: 249 HPKDLSDDLIYAIRDIDKVCNQLHLPVQSGSNRILKKMNRGYTKEQYLERVGKLRKNCPS 308 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + L S I+GFP ET DF +D ++ D + F YS A A+ D V + K Sbjct: 309 IALSSDMIIGFPSETRADFDETMDLVRRVEFDGIFAFAYSDRPQAPASKFSDGVEDAEKM 368 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPEIDG------A 409 ER N +Q Q +++ ++ Q VG V+++ + ++ G + +D P++ G Sbjct: 369 ERLNELIQFQDEMTHQKNQALVGAWEQVLVEGLSQKKRHDEGENPSDFPQMTGRTESGKI 428 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V+ G NV PG+IL VK+++A + LW Sbjct: 429 VHFYG-NNVCPGEILDVKIKYAYPHSLWA 456 >UniRef50_Q4FNN5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Candidatus Pelagibacter RepID=MIAB_PELUB Length = 446 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 120/453 (26%), Positives = 221/453 (48%), Gaps = 44/453 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI + GC N DS RI ++ G++ Y+DA+ ++NTC D A ++ IG Sbjct: 4 KIFIKTFGCQMNEYDSNRIFDTVKKIGFEKTEKYEDANCYLLNTCHIRDKAKEKVYHEIG 63 Query: 69 EA---LNENGK--VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPK--- 119 E K V+V GC+ E+Q + + P + + GP SY ++ E + +++ Sbjct: 64 RVKKIFREKKKPIVVVAGCVAQAENQEMLKREPYIDIVIGPQSYHKINEAILNHLKNKKK 123 Query: 120 ---------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 K N +LS + + K++ ++L I EGC+ C FC++P RG SRP Sbjct: 124 EEETEFDTISKFN-YLSQIKNKDSKVS----SFLTIQEGCDKFCHFCVVPYTRGPEYSRP 178 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 ++++EAK LV +G KEI+++ Q+ +AY D E K + L +L Sbjct: 179 FDQIINEAKELVQSGAKEIILLGQNVNAYSYD---------EEGKKYRLSDLLIKLDSFD 229 Query: 231 IWTRLHYVYPYPH--VDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 R+ Y +P DD+I + K++P + +P+Q S +IL LM R +++ L Sbjct: 230 KLERIRYTTSHPKDMTDDLINVYKTSSKLMPLVHLPVQSGSNKILNLMNRKHTIEEYLLV 289 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 ++ R+I P++ S FI+G+P E E+DF+M ++ +++ + F +SP G A L Sbjct: 290 YEKLRKINPKIEFSSDFIIGYPEEDEQDFKMTMELIEKVKFINSYSFIFSPRPGTVAANL 349 Query: 348 P--DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE 405 DQ ++ R +Q+++ ++++ E ++ V+ + G + E Sbjct: 350 TLVDQ------KKSKQRLEIIQEKLFNNQIKKNKSLENKILNVLVENKMKDGIKLFGRTE 403 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 +V +G G +++V++ +++ L+G Sbjct: 404 YMTSVIFDGNIE-NIGKLVQVEIISSNQNSLFG 435 >UniRef50_D1YVW1 Putative 2-methylthioadenine synthetase n=1 Tax=Methanocella paludicola SANAE RepID=D1YVW1_METPS Length = 406 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 123/401 (30%), Positives = 201/401 (50%), Gaps = 43/401 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI + GC N DS+ I + G +VV + ++AD V+VNTC + + L+AI Sbjct: 2 KIYIETHGCTANASDSQAIRNSVLASGGEVVGTPEEADTVVVNTCAVTEFTSKSMLKAIK 61 Query: 69 EALNENGKVIVTGCLGAKE----DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + + +V+V GC+ A + IR + ++ E G + ++L Sbjct: 62 KYSGK--RVVVAGCMAAAQPYLLKGIRNI--QIAEAPGAEAVARML-------------- 103 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 ++P G A + I+EGC C++CI+ +RG L S P+ EV+ K + Sbjct: 104 --GIMPAAGRPFIKGTSAVVSIAEGCRGHCSYCIVRLVRGPLRSAPVEEVVHSIKTALRM 161 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW-TRLHYVYPYPH 243 G +EIL+ +QDT AYG+D GE + M E LS G + RL + P+ Sbjct: 162 GAREILLTAQDTGAYGLDA--------GERLPALMK---EILSIEGDYRIRLGMMNPFSI 210 Query: 244 VD---DVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 D D+ + + ++ + IP+Q S RIL LM+RP + + + + R+ P +TL Sbjct: 211 ADILGDMARIFNDPRVYRFAHIPVQSGSDRILGLMERPYTESQYRDIVARLRQEVPGITL 270 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + +IVGFP ET+EDF + +D L+ R +V ++SP G A + + +P +K+ER Sbjct: 271 STDYIVGFPTETDEDFALTMDDLRSTRPLKVNITRFSPRPGTPAACM-ENLPFRIKKERS 329 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMA 401 QL I++E +++ GR + V+ V EEG G S+A Sbjct: 330 RALTQLHHGITSEYMRDSAGRRLSVL---VTEEGKPGTSVA 367 >UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R676_9PLAN Length = 475 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 129/441 (29%), Positives = 208/441 (47%), Gaps = 62/441 (14%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 ++GC N++DSE ++ LR GY++ AD+++ NTC + A ++ A+G Sbjct: 8 TVGCQMNVLDSEMVVASLRKRGYELERDEASADVLLFNTCSVREQAENKTYSALGRLRSL 67 Query: 69 EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHV-------------- 113 + N + + V GC+ K+ Q + + P V + GP ++ + + Sbjct: 68 KKANPDKIIGVMGCMAQKDQQLVFDRAPYVDLVVGPGQLSRIPDLIDQVAAGHGKQMAVS 127 Query: 114 -------------HHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP 160 H P +P + P Q AYL+I GC+ CT+CI+P Sbjct: 128 LGRKDAANEEVRRSHETFDPLRDPTMRPTPFQ---------AYLRIQIGCDKFCTYCIVP 178 Query: 161 SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV 220 S RG RP ++ EA+ L D G KEI +I Q ++Y + +GE T + Sbjct: 179 STRGPEQGRPPQQIYDEARILADQGCKEITLIGQTVNSYR--------YKSGEST-TRLS 229 Query: 221 SLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKR 277 L LS++ RL +V YP +D++ + + K+ PYL +P Q S +L MKR Sbjct: 230 DLLVNLSEIDGIKRLKFVTNYPKDMTNDLLAAVRDLPKVSPYLHVPAQSGSNTVLTRMKR 289 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 SV+ + + E+ P+ + S FIVGF GETE DF+ + + R FKYS Sbjct: 290 GYSVEDYREMMARIYEMVPDAAVTSDFIVGFCGETEADFEATKQLVSDCRFKNSFIFKYS 349 Query: 338 PVEGAD-ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 G A L D +P +VK R N ++LQ +IS + Q+ +G+ + V++ EG Sbjct: 350 ERPGTKGAELLADDIPFDVKHRRNNELLELQNRISEQENQKFLGQRVEVLV-----EGPS 404 Query: 397 GRSMADAPEIDG-AVYLNGET 416 R+++ E++G V L G T Sbjct: 405 SRAVSRG-EVEGDLVQLTGRT 424 >UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Bdellovibrio bacteriovorus RepID=MIAB_BDEBA Length = 453 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 53/434 (12%) Query: 1 MSKVTPQPKIGF------VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCG 54 + V P IG + GC N+ D+ER+ L + + V A ++I+N+C Sbjct: 8 LESVEKNPDIGMGRGVYISTYGCQMNVNDTERMYALLEMQNFVPVTDPKKASLIIINSCS 67 Query: 55 FIDSAVQESLEAIG-----EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQ 108 + V + +G + N K+ V GC+G +E + + + P + + G + Sbjct: 68 VREKPVHKVYSEVGTYKYMKRKNPELKIGVGGCVGQQEKENLMKTQPMIDFVFGTDQIDS 127 Query: 109 VLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHY----------AYLKISEGCNHRCTFCI 158 + + V + LV + +P H Y+ I++GC++ CTFC+ Sbjct: 128 LPQLVAKSFAGERR-----LVNSRFEHRSPYHIETLVRNPGVATYVNITKGCDNFCTFCV 182 Query: 159 IPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAY----GVDVKHRTGFHNGEP 214 +P RG SRP+ +L++ + LV GVKE+ ++ Q+ ++Y G+D Sbjct: 183 VPYTRGREKSRPVQHILTDIRHLVKRGVKEVTLLGQNVNSYQGDEGID------------ 230 Query: 215 VKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE--GKILPYLDIPLQHASPR 270 L +++K R+ Y +P ++ +MAE KI+ Y+ +P Q S + Sbjct: 231 ----FADLLAKVAKETDVERIRYTTSHPKDFNQKLVDVMAEHSNKIMEYIHLPFQAGSTK 286 Query: 271 ILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDR 330 +L+ M R + + L RI ++ P + + IVGFPGETEEDFQ L+ + E + Sbjct: 287 VLERMNRNYTREEYLERIAMIQKGLPNVCFSTDIIVGFPGETEEDFQDTLNMVTEVGFET 346 Query: 331 VGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV 390 + F YSP A DQ+PE+VK ER NR + + ++ ER++ G + V+++ V Sbjct: 347 IFAFSYSPRPFTKAAKFEDQLPEDVKNERLNRLFDVHEAMAFERVKRYEGTTMKVLVENV 406 Query: 391 DEE-GAI-GRSMAD 402 D + G + GRS + Sbjct: 407 DRDHGKMQGRSTGN 420 >UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLB8_FIBSS Length = 440 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 131/461 (28%), Positives = 216/461 (46%), Gaps = 51/461 (11%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K + GC N DS I EL G + +DAD++IVNTC + A + ++ I Sbjct: 3 KYHLATYGCQMNEYDSAMIAQELDMCGCVETNNQEDADIIIVNTCSVREKAEETAIVNIS 62 Query: 69 E-----ALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + N + KV+V GC+ ++ + V I GP Y ++ E + P H Sbjct: 63 KLKYLRKKNPDVKVVVCGCMAKNRGPELLKRLKNVNYIVGPDQYRKIPELLFGDAQSPLH 122 Query: 123 NPFLSLVPEQG---------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + ++ KL A++ I GCN RC++CI+P +RG R + + Sbjct: 123 KTHHKMFIDEDRDENYLGEYAKLQNDVSAFVAIQRGCNKRCSYCIVPYLRGPEKYRDMDD 182 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 VL+E KR D G+ E++++ Q +AY + +L ++S++G Sbjct: 183 VLTEVKRAADKGITEVMLLGQTVNAY-------------KTPNADFTTLLTKVSEIGGIK 229 Query: 234 RLHYVYPYP--HVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ + P+P + +++I L+ K+ Y IPLQ S ILK M+R ++++ + I+Q Sbjct: 230 RIRFTSPHPRHYTNELIDVLLNNPKVCHYAHIPLQSGSDAILKKMRRQHNMEQYMTVIEQ 289 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R P + + I GF GET+EDF+ + + + D F YSP +G ++ + Sbjct: 290 LRSKDPYYAISTDVICGFVGETDEDFEQTIKAFEACQFDTAYMFIYSPRKGTESFNEAEI 349 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGR--EILVIIDEVDEEGAIGRSMADAPEIDG 408 + E K R +R ++LQ I+ +R Q +GR EILV E G S D E+ G Sbjct: 350 LTPEEKSARHSRLVELQNAITLKRNQMMIGRTEEILV------EHG----STRDKTELVG 399 Query: 409 ------AVYLNGETN--VKPGDILRVKVEHADEYDLWGSRV 441 V E +KPGD ++VK++ + L G+ V Sbjct: 400 KTDNFKKVIFKPEEGRIIKPGDYVKVKIDDIRGWTLRGTLV 440 >UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=14 Tax=Desulfovibrionales RepID=MIAB_DESVH Length = 449 Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 124/396 (31%), Positives = 187/396 (47%), Gaps = 36/396 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 + GC N+ DS+ + L G+ P + +A + IVNTC D Q+ +G Sbjct: 10 TFGCQMNVNDSDWLARALMERGFSPAP-FGEARLTIVNTCSVRDKPEQKVYSLLGRIRQA 68 Query: 74 NGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 K V V GC+ + P+V + G + + V +P LS Sbjct: 69 TSKKPDAFVAVGGCVAQQIGSGFFSRFPQVRLVFGTDGLAMAPQALDRLVEEPDLK--LS 126 Query: 128 LV------PEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 L+ PE+ G P ++ I +GC++ C +CI+P RG SR G +L E Sbjct: 127 LLDFSEDYPERDAVLGQGAVPAS-VFVNIMQGCDNFCAYCIVPYTRGRQKSRATGTILDE 185 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + L+D G +EI ++ Q+ +++G D H G T+ L +++ L RL + Sbjct: 186 CRALLDRGAREITLLGQNVNSFGQD-SHGDG--------TTFAQLLHKVAALPGLERLRF 236 Query: 238 VYPYPHVDDVIPLMAEG-----KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 V P+P D+ P + E + P L +PLQ S RILKLM R + R L + R Sbjct: 237 VTPHPK--DIAPEVVEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLR 294 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P++ L S IVGFPGETEEDF +D L+ F YS G A LPD++ Sbjct: 295 AARPDIVLSSDIIVGFPGETEEDFMETMDALETVGYAASYSFCYSDRPGTRAEMLPDKLS 354 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 EVK ER R LQ +++ LQ+ VGR++ V+++ Sbjct: 355 REVKLERLERLQTLQNRLTERCLQDMVGRKVEVLLE 390 >UniRef50_C8WY42 MiaB-like tRNA modifying enzyme n=58 Tax=Bacillales RepID=C8WY42_ALIAD Length = 471 Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 125/398 (31%), Positives = 188/398 (47%), Gaps = 37/398 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P + F +LGC N D+E I + GY VP AD+ +VNTC + ++S + I Sbjct: 2 PTVAFHTLGCKVNFYDTEGIWQTFKRRGYTQVPFDSVADVYVVNTCTVTHTGDRKSRQMI 61 Query: 68 GEAL--NENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 A+ N + V+VTGC D+I + L + G ++++HV + + K P Sbjct: 62 RRAVRTNPDAVVVVTGCYAQIAPDEIARIQGVDL-VVGNDQKSKIVDHVEAVLAERK--P 118 Query: 125 FLSL-------------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 +L++ VP R A LKI +GCN+ CTFCIIP RG + SR Sbjct: 119 YLAVGNIMQATEFDELDVP----YFEERSRANLKIQDGCNNFCTFCIIPRARGLIRSRKP 174 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 V+ +A +L AG +EI++ T YG D F N + L L ++ + Sbjct: 175 ENVVLQATKLARAGYREIVLTGIHTGGYGED------FEN-----YRLADLLLDLERIDL 223 Query: 232 WTRLHYV-YPYPHVDDVIP--LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ +DD + L A K++P+L IPLQ S +L+ M R + ++ Sbjct: 224 PFRIRISSIEASEIDDRLMDVLAASKKVVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKL 283 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ R P+L + + IVGFPGET+E F F++ ++ F YSP G A Sbjct: 284 RELRRRLPDLAVTTDVIVGFPGETDEQFGETYAFVRAQGYAQLHVFPYSPRRGTAAYKFK 343 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVI 386 DQVPE+VK R R + L + VGRE+ VI Sbjct: 344 DQVPEDVKRARVARMIALGDDLRQAYAASFVGRELEVI 381 >UniRef50_Q2GCU4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Alphaproteobacteria RepID=MIAB_NEOSM Length = 471 Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 119/410 (29%), Positives = 196/410 (47%), Gaps = 27/410 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K + GC N+ DSE I + G+ + +DAD++I+NTC + A ++ +G Sbjct: 30 KFHIKTYGCQMNVYDSEMIEKIVSGLGFTLSERAEDADLIILNTCNIREKAAEKLYSELG 89 Query: 69 E------ALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGP---HSYEQVLEHVHHYVP 118 + E ++V GC+ E ++I V + GP HS +++ V+ Sbjct: 90 QIRLLQKKKQERILIVVAGCVAQAEGEEIMRRAENVDVVVGPQSIHSLPELIAKVNRQSG 149 Query: 119 KP---KHNP---FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K + +P F L E + P+ A+L I EGC+ C FC++P RG SR Sbjct: 150 KAIKMEFDPIEKFDYLAEETRKRRVPQSSAFLSIQEGCDKFCAFCVVPYTRGAEYSRSTE 209 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 EV EA L GVKEI ++ Q+ + Y H T +G V ++ L +L K+ Sbjct: 210 EVYREALSLTTKGVKEITLLGQNVNGY-----HGT-LDSGNKV-LNLGQLISRLGKIPSL 262 Query: 233 TRLHYVYPYP---HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ Y +P H + E K++P++ +P+Q S +ILK M R + L I Sbjct: 263 KRIRYTTSHPVDMHKELYDAHANESKLMPFVHLPVQSGSDKILKQMNRKYTTADYLKIIN 322 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 +++ ++ S FIVGFPGE+++DFQ L +++ + FKYSP G P Sbjct: 323 EFQNARSDIAFSSDFIVGFPGESDDDFQQTLALIEQVNYAQCYSFKYSPRPGTPGATYP- 381 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS 399 Q+ EE K R + QL ++ E ++ +G+ + V+ D+ + GR+ Sbjct: 382 QISEETKNTRLQKLQQLLKEKQLEFNKKMIGKTVTVLFDKKHPDKISGRT 431 >UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MIAB_SYNFM Length = 456 Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 127/407 (31%), Positives = 189/407 (46%), Gaps = 35/407 (8%) Query: 1 MSKVTPQPKIGFV-SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 ++K P P+ +V + GC N DS+R L L GY DAD++ +NTC D A Sbjct: 5 LAKTAPAPRYLYVRTFGCQMNEYDSQRALRLLCAVGYRPTSDIADADVIFLNTCSVRDKA 64 Query: 60 VQESLEAIGEALNENG-----KVIVTGC----LGAKEDQIREVHPKVLEITGPHSYEQVL 110 Q+ +G K++V GC LG + E V+ G S +L Sbjct: 65 EQKVYSFLGRLRRLKAHRPWLKIVVAGCVAQQLGDGLLKRFEHVDLVVGTRGIGSIASLL 124 Query: 111 EHVHHYVPKPKHNPFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMR 163 E V + H P L QG T A + I +GCN+ CT+CI+P +R Sbjct: 125 EEVERSKRRVAHLPAEEL---QGFTTDKCRTVGTGDVVAQVTIMQGCNNFCTYCIVPHVR 181 Query: 164 GDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC 223 G SR ++L E L G +E+L++ Q+ ++YG G P S L Sbjct: 182 GRERSRAPDDILREIDFLASRGAREVLLLGQNVNSYG----------RGLPDPISFPDLL 231 Query: 224 EQLSKLGIWTRLHYVYPYPH--VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGS 280 ++ K R+ + +P +D+I A L +L +P Q S ILKLM R + Sbjct: 232 RRIGKETSIRRVRFTTSHPKDLTEDLIECFAGLPFLCKHLHLPFQSGSDGILKLMHRGYT 291 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 + L +I + RE+CPE+ L + IVGFP E+EED+ L ++E R D + F+YS Sbjct: 292 ARQYLEKIARLREVCPEIALSTDVIVGFPAESEEDYLQTLRLIEEVRFDSLFSFRYSDRP 351 Query: 341 GADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVG--REILV 385 A PD+VP +VK R R +Q I+ ++ + G RE+LV Sbjct: 352 LTRAAGFPDKVPMDVKVRRLARLQSIQADITLQKNLAETGTVREVLV 398 >UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKT1_9BACT Length = 436 Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 115/397 (28%), Positives = 198/397 (49%), Gaps = 39/397 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N DS+RI L G + +AD+VIVNTC + A Q++L ++G Sbjct: 10 TYGCQMNEYDSDRIQNAL---GASITEDPKEADIVIVNTCAIREKADQKALSSLGRFKHL 66 Query: 69 EALNENGKVIVTGCLGA--KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 +A N V V+GC+ ED IR + P + + GP + Q+ + + K Sbjct: 67 KAKNPELIVGVSGCVAQLYGEDLIRRI-PHLDFVLGPRAIPQLPQLIEEIKEKKSRPVET 125 Query: 127 SLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 S ++ + P H A++ I +GCN +C +CI+P++RG V+RPI ++++EA+ L Sbjct: 126 SFDIQEPFDVLPYHQEGKPAAFVSIQQGCNKKCAYCIVPTVRGSEVNRPIEDIIAEARYL 185 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 + GVKEI +I Q +++ + G G+ L L +L R+ + Y Sbjct: 186 IAKGVKEITLIGQTVNSWKLG-----GLKFGD--------LLRVLGELDGLERIRFTTSY 232 Query: 242 PHVDDVIPLMAEG-----KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 P D+ M E K+ ++ +P+Q S ++L+LM R S + + + R+ P Sbjct: 233 PR--DITKKMVEAMADVPKVCRHIHLPVQSGSDKVLRLMNRTYSRSWYIDSVNRLRDAMP 290 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL---PDQVPE 353 + + S IVGFPGETE+DF+ + ++E D FKYSP G L ++V + Sbjct: 291 NIAVSSDIIVGFPGETEDDFEQTMSLVEEVGFDSSFSFKYSPRPGTVGEELWRSGERVED 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV 390 +R R + Q+ I+ E+ +++G+ V++++ Sbjct: 351 STAGQRLARLQEYQRAITLEKNAQRIGKSEQVLVEDA 387 >UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2 Tax=Mobiluncus mulieris RepID=C2KPF3_9ACTO Length = 552 Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 127/407 (31%), Positives = 195/407 (47%), Gaps = 44/407 (10%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDD------------ADMVIVNTCGFIDSAV 60 V+LGC N DSER+ L G V S + AD+V++NTC ++A Sbjct: 30 VTLGCQMNEHDSERMAGLLDAAGMVPVSSVPEKAARATRAGDGGADVVVLNTCSVRENAA 89 Query: 61 QESLEAIGEALNENGK------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQV---- 109 + +G+ L E + + V GC +E I P V I G H+ + + Sbjct: 90 NKLYGHLGQ-LAEVKRERPGMMIAVGGCFAQQEGSGILRRAPWVDAIFGTHNIDMLPVLL 148 Query: 110 ----LEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 L + F S++P + +P A++ IS GCN+ CTFCI+PS+RG Sbjct: 149 RRAELRQEAAVELEETLKVFPSMLPAH--RTSP-ASAWVSISVGCNNTCTFCIVPSLRGR 205 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 R E+L E + +V G E+ ++ Q+ ++YG NG + + L + Sbjct: 206 ERDREPEEILRELQAVVAQGAVEVTLLGQNVNSYG----------NGFGRRGAFAQLLRE 255 Query: 226 LSKLGIWTRLHYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVD 282 + RL + P+P +DVI MAE ++P L PLQ S R+L+ M+R V+ Sbjct: 256 AGRTPGLERLRFASPHPAAFTEDVIAAMAETPTVMPSLHFPLQSGSDRVLRQMRRSYRVE 315 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 R L + + R+ PE + + IVGFPGET+ DF+ L +++AR F YS G Sbjct: 316 RFLRILGEVRDAIPEAAITTDVIVGFPGETDADFEATLRVMEQARFSAAFTFIYSRRPGT 375 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 A DQVP EV ER+ R + LQ++IS E + G+ + V++ E Sbjct: 376 PAADREDQVPSEVVSERYQRLLALQERISTEENERLEGQTVEVLVGE 422 >UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Acidobacteria RepID=MIAB_SOLUE Length = 445 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 118/387 (30%), Positives = 190/387 (49%), Gaps = 26/387 (6%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 + GC N DSE+++ L EGY+ V + + A++V NTC D A Q+ + E Sbjct: 13 TFGCQMNAHDSEKVVGTLLAEGYEQVATPEAAELVFYNTCSIRDKAEQKVFNRLQNFKRE 72 Query: 74 --NGKVI-VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLV 129 GK+ V GC+ +E ++I + P V + G SY ++ E + + LSL Sbjct: 73 GMKGKIFGVLGCVAQQEGEKIFDRAPHVSLVAGSASYTRLPEMLVQLEAGNRRVTGLSLD 132 Query: 130 PEQGVK--LTPR---HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 E+ T R H AYL I EGC+ C +C++P RG SR V++EA+ L + Sbjct: 133 TEETFDTPFTRRDNPHRAYLTIIEGCDKACAYCVVPFTRGPERSRTSESVMAEARGLTEK 192 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV 244 G E+ ++ Q+ ++Y + P +L +++++ R+ Y +P Sbjct: 193 GYTEVQLLGQNVNSY----------RDPSPAGWDFATLLAKVAEIPGMRRVRYTTSHPR- 241 Query: 245 DDVIPLM----AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 D V P++ A I ++ +P+Q S ++L M R + D L RI + +L Sbjct: 242 DFVRPIVDAMDANEAICDHIHLPVQSGSSKVLAAMDRLYTRDEYLRRIDWIKSAKRRYSL 301 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + I+GFPGET+ DF+ LD L E + D + FKYSP A A+ D++PEE K+ R Sbjct: 302 TTDIIIGFPGETDADFEQTLDLLDEVQYDSLFSFKYSPRPNTSALAMEDRIPEEEKQRRL 361 Query: 361 NRFMQLQQQISAERLQEKVG--REILV 385 + Q+ I R E +G +E+LV Sbjct: 362 LTLQEKQRAIQIRRNAEMIGSIQEVLV 388 >UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridiales RepID=C7H7X5_9FIRM Length = 460 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 27/398 (6%) Query: 8 PKIGFV-SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + FV S GC +N+ D ERI L GY + +DAD+++ NTC + A Q Sbjct: 23 PPLAFVHSYGCQQNVNDGERIKGVLVDIGYGLCDKPEDADLILFNTCAVREHAEQRVFGN 82 Query: 67 IG--EALNENGKVIVTGCLGAKEDQ------IREVHPKVLEITG-------PHSYEQVLE 111 +G + L E + ++ G G +Q +R+ +P V + G P Q L+ Sbjct: 83 VGALKGLKEKKRGLMIGLCGCMANQKHVVEKLRKSYPYVDLVFGVDGIDTLPQLIAQKLQ 142 Query: 112 HVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + +P P + V ++ A+L I GC++ CT+CI+P +RG SR Sbjct: 143 KHKRVLMEPAQRPVI--VENIPIRRESEFRAWLPIMYGCDNFCTYCIVPYVRGREKSRKP 200 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 G++L+E + LV+AG KEI ++ Q+ ++YG ++ + F + + LC I Sbjct: 201 GDILAEFRGLVEAGYKEITLLGQNVNSYGKGLEEQVDFAD------LLNLLCAVPGDYQI 254 Query: 232 WTRLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R +P +I + A+ + +L +P+Q S +LK M R ++ + + I+ Sbjct: 255 --RFMTSHPKDASHKLIDTIAAQPHLCKHLHLPVQCGSDELLKKMNRHYTIGQYMELIEY 312 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R+ P +T S IVGFPGETEEDFQ L+ +K+ ++ F YS G A +PD Sbjct: 313 ARKKVPGITFSSDIIVGFPGETEEDFQDTLELVKKVGYMQLFTFIYSKRTGTKAAEMPDP 372 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 P K +R R +++Q +I+ + ++++VG+ + V+++ Sbjct: 373 TPRAEKTDRMTRLLKVQDEIAMDLVRQQVGQTVRVLVE 410 >UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR40_9FIRM Length = 447 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 117/379 (30%), Positives = 189/379 (49%), Gaps = 27/379 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F++LGC N DS+ + + GY V ++AD+ ++NTC ++S + + Sbjct: 12 KVSFITLGCKVNQYDSDAMRSLFIRNGYKVAKENENADVYVINTCSVTSIGDRKSRQMVR 71 Query: 69 EALNEN-GKVIVT-GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH---- 122 E+ G VI GC + V I G + ++E+V + K Sbjct: 72 RIRREHPGAVIAAAGCYAQLAPDVFVQMGDVDVIVGIQNRSHIVEYVEEAAAEKKTLNAV 131 Query: 123 ------NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 F +L + ++ R A++KI EGC++ CTFCIIP RG L SR + + Sbjct: 132 GDIMAVTDFENLSVDAEGEVKTR--AFIKIQEGCDNYCTFCIIPFARGKLKSRRQSDAVE 189 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTR 234 E +RLV+ G +E+++ YG D+ H+G TS+ +L +L ++ + R Sbjct: 190 EIRRLVEKGYREVVLTGIHLGNYGKDL------HDG----TSLSTLVTELVRIPDLLRIR 239 Query: 235 LHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + D++I ++ E K+ P+L +P+Q S ILK M R + I+ R+ Sbjct: 240 LGSIESVELSDELIRIIREEPKVCPHLHLPIQAGSDDILKRMNRHYRLAEYKELIRNLRK 299 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P L L + IVGFPGETEE+F+ LD L+E + + F YSP +G A A P+QV Sbjct: 300 EIPGLALTTDLIVGFPGETEENFRETLDTLQELQFSAIHVFPYSPRKGTPAAAYPNQVKP 359 Query: 354 EVKEERWNRFMQLQQQISA 372 E+K+ER R L ++++ Sbjct: 360 EIKKERAARVQALGKELAG 378 >UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Bulleidia extructa W1219 RepID=D2MLZ6_9FIRM Length = 480 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 29/398 (7%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N+ D E + L G+ + AD+++ NTC +A ++ + IG Sbjct: 49 TYGCQANVRDGESLSGMLEMMGFTYAEVPEKADVILFNTCAIRRAAEEKVMAEIGNLKYL 108 Query: 69 EALNENGKVIVTGCLGAKEDQIREV---HPKVLEITGPHS---YEQVLEHVHHYVPKPKH 122 + N ++ GC+ ++D + E+ HP++ I G H+ + +L+ V V K + Sbjct: 109 KKEKPNIIFVLCGCMAQEKDVVEELLQKHPQLDLIFGTHNLYRFPALLQEVM--VKKIQK 166 Query: 123 NPFLS----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 S +V VK + ++ I GC+ CT+CI+P RG SR + ++L E Sbjct: 167 VEVYSQEGEVVESLPVKRSMSSKGFVNIMYGCDKFCTYCIVPYTRGKERSRRMKDILEEV 226 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHY 237 L +G KE++++ Q+ +AYG D+ GF L +S GI R + Sbjct: 227 SALKKSGRKEVVLLGQNVNAYGKDLHMEDGF----------TDLLRAISDTGIERIRFYT 276 Query: 238 VYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +P + +I LMAE K I+P+L P+Q S ILK M R +V+ ++ + + P Sbjct: 277 SHPRDYRSSLIDLMAERKNIMPFLHFPVQSGSNEILKRMARGYTVEHYISLYDEMMKKIP 336 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +T + IVGFPGE++EDF+ ++ ++ + D F YSP G A ++ D + +EVK Sbjct: 337 NMTFTTDIIVGFPGESDEDFEKTMNLVEHCQYDMAYTFLYSPRVGTPAASMTDSISKEVK 396 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 + R R Q ++I+A++ + +GR + V+ + + ++ Sbjct: 397 KARLQRLNQRLREIAAKKNKVYLGRIVRVLCEGISKKN 434 >UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJG9_9BACT Length = 423 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 131/442 (29%), Positives = 212/442 (47%), Gaps = 40/442 (9%) Query: 20 NLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG-----EALNEN 74 N DS RI G+ ++ D +IVNTC + ++ AIG + Sbjct: 2 NEYDSLRIAAVFDKIGFTEAEEMEEGDYLIVNTCSVREKPQHKAESAIGRFRQIKRRRPE 61 Query: 75 GKVIVTGCLGAKEDQIREVHPK----VLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVP 130 K+ GC+ +E + K V+ G H E+V+ HV + + V Sbjct: 62 VKIGFCGCVAQQEGENLLKTNKDIDFVVGTDGLHRLEEVVAHV-----EAGERLSDTQVN 116 Query: 131 EQGVKLTPRH-----YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 E G+++ + +++ I +GCN+ C++CI+P +RG SR E++ E K L D G Sbjct: 117 EGGLEIDIFNREVSVSSFVTIMKGCNNFCSYCIVPYVRGREKSREQSEIIDEIKYLADKG 176 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH-- 243 +EI ++ Q+ ++YG + +PV S L +++S + R+ +V +P Sbjct: 177 AREITLLGQNVNSYGTALT--------DPV--SFPELLDKVSDVEGIKRIRFVTSHPKDF 226 Query: 244 VDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +++I +M KI YL +PLQ S +L+ M R + D R+ + +E+ P+L L S Sbjct: 227 SNELIDVMRGNDKICEYLHLPLQSGSNAVLQKMNRKYTYDHYKERVLRAKEMIPDLALSS 286 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 FIVGFPGETEEDFQ + L+E R D + F YS G A + D VP EVK+ R + Sbjct: 287 DFIVGFPGETEEDFQSTMKALEEIRYDMIYAFNYSTRPGTKAESFNDDVPLEVKKMRLAK 346 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYLNGETNVK 419 + Q++I AE + V+++ ++GA GR+ + V + ET + Sbjct: 347 LLDAQKRIIAENSAAYQDLVVEVMVEGESKKGAGQYSGRNRQNR-----VVNFSSETILS 401 Query: 420 PGDILRVKVEHADEYDLWGSRV 441 GD + VK+ L G RV Sbjct: 402 SGDFVNVKITEPRPNSLLGERV 423 >UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=23 Tax=Proteobacteria RepID=MIAB_SPHWW Length = 453 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 129/406 (31%), Positives = 192/406 (47%), Gaps = 36/406 (8%) Query: 6 PQPKIGFV-SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 P PK V S GC N+ D R+ L +G S D AD+V++NTC + A ++ Sbjct: 8 PAPKSFHVKSFGCQMNVYDGARMAELLEAQGMHAADSADAADLVVLNTCHIREKAAEKVY 67 Query: 65 EAIGE-----ALNENGK----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVH 114 IG A E G+ + V GC+ E +I P V + GP +Y + + V Sbjct: 68 SDIGRIVKKAADAEEGRARPMIAVAGCVAQAEGPEIPRRAPAVDIVVGPQAYHNLPQLVA 127 Query: 115 HYVPK--------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 P + F +L + T A+L + EGC+ CT+C++P RG Sbjct: 128 DAAEGRRALDTDMPAASKFDTLPKRRRQGPT----AFLTVQEGCDKFCTYCVVPYTRGAE 183 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAY-GVDVKHRTGFHNGEPVKTSMVSLCEQ 225 +SRP G ++ EAK LVDAG +EI ++ Q+ +A+ G D + RT +G L Sbjct: 184 ISRPWGAIVDEAKALVDAGAREITLLGQNVNAWTGEDDRGRTQGLDG---------LIRA 234 Query: 226 LSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVD 282 L L R+ Y +P+ D +I E K++P+L +P+Q S RILK M R Sbjct: 235 LDALPGLARIRYTTSHPNDMSDGLIAAHGEVAKLMPFLHLPVQAGSDRILKAMNRSHDAA 294 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 L I++ R P++ + FIVGFPGET+EDF+ L ++ + FKYSP G Sbjct: 295 GYLRLIERVRAARPDIAVSGDFIVGFPGETDEDFEATLAIVRAVDHAQAFSFKYSPRPGT 354 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 A ++ QV V +ER R L + VG+ V+I+ Sbjct: 355 PAASMDGQVAPAVMDERLQRLQALLNEQQHRFNLATVGKRCEVLIE 400 >UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=534 Tax=Proteobacteria RepID=MIAB_PSYCK Length = 497 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 122/413 (29%), Positives = 202/413 (48%), Gaps = 48/413 (11%) Query: 9 KIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ + GC N+ DS ++L L + G +V + D+AD++++NTC + A ++ + Sbjct: 45 KVFVTTQGCQMNVYDSGKMLDVLGDSHGMEVTHNIDEADVLLMNTCSIREKAQEKVFSEL 104 Query: 68 GEALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGP---HSYEQVLEHVHH--- 115 G K + V GC+ ++E D I++ P V + GP H ++ + H Sbjct: 105 GRWRKLKEKRPDLVIGVGGCVASQEGDNIQKRAPYVDMVFGPQTLHRLPELYDQSHQQRE 164 Query: 116 YVPKPKHNPF---------LSLVPE---QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMR 163 PK + +PE +G K A++ I EGC+ C+FC++P R Sbjct: 165 IAPKNRIGTVDVSFPSIEKFDFLPEPRVEGFK------AFVSIMEGCSKYCSFCVVPYTR 218 Query: 164 GDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC 223 G+ +SRP+ +VL+E L GV+EI ++ Q+ + Y GE S+ Sbjct: 219 GEELSRPLDDVLAEIDSLAAQGVREINLLGQNVNGY-----------RGEKDDGSICRFA 267 Query: 224 EQL---SKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKR 277 E L S + R+ Y +P DD+I A+ +++ +L +P+Q S IL MKR Sbjct: 268 ELLHYVSHVDGVERIRYTTSHPLEFTDDIIDAYAQLPELVSHLHLPVQSGSNAILAAMKR 327 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 ++D + +I + + I P++ L S FI+GFPGET++DFQ L+ KE D F YS Sbjct: 328 NHTIDVYINQINKLKAIRPDIHLSSDFIIGFPGETDQDFQDTLNLAKELNFDHSYSFIYS 387 Query: 338 PVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV 390 G A LPD V + K+ER F ++ + + E VG V++++V Sbjct: 388 KRPGTPAAELPDDVSFKTKKERLAEFQKVIIDSTLAKTHEMVGTTTRVLVEQV 440 >UniRef50_C1SMW7 MiaB-like tRNA modifying enzyme n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMW7_9BACT Length = 439 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 123/429 (28%), Positives = 208/429 (48%), Gaps = 37/429 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 + GC N V+SE+I+ E + V + ++AD++I NTC + A + + +A Sbjct: 7 TFGCKVNQVESEKIVNEFKDYNLTSVDTANEADLLIFNTCAVTERAENKFHSMVRKARGA 66 Query: 74 NGKVI--VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH--NPFLS- 127 N VI VTGC K+ D+++ + ++ +T + +LEH+ V K H + F S Sbjct: 67 NPDVIIAVTGCAAEKDKDKLKALGADIV-VTNSGKMD-ILEHI---VKKTDHLDSIFESK 121 Query: 128 -LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 + + + R A++KI +GC+ C +CIIPS+RG VSR V++E K LV AG Sbjct: 122 GFLEADNISMATRTRAFVKIQDGCDSNCAYCIIPSLRGLPVSRASEAVIAEVKTLVKAGY 181 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVYPYPHV 244 KEI+ + YG D+K + + L E++ + RL + Sbjct: 182 KEIVPVGIHVGKYGQDLKE----------EIDLPHLIEKIIAIEGDFRVRLTSIELNELT 231 Query: 245 DDVIPLMAEG--KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 D +I ++AE KI + IPLQ S L +M R + + + ++ + +E+ P L + Sbjct: 232 DRMIQMLAENTEKICRHYHIPLQSGSSHTLSMMNRKYTAEEYITKLNRLKELVPGCLLGA 291 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVGFPGET++ F LD LK++ L+ + F YS G A+ + D+V +VK ER + Sbjct: 292 DVIVGFPGETDDHFAETLDTLKKSGLEHLHVFSYSDRSGTKASEMSDKVSGKVKSERAKK 351 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 + + ++ V + I ++ + D G D + + +V+PG Sbjct: 352 LRAFAENVKFHAAEQCVDK-IYKVLTQKDNTGI----------TDNYFTVRFKEDVEPGS 400 Query: 423 ILRVKVEHA 431 L V + +A Sbjct: 401 FLDVLITNA 409 >UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=C4Z0P5_EUBE2 Length = 446 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 130/447 (29%), Positives = 218/447 (48%), Gaps = 56/447 (12%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD--ADMVIVNTCGFIDSAVQESLEA 66 K+ SLGC N ++E + LR EGY++VP +D AD+ I+NTC + A ++S + Sbjct: 7 KVAIHSLGCKVNSYEAESMEIMLRDEGYEIVPFSEDVQADIYIINTCSVTNIADRKSRQM 66 Query: 67 IGEA--LNENGKVIVTGCL------GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + +A +N V+ GC G K+D+ ++ I G + ++E ++ Y Sbjct: 67 LHKAKKMNPEAVVVAAGCYVQADPDGVKKDECVDI------ILGNNMKISIVEALNDYFG 120 Query: 119 KPKHNPFLSLVPEQ-------GVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 +L + ++ + T H AY+KI +GCN C++CIIP +RG + SR Sbjct: 121 GADKTSYLVDINDKYQEYESLKINQTGEHTRAYIKIQDGCNQFCSYCIIPYVRGRVRSRK 180 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL- 229 ++++E K L GVKE+++ S+YG D+++ S++ L E + ++ Sbjct: 181 PEDIVNEVKTLAATGVKEVVLTGIHISSYGTDLEN-----------ISLIELIEAIHEIE 229 Query: 230 GI-WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 GI RL + P ++ +A KI P+ + LQ + LK M R + + Sbjct: 230 GIKRIRLGSLEPRIITEEFAKRIAGLEKICPHFHLSLQSGCDKTLKAMNRKYNTEEYYEG 289 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + RE+ + + IVGFPGETEEDF FL++ + FKYS +G A+ + Sbjct: 290 CVKLREVFENPAITTDVIVGFPGETEEDFLETRKFLEKVHFYEMHIFKYSRRKGTVADKM 349 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 +QV + VK ER + L++ S E + +G+ + V+I+E+ EID Sbjct: 350 KEQVADTVKSERSAVLLALEKAQSLEYRKMYIGKRLEVLIEEL-------------TEID 396 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEY 434 G Y G T + +RV + ADE+ Sbjct: 397 GRSYYTGYTK----NYIRVAIA-ADEF 418 >UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=4 Tax=Treponema RepID=MIAB_TREPS Length = 456 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 114/434 (26%), Positives = 212/434 (48%), Gaps = 35/434 (8%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 F + GC N+ +S + L G+ D++I+NTC +A +G Sbjct: 5 FETYGCQMNVAESASVEQLLLARGWTKAVDAQTCDVLIINTCSVRITAETRVFGRLGLFS 64 Query: 72 NENGK----VIVTGCLGAK-EDQIREVHPKVLEITGPHS---YEQVLEHVHHYVPKPKHN 123 + K +I+ GC+ + D+I++ P++ + G + +E + + + + + + Sbjct: 65 SLKKKRAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFESIFQEIEQKLTQKDYR 124 Query: 124 -PFLSLV----PEQGVKLTPRHYA------YLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 F+S P G + Y+ ++ I GCN+ C+FCI+P +RG +SR + Sbjct: 125 FEFISERYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSFCIVPYVRGREISRDLD 184 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAY-GVDVKHRTGFHNGEP-VKTSMVSLCEQLSKLG 230 +L E L + GV+EI ++ Q+ ++Y G D R G P + +V CE ++ Sbjct: 185 AILQEVDVLSEKGVREITLLGQNVNSYRGRD---REGNIVTFPQLLRHLVRRCEVKDQIK 241 Query: 231 IWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W R +P DD+I +A E ++ + +P+QH + +LK M+R + ++ L+ + Sbjct: 242 -WIRFVSSHPKDLSDDLIATIAQESRLCRLVHLPVQHGANGVLKRMRRSYTREQYLSLVG 300 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + + P + L + ++GFPGETEEDF+ LD ++E D + Y+P EG A PD Sbjct: 301 KLKASVPNVALSTDILIGFPGETEEDFEQTLDLMREVEFDSAFMYHYNPREGTPAYDFPD 360 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGA 409 ++P+ + R R + LQ + ++++ +VG+ + V+++ RS + E+ G Sbjct: 361 RIPDATRIARLQRVIALQMSTTLKKMRARVGKTLPVLVE--------SRSRNNPEELFGH 412 Query: 410 VYLNGETNVKPGDI 423 L GE V G + Sbjct: 413 TEL-GEMTVLEGKV 425 >UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_BACFN Length = 457 Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 127/454 (27%), Positives = 214/454 (47%), Gaps = 34/454 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N+ DSE I + ++ GY V + ++AD V +NTC D+A Q+ L Sbjct: 17 NKKLFIETYGCQMNVADSEVIASVMQMAGYSVAETLEEADAVFMNTCSIRDNAEQKILNR 76 Query: 67 IG--EALNENGKVIVTGCLGAKEDQIRE---VHPKVLEITGPHSYEQVLEHVHHY----- 116 + ++ + K ++ G LG +++++ H V + GP +Y + E + Sbjct: 77 LEFFHSMKKKKKHLIVGVLGCMAERVKDDLIEHHHVDLVVGPDAYLTLPELIASVEAGEK 136 Query: 117 ---VPKPKHNPFLSLVPEQGVKLTPRHYA-YLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 V + ++P ++ H + ++ I GCN+ CT+CI+P RG SR + Sbjct: 137 AMNVELSTTETYRDVIPS---RICGNHISGFVSIMRGCNNFCTYCIVPYTRGRERSRDVE 193 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 +L+E LV G KEI ++ Q+ ++Y R GE V M+ + GI Sbjct: 194 SILNEVADLVSKGYKEITLLGQNVNSY------RFEKEGGEVVTFPMLLRLVAEAAPGIR 247 Query: 233 TRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R +P D+ + ++A+ + ++ +P+Q S RILKLM R + + L R+ Sbjct: 248 VRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAI 307 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQ 350 + I P+ L + GF ETEED + L ++ D FKYS G A+ L D Sbjct: 308 KRIVPDCGLTTDIFSGFHSETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHLEDN 367 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEID 407 VPEE+K R N + LQ ++SAE +G+ V+++ V + GR+ E + Sbjct: 368 VPEEIKVRRLNEIIALQNRLSAESNNRCIGKTYEVLVEGVSKRSRDQLFGRT-----EQN 422 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + T+ + GD + V++ A L G V Sbjct: 423 RVVVFDRGTH-RIGDFVNVRITEASSATLKGEEV 455 >UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Opitutaceae RepID=MIAB_OPITP Length = 480 Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 117/415 (28%), Positives = 187/415 (45%), Gaps = 60/415 (14%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 ++ + GC N DSE + LR GY +V +D D++++NTC D+A Q+++ G Sbjct: 3 RVHIKTYGCQMNERDSEAVAAMLRARGYRIVADENDCDILLLNTCSVRDAAEQKAIGKAG 62 Query: 69 EALNENGK-----VIVTGCLGAKE-----DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 K + + GC+ DQ+ P V I G + QV ++ + Sbjct: 63 YLQQRKKKQPDFVLGILGCMAQNRGASLLDQL----PDVDLIVGTQKFHQVPGYLDNLRA 118 Query: 119 K-----PKHNPFLSLVPEQGVKLT------------------------------PRHYAY 143 P + + E G + T P+ A+ Sbjct: 119 ARDAGVPIGETIVDIGEEAGSQNTIKDHLLPQDSDSDSQPSTLNSQLRGAAAPPPQITAF 178 Query: 144 LKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGV-D 202 + I +GCN C FCI+P RGD SRP+ +++ E ++L GV+E+ ++ Q ++YG D Sbjct: 179 VSIQQGCNMDCAFCIVPKTRGDERSRPMDDIVRECEQLAARGVREVTLLGQIVTSYGRRD 238 Query: 203 VKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPY 259 H G + V L E++ L R+ + P+P DD++ K+ Y Sbjct: 239 YTHTNGI-------SPFVQLLERVHALDGIERIRFTSPHPRGFKDDLVAAYGRLPKLCGY 291 Query: 260 LDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQML 319 + +PLQ S RIL+ M RP + +R + R + ++ + IVGFPGET+EDF+ Sbjct: 292 VHLPLQSGSNRILRAMNRPYTRERYREIVDALRAVRSDMYFSTDVIVGFPGETDEDFEQT 351 Query: 320 LDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAER 374 + + D FKYS G A DQVPE+VKE+R ++L +Q S R Sbjct: 352 RELFEACNYDMAYVFKYSVRTGTPAAERGDQVPEDVKEQRNQLLLELLRQNSERR 406 >UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C4FYU3_ABIDE Length = 515 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 134/462 (29%), Positives = 228/462 (49%), Gaps = 46/462 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N DSE+I L G++ D VI+NTC ++A Q+ +G Sbjct: 60 TFGCQMNFRDSEKIAGILEKIGFENTED-KSPDFVILNTCTIRENADQKVYGNLGYLKKL 118 Query: 69 EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHV-----------H 114 + LN N + + GC+ + ++RE + + I G H+ ++ E V H Sbjct: 119 KELNPNMIIALCGCMMQETTVVQKLRESYSFIDLIYGTHNIYKLAELVFAMFALKSYAAH 178 Query: 115 HYVPKP-----KHNPFLSLVPEQG--VKLTP--RHYAY---LKISEGCNHRCTFCIIPSM 162 H V K KH+ + + + V+ P R Y++ + I+ GC++ CT+CI+P + Sbjct: 179 HPVKKNGKYKIKHSMLVDIWKDTDKIVEDLPDERKYSFKASVNITYGCDNFCTYCIVPYV 238 Query: 163 RGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSL 222 RG SR G+++ E K L DAGV EI+++ Q+ ++YG ++ GEPV + +L Sbjct: 239 RGRERSRRPGDIVKEVKCLADAGVIEIMLLGQNVNSYGKGLEG----EKGEPV--TFANL 292 Query: 223 CEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPG 279 + K+ R+ ++ P+P D++I ++A+ KI ++ +P Q S +L+ M R Sbjct: 293 LRMVEKVEGIKRIRFMTPHPKDFSDELIEVIADSEKICKHIHLPFQAGSNNVLRRMNRRY 352 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 + + L + + P++ L + IVGFPGETEEDF+ LD +KE R F+YS Sbjct: 353 TKESYLELAGKIKTRIPDIALTTDIIVGFPGETEEDFEDTLDVVKEVRYQSAYMFEYSKR 412 Query: 340 EGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--- 396 G A + DQV E + R+ R + + ++ KVG V+ +EV+ E + Sbjct: 413 TGTPAATMEDQVDAEAVKRRFKRLQDTVAEYADDKFGNKVGCMAEVLAEEVNSEEPLIIT 472 Query: 397 GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 GR M+D + V + + + G +L+VK+ + L G Sbjct: 473 GR-MSDNTLVHFKVPTDNKEDY-IGKLLKVKITENCRFYLMG 512 >UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridia RepID=B9MJU1_ANATD Length = 471 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 120/451 (26%), Positives = 223/451 (49%), Gaps = 40/451 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K V+ GC N+ DSE++ L GY + +AD++I NTC + A IG Sbjct: 37 KYHIVTYGCQMNVHDSEKLAGMLNAMGYIETENIQEADLIIFNTCSVREHAESRVYGNIG 96 Query: 69 --EALNENGKVIVTGCLGAKEDQIR------EVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + L E ++ G G Q+ ++ P + I G S + + ++ + + Sbjct: 97 PLKRLKEKKPDLIVGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQLLYTAITEK 156 Query: 121 KHNPFLSL---VPEQGVKLTPRH--YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K +S V +G+ R A++ I GCN+ C++CI+P +RG SR E++ Sbjct: 157 KTVIEVSEDEDVVVEGIPTARRQGVSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPEEII 216 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E ++L G+KE+ ++ Q+ ++YG D+ + F L E+++++ R+ Sbjct: 217 YEIEQLAQNGIKEVTLLGQNVNSYGKDLGNSITFP----------KLLEKVNEIKGIERI 266 Query: 236 HYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 +V +P D++I M + K+ ++ +P+Q S RILK M R + + L +++ + Sbjct: 267 RFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLK 326 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P++ + + IVGFPGET+EDF+ LD ++ D F YS G A +P+QVP Sbjct: 327 TNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVEFDSAYTFIYSKRRGTPAEKMPNQVP 386 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +++K +R+ R ++L ++I+ ++ ++ +G+ ++ID + + + G Sbjct: 387 DDIKYQRFQRLVKLVEEIALKKNRQMLGKTYEILIDSHSKRNNL---------LAGRTRT 437 Query: 413 NGETNVKPGD-----ILRVKVEHADEYDLWG 438 N NVK + + VK+ A E+ L+G Sbjct: 438 NKVVNVKCSEEFMFKFVNVKIFEAAEHWLYG 468 >UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Bacteroidetes RepID=MIAB_SALRD Length = 503 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 119/452 (26%), Positives = 219/452 (48%), Gaps = 41/452 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA---VQESLEAIGEA 70 + GC N+ DS + + L GY + AD+V++NTC ++A ++ L + Sbjct: 48 TYGCQMNVNDSGIVASVLEESGYGLTRDQAAADVVLLNTCAIRENAERKIRARLSMLRSE 107 Query: 71 LNENGKVIVTGCLGAKEDQIREVHPKVLE-------ITGPHSYEQVLEHVHHYVPKPKHN 123 + ++ G LG +++RE K+LE + GP +Y + + ++ + Sbjct: 108 KEKRDGELMLGVLGCMAERLRE---KLLEQEDLVDVVVGPDAYRDLPQLLYEADATGQAA 164 Query: 124 PFLSLVPEQGVK-LTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + L ++ + + P Y AY+ I GC++ CTFC++P RG SRP+ +LS Sbjct: 165 VNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFTRGREESRPVTTILS 224 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E RL + G KE+ ++ Q+ ++Y + + + S L +++S++ R+ Sbjct: 225 EVARLAEEGYKEVTLLGQNVNSY--------HYTDADGTSVSFAELVDRVSRVSPEMRVR 276 Query: 237 YVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 Y +P DD++ + + + Y+ +P+QH + +L M+R + + LA ++ +E Sbjct: 277 YSTSHPKDCTDDLLKVHRDRPNVCNYIHLPVQHGNTEVLDRMRRTYTREEYLALTERAKE 336 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV-EGADANALPDQVP 352 +CP ++L + I GF GETE + L ++E R D FKYS + A D VP Sbjct: 337 LCPGVSLSTDLIAGFCGETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAARKYEDDVP 396 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD---APEIDGA 409 E+ K+ R ++LQ Q + E + +VGR V++ EG +S A + + Sbjct: 397 EDTKQRRLEEIIELQNQHAKESNEAEVGRVHTVLV-----EGPSKKSDAQFFGRTDTNKG 451 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + E + + GD +RV++E L G+ + Sbjct: 452 VVFDRE-DYEKGDYVRVRIEDCTSSTLLGTAI 482 >UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Clostridia RepID=MIAB_SYMTH Length = 470 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 120/409 (29%), Positives = 203/409 (49%), Gaps = 31/409 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 P+P++ + GC N DSE + L GY DDAD+++ NTC +SAV+ + Sbjct: 18 PEPRVHIETFGCQMNEHDSEIMYGILAQMGYVKAQGPDDADLLLFNTCAVRESAVEHAFG 77 Query: 66 AIGEA-----LNENGKVIVTGCLGAKEDQ---IREVHPKVLEITGPHSYEQVLEHVHHY- 116 IG+ N + + V GC+ E Q I+ + P + I G H+ ++ E V Sbjct: 78 RIGQLKPLKYTNPDLIIGVCGCVPQVEGQVERIKRMFPYLDLIFGTHNIHRLPELVERAR 137 Query: 117 --------VPKPKHNPFLSLVP---EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 V + + F ++P E +K A++ I GC+ CT+CI+P+ RG Sbjct: 138 SERETVVDVWESMGDDFPDILPAAREGDLK------AWVTIMYGCDKHCTYCIVPTTRGK 191 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 SRP +L+E + L G KEI ++ Q+ +AYG D+ R G G ++ L ++ Sbjct: 192 ERSRPYEVILAEVQELARQGFKEITLLGQNVNAYGKDLYGRHG--EGAFDFGDLIELIDR 249 Query: 226 LSKLGIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 S R +P ++ +A K+ + +P+Q S +L+ MKR + +Q Sbjct: 250 NSPGIERIRFTTNHPKDFTRKMVEQIARAEKVCEWFHLPVQSGSDSVLRRMKRSYN-RKQ 308 Query: 285 LARIKQW-REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 R+ W RE+ P+ + + IVGFPGETEE+FQ L ++E + D F YS G Sbjct: 309 YLRLVGWIRELIPDAVITTDIIVGFPGETEEEFQETLSLVEEVQYDAAFMFMYSERAGTP 368 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE 392 A + D++ K+ER R M++Q +I+ + + +VG+ ++++ +D+ Sbjct: 369 AAQMEDRLSVPEKKERLQRLMEVQNRIARAKNEARVGKVYDILVEGLDK 417 >UniRef50_D2RJ51 RNA modification enzyme, MiaB family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJ51_ACIFE Length = 437 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 26/444 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F +LGC N D+ + R G+ +V + AD+ ++NTC + +S + I Sbjct: 3 KIAFYTLGCKVNQSDTASMEKLFRDAGFQIVDFEEPADICLINTCVVTNMGQSKSRKIIH 62 Query: 69 EALNENGK--VIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKHNP 124 A + K ++VTGC D++ + L I G +V+E V + P P Sbjct: 63 RAARRDPKPLIVVTGCYPQTSPDEVVHIDGVDL-IIGNQDRSKVVELVRERLGESPDEAP 121 Query: 125 FLSL----VPEQGVKL-----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 ++ V + +L R+ A+LKI EGC+ C +CIIP RG L SR + + Sbjct: 122 INAVHDLPVGREFEELDAAVDASRNRAFLKIQEGCDQYCAYCIIPYARGHLRSRSLDNIR 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E +L KEI++I YG ++ G H + VK ++ S Q+ +L RL Sbjct: 182 EEVAKLTAEQYKEIVLIGIHLGCYGKEIP--GGPHLSDAVKAAL-SAEPQVPRL----RL 234 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + D ++ LMA E ++ +L +PLQ L M RP + +++ R + Sbjct: 235 GSLESVEVEDALLDLMAREPRLCAHLHLPLQAGCDSTLARMHRPYDTAKFAQLLEKIRSL 294 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + + + IVGFPGETEEDFQ LDF+++ R ++ F YS +G A +PDQ+ + Sbjct: 295 VPNVAITTDVIVGFPGETEEDFQASLDFIRQCRFSKIHIFPYSQRKGTPAAVMPDQISNQ 354 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K+ER +R ++ ++ + +E++G+E V+ + ++ + + VY + Sbjct: 355 EKQERVHRLEEVDREGNLAYRKEQIGQESTVLWERRNKNNGLWEGLTPGYV---RVYADS 411 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 N+K G I V++E+ E L G Sbjct: 412 PENMK-GKISAVRLENLFEDGLKG 434 >UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Parachlamydiaceae RepID=MIAB_PARUW Length = 450 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 127/395 (32%), Positives = 200/395 (50%), Gaps = 37/395 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE-ALN 72 + GC N +DSE ++ +L G +DAD++I NTC D A ++ + +G+ L Sbjct: 23 TYGCQMNELDSEIMIGQLENRGLTRSHDENDADLLIFNTCSIRDLAERKVMGKLGKLGLT 82 Query: 73 ENGKVI--VTGCLG-AKEDQIREVHPKVLEITGP-------HSYEQVLEHVHHYVPKPKH 122 + + I VTGC+ AK+D + + P + + G H ++VL + H Sbjct: 83 KQSQAIIGVTGCMANAKKDSLFQKLPHIDFVLGTNNIHDLNHVLDEVLASGKQSIRTDDH 142 Query: 123 NPF----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F L+ E +K AY+ I GC+ CT+C++P RG VSR +L E Sbjct: 143 FEFELDYLNAKREDQIK------AYVSIIRGCDKFCTYCVVPYTRGSEVSRAPENILEEC 196 Query: 179 KRLVDAGVKEILVISQDTSAYGVD-VKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + LV+ G KEI ++ Q+ ++YG D ++ + FH+ L QL K+ R+ + Sbjct: 197 RHLVNQGYKEITLLGQNVNSYGKDKLEWKCLFHD----------LLYQLDKIPGLERVRF 246 Query: 238 VYPYPHVDDVIPLMAEGKILP----YLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + +P VD LM + L ++ PLQ S R+LK M R +V++ L +++ +E Sbjct: 247 MTSHP-VDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQMLKE 305 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 I P + L + IVGFP ETEE+FQ LKE F YSP +G A D VPE Sbjct: 306 IVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPAMRWRDDVPE 365 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 EVK++R R +QLQ I + Q +G+ + V+++ Sbjct: 366 EVKQDRLQRLLQLQDTIYMKHRQAFLGQTVEVLVE 400 >UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N968_9BACT Length = 446 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 135/459 (29%), Positives = 225/459 (49%), Gaps = 40/459 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI + GC N DSE L G+ +V S + AD+++ NTC + A ++++ IG Sbjct: 2 KIFIKTYGCQMNERDSEAFAGMLVEAGHTMVDSEEQADVLLFNTCSVREQAERKAIGKIG 61 Query: 69 EALNENGK-----VIVTGCLGAK--EDQIREV-HPKVLEITGP-HSYEQVLEHVHHYVPK 119 K + GC+ + D ++E+ H + TG H+ ++E + + Sbjct: 62 FMKKLKAKHPELIIGAMGCMAQRLGNDLLKELPHLDFVLGTGQLHTLVPLIESIRADRRQ 121 Query: 120 -PKHNPFLSLVPEQGVKLTP-----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 N +++ G P +A + I+ GCN C++CI+P +RG +SR G+ Sbjct: 122 VASLNESEAVLTGMGSHYRPAGDVRNWHAQIAITRGCNRFCSYCIVPYVRGREISRDPGD 181 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS--MVSLCEQLSKLGI 231 V+ EA+ LV AG +E++++ Q+ +AYG+ G + P S L E+L ++ Sbjct: 182 VVREARELVAAGARELMLLGQNVAAYGL------GGNTNPPEDGSSPFAELLEELDRIPE 235 Query: 232 WTRLHYVYPYPHVDD--VIPLMAEGKILPY-LDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + PYP + +I +A+ + + + + +PLQ S R+LK M R + D L + Sbjct: 236 LLRIRFTSPYPTYFNGRLIDAIAKSRTVCHNIHLPLQSGSDRMLKAMNRQYTHDSYLEVV 295 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R P++T + IVGFPGET+ DF+ + + D FKYSP GA + AL Sbjct: 296 NRIRAAMPDVTFSTDVIVGFPGETDGDFKQTREVMNTVGFDNSFIFKYSPRPGARSAALA 355 Query: 349 DQVPEEVKEERWNRFMQLQQQISAER-LQEKVG--REILVIIDEVDEEGAIGRSMADAPE 405 D VP+EVKEER N+ + ++ E L++++G +EILV EG R+ A Sbjct: 356 DSVPQEVKEER-NQILLNDLKLRVEAFLKQQIGTTQEILV-------EGVSPRNPARWCG 407 Query: 406 IDGA---VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ E ++ G + V V A L+G V Sbjct: 408 RTGTNRLIHFEPEEGLQAGTLRSVTVTRAGSVSLFGELV 446 >UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXK7_HALOH Length = 438 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 118/379 (31%), Positives = 192/379 (50%), Gaps = 28/379 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + F +LGC N ++E ++ GY VV D AD+ I+N+C + A ++S + + Sbjct: 5 VAFHTLGCKVNHYETEAMMGIFEEAGYKVVDFDDRADVYIINSCTVTNEAARKSRQLARK 64 Query: 70 ALNENGKVIVT--GCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH---- 122 A +N + +V GC D+++++ L + G + +++ V K Sbjct: 65 ARRKNPEAVVALVGCYAQVSPDEVKKIDAIDL-VLGSDRRKDIVKLVEEVRTGGKEVTDV 123 Query: 123 NPFLSLVPEQG-----VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 F L + VK T R AY+KI EGCN C++CIIP RG + SR V+ E Sbjct: 124 KDFKKLTTYEDLNINKVKETTR--AYIKIEEGCNQFCSYCIIPYARGPVRSRKEESVIQE 181 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRL 235 +RLV AGVKEI++ AYG+D E ++V L + L K+ RL Sbjct: 182 VERLVRAGVKEIVLTGTHLGAYGLD----------ENNDKALVELIQNLVKVKGLARIRL 231 Query: 236 HYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + DD+I +M +E K+ P+L +PLQ S ILK MKRP +V+ + + R+I Sbjct: 232 SSLEVTEVNDDLIRIMGSEDKVCPHLHLPLQSGSNTILKKMKRPYTVEEFKETVDKIRKI 291 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 ++ + + IVGFPGE +++F + +KE R+ F +S +G A + +QVP + Sbjct: 292 IEDIAITTDIIVGFPGEGQKEFNESYNTVKELGFSRLHVFPFSIRQGTPAARMKNQVPGD 351 Query: 355 VKEERWNRFMQLQQQISAE 373 VK+E + +L +++ E Sbjct: 352 VKKEYSKKMRELNKKLMLE 370 >UniRef50_Q8EUX4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Bacteria RepID=MIAB_MYCPE Length = 491 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 118/449 (26%), Positives = 208/449 (46%), Gaps = 39/449 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC NL D+E ++ L GY+ + +D+V++NTC + A + IG Sbjct: 60 TFGCQSNLRDTEVMMGMLELIGYEYNEDVNTSDLVLLNTCAVREHAESKVFADIGILDRI 119 Query: 69 EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 + N N V GC+ +E ++I + + V I G H+ ++L + + + N Sbjct: 120 KKSNPNFIFGVCGCMAQEEAVVNRILKSNFNVDFIFGTHNVHRILNLLEQVIFEK--NLV 177 Query: 126 LSLVPEQG-------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + +G K T ++ + GC+ CT+CI+P RG + SR ++L E Sbjct: 178 VEVWSHEGNVIENLPSKRTNNLKGFVNVMYGCDKFCTYCIVPMTRGKIRSRRKEDILDEV 237 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHY 237 +++ G KE+ +I Q+ ++YG+D F NGE + +L E ++K GI R Sbjct: 238 HQMISEGYKEVTLIGQNVNSYGID------FDNGENYLFN--NLLEDVAKTGIERVRFTT 289 Query: 238 VYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 P+ ++ M + I+P++ +P+Q ILK M RP + + + R P Sbjct: 290 SNPWNFTRSIVDTMKKYPNIMPHIHLPIQSGDETILKKMNRPMKIGDYIDLVDYIRANIP 349 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++ + IVGFP ET+E F L+ K D F YS +G A +PD++P K Sbjct: 350 NCSITTDLIVGFPNETKEQFNKTLELYKRIEFDNAFTFIYSKRDGTVAAIIPDEIPLSEK 409 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV----YL 412 +ER ++ + S + ++ V + + V++D G S D I G + Sbjct: 410 KERLQELNEMVKTFSKKNNEKYVNKVLDVLVD--------GPSKKDKTVISGYSPQWKVV 461 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 N + K G+I++V + A + L G + Sbjct: 462 NFTGSAKSGEIVKVLITSASRFTLNGKMI 490 >UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2I9_SPHTD Length = 460 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 32/440 (7%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 ++GC N +S + L GY ++AD++IVN+C +A + +G Sbjct: 27 TIGCQMNEAESAKAAAMLSQAGYLQTHLEEEADVIIVNSCVVRQAAEDKVAGKLGSLARL 86 Query: 69 EALNENGKVIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLE---HVHHYVPKPKHNP 124 + + + ++ +TGC+ +E + E P V GP +E+++E + H P Sbjct: 87 KRVRPDVRIALTGCMVTGQEQALAERFPHVDLFYGPSQFERLVEIAPELAHVDTDLAELP 146 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 G +T A++ I GCN C++CI+P RG SRP+ EV++E +RL + Sbjct: 147 HFYQPDAAGSDVT----AFVPIIYGCNFVCSYCIVPYRRGRERSRPMAEVIAEVERLAER 202 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV 244 GVKE+ ++ Q +AYG D+ P + L ++++ R+ ++ +P Sbjct: 203 GVKEVTLLGQTVNAYGHDL----------PGSPDLADLLTAVNEIPGIERIRFLTSHPKY 252 Query: 245 --DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D ++ +A K ++++P+Q +L+ M+R +VD RI RE P +T+ Sbjct: 253 MSDRIVQAVATLPKACEHINLPVQAGDDEVLRRMRRTYTVDFYRERIAYIRETIPGVTVS 312 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + IVGFPGETEE FQ LD L E RLD+V YSP + D +P + K R Sbjct: 313 TDIIVGFPGETEEQFQRTLDLLAELRLDKVHVAMYSPRPRTLSARWEDDIPWDEKRRRHQ 372 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 +LQ QI ER + +G +++D + + GR+ + V+ + K G Sbjct: 373 AVEKLQAQILGERNRGYLGATFEILVDGMAKGRWRGRTRG-----NDLVFFEAPGDWK-G 426 Query: 422 DILRVKVEHADEYDLWGSRV 441 + V++ A + L G V Sbjct: 427 KFVDVRITEASPWYLLGEPV 446 >UniRef50_B1I695 MiaB-like tRNA modifying enzyme n=6 Tax=Clostridia RepID=B1I695_DESAP Length = 450 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 130/449 (28%), Positives = 207/449 (46%), Gaps = 34/449 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F +LGC N +++ + R GY V+P + AD+ +VNTC ++S + + Sbjct: 3 KVAFYTLGCKVNQAETQGLAALFRDRGYKVIPFEETADVYVVNTCTVTREGDRKSRQVVR 62 Query: 69 EALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY-----VPKPK 121 A+ N V+VTGC + P V + G E++++ V VP K Sbjct: 63 RAVRANPEALVVVTGCYAQVAPEEAGAIPGVSLVIGTSGRERIVDLVEQAAARCPVPAEK 122 Query: 122 HNP--FLSLVP-EQ--------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 P FL++ EQ G R A++K+ EGC CT+CI+P RG L SRP Sbjct: 123 KGPGPFLAVGDIEQAREFEDLPGTADPGRTRAFIKVQEGCRDFCTYCIVPYARGPLRSRP 182 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 VL A+ LVD G E+++ + AYG D+ G N + +V + L++L Sbjct: 183 PERVLELARGLVDRGYSELVLTGVNLGAYGRDL----GTENLPGLVRRLVRI-PGLARL- 236 Query: 231 IWTRLHYVYPYPHVDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 RL V P +++ +AE + P+ IPLQ S +L M R S + Sbjct: 237 ---RLSSVEPNEITRELVEAVAENPVCAPHFHIPLQSGSDSVLSRMGRRYSTGEFTGLVD 293 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R PE+ + + +VGFPGET + + L++++ + F YSP G A + PD Sbjct: 294 MVRARVPEVAVTADVMVGFPGETAAEHRESLEYVRRIGFAGLHVFVYSPRRGTPAASFPD 353 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGA 409 VP VK+ER + L +++ GR + V+++ V A G + P Sbjct: 354 PVPYRVKKERSREMLALGRELRDRFASRYRGRTVEVLVESVSGGVASGYT----PNYLRV 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 + NG G I++V + A++ +L G Sbjct: 410 FFKNGPELA--GRIVKVYADGAEQGNLRG 436 >UniRef50_A3DNI7 RNA modification enzyme, MiaB family n=10 Tax=Thermoprotei RepID=A3DNI7_STAMF Length = 429 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 128/445 (28%), Positives = 218/445 (48%), Gaps = 39/445 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI + GC N D + T L + G+ +V +AD +I+NTC + ++ I Sbjct: 4 KIYIETYGCALNRGDEYIMKTVLVSRGHKLVEEITEADTIIINTCTVRYDTELKMIKRIK 63 Query: 69 E----ALNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 E A +N K+I+ GC+ A+ +I ++ PK + P + ++ ++ Sbjct: 64 ELYRIASEQNKKLIIAGCMAKAQPYKIHKIAPKT-SLVSPQNAPKI------WIAVESDG 116 Query: 124 PFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 L E+ ++ + AYL I EGC C+FCI+ + R LVS PI ++ + K Sbjct: 117 QVFLLKGERNRRILGTYVDKQIAYLPIQEGCLGNCSFCIVKNARRQLVSYPINKIKNTVK 176 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS--KLGIWTRLHY 237 LV GV EI + QDT++YG+D+ + N L E+L K R+ Sbjct: 177 ELVGKGVVEIEITGQDTASYGLDLYGKQMLPN----------LLEELDGIKGNFMIRIGM 226 Query: 238 VYP---YPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + P +D++I ++ I +L IPLQ S ++L++M+R +VD +K R+ Sbjct: 227 MNPDTLANILDELIEVIKNSAHIYRFLHIPLQSGSDKVLRIMRRKYTVDEYREIVKILRK 286 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 PE+++ + IVG PGE EEDF+ LD +KE + +RV YS + +A Q+P Sbjct: 287 KIPEISIATDIIVGHPGEEEEDFEQTLDIIKELKFERVHPAVYS-IRPNTYSASLRQIPT 345 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 VK+ER R +++ + + E ++ +G+ + I E IGR++ P V + Sbjct: 346 SVKKERMLRLLKIIENVGLEVHRKYLGKVLDTFITE-HSNTWIGRTLNYIP-----VIIF 399 Query: 414 GETNVKPGDILRVKVEHADEYDLWG 438 E + G +++++ +A YDL G Sbjct: 400 SENTLDFGKHVKIQITNATFYDLRG 424 >UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=18 Tax=Clostridia RepID=MIAB_ALKMQ Length = 476 Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 123/447 (27%), Positives = 221/447 (49%), Gaps = 39/447 (8%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALN 72 V+ GC N DSE++ L+ GY ++A+++I NTC ++A + IG N Sbjct: 44 VTYGCQMNEHDSEKLAGILQNIGYIETNDKNEANLIIYNTCCVRENAELKVYGNIGSLKN 103 Query: 73 -----ENGKVIVTGCLGAKEDQIREVHPK---VLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + + V GC+ + ++E+ K V + G H+ + E + N Sbjct: 104 LKKEKHDLTIAVCGCMMQQPHVVKEIKSKYRHVDLVFGTHNLHKFPELLS--TSMESDNM 161 Query: 125 FLSLVPEQG--VKLTP--RHY---AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + ++G V+ P R Y A++ I GCN+ CT+CI+P RG SR + E++ E Sbjct: 162 IIDVWDKEGDIVEGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRERSREVQEIIDE 221 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + L G KEI ++ Q+ ++YG ++ T F N L + L+K+ R+ + Sbjct: 222 VEELAKNGTKEITLLGQNVNSYGKTLEEETDFGN----------LLKVLNKIEGIERIRF 271 Query: 238 VYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + +P D +I M K+ +L +P Q S ILK M R + + L +++ R Sbjct: 272 MTSHPKDLSDSLISAMTVCTKVCAHLHLPFQAGSNDILKAMNRKYTKEAYLELVEKVRSK 331 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + L + IVGFPGETE+DF+ L+ +++AR + + YS + A + + VP++ Sbjct: 332 VPNVALTTDIIVGFPGETEDDFKETLNVVEKARFNSAYTYLYSLRQETPAAKMENHVPDD 391 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEIDGAVY 411 VK ER+NR ++ +IS E + + + + V+++ + D+ +GR+ P+ + Sbjct: 392 VKHERFNRLIEAVNRISGEINKAYLNKVVEVLVEGTSKTDDAKLMGRT----PQSKLVNF 447 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWG 438 + ++ G I+RVK+ + L G Sbjct: 448 AGNKEDI--GQIVRVKITEPKTFSLNG 472 >UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF04_CARHZ Length = 434 Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 122/397 (30%), Positives = 201/397 (50%), Gaps = 20/397 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F +LGC N ++E + +GY++V D AD+ ++NTC + ++S + I Sbjct: 3 KVAFYTLGCKVNQYETEALKGAFLEKGYEIVDFSDYADIYVINTCTVTHLSDRKSRQMIR 62 Query: 69 EALNENGKVIVT--GCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKHNP 124 +A+ +N + +V GC ++I ++ P+V + G +++E V + + K N Sbjct: 63 KAVQKNPRAVVAAVGCYAQVAPEEILKI-PEVNLVLGTVHKNRLVELVEKVLRERTKINA 121 Query: 125 FLSLVPEQG-----VKLTP-RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 S +KL P + A++KI EGCN C +CIIP RG L SRP+ +V++E Sbjct: 122 VASFEELLEFEEMPLKLAPGKARAFVKIQEGCNSYCAYCIIPYARGPLRSRPLEDVVAEV 181 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 K+L +G EI++ T AYG + P +V+ ++ +L RL + Sbjct: 182 KKLCQSGFSEIVLTGIHTGAYGQE-------KQDLPKLADLVAELFKIPELK-RLRLSSI 233 Query: 239 YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P +++ ++A K +L +PLQ ILK M+R + L I+ RE P+ Sbjct: 234 EPQDFTVELLDVLANSPKFCRHLHLPLQSGDDDILKAMRRKYTSYEYLRLIETIRERIPD 293 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + L S IVGFPGETEE F + +K+ + FKYSP G A +P Q+PE KE Sbjct: 294 IALTSDVIVGFPGETEEQFLNTYNLVKKVGFMDIHVFKYSPRAGTPAAKMPGQIPEREKE 353 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 R + L++++ + +G+ + VI +E D EG Sbjct: 354 RRSLLLLNLKEELFKNYASKFLGKILEVIPEEQDTEG 390 >UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 n=2 Tax=environmental samples RepID=B3TCC0_9ARCH Length = 472 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 216/448 (48%), Gaps = 36/448 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N+ D++R+ L GY +DAD+++VNTC + A Q++ G Sbjct: 29 TFGCQMNVADTDRMELVLFHSGYQRTLEKEDADLILVNTCSIREKAEQKTFSLFGGLKPL 88 Query: 69 EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + N + + +TGCLG +E +++ + P + + GP E + + V K + Sbjct: 89 KMANPDLILGLTGCLGQQEGEKLLKRMPYLDFVIGPDQVEGIAQAVDRVRNTGKTFVWTG 148 Query: 128 L-------VPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 +PE L P A++ I +GC+ CTFC++P RG SR E+ E Sbjct: 149 FDQEKVYSIPELSRDLPKAPGPSAFVNIIKGCDKFCTFCVVPFTRGREKSREPEELFEEI 208 Query: 179 KRLVDAGVKEILVISQDTSAYGV-DVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + LV+ G KEI+++ Q+ ++YG +K FH L ++++ RL + Sbjct: 209 RHLVNHGAKEIILLGQNVNSYGKRGLKKPVPFH----------ELLYGIAEIPGVQRLRF 258 Query: 238 VYPYPH--VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P+ D I + IL +L +P+Q + ++LK M+R +++ L + + + Sbjct: 259 TTSHPNDFTRDTIRAYRDLDILMNHLHLPVQSGNNQMLKAMRRDHTIEEYLDLLAELKSE 318 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P ++L + IVGFPGET+E F L ++E F YSP G AN L D VPEE Sbjct: 319 VPGISLSTDIIVGFPGETDEAFGDTLKIMEEVGYSSSFMFAYSPRPGTPANELSDSVPEE 378 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIID-EVDEEGAI--GRSMADAPEIDGAVY 411 K+ R + LQ + + ++ Q +G+ + V+I+ + G + GR+ P+ Sbjct: 379 TKKRRLQEIIALQSRQTKQQGQSFIGKNVEVLIEGRSSKPGYVYKGRN----PQYWNVNI 434 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGS 439 GE ++ G+ + V V+ + L G+ Sbjct: 435 QGGEGILQAGETVTVLVKQVSGHSLNGT 462 >UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae RepID=CK5P1_ARATH Length = 640 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 136/495 (27%), Positives = 232/495 (46%), Gaps = 61/495 (12%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAV 60 S + + +I + GC N+ D E +L ++ GY +VV + A+++ VNTC ++A Sbjct: 123 SDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAE 182 Query: 61 QESLE----------------AIGEALN-ENGKVIVTGCLGAK-EDQIREVHPKVLEITG 102 Q + A G A + + KV+V GC+ + +D+I + V + G Sbjct: 183 QRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCG 242 Query: 103 PHSYE---QVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRH------YAYLKISEGCNHR 153 P +Y ++LE V + + N LSL E ++P A++ + GCN+ Sbjct: 243 PDAYRDLPRLLEEVDY--GQKGINTLLSL-EETYADISPVRISENSITAFVSVMRGCNNM 299 Query: 154 CTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAY---------GVDVK 204 C FCI+P RG SRP+ ++ E L ++GVKE+ ++ Q+ ++Y G + + Sbjct: 300 CAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESGANWE 359 Query: 205 HRTGFHNGEPVKTSMVSLCEQLSKLGI---WTRLHYVYPYP--HVDDVIPLMAE-GKILP 258 + GF + VK + + L +L + R + P+P + D+++ LM + I Sbjct: 360 YSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICN 419 Query: 259 YLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQM 318 + +P Q + RIL+ M+R + + L +K+ R I P++ + S FI GF GETEE+ Q Sbjct: 420 LIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQE 479 Query: 319 LLDFLKEARLDRVGCFKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQE 377 L ++ D F YS E A+ D VPEEVK+ R + ++ + Sbjct: 480 TLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDS 539 Query: 378 KVGREILVIID----EVDEEGAIGR-------SMADAPEIDGAVYLNGE---TNVKPGDI 423 +VG LV+++ E IG+ S P D A L+G+ N GD Sbjct: 540 QVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDF 599 Query: 424 LRVKVEHADEYDLWG 438 + V++E + L+G Sbjct: 600 VEVQIEKSTRASLFG 614 >UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=51 Tax=Epsilonproteobacteria RepID=MIAB_HELAH Length = 439 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 118/418 (28%), Positives = 210/418 (50%), Gaps = 48/418 (11%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ ++GC N DSE +L+EL Y AD++++NTC + ++ IG Sbjct: 3 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKIADLILINTCSVREKPERKLFSEIG 62 Query: 69 EALN---ENGKVIVTGC----LGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + N K+ V GC +GA I + P V + G + ++ + +H K K Sbjct: 63 QFAKIKKPNAKIGVCGCTASHMGA---DILKKSPSVSFVLGARNVSKISQVIH----KEK 115 Query: 122 HNPFLSLVPEQGVKLTPRHYAY------------LKISEGCNHRCTFCIIPSMRGDLVSR 169 E + YA+ L IS GC+ +CT+CI+P RG +S Sbjct: 116 -------AVEVAIDYDESSYAFEFFEKKAEVRSLLNISIGCDKKCTYCIVPHTRGKEISI 168 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ +L EA++L + G KE++++ Q+ + YGV + E K + L ++LS++ Sbjct: 169 PMDLILKEAEKLANNGTKELMLLGQNVNNYGVRF-------SSEHAKVNFSDLLDKLSEI 221 Query: 230 GIWTRLHYVYPYP-HVDD-VIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 R+ + P+P H++D + A+ K+ + +PLQ S +LK+M+R + + L Sbjct: 222 PGIERIRFTSPHPLHMNDEFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYNKEWFLN 281 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 R+++ + + PE+ + + IVGFP E+++DF+ ++ L++ D + F YSP +A A Sbjct: 282 RVEKLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVCFDTLYSFIYSPRPFTEAGA 341 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEE--GAIGRS 399 ++VP EV R R ++I E+ + +VG+ +V+++ EVD + G GRS Sbjct: 342 WKERVPLEVSSLRLERLQNRHKEILEEKARLEVGKTHVVLVENRHEVDGQIVGFEGRS 399 >UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EE1 Length = 456 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 106/399 (26%), Positives = 197/399 (49%), Gaps = 31/399 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK S GC +++ D E+I L G ++ADM+I+NTC ++A + Sbjct: 20 PKAYVRSFGCQQSVSDGEKIKGLLGLMGCSFTEDENEADMIILNTCAVRENAEDRVFGIV 79 Query: 68 G-----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITG-------PHSYEQVLEH 112 G + L + + + GC+ A+ ++I++ +P+V + G PH + L Sbjct: 80 GSMKKLKELKPSLIIGIAGCMTAQSHVAEKIKKSYPQVDFVMGTSAISSLPHLLLECLNG 139 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 +++ F ++VP+ A + + GCN+ CT+CI+P +RG SR Sbjct: 140 AKFSADISEYDDFSAVVPQI---RDSSFKASVPVMFGCNNFCTYCIVPYVRGRERSRQPQ 196 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--G 230 ++++E + LV G KEI+++ Q+ ++YG D+++ F L +L K+ Sbjct: 197 DIINEVRGLVRDGYKEIMLLGQNVNSYGKDLENGMTFPQ----------LLRELDKIEGD 246 Query: 231 IWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W R +P + + + K+ +L +P+Q S +L+ M R +V++ + + Sbjct: 247 FWIRFMSSHPKDATKKLADAIFDCTKVAKHLHLPVQSGSNDVLRRMNRRYTVEKYMETVD 306 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R+ P+ +L + IVGFP E +EDF+ LD ++ + D + F YS G A + D Sbjct: 307 YIRQRDPDFSLTTDLIVGFPDEKDEDFEATLDIIRRVKYDNIYSFIYSKRTGTKAAEMDD 366 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 + +E K R R +++Q++IS+E + +GR + V+ D Sbjct: 367 PITDEEKGMRMRRLLEVQREISSEHYKRFIGRTMRVLAD 405 >UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=MIAB_DICT6 Length = 440 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 122/451 (27%), Positives = 216/451 (47%), Gaps = 40/451 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK ++ GC N DSE++ L GY ++AD++++NTC + A ++ + Sbjct: 2 PKYYIITYGCQMNKSDSEKVAGILENLGYTPSEKMEEADIILLNTCSVRERAEEKVFGKL 61 Query: 68 GE-----ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQ---VLEHVH---- 114 GE N+N + + GC+ + ++++ E P V + G + + + +LE + Sbjct: 62 GELRKLKKRNQNLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKILESLDGKKK 121 Query: 115 ----HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 +P P+ F + +K + A++ I GCN+ CT+CI+P +RG SR Sbjct: 122 VVLAEDIPSPQDVDF------RVIKRENKFQAWIPIIYGCNNFCTYCIVPYLRGREKSRD 175 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 E++ E + L GV E+ ++ Q+ +YG D+ + + L ++ ++ Sbjct: 176 PEEIIREVEYLASQGVVEVTLLGQNVDSYGKDLGN-----------VDLADLLVEIHRIP 224 Query: 231 IWTRLHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 R+ ++ +P D +I ++A K+ P+ +PLQ S RIL+ M R + A Sbjct: 225 RIKRIRFLTSHPRDVSDKLIRVVATHPKVCPHWHLPLQAGSDRILRRMGRGYTYSEYKAL 284 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 I++ R P+ + + IVGFPGE EEDF L+E + D V YS G A Sbjct: 285 IEKIRAEIPKASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAANY 344 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 D +P E K+ ++ LQ++I E+ +VG+E +V+ +EV+ + R ++ E Sbjct: 345 EDLIPYETKKRWFDELENLQRKIIYEKNLSRVGKEEIVLAEEVNPKNP--RELSGRTENY 402 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 V+ E + G L VK+ A + L G Sbjct: 403 RLVFFEAEKEL-IGKFLLVKITEARLWSLKG 432 >UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Coriobacteriaceae RepID=C8WHJ1_EGGLE Length = 459 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 138/467 (29%), Positives = 220/467 (47%), Gaps = 55/467 (11%) Query: 5 TPQPKIGFV--SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 TP + F + GC N DSERI L G V + +DAD+V TC ++A Sbjct: 3 TPFTNLTFCIRTFGCQMNKHDSERIAGMLEGMGALQVDAIEDADVVAFMTCCVREAADTR 62 Query: 63 SLEAIGEALN---------ENGKVIVTGCLGAKEDQIREVHPKVLEIT-GPHSY------ 106 + N V V GC+G ++ + K L++ G H+ Sbjct: 63 LYGQVASLKNVPLRAGTPLSKRIVAVGGCIGQRDGEKLVDELKHLDVVFGTHNLGSLPRL 122 Query: 107 -EQVLEHVHHYVPK-PKHNPFLSLVPEQGVKLTPRHY---AYLKISEGCNHRCTFCIIPS 161 E LE H V + F + +P T R + A+L I+ GCN+ C++CI+P Sbjct: 123 LEAALEEGSHQVEVLDAASSFPTELP------TAREHEWAAWLPITIGCNNFCSYCIVPY 176 Query: 162 MRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVS 221 +RG SRP+ ++++EA+R V AGVKEI ++ Q+ ++YG D+ G P Sbjct: 177 VRGREKSRPLEDIVAEAERYVAAGVKEITLLGQNVNSYGRDLY-------GSP---RFAQ 226 Query: 222 LCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRP 278 + + L + GI RL + +P D+V+ A + ++P L +P+Q S +L M R Sbjct: 227 VLDALDQTGI-ERLRFATSHPKDLNDEVVGRFATLRSLMPALHLPVQSGSDAVLAAMNRR 285 Query: 279 GSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSP 338 + D A + + R+ P++ L + IVGFPGET +DF+ + E +V F YS Sbjct: 286 YTRDHYRALVAKLRDAVPDIALSTDIIVGFPGETAKDFEDTYRLVDEVGYHQVFTFIYSK 345 Query: 339 VEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGR 398 EG A ++ D P EV ++R++R + L QQ + E Q +G + V++ EGA R Sbjct: 346 REGTPAASMDDDTPREVIQQRFDRLVDLVQQRAFEANQRDLGSTVDVLV-----EGASKR 400 Query: 399 S---MADAPEIDGAVYLNGETNVK----PGDILRVKVEHADEYDLWG 438 +A + V+ V+ G +RV+V+ A + L G Sbjct: 401 DERLLAGKSPKNQTVHAPAPAGVRAEDLAGSTVRVRVDEAKTWYLAG 447 >UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG09_SEBTE Length = 445 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 23/396 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + K ++ GC N+ +S ++ L++ GY +V +D+V++NTC + A + Sbjct: 9 EKKATIITYGCQMNVNESAKMKKMLQSIGYKIVDDIKISDLVLLNTCTVREGAAVKVYGK 68 Query: 67 IGE--ALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 +GE L E ++ G G ++RE K Q + + + K + Sbjct: 69 LGELKKLKEKRNNMIIGVTGCLAQEVREEFIKRTPFVDLVIGNQNIAKLPDIIEKIQKGT 128 Query: 125 FLSLVPEQGVKLTPRHY---------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 +V + P+ A + I+ GCN+ CTFCI+P +RG S P+ E+L Sbjct: 129 VDHIVMVEDEDELPKRVDADFGDDIVASVSITYGCNNYCTFCIVPYVRGMERSVPMREIL 188 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 + K+ D G KEIL + Q+ ++YG D G K + + + W L Sbjct: 189 DDVKQYADKGYKEILFLGQNVNSYGSDRIEMGEDFAGLLTKAANI-------EGDFW--L 239 Query: 236 HYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 Y+ P+P D VI +AE K+ L +PLQ S +IL M R + + + + + Sbjct: 240 KYISPHPKDFTDSVIKAIAENPKVARMLHLPLQSGSTKILGAMNRGYTKEEFIELALKIK 299 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P++ + + IVGFPGET+EDFQ LD +++ + F YS G A L +QVP Sbjct: 300 KEIPDIGITTDIIVGFPGETDEDFQDTLDVVEQVGFENAFMFMYSKRSGTPAAVLEEQVP 359 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 E+VK+ER + M+LQ + E ++ G+ + V+++ Sbjct: 360 EQVKKERLQQLMRLQNARAKEESKKYYGQTLKVLVE 395 >UniRef50_Q7VGP6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Campylobacterales RepID=MIAB_HELHP Length = 462 Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 124/453 (27%), Positives = 216/453 (47%), Gaps = 45/453 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEG-YDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ +LGC N DS ++ ELR + Y + AD++++NTC + ++ I Sbjct: 2 KLFIQTLGCAMNERDSAHMIAELRDKKHYTLTNDIKQADLILINTCSVREKPEKKLFSEI 61 Query: 68 GEALNEN---GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 G E K+ V GC + ++I + P V + G + ++ + + +PK Sbjct: 62 GAFAKEKKAGAKIGVCGCTASHLGEEIIKKAPSVDFVLGARNVSKITQ----VLERPKAV 117 Query: 122 ------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + QG+ + A+L IS GC+ +C++CI+P RG +S P ++ Sbjct: 118 EVDIDYDDSTYVFASSQGMGIK----AHLNISIGCDKKCSYCIVPFTRGKEISVPKDLLI 173 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 SEAK+ V +G KE+L++ Q+ + YGV H P KT+ L LS++ R+ Sbjct: 174 SEAKKCVASGAKELLLLGQNVNNYGVRFSH------SHP-KTNFTQLLRALSEIDGLYRI 226 Query: 236 HYVYPYP-HVDDVI-------PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 + P+P H+DD P++A+G + IPLQ S +ILK+M+R L R Sbjct: 227 RFTSPHPLHMDDEFLEEFASNPVIAKG-----IHIPLQSGSSQILKMMRRGYDKQWYLNR 281 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 I + + + P + + + IVGFP E+E+DF+ ++ L D + F YSP A Sbjct: 282 IAKLKSLVPNVGIGTDIIVGFPTESEQDFEDTMEVLSLVEFDTLYSFVYSPRPHTSAFEY 341 Query: 348 PDQ--VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE 405 V EV +ER R L ++I +++ Q ++GR V+I+ + G+ ++ Sbjct: 342 DKSMLVSPEVAKERLARLQNLHKEILSKKAQLEIGRIHNVLIE--NHYNGEGQCWSEGRS 399 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 + + + G I++V++ H + L G Sbjct: 400 SSNKLIKILDKKCEIGSIVKVEITHNEGGGLMG 432 >UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostridiales RepID=A9KKS8_CLOPH Length = 466 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 115/399 (28%), Positives = 199/399 (49%), Gaps = 24/399 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F++LGC N ++E + G +V + +D+ +VNTC + A ++S + + Sbjct: 22 KVAFLTLGCKVNSYETEAMQQLFLDAGATIVDFEELSDIYVVNTCTVTNIADRKSRQMLH 81 Query: 69 EAL--NENGKVIVTGCL--GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 +A N N VI GC AKE + + V + G + +++ V Y + Sbjct: 82 KAKKNNPNSVVIAVGCYVQAAKEALLED--DTVDLVIGNNKKNEIVSLVDEYYDNQSNYA 139 Query: 125 FLSL-----VPEQGVK-LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + E + +T + AY+KI +GCN C++CIIP RG + SR E+ E Sbjct: 140 VIDIDNDFEYEELAIAAVTEKTRAYIKIQDGCNQFCSYCIIPYARGRIRSRSEEEIKKEV 199 Query: 179 KRLVDAGVKEILVISQDTSAYGVD---VKHRTGF--HNG-EPVKTSMVSLCE--QLSKLG 230 RLV+ G +EI++ S+YG++ VK + NG P+ T ++SL E L+++ Sbjct: 200 MRLVENGYQEIVLTGIHLSSYGLETLSVKEQAALLPENGISPLMTLILSLSEIEGLNRI- 258 Query: 231 IWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 RL + P ++ + +A K+ P+ + LQ L M R + D R + Sbjct: 259 ---RLSSLEPRIITEEFVKTLARSKLCPHFHLSLQSGCKETLVRMNRKYTPDDYYKRCEI 315 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R + + IVGFPGETEE+F+ FL++ + ++ FKYS +G A A+P+Q Sbjct: 316 IRTYYENPAITTDVIVGFPGETEEEFEDTKAFLEKVQFSQMHIFKYSKRKGTKAEAMPNQ 375 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 VPE++K +R ++++ A+ L +G +V+ +E Sbjct: 376 VPEQIKSKRSENLFDSEKKMRAKYLDSFIGINEIVLTEE 414 >UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Cystobacterineae RepID=MIAB_ANASK Length = 464 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 115/403 (28%), Positives = 197/403 (48%), Gaps = 40/403 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG---EA 70 + GC N DS+R++ L Y S D+AD++++NTC + A Q+ L A+G E Sbjct: 33 TFGCQMNESDSDRMVELLGRHAYARAASADEADLILLNTCAVREKAEQKLLSALGRYREV 92 Query: 71 LNENGKVI-VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK--------- 119 G +I V+GC+ +E D++ P V + GP + ++ E V + Sbjct: 93 KARRGALIAVSGCVAQQEKDRLLARVPYVDFVFGPDNIGRLPEMVERARDERFAETGWMD 152 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + F PE R A++ +GC++ C FCI+P RG VSRP +V++E Sbjct: 153 SEEYVFPRADPEAA---RGRVTAFVTAMKGCDNVCAFCIVPHTRGREVSRPFPDVVAECA 209 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 L GV+E+ +I Q+ ++Y TG + L +++ + R+ + Sbjct: 210 ALAGVGVREVTLIGQNVNSY-------TG-------GCTFADLLRRVAAVPGIDRIRFTT 255 Query: 240 PYPH--VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +PH D ++ + E K++P+ +P+Q S +L+ M+R SV L R + R P Sbjct: 256 SHPHDLSDALVEVFRDEPKVMPHFHLPVQSGSDAVLRRMRRDYSVAEYLDRFDRLRAARP 315 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSP----VEGADANALPD--Q 350 + + + FIVGFPGET+ DF+ L L+ AR ++ F +SP V + P+ Sbjct: 316 GIAITTDFIVGFPGETDADFEASLALLERARFEQSFSFVFSPRPHTVAAVRLGSAPEWRD 375 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE 393 VP E R R + Q++I+ E L ++G+ + V+++ +E Sbjct: 376 VPREAAVARLERLLAAQRRIAGEILAGELGKVVEVLVEGPSDE 418 >UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacillus RepID=D2LS97_BACS4 Length = 516 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 125/466 (26%), Positives = 213/466 (45%), Gaps = 53/466 (11%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + K + GC N DSE + L G++ + DDAD++++NTC ++A Sbjct: 66 MQAIGKGKKFLIRTYGCQMNEHDSENMAGILLNMGFESTSNSDDADVILLNTCAIRENAE 125 Query: 61 QESLEAIGEALNENGK-----VIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEH 112 + IG + V V GC+ +E ++I + H V I G H+ Sbjct: 126 NKVFGEIGHLKTMKRERPELIVGVCGCMSQEESVVNRILQKHQHVDLIFGTHNI------ 179 Query: 113 VHHYVPKPKHNPFLS------LVPEQG--VKLTPRH-----YAYLKISEGCNHRCTFCII 159 H +P N + + ++G ++ PR ++ I GC+ CT+CI+ Sbjct: 180 --HRLPTLLKNAIFNKEMVVEVWSKEGDIIENMPRARKGQIQGWVNIMYGCDKFCTYCIV 237 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 P RG SR +++ E + L G KEI ++ Q+ +AYG D+ + + Sbjct: 238 PYTRGKERSRRPEDIIEEVRHLARNGYKEITLLGQNVNAYGKDLV---------DMDYGL 288 Query: 220 VSLCEQLSKLGI-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKR 277 L +++ K+ I R +P D +I ++A+G ++ ++ +P+Q + +LKLM R Sbjct: 289 GDLMDEIRKIDIPRVRFTTSHPKDFDDHLIEVLAKGGNLVEHIHLPVQSGNSDVLKLMAR 348 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 + + + K+ +E P + + IVGFP ET+ F+ L ++E D + YS Sbjct: 349 KYTREEYVTLAKKIKEAIPHASFTTDIIVGFPNETDAQFEDTLSLVREMEYDSAYTYVYS 408 Query: 338 PVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIG 397 P EG A + D +P EVK+ER R L +ISAE+ + GR + V+++ G Sbjct: 409 PREGTPAAKMNDNIPMEVKKERLQRLNALVNEISAEKNKSYQGRVVEVLVE--------G 460 Query: 398 RSMADAPEIDGAVYLNGETNVKP-----GDILRVKVEHADEYDLWG 438 S + + G N N K G+I+ VK+ A + L G Sbjct: 461 ESKKNPDILAGRTRTNRLVNFKGAKSSIGEIVYVKITEAKSWSLDG 506 >UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8D6_GEMAT Length = 451 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 121/444 (27%), Positives = 217/444 (48%), Gaps = 42/444 (9%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 +T +P + + GC N+ DSE + +L GY+ V + D AD+++VNTC ++A Sbjct: 1 MTKKPTVYIETYGCQMNVADSELMYGKLVAHGYEPVDAPDGADVILVNTCAIRENAETRV 60 Query: 64 LEAIGEA---LNENGKVIVTGCLGAKEDQIREVHPKVLE-------ITGPHSYEQVLEHV 113 + +GE + + V VTGC+ + + P+VLE + GP Y + + Sbjct: 61 IGRLGELRRYMKPDTIVGVTGCMAQR------LGPRVLEQARHVSLVVGPDGYRALPALL 114 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPRHY----AYLKISEGCNHRCTFCIIPSMRGDLVSR 169 K + E + R + A++ + GC++RCT+CI+P RG SR Sbjct: 115 DGARRGEKFTATDFDLEEHYEDVVARRFEGVKAWIPVQRGCDYRCTYCIVPFTRGPERSR 174 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 + +V+ E +++V+ G+ E++++ Q ++Y G H+ L + + Sbjct: 175 KLDDVVREVQQVVEQGLSEVVLLGQTVNSYT------DGTHD-------FADLLRAVGAV 221 Query: 230 GIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 R+ Y P+P+ D VI MA + ++ +P+Q S +LK M R S + L Sbjct: 222 DGIRRVRYTSPHPNDFSDRVIDAMASVATVCEHIHLPMQSGSTSMLKRMLRRYSREEYLD 281 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R P L+L + IVGFPGET+ +F+ L +E R D FK+SP EG A Sbjct: 282 CVARMRAAIPGLSLTTDIIVGFPGETDAEFEDTLSLCQEVRFDDAFMFKFSPREGTPATR 341 Query: 347 LPDQ--VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAP 404 +P +P++V R++R ++ + IS E +++G + V+I+++ +G + ++ + Sbjct: 342 MPADWTIPDDVMAARFDRLVKTVRGISRENNLKRLGDTVEVLIEKLARDGELWQARSR-- 399 Query: 405 EIDGAVYLNGETNVKPGDILRVKV 428 D + K GD LRV++ Sbjct: 400 --DFKTVMVPADAGKIGDYLRVQL 421 >UniRef50_C7MNF9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=2 Tax=Coriobacteriaceae RepID=C7MNF9_CRYCD Length = 448 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 128/467 (27%), Positives = 217/467 (46%), Gaps = 65/467 (13%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + GC N DSERI L + G V S +AD I TC + A + + + Sbjct: 7 FSITTFGCQMNKHDSERIAGLLESLGSIAVSSPAEADFSIFMTCCVREKADERLMGQVAT 66 Query: 70 ALNENGK---------VIVTGCLGAKE-DQIREVHPKVLEITGPHSYE---QVLEHV--- 113 N+ + V + GC+G ++ +++ V + G H+ E Q+LE Sbjct: 67 MKNDAPRKGSPFGRRFVAIGGCIGQRDGEKLLTQLDNVDVVFGTHNMETLPQLLESAIEK 126 Query: 114 --------------HHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCII 159 H +P+ + +P+ A+L I+ GCN+ CTFCI+ Sbjct: 127 GSRRAEIIDGRAEFHDELPEDREHPWA---------------AWLPITVGCNNFCTFCIV 171 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 P +RG +SRP+ E+ +A+ V GVKEI ++ Q+ ++YG D+ F Sbjct: 172 PYVRGREISRPLDEIADQARAYVQQGVKEITLLGQNVNSYGRDLYGSPRFD--------- 222 Query: 220 VSLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMK 276 ++ + ++ GI R+ + +P D VI A ++P L +P Q S RIL M Sbjct: 223 -AVLDAVAASGI-ERIRFATSHPKDLTDGVIERFATLPNLMPALHLPAQSGSNRILAAMN 280 Query: 277 RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKY 336 R +++ I++ R + P + L + IVGFPGETE+DF+ + +K ++V F Y Sbjct: 281 RRYTIEHYEGLIEKLRVVRPYIALSTDIIVGFPGETEDDFEQTCELVKRVGYNQVFTFIY 340 Query: 337 SPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 S +G A LPD P V +ER++R + + ++ + R + + R + V+I+ + + A Sbjct: 341 SRRDGTPAARLPDDTPRSVIQERFDRLVSIVREGALARNRLSLDRTMPVLIEGISKRNA- 399 Query: 397 GRSMADAPEIDGAVY--LNGETNVKP--GDILRVKVEHADEYDLWGS 439 MA + V+ L T+++ G I+ +E A + L GS Sbjct: 400 -SMMAGKSPYNQTVHLPLPAGTSLQQWEGTIVTAHIEEARTWYLRGS 445 >UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Prevotella RepID=D1W9B3_9BACT Length = 497 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 222/465 (47%), Gaps = 44/465 (9%) Query: 5 TPQPK----IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA- 59 P+PK + + GC N+ DSE + + ++ GY++ ++AD + +NTC ++A Sbjct: 43 NPKPKTMKKLYIETYGCQMNVADSEVVASVMQMAGYEICDKEEEADAIFLNTCSVRENAE 102 Query: 60 --VQESLEAIGEALNENGKVIVTGCLGA-----KEDQIREVHPKVLEITGPHSYEQVLEH 112 + L+++ A + G+ ++ G LG K+D + H + + GP SY + + Sbjct: 103 NKIYNRLDSL-HAERKKGRNLILGVLGCMAERVKDDLLDNHHTDL--VCGPDSYLNLPDM 159 Query: 113 VHHY--------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRG 164 + + K + +VP++ L + ++ I GCN+ C +CI+P RG Sbjct: 160 IAQAETGNKAIDIELSKTETYKDVVPQR--LLIGKIGGFVSIMRGCNNFCHYCIVPYTRG 217 Query: 165 DLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDV-KHRTGFHNGEPVKTSMVSLC 223 SR + +L E + L D KEI ++ Q+ ++Y + +H + GE + + Sbjct: 218 RERSRDVESILREVRDLRDKHCKEITLLGQNVNSYCFTIPEHLSA--TGETIPAETIDFP 275 Query: 224 EQLSKL-----GIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKR 277 + L ++ G+ R +P DD + ++AE + ++ +P+Q S +ILKLM R Sbjct: 276 KLLRRVAHEVPGVRIRFTSSHPKDMSDDTLRVIAEEPNVCKHIHLPVQSGSNKILKLMNR 335 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 +V+ + RI R I P+ + + VG+ GETEED Q L ++ D FKYS Sbjct: 336 KYTVEWYMDRINAIRRIIPDCGISTDMFVGYHGETEEDHQQSLVLMRTVGYDSAFMFKYS 395 Query: 338 PVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 G A+ LPD VPEE K R N + LQ ++SA ++ G+ V++ EG Sbjct: 396 ERPGTYASKHLPDDVPEEEKIRRLNEMIHLQTELSAVSNKKDEGKTFDVLV-----EGFS 450 Query: 397 GRS---MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 RS + E + V + + N G+ +RV++ + L G Sbjct: 451 KRSREQLCGRTEQNKMVVFD-KVNHHIGETVRVRIVGSTSATLLG 494 >UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostridia RepID=B0KA65_THEP3 Length = 467 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/398 (27%), Positives = 196/398 (49%), Gaps = 29/398 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + F +LGC N ++E + + GY+VV + AD+ ++NTC + + +S + Sbjct: 32 KKTVAFYTLGCKVNQYETEVMAELFKKAGYEVVDFNEKADVYVINTCTVTNRSDMKSRQE 91 Query: 67 IGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I +A +N V+ GC + P+V G + ++++E V + K N Sbjct: 92 IRKARKKNPDALVVAVGCYVQVSPEEAFSLPEVDIAIGTKNKDKIVELVEEFTQK---NQ 148 Query: 125 FLSLV---------PEQGVK-LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 LS+V E GV T R AY+KI +GCN CT+CIIP RG + SR +V Sbjct: 149 KLSVVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYCIIPYARGPVRSRDPKKV 208 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-W 232 L E KR D+G KEI++ ++YG D+K+ ++ + + + ++ GI Sbjct: 209 LDEVKRFADSGYKEIVLTGIHIASYGKDLKN-----------IGLLDIIKMIHEIDGIKR 257 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 RL + P ++ + +A K+ + + LQ LK M R + + I + Sbjct: 258 IRLSSIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRL 317 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 RE ++ + + +VGFPGETEE+F F++E ++ FKYS +G A P+QV Sbjct: 318 REYIKDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQV 377 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 +KE+R + ++L + + ++ +G+ + V+ ++ Sbjct: 378 ANHIKEDRSKKLIELSNRCEYKFMESFIGKTLEVLFEQ 415 >UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E278_DICTD Length = 441 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 114/399 (28%), Positives = 199/399 (49%), Gaps = 26/399 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK ++ GC N DSE++ L + GY ++AD++++NTC + A ++ + Sbjct: 2 PKYHIITYGCQMNKSDSEKVAGILESLGYIPSEKMEEADLILLNTCSVRERAEEKVFGKL 61 Query: 68 GEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQ---VLEHVHHYVP 118 GE K + + GC+ + ++++ E P V + G + + + VLE ++ Sbjct: 62 GELRKLKKKNQKLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKVLESLNDNNK 121 Query: 119 K---PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K + NP V + ++ + A++ I GCN+ CT+CI+P +RG SR E++ Sbjct: 122 KIVLAEDNPKPEEVDFRIIRRENKFQAWIPIIYGCNNFCTYCIVPYLRGKEKSRDPQEII 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E + L + GV E+ ++ Q+ +YG D+ + + L ++ K+ R+ Sbjct: 182 KEIEHLANQGVVEVTLLGQNVDSYGKDLGN-----------VDLADLLVEIHKIPGIKRI 230 Query: 236 HYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 ++ +P D +I ++A KI P+ +PLQ S RIL+ M R + + A I++ R Sbjct: 231 RFLTSHPRDVSDKLINVVATHPKICPHWHLPLQAGSDRILRRMGRGYTYNEYKALIEKIR 290 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P + + IVGFPGE EEDF L+E + D V YS G A + D VP Sbjct: 291 AKIPRASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAASYDDPVP 350 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD 391 E K++ ++ LQ++I ER +G+E LV+ + V+ Sbjct: 351 YETKKKWFDELENLQRKIIYERNLSMIGKEELVLAEGVN 389 >UniRef50_C4V544 2-methylthioadenine synthetase n=3 Tax=Selenomonas RepID=C4V544_9FIRM Length = 519 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 113/395 (28%), Positives = 186/395 (47%), Gaps = 29/395 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + F++LGC N ++E + R GY++VP + AD+ ++NTC + ++S + I Sbjct: 92 RAAFMTLGCKVNQFETETMEGLFRARGYEIVPFEERADVYVINTCSVTHLSDRKSRQIIR 151 Query: 69 EA--LNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHY--------- 116 A +N + V GC +++R + V + G +++++V Sbjct: 152 RAARMNPTACIAVAGCYAQVSPEEVRGLE-GVRVVIGTEERARIVDYVEEALHADGVVEE 210 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + +P GV R A+LKI +GC + C+FCIIP RG + SRP+ V Sbjct: 211 ITDVMQARAFEDIPLHGVPHRTR--AFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAR 268 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E ++L AG +E+++ AYG+D+ R + +T++ + +++ +L RL Sbjct: 269 EMEKLAAAGFREVVLTGIHLGAYGIDLPQRPTL--ADACRTALRT--KEVRRL----RLG 320 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + +D++ L+ E + P+L +PLQ S +L+ M R + R Sbjct: 321 SLESVELSEDLLSLVRTEPRFAPHLHLPLQAGSDNVLRAMNRRYDTAAFAQLLADVRRAV 380 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + IVGFPGETEEDF LDF++ R+ F YS G A DQ+ V Sbjct: 381 PGAAISTDIIVGFPGETEEDFTAGLDFVRAMGFARMHVFPYSARRGTPAARRTDQIAPPV 440 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEV 390 + ER R L AE + E R L +DEV Sbjct: 441 RRERAARMQAL-----AEEMAEAYHRAALGTVDEV 470 >UniRef50_A3JF75 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JF75_9ALTE Length = 183 Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 71/102 (69%), Positives = 90/102 (88%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+GF+SLGCPK LVDSERILT+LR +GYDVVP+Y DAD+V+VNTCGFID+A QESL+AIG Sbjct: 50 KVGFISLGCPKALVDSERILTQLRLDGYDVVPTYKDADIVVVNTCGFIDAAKQESLDAIG 109 Query: 69 EALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVL 110 EA++ENGKVIVTGC+G + D+IRE HP VL ++ H+ E+V+ Sbjct: 110 EAISENGKVIVTGCMGLEADKIRETHPGVLVVSNLHACEEVV 151 >UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHG4_9BACT Length = 427 Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 106/394 (26%), Positives = 197/394 (50%), Gaps = 28/394 (7%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N+ DSE I + L G+ V +AD+++ NTC A + L I Sbjct: 7 TYGCQMNVADSELIASILTKAGHQEVTQISEADLLLFNTCSVRGHAEERVLGRIQSENHR 66 Query: 69 EALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + N N K+ V GC+ + ++I + V + G Y+ + + ++ K Sbjct: 67 KKENPNLKIGVVGCMAQRLGEEINKEKLTVDFVIGVDQYQHLPDILNEETEKTILTDLDE 126 Query: 128 LVPEQGVKLTPRHY----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 +G++ P ++ AY+ I GCN+ C++CI+P +RG SR +++ E + Sbjct: 127 TQLYKGIQ--PAYHNDYCAYITIMRGCNNFCSYCIVPYVRGRERSRSWQDIIEETISAGN 184 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 G K+I ++ Q+ ++Y NGE ++ + +L ++ RL ++ +P Sbjct: 185 QGKKDITLLGQNVNSY----------LNGEVNFPRLLIILNELDEI---YRLRFITSHPK 231 Query: 244 --VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 +++I ++A KI ++ +P+Q S ILK M R +V ++ +++ + P + + Sbjct: 232 DLSEELIEVLANSAKICEHIHLPVQSGSDNILKAMNRNYTVQHYISLVEKLHKFIPNIAI 291 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + + GFPGETE DFQ L +K D C+K+SP G A L +QVPE + R Sbjct: 292 TTDIMTGFPGETENDFQDTLSLMKTIEFDDAFCYKFSPRPGTTAETLSNQVPEAERLARL 351 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 + + LQ++IS ++ +E++GR++ V I+ ++ Sbjct: 352 QQMIDLQRKISLKKNREQIGRKVEVYIESFSKKS 385 >UniRef50_Q58277 Putative methylthiotransferase MJ0867 n=10 Tax=Methanococcales RepID=Y867_METJA Length = 427 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 124/445 (27%), Positives = 214/445 (48%), Gaps = 57/445 (12%) Query: 16 GCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNENG 75 GC N D+E I L+ G++VV + ++AD+ I+NTC + I E N Sbjct: 20 GCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRINELKNLGK 79 Query: 76 KVIVTGCLGAKEDQIREVHPKVLE--ITG-----PHSYEQVLEHVHHYVPKPKHNPFLSL 128 +V+V GCL PK L+ + G P + E + +YV K P+ Sbjct: 80 EVVVAGCL-----------PKALKNKVKGFLHIYPREAHKAGEILKNYVEKHYRMPY--- 125 Query: 129 VPEQGVKLTPRHYAYLK--------ISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + E K + YLK I EGC C++CI+ RG L+S P +++++AK Sbjct: 126 IEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCSYCIVKIARGGLISYPREKIVNKAKE 185 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC----EQLSKLGIWTRLH 236 L++ G K +L+ +QDT+ YG D+ G+ + + L E + ++G+ +H Sbjct: 186 LINKGAKCLLITAQDTACYGFDI--------GDNLANLLNELTQIKGEFIMRVGM---MH 234 Query: 237 YVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +D++I + K+ +L +PLQ ILK MKR +VD + ++R Sbjct: 235 AKNAELILDELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIK 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 L + IVGFPGETEE FQ L+ L+E + D + KYS +G +A + Q+ +++ Sbjct: 295 NLCFTTDIIVGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTEAAKMK-QIDTKIR 353 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 + R +L++++S ++ +G+ + V++ +DE G+ D ++ + GE Sbjct: 354 KRRSEILDKLRRELSYLNNKKYIGKAMKVLV--LDE----GKGYTDNFKV--VKFEGGEV 405 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 G+ +VK+ A + L G + Sbjct: 406 ----GEFRKVKITDAKTFGLKGELI 426 >UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Synergistaceae RepID=D1B5R4_THEAS Length = 433 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 130/436 (29%), Positives = 204/436 (46%), Gaps = 26/436 (5%) Query: 15 LGCPKNLVDSERILTELRTEGYDVV-PSYDDADMVIVNTCGFIDSAVQESLEAIGE--AL 71 GC N+ D++++ L G+ P D ++ + TC D A Q+ L IG Sbjct: 9 FGCQMNVYDADKLRAALLGMGWTQGEPGGSDVEVYV--TCSIRDKAEQKVLSEIGRHSRS 66 Query: 72 NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVP 130 E V + GC+ + ++ P V + GP +V E + + + L P Sbjct: 67 KERPLVALVGCMAQRTGRELARRFPWVKVVAGPRHLGKVPEALERSMADGEVRLLLDEDP 126 Query: 131 EQGVKL--TPRH-----YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 + L TP Y+ I+ GC+H C +CI+P +RG SR ++ E ++LV Sbjct: 127 REVDDLCCTPHVEEGAVRGYVTIAHGCDHFCAYCIVPYVRGRFRSRDPEGIVEEVRQLVA 186 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 GV+EI ++ Q+ + YG D+ F P MV+ E +S++ R +P Sbjct: 187 RGVREITLLGQNVNRYGKDLPGGPQF----PGLLEMVARVEGISRV----RFATNHPVDF 238 Query: 244 VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +++ +M K+ P +++P+Q S R+LKLM R + D L+ + R+ PE+ + S Sbjct: 239 SRELVDVMVRCEKVCPSINLPVQSGSDRVLKLMGRGYTRDEYLSMVALLRDNLPEVGITS 298 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVGFPGET EDF+ L L+E R D V YS G A + + K ER NR Sbjct: 299 DLIVGFPGETPEDFEKSLSLLEEVRFDLVHTAAYSVRPGTRAERMEGHLDVSTKAERLNR 358 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 QLQ +IS E KVGR V+++ +G G P+ D V G + V G+ Sbjct: 359 VNQLQARISLEINLSKVGRVYPVLVEGPAPKGE-GMWQGRTPQ-DKVVLFKGPSKV--GE 414 Query: 423 ILRVKVEHADEYDLWG 438 + V++ A + L G Sbjct: 415 EVPVRITSALAWYLQG 430 >UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Anaerococcus RepID=C7HUB2_9FIRM Length = 452 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 122/454 (26%), Positives = 212/454 (46%), Gaps = 37/454 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE---- 62 K + GC N DSERI L GY +DAD ++ NTC ++A + Sbjct: 15 NKKYNITTFGCQMNEHDSERISYILEDLGYTKTDDRNDADFILFNTCLVRENAELKLYGQ 74 Query: 63 --SLEAIGEALNENGKVIVTGCL---GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 SL+ + E N + V+GC+ + I + H +V I G + + + + Y+ Sbjct: 75 VSSLKKLKEE-NPEKIIAVSGCMMQTSVAREVIEKKHKEVDIIFGTKNINSLPDLLFKYL 133 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHY-------AYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + V E VK +Y AY+ I GC++ C++CI+P RG SR Sbjct: 134 ETGER---VIDVSEDNVKDDYVNYNSKNNFQAYVNIMRGCDNFCSYCIVPQSRGREESRR 190 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 ++ E + LV G KEI ++ Q+ ++YG N + L E+ +K+ Sbjct: 191 PSHIIEEIENLVKNGYKEITLLGQNVNSYG----------NKSDFNVTFPELLEKCAKIE 240 Query: 231 IWTRLHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL + +P DD+I ++ E I Y +P+Q S ++LK M R + ++ L + Sbjct: 241 GLQRLRFTTSHPKDLSDDLIRVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEK 300 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 ++ +E P + + + IVG+P ETEEDFQ LD ++ D FKYSP A L Sbjct: 301 ARKLKEEIPGIAISTDIIVGYPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKL 360 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 D + +++ ++R++R + I E+ +E VG+ + V+++ E + + Sbjct: 361 -DPIDDKIVQDRFDRLLDTLYPIFNEKNKEYVGKVVEVLLES--ESKNNKNVLTGRTDTF 417 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V++ + N+ G I++VK+ + + G V Sbjct: 418 KLVHVKADKNL-IGQIVKVKITDNTSFTISGELV 450 >UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=27 Tax=Clostridiales RepID=MIAB_CLOPH Length = 456 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 114/400 (28%), Positives = 205/400 (51%), Gaps = 35/400 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 + GC N DSE++ L T GY V ++AD V+ NTC ++A IG Sbjct: 25 TFGCQMNAKDSEKLAGILETIGY-VESDSEEADFVVYNTCTVRENANTRVYGRIGFLGNL 83 Query: 69 EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVH--HYVPK---- 119 + N + ++ + GC+ + ++I++ + V + G H+ ++ E ++ H K Sbjct: 84 KKKNPHMRIALCGCMMQESHVVEKIKKSYRFVDIVFGTHNIFKLAELIYARHTTKKMVID 143 Query: 120 --PKHNPFLSLVP-EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + + +P EQ K A + I GCN+ C++CI+P +RG SR +++ Sbjct: 144 IWKETDKIVEELPSEQKYKFK----AGVNIMYGCNNFCSYCIVPYVRGRERSRNPEDIIK 199 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E K+LV GV E++++ Q+ ++YG + EPV S L + + ++ R+ Sbjct: 200 EIKQLVSKGVVEVMLLGQNVNSYGKTL--------DEPV--SFAQLLQMVEQVEGLKRIR 249 Query: 237 YVYPYPH--VDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 ++ P+P +DVI +M K I ++ +P+Q S +L M R + + L + + + Sbjct: 250 FMTPHPKDLSNDVIEVMKNSKKICNHIHLPVQSGSTELLMKMNRKYTKEDYLNLVDRIKM 309 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P ++L + IVGFPGETEEDF LD +++ D F YS G A + +Q+PE Sbjct: 310 AMPNISLTTDIIVGFPGETEEDFLDTLDVVRKVGYDSAYTFIYSKRSGTPAATMENQIPE 369 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE 393 EV ER+ R + ++ S++ ++ G+ V+++EV+E+ Sbjct: 370 EVANERFQRLLTTIRESSSKISKDDEGKIAEVLVEEVNEQ 409 >UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=190 Tax=Firmicutes RepID=MIAB_ANOFW Length = 527 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 124/458 (27%), Positives = 215/458 (46%), Gaps = 57/458 (12%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--EAL 71 + GC N D+E + GY+ +DA+++++NTC ++A + IG + L Sbjct: 90 TYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKVFGEIGHLKPL 149 Query: 72 NENGKVI---VTGCLGAKEDQIREVHPK---VLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 +N + V GC+ +E + ++ + V I G H+ H +P + Sbjct: 150 KQNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNI--------HRLPYILKEAY 201 Query: 126 LSLVPEQGVKLTPRH---------------YAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 +S E V++ + A++ I GC+ CT+CI+P RG SR Sbjct: 202 MS--KEMVVEVWSKEGDVIENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRR 259 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 +++ E + L G KEI ++ Q+ +AYG D +K + L ++L K+ Sbjct: 260 PEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDFTD---------MKYGLGDLMDELRKID 310 Query: 231 I-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 I R +P D +I ++A+G ++ ++ +P+Q S +LK+M R + ++ L + Sbjct: 311 IPRIRFTTSHPRDFDDRLIEVLAKGGNLVEHIHLPVQSGSSEVLKMMARKYTREQYLELV 370 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ +E P + L + IVGFP ET+E F+ L +E D F YSP EG A + Sbjct: 371 RKIKEAIPGVALTTDIIVGFPNETDEQFEETLSLYREVEFDSAFTFIYSPREGTPAAKMV 430 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG 408 D VP EVK+ER R L +ISA++++E G+ + V+++ G S + + G Sbjct: 431 DNVPMEVKKERLQRLNALVNEISAKKMKEYEGQVVEVLVE--------GESKNNPDVLAG 482 Query: 409 AVYLNGETN-VKP----GDILRVKVEHADEYDLWGSRV 441 N N V P G ++ V++ A + L G V Sbjct: 483 YTRKNKLVNFVGPKSAIGQLVNVRITEAKTWTLNGEMV 520 >UniRef50_A8ACE3 RNA modification enzyme, MiaB family n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ACE3_IGNH4 Length = 423 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 127/443 (28%), Positives = 216/443 (48%), Gaps = 38/443 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI + + GC L ++ER+L EL+++GY+VV ++AD I+ TC Q I Sbjct: 2 KIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRIK 61 Query: 69 EALNENGKVIVTGCLG-AKEDQIREVHPK--VLEITGPHSYEQVLEHVHHYVPKPKH-NP 124 E + K+IVTGCL A+ ++ V P+ ++ + H E L+ Y+ K + Sbjct: 62 ELCKASKKLIVTGCLASAQPGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPRD 121 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 +L V G ++ + I++GC CTFCI R LVS+ ++ A + V Sbjct: 122 WLKGVTPGGFRVV------IPIADGCLGNCTFCITKVARPRLVSQRPDSIIEYALKGVKR 175 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL---GIWTRLHYVYPY 241 G KEI + + D +AYG + + + L E+L K+ ++ R+ + P Sbjct: 176 GAKEIWLTAPDVAAYG------------KEIGLELPDLLEKLLKVLPENVYVRVGMMSPD 223 Query: 242 PH---VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 +D I +M + ++ + +PLQ AS ++L+LM R + + + + R+ + Sbjct: 224 TFREVMDRTIDVMRDPRVFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDP 283 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 T+ + +VGFPGE E+DF++ L L+E +RV Y+P +P QV E+VK Sbjct: 284 TIATDVMVGFPGEEEDDFELTLKALRELAFERVHLAAYTPRPLTLGARMP-QVREDVKSR 342 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYLNGET 416 R R M + + + E + VG + +DE D++ + R P V L E+ Sbjct: 343 RVKRAMNVIEAVGVEVHKRYVGGKFKAFVDEYDQKHGTFVARLWNYTP-----VVLREES 397 Query: 417 NVKPGDILRVKVEHADEYDLWGS 439 ++ G+ + VK+E A YDL G+ Sbjct: 398 SL--GEEIVVKIEGATFYDLRGT 418 >UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=10 Tax=Chlorobiaceae RepID=MIAB_CHLCH Length = 449 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 118/447 (26%), Positives = 206/447 (46%), Gaps = 40/447 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI----GE 69 + GC N DS + L+ EGY + DA +V++NTC + A + + G Sbjct: 13 TFGCQMNQADSGIMTAILQNEGYVAASNEADAGIVLLNTCAVREHATERVGHLLQHLHGR 72 Query: 70 ALNENGKVIV--TGCLGAKEDQIR-EVHPKVLEITGPHSYEQV---LEHVHHYVPKPKHN 123 G+++V TGC+ E ++ + +P V + GP +Y + ++ V Sbjct: 73 KKRSKGRLLVGVTGCIPQYEREVLFKNYPVVDFLAGPDTYRSLPLLIKQVQQAGKGATEA 132 Query: 124 P--FLSLVPEQGVK--LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F S G++ + A++ + GCN+ C +C++P RG S P VL+E + Sbjct: 133 ALAFNSAETYDGIEPVRSSSMSAFVPVMRGCNNHCAYCVVPLTRGRERSHPKAAVLNEVR 192 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPV-KTSMVSLCEQLSKLGIWTRLHYV 238 +L +AG +EI ++ Q+ ++Y +P+ + + L +S TR+ + Sbjct: 193 QLAEAGYREITLLGQNVNSYY------------DPLAQCNFAELLAAVSCAAPATRIRFT 240 Query: 239 YPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P + ++ +AE I ++ +P+Q S RIL+LM+R +++ L +I R + Sbjct: 241 TSHPKDISEALVRTIAEHSNICNHIHLPVQSGSSRILRLMQRGHTIEEYLEKIALIRSLI 300 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV-EGADANALPDQVPEE 354 P +TL + I GF GETE D Q L L+E + D F YSP A L D VPE Sbjct: 301 PNVTLSTDMIAGFCGETEADHQATLRLLEEVQFDSAFMFYYSPRPRTPAAEKLTDDVPEA 360 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEIDGAVY 411 +K+ R ++ Q +ISA + VG + V+ + E +GR+ + Sbjct: 361 LKKARLQEIIECQNRISASLFSQAVGSVVEVLAEAESRRSSEQLMGRTAGN------RTV 414 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWG 438 + + GD+L V++ + L G Sbjct: 415 VFARNGYQAGDVLHVRITGSTSATLLG 441 >UniRef50_C8WHM2 MiaB-like tRNA modifying enzyme n=3 Tax=Coriobacteriaceae RepID=C8WHM2_EGGLE Length = 410 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 108/389 (27%), Positives = 181/389 (46%), Gaps = 16/389 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 V+LGC N V+S+ L G + S AD+++VNTC A +++ +A+ Sbjct: 2 NFAVVNLGCKVNRVESDDAAARLALRGVET--SEASADLIVVNTCTVTGEAEKKTRKAVR 59 Query: 69 EAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP-KPKHNPF 125 AL N++ +V+VTGC A + E + + + G Q ++ + P P + Sbjct: 60 RALRANDHARVLVTGCAAAIDAAFYEALDERVSVVGKAQLAQAIDALFDEAPFSPGEDAP 119 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 L + G R +K+ +GC++ CT+CI+ RG SRP +V+ E AG Sbjct: 120 LHI----GSGFRTR--VGVKVQDGCDNACTYCIVHVARGRATSRPADDVVRECASYARAG 173 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG---IWTRLHYVYPYP 242 +EI++ + +Y + + ++ L G R+ + P Sbjct: 174 AREIVLTGINLGSYCDGGRRDPSAIRLAALLRRLLDETADLHAPGEAPARFRVSSIEPRD 233 Query: 243 HVDDVIPLMA--EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 D +I L+A +G++ +L +PLQ S ++L+ M RP +R +A +++ P+L L Sbjct: 234 VDDALIDLLASADGRVCRHLHLPLQAGSSKVLREMARPYDAERFVALVERLYRRIPQLAL 293 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + I GFPGET+ +FQ LD + R ++ F YSP G A DQVP VKE R Sbjct: 294 STDIIAGFPGETDAEFQETLDVARACRFAKIHAFPYSPRIGTPAAERADQVPPAVKEARA 353 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDE 389 L ++ A + G L +++E Sbjct: 354 AMLRALGDELRASERARRAGTVELALVEE 382 >UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0W4_ACIC5 Length = 448 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 122/450 (27%), Positives = 207/450 (46%), Gaps = 43/450 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--AL 71 + GC N+ DSE+++ L+ +GY V AD+++ NTC D A Q+ + + L Sbjct: 19 TFGCQMNVHDSEKVIGTLQQQGYTQVEEEAAADLILYNTCSIRDKAEQKVFNRLNDYKKL 78 Query: 72 NENGKVI-VTGCLGAKE-DQIREVHPKVLEITGPHSYEQV------LEHVHHYVPKPKHN 123 + GK V GC+ +E ++I E P V ++G SY ++ LE + Sbjct: 79 HAQGKRFGVLGCVAQQEGEKIFERAPYVSLVSGSASYRKLPEMLVQLEAGASRITGLDDR 138 Query: 124 PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 + + H Y+ I EGC+ C +C++P RG SR VL+EA+R+ + Sbjct: 139 QTEETFETEFTARSNAHRGYITIIEGCDKFCAYCVVPYTRGKERSRKSSSVLAEARRMAE 198 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG-----IWTRLHYV 238 AG EI ++ Q+ ++Y H+ E K S E L+ +G + R Sbjct: 199 AGYTEIQLLGQNVNSY----------HDPEGKK----SFAELLAAVGEVPGIVRVRFTTS 244 Query: 239 YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P D++ + A + ++ +P+Q S R+L+LM+R + ++ L +I + Sbjct: 245 HPRDFTRDIVEAIDAVPALCDHVHLPIQSGSSRVLQLMQREYTREQYLEKISWIKTARRP 304 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 +++ + IVGFPGET +DF+ + E + D + FKYSP A + D +PEE K Sbjct: 305 ISMTTDMIVGFPGETPDDFEETITLAAEVQYDGIFAFKYSPRPNTPAIHMSDSIPEEEKS 364 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYLNGE 415 R + Q++I VG + V+++ + IGR+ + LN Sbjct: 365 MRLQILLDRQREIQRINYARHVGEVMDVMVEGHNHARGQVIGRTSQNKT-------LNFT 417 Query: 416 TNV----KPGDILRVKVEHADEYDLWGSRV 441 T+ PG L+V+V + L G V Sbjct: 418 TSQPILPAPGSYLKVRVTRSLPNSLVGEAV 447 >UniRef50_A8F640 MiaB-like tRNA modifying enzyme n=1 Tax=Thermotoga lettingae TMO RepID=A8F640_THELT Length = 433 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 110/385 (28%), Positives = 189/385 (49%), Gaps = 27/385 (7%) Query: 15 LGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNEN 74 LGC N +SE ++ +L G+ + P++ +AD+ ++NTC A ++S + I + N Sbjct: 9 LGCKVNQYESEYMIEQLEQHGFVMSPNFSEADLCVLNTCAVTSEAARKSRQLIRKLRRSN 68 Query: 75 --GKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLV-P 130 ++ TGC + Q + ++ + I G + ++ ++ Y + F+ + P Sbjct: 69 PDAVIVATGCYAHIDAQSLIDIGANI--IIGNNEKRNLVNYIARYFENSSN--FVDVSEP 124 Query: 131 EQGVK------LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV-SRPIGEVLSEAKRLVD 183 +Q V L+ R AY+K+ +GCN C++CI+P RG + S+P+ V+ E L++ Sbjct: 125 DQEVLEKVKSFLSDRTRAYIKLEDGCNEFCSYCIVPKTRGKQIRSKPVEVVIKEMNDLLN 184 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 G KEI++ + YG D+ G + + +L Q+ RL + Sbjct: 185 NGYKEIVLTGVNLGKYGRDI--------GTSLSMLLRTLLNQIHD-DSRIRLSSINVQDL 235 Query: 244 VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 D++I L A K+ P+L IPLQ S RIL+ M R +V+ L ++ + I + + Sbjct: 236 SDELISLFALSNKLCPHLHIPLQSGSNRILQKMNRKYTVEEALDIFEKLKSINQYFSFTT 295 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVGFPGET DF + +KE +V FKYS G A+ L + + KE R Sbjct: 296 DVIVGFPGETIGDFLQTQELIKEIGFVKVHIFKYSSRPGTVASKLGYHISNDEKERRAKE 355 Query: 363 FMQLQQQISAERLQEKVG--REILV 385 L ++IS + ++ +G R +LV Sbjct: 356 LAALCKEISEKYRKKSIGKIRHVLV 380 >UniRef50_D0WEN9 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEN9_9ACTN Length = 423 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 122/416 (29%), Positives = 194/416 (46%), Gaps = 67/416 (16%) Query: 9 KIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + V+LGC N V+S+ + + L + G + PS AD+++VNTC A +++ +A+ Sbjct: 12 RFSIVNLGCKVNRVESDEVASMLLGSGGIEADPS--SADLIVVNTCTVTGEAEKKTRKAV 69 Query: 68 GEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 AL +++ +V+VTGC A + P +YE + E V VP+ + + Sbjct: 70 RHALRASDDARVVVTGCASAID---------------PATYEAMGERVD-VVPRLSLHDY 113 Query: 126 LSLVPEQGVK----------LTPRHYAY-----------------LKISEGCNHRCTFCI 158 L+ + G + R +A +KI +GC++ CTFCI Sbjct: 114 LTGIGAHGAQGDREPASCAAKADRSFALSDAAAARVGGSFPTRVPVKIQDGCDNACTFCI 173 Query: 159 IPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDV-KHRTGFHNGEPVKT 217 + RG SR V E L AGV+EI++ G+++ ++R G Sbjct: 174 VHVARGRSRSRDAAAVEREVSALGAAGVREIVL-------SGINLGRYRCG-------DA 219 Query: 218 SMVSLCEQLSKLGIWTRLHYVYPYPH-VDD-VIPLMAE--GKILPYLDIPLQHASPRILK 273 + +L E+L TRL P VDD +I +MA G++ +L +PLQ S RIL+ Sbjct: 220 GLATLAERLLSCAPETRLRISSIEPQSVDDALIEVMATSGGRVCRHLHLPLQSGSTRILR 279 Query: 274 LMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGC 333 M RP S R + + R P + L + IVGFPGET+ DF D ++ ++ Sbjct: 280 QMARPYSAQRFAGLVDRLRARIPGIALSTDVIVGFPGETDADFASTCDVVRTCGFSKLHV 339 Query: 334 FKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 F+YSP G A A DQVP VK ER + L ++ A+ + G L +++ Sbjct: 340 FRYSPRRGTPAAARGDQVPSAVKIERAHMLEALGAELRAQDRASRAGTVELALVES 395 >UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 Length = 474 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 131/460 (28%), Positives = 215/460 (46%), Gaps = 47/460 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ + GC N DS +I L T G ++ + +DAD++++NTC + A ++ + Sbjct: 4 KLHIKTWGCQMNEYDSSKIADLLGSTHGLELTDNAEDADVLLLNTCSIREKAQEKVFHQL 63 Query: 68 G--EALNENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + L E + V GC+ ++E + IRE V I GP + ++ E + + Sbjct: 64 GRWKMLKEAKPDLIIGVGGCVASQEGEHIRERASFVDIIFGPQTLHRLPEMIDS--ARSS 121 Query: 122 HNPFLSLVPEQGVKLT----PRH---YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 H P + + + K PR A++ I EGCN CT+C++P RG VSRP +V Sbjct: 122 HGPVVDVSFPEIEKFDRLPEPRADGATAFVSIMEGCNKYCTYCVVPYTRGAEVSRPCDDV 181 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E +L GV+E+ ++ Q+ +AY F G S L ++ + R Sbjct: 182 LFEIAQLAAQGVREVNLLGQNVNAY-----RGATFDGG---ICSFAELLRLVAAIDGIDR 233 Query: 235 LHYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P DD++ + + +++ +L +P+Q S RIL LMKR + A I++ Sbjct: 234 IRFTTSHPIEFSDDIVAVYEDTPELVSFLHLPVQSGSDRILNLMKRTHTALEYKAIIRKL 293 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P++ + S FIVGFPGET++DF+ + + E D F +S G A + D V Sbjct: 294 RRARPDIQISSDFIVGFPGETQQDFEQTMQLIAEVDFDMSYSFIFSARPGTPAADMLDDV 353 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--------IGRS---- 399 E EE+ R LQ++I+ + + + R +L + + EG GR+ Sbjct: 354 AE---EEKKQRLYILQERINQQAM--RYSRHMLGTVQRILVEGTSRKNVMELSGRTENNR 408 Query: 400 ---MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 A PE+ G T V P + V V DE L Sbjct: 409 VVNFAGQPEMIGRFVDVEITGVLPNSLRGVVVRSEDEMGL 448 >UniRef50_B5YKW1 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKW1_THEYD Length = 407 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/381 (26%), Positives = 195/381 (51%), Gaps = 26/381 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F++ GC N +++R+ L T+GY V + ++A + I+NTC A +S I Sbjct: 2 KVCFITYGCRVNQAEAQRLEKLLTTKGYVVTSNPEEASLWIINTCAVTHKAEVQSRHIIN 61 Query: 69 EALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSL 128 +A K VTGC +E+ + E L+ ++ N F +L Sbjct: 62 KAKKLGKKAFVTGCY--------------VELCRIENSEN-LKVFSNFEKDSIINNFENL 106 Query: 129 VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKE 188 +K++ RH A +K+ +GCN C++CI+P +R S I +++ E K G+KE Sbjct: 107 NKSDTLKIS-RHRAIIKVQDGCNQYCSYCIVPYLRRKPRSYKIEQIMKEIKDYQSIGIKE 165 Query: 189 ILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVD-DV 247 +++ + YG+D + N + + ++ ++ S G RL + H+D + Sbjct: 166 VVLSGINIGLYGID------YENKISLNKLLKAILKETS--GFRIRLSSI-EINHIDQEF 216 Query: 248 IPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVG 307 + ++++ +I +L IPLQH S RIL LM R + I++ ++ P++++ + +VG Sbjct: 217 LEIISDNRICKHLHIPLQHGSDRILGLMNRRYDAFQFSQIIEKIFKLYPDISIGTDVMVG 276 Query: 308 FPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQ 367 FP ETE+DF+ L +++ + F YS A+ + +Q+PE +K +R + +++ Sbjct: 277 FPSETEDDFKRTLQLIEKIGFSYLHVFPYSKRPFTKASEMTEQIPENIKRQRADCLIEVG 336 Query: 368 QQISAERLQEKVGREILVIID 388 ++ E +++ +G E+ VII+ Sbjct: 337 KRKKLEYIKKFIGSELEVIIE 357 >UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=MIAB_SORC5 Length = 498 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 131/466 (28%), Positives = 221/466 (47%), Gaps = 43/466 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P+ + GC N+ DSER+ LR GY S D+AD++++NTC + A Q+ + Sbjct: 2 PRYSITTFGCQMNVHDSERMHDVLRCAGYTEAGSADEADVLVLNTCSVREKAEQKLRSEV 61 Query: 68 GEALN-----ENGKVIVTGCLGAKEDQIREVHPKVLEIT-GPHSYEQV------------ 109 G + ++V GC+ +E + + +++ GP + ++ Sbjct: 62 GRLARWKRERADRVLVVAGCVAQQEGERLLKQMRAIDVVVGPDNIPELPGLLGDLAIGGL 121 Query: 110 -LEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + P+ P A++ + +GC+ RC+FCI+P RG Sbjct: 122 PIARTVFDLDAPRFLVASPPSPSSSSSPRAAPTAFVTVMKGCDERCSFCIVPHTRGPERY 181 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAY----GVDVKHRTGFHNGEPVKTSMVSLCE 224 RP E+++E LV AG +E+ ++ Q ++Y G + G +P ++ +L Sbjct: 182 RPSDEIVAEIAALVAAGTREVTLLGQTVNSYRDPLGA-LPRAPGASADDPDESEFAALLR 240 Query: 225 QLSK-LGIWTRLHYVYPYP-HVDDVIPLM-AEGKILP-YLDIPLQHASPRILKLMKRPGS 280 +++ + RL Y P+P H+ + L AE +LP ++ +P+Q S R+L+ M R + Sbjct: 241 RVAADVPGLARLRYTSPHPRHLTPSLVLAHAELPVLPRHVHMPVQSGSDRVLRRMIRRYT 300 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 +AR + E P LTL + IVGFPGETE+DF L ++E + FKYS Sbjct: 301 RAEYVARTRALVEAVPGLTLSTDIIVGFPGETEDDFAATLSLVREVGFKGLFGFKYSRRP 360 Query: 341 GADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE------- 393 A LPD VPE VK ER R + + + A L VG V+++ D+E Sbjct: 361 HTPALKLPDDVPEGVKGERLARLFEESEALLAAHLSALVGTTQEVLVEGRDKERGHGGAG 420 Query: 394 GAI--GRS-MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 GA+ GR+ + IDGA GE ++ G+++ V + A+++ L Sbjct: 421 GALWSGRTGRHEIAHIDGA----GELDLL-GEVVEVSIARANKHSL 461 >UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavobacteriales RepID=C6WZM1_FLAB3 Length = 508 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 212/461 (45%), Gaps = 37/461 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ S GC N DSE + + L +GY+ ++++AD++++NTC + A Q + Sbjct: 49 KLFLESYGCQMNFSDSEIVASILSKQGYNTTLNHEEADLILLNTCSIREKAEQTVRMRLS 108 Query: 69 EALN-----ENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQV----------LEH 112 + N N V V GC+ + + + E V + GP +Y + + Sbjct: 109 QFKNLKKERPNLTVGVLGCMAERLKTKFLEEEQLVDLVVGPDAYRDLPNLLKETDSGRDA 168 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 ++ + K + ++ V G +T A++ I+ GC++ CTFC++P RG SR Sbjct: 169 INVILSKDETYADINPVRLGGNGVT----AFVTITRGCDNMCTFCVVPFTRGRERSRDPH 224 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAY-----GVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 ++ E K L + G KEI ++ Q+ +Y G + + L E ++ Sbjct: 225 SIVEECKTLWENGYKEITLLGQNVDSYLWYGGGAKKDFKNASEMQQLTAIRFAQLLEMVA 284 Query: 228 KLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 R+ + PH DV +MA+ I Y+ +P+Q S RIL+ M R + Sbjct: 285 VAVPEMRIRFSTSNPHDMTVDVFEVMAKHDNICKYVHLPVQSGSDRILEKMNRQHTRAEY 344 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 L I + +EI PE++ I+GF GETEED Q+ L ++E D F YS G A Sbjct: 345 LNLINRAKEIVPEISFSQDMIIGFCGETEEDHQLTLSLMREVEYDYGYMFAYSERPGTPA 404 Query: 345 N-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSM 400 + + D VP +VK+ R + LQ ++S +R+Q GR V+I+ ++ GR+ Sbjct: 405 HRKMEDDVPADVKQRRLAEVIALQGELSRKRMQGYAGRMHEVLIEGTSKKNQNQWKGRNS 464 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 +A + + K GDI+ V V + L G+ V Sbjct: 465 QNA-----VCVFDKLEDQKLGDIVTVFVHGNTQGTLLGTTV 500 >UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=MIAB_UNCTG Length = 418 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 106/388 (27%), Positives = 190/388 (48%), Gaps = 32/388 (8%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG----- 68 ++GC N+ DS+ +++ G + +AD+VI+NTC A Q++ +G Sbjct: 7 TIGCQMNVCDSDMLVSIFSAYGASKANNLSEADVVILNTCSVRSQAEQKAFSYLGRVKEF 66 Query: 69 EALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + N K++V GC+ + I++ V I G + N F + Sbjct: 67 KQKNPCIKIVVIGCMAERLGPNIKKRFSSVDLIIGAKDIGNAALKIM--------NLFRT 118 Query: 128 LVPEQGV--KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 + V ++ + Y+ I GC++ C++C +P +RG VS +++E +V G Sbjct: 119 DYSAKKVNSEIKSKIVRYITIMRGCDNYCSYCAVPFVRGREVSINCETIVNECSSMVKNG 178 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH-- 243 +EI+++ Q+ ++Y + + SL ++ + + R+ ++ +P Sbjct: 179 AREIILLGQNVNSYQYE-------------DVNFASLIKKTAAIENLERIRFMTNHPKDL 225 Query: 244 VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 DD+I +MA E K+ P++ IP+Q AS +ILK M R S + L IK+ R P++++ + Sbjct: 226 SDDLIKIMATEPKVCPHIHIPMQSASDKILKAMNRKYSYEHYLGLIKKLRTAVPDVSVTT 285 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVGFPGET+EDF+ L +K R + F+YSP A + D VP E K+ R Sbjct: 286 DIIVGFPGETDEDFEDTLKAVKTIRFGGLYVFRYSPRPDTKAAEMIDDVPFEEKKRRHAV 345 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEV 390 ++ +IS E + E +G V+ +E+ Sbjct: 346 VLKESNKISIEIVSEMLGSTQQVLAEEI 373 >UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Bacteroidales RepID=MIAB_PORG3 Length = 465 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 125/462 (27%), Positives = 220/462 (47%), Gaps = 54/462 (11%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + K+ + GC N+ DSE + + ++ +GY + + D+AD ++VNTC D+A Q+ L Sbjct: 17 ERKLYIETYGCQMNVADSEVVASVMQMDGYSLTDNVDEADTILVNTCSVRDNAEQKVLNR 76 Query: 67 IG--EALNENGKV---IVTGCLGA-----KEDQIREVHPKVLEITGPHSY---------- 106 + +L + + +V G LG KE+ IRE H V + GP SY Sbjct: 77 LAYYHSLRKKRRASSRLVIGVLGCMAERVKEELIREHHVDV--VAGPDSYLDLPNLVGAA 134 Query: 107 EQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGD 165 EQ + ++ V + ++P +K+ H ++ I GCN+ C++CI+P RG Sbjct: 135 EQGEKAIN--VELSMQETYKDVMP---LKMGGVHINGFVSIMRGCNNFCSYCIVPYTRGR 189 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVK--TSMVSLC 223 SR I +L+E + L +E+ ++ Q+ ++Y + NG ++ + ++ Sbjct: 190 ERSREIESILNEVRDLKAKNFREVTLLGQNVNSYRYE-------QNGRIIRFPDLLAAVA 242 Query: 224 EQLSKLGIWTRLHYVYPYPHV--DDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGS 280 E + + R+ + P+P D+ I +MA + I ++ +P Q S ++L++MKR + Sbjct: 243 EAVPDM----RIRFTSPHPKDMDDEAIAVMARYRNICNHIHLPAQSGSDKMLRVMKRGYT 298 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 L R+ R P+ + S GF ETEEDF+ L ++E D FKYS Sbjct: 299 RRWYLDRVAAIRRAIPDCAISSDLFCGFHSETEEDFEATLSLMEEVGYDSAFMFKYSERP 358 Query: 341 GA-DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAI 396 G A L D V EEVK R +R + LQ ++S E + + + V+I+ + E Sbjct: 359 GTYAARHLVDDVLEEVKLARLDRMIALQNRLSEESNKRDISKTFEVLIEGFSKRSREQLF 418 Query: 397 GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 GR+ + V + + + G + V+++ A L+G Sbjct: 419 GRTQQN------KVVIFDKNGHRVGQYIYVRIKDASSATLFG 454 >UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUN0_DESHD Length = 439 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 127/402 (31%), Positives = 196/402 (48%), Gaps = 32/402 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + FV+LGC N +SE + R GY VV S + AD+V+VNTC ++ +S + I Sbjct: 12 VCFVTLGCKVNQTESEALGQLFRNNGYHVVSSTEKADVVVVNTCTVTNTGGAKSRQTIRR 71 Query: 70 ALNE--NGKVIVTGCLG----------AKEDQI--REVHPKVLEITGPHSYEQVLEHVHH 115 + + V+V GC A D + + K+LE+ EQ + Sbjct: 72 MVKAHPDAFVVVMGCYAQTAPGEILGIAGVDLVLGTQDRGKILELIDQVKKEQQPKSSVR 131 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + K L L+ E+ R A LKI EGCN CT+CIIP RG + SR + Sbjct: 132 TIWDAKTFEELPLIEEES-----RTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAV 186 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +EA++LV AG KEI++ T +YG D+ +V Q+ L RL Sbjct: 187 TEAEKLVAAGYKEIVLTGIHTGSYGEDLGEDWDL-------ARLVKALAQIKGLH-RLRL 238 Query: 236 HYVYPY---PHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + P P + DVI + + P+L IPLQ S IL MKRP +V I++ Sbjct: 239 SSIEPMEFTPELIDVI--INYPAVCPHLHIPLQCGSDAILTRMKRPYTVKEFKELIQRLT 296 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P + + + IVGFPGETE++FQ L+ ++ + F YS EG A P+Q+P Sbjct: 297 SLQPGIAITTDVIVGFPGETEQNFQETLETVRSCGFSGIHVFPYSKREGTPAAKYPEQIP 356 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG 394 ++KEER +++ ++ + ++ +G+ + V+I+ V EG Sbjct: 357 NKIKEERVKALLEVARESQEDYVRRFIGQRVEVLIERVSPEG 398 >UniRef50_B0TAE1 Miab-like tRNA modifying enzyme n=2 Tax=Clostridiales RepID=B0TAE1_HELMI Length = 446 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 117/391 (29%), Positives = 189/391 (48%), Gaps = 23/391 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 +P F +LGC N +++ I + GY +VP AD+ +VNTC + ++S +A Sbjct: 5 EPTAAFHTLGCKVNQGETDAIAGMFKARGYAIVPFDAPADVYVVNTCTVTHLSDRKSRQA 64 Query: 67 IGEALNEN--GKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHV--HHYVPKPK 121 I +A +N V+VTGC D+++ + V + G +++ V H + Sbjct: 65 IRKANRQNPDAVVVVTGCYAQTAADEVQAIE-GVDIVVGTDRRSAIVDLVEEHRRSGETV 123 Query: 122 HNPFLSLVPEQGVKL-----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + S E+ +L R A +KI +GC+ CT+CIIP RG + SR I V+ Sbjct: 124 NTVYDSCRIERFEELPAAPERSRARATIKIQDGCDLYCTYCIIPYARGPVRSRRIESVVE 183 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 EA RL G KEI++ AYG D N + K +V LC I R+ Sbjct: 184 EATRLTGEGFKEIVLSGIHLGAYGSDF-------NADLAKL-IVELCRIPGLRRI--RVG 233 Query: 237 YVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 V P +++ + ++ P+ IPLQ S +L+ M R L ++ +++ P Sbjct: 234 SVEPQEFTPELLEAVVHPRVCPHFHIPLQSGSDAVLERMGRRYRRQDFLDVTRKIQQMIP 293 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + + S IVGFPGE E D+ + + + L + F YSP G A PDQ+P VK Sbjct: 294 GVAITSDVIVGFPGEREADYLLSEELCRATGLAGLHVFPYSPRRGTPAATFPDQIPSAVK 353 Query: 357 EERWNRFMQLQQQISAERLQEKVG--REILV 385 +ER R +L ++++++ + VG RE+L Sbjct: 354 QERAQRLAKLARELASDYAKGFVGQIREVLA 384 >UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZF9_ABIDE Length = 449 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 191/398 (47%), Gaps = 28/398 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + F++LGC N ++E I + GY++ + AD+ IVNTC + A ++S + + Sbjct: 1 MAFLTLGCKVNAYETESIKEMFKNNGYEIKQFNEVADIYIVNTCTVTNIADRKSRQMLHR 60 Query: 70 A--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 A LN V+ GC E V + G VL V Y+ K F Sbjct: 61 AKKLNPEAVVVAVGCYVQAPQSKLEDDDLVDILVGTRGKSSVLSLVEEYIRSNKTRDFKH 120 Query: 128 LVPEQGVKLTPRHY-------------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 V + G + Y A +KI +GC+ CT+CIIP +RG + SR + + Sbjct: 121 NVIKSGEENKDWAYDSGEVNAGGGKNRANIKIQDGCDQFCTYCIIPFVRGRIRSRDMEGI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIW 232 + E RLV AG +E+++ +YG D+ +GE + M+ L +L+K+ Sbjct: 181 VEETDRLVKAGFREMVLTGIHIGSYGRDI-------DGE---SRMLELLTELNKVEGDFR 230 Query: 233 TRLHYVYPYPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 RL V P ++ + L+ K+ P+ + LQ S +LK M R + L +K Sbjct: 231 IRLGSVEPRLITEEFLEGLVKLKKVCPHFHLSLQSGSTTVLKRMNRHYGAEEYLNSVKLL 290 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 ++ + + IVGFPGET+E+F+ + F+KE +V F YS +G A + +Q+ Sbjct: 291 KKYYDRPGITTDIIVGFPGETDEEFEETVAFVKEVGFLKVHVFPYSKRDGTYAAKMNEQI 350 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 E+K+ER N +++ +++S + L+ G V+++E Sbjct: 351 APEIKKERENILIKVCEEVSEKYLESFNGDMEQVLLEE 388 >UniRef50_O29021 Putative methylthiotransferase AF_1247 n=3 Tax=Archaeoglobaceae RepID=Y1247_ARCFU Length = 424 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 118/403 (29%), Positives = 197/403 (48%), Gaps = 30/403 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 ++ + GC N DS+ + L G + S +DA++VI+N+CG ID ++ + + Sbjct: 2 RVAIETYGCTTNQADSDIMRGFL--SGEFELSSVEDAEVVIINSCGVIDFTERKIIRRML 59 Query: 69 EALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK---HNPF 125 + E KV++ GCL + V L P + + V++ V+ + K F Sbjct: 60 DLKREGKKVVLAGCLTRISKEALSVADSAL---SPDNLDMVVDAVYSALNGRKLFTERRF 116 Query: 126 LSLVPEQGVKLTPRH--YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 + +K R A + ISEGC +C+FC RG L S + ++ EA+R V Sbjct: 117 IDKAEFSHLKCRLRENAIAIVSISEGCLGKCSFCATKFARGRLRSFSMDAIVREAERAVR 176 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 AG +EI + SQDT AYG+D + + L ++S++ R+ P Sbjct: 177 AGYREIQLTSQDTGAYGMD-----------KGRAMLPELLRKISEIEGEFRVRVGMMNPQ 225 Query: 244 -----VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 +D++I + KI +L IP+Q RIL+ MKR +V+ + ++ +R ++ Sbjct: 226 HAVRMLDELINAYSSEKIYKFLHIPVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDDV 285 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFP ETEE F + +KE R D V +YS +G A L D +P +K+E Sbjct: 286 LISTDIIVGFPTETEEAFWKSYELIKETRPDIVNITRYSARKGTPAARLRD-IPGWIKKE 344 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMA 401 R + L ++I E + VG+++ V+ V +EG GR++A Sbjct: 345 RSRKLTDLMRKIGLENNKRFVGKKLRVL---VTKEGKNGRNLA 384 >UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNN8_9FIRM Length = 430 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 125/443 (28%), Positives = 205/443 (46%), Gaps = 31/443 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ +LGC N ++E + + GY+VVP AD+ ++NTC ++S + I Sbjct: 2 KVALTTLGCKVNQFETETMEGLFKQRGYEVVPFEARADVYVINTCSVTSLGDRKSRQIIR 61 Query: 69 EALNENGKVIVT--GCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-HNP 124 A EN + IV GC D+I+ + V + G ++++V + + Sbjct: 62 RAHRENPQAIVAVCGCYAQVAPDEIKAIE-GVRVVLGTKERAHIVDYVEKAMQEDGIQGT 120 Query: 125 FLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ + + P R A+LKI +GC + C++CIIP RG + SR V EA Sbjct: 121 ITDIMKAKTFEDIPLYDSPERTRAFLKIEDGCQNFCSYCIIPYARGPVKSRLPEHVHREA 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC-EQLSKLGI-WTRLH 236 ++LV G KEI++ AYG D+ P ++ C E LS G+ RL Sbjct: 181 EKLVAMGFKEIVLTGIHLGAYGRDL----------PGDITLADACREVLSVPGLKRLRLG 230 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + ++ L+ E + +L +PLQ S ++LK M R I+ E Sbjct: 231 SLESIELSPELFALIREDERFCAHLHLPLQAGSDKVLKDMNRHYDTQEFARLIEHIEEEV 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + + IVGFPGETEEDF+ L F+++ R+ F YS G A A DQV E V Sbjct: 291 PGVAISTDIIVGFPGETEEDFEQGLSFVEKMNFARMHVFPYSRRTGTPAAARKDQVDEAV 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +R L + + E + +GRE+ V+ + + G + D + + + Sbjct: 351 KKERVHRMQALADRKAEEFHRSFIGREMRVLFETAKDGITDGLT-------DNYIRVYTD 403 Query: 416 TNVKPGDILRVKVEHADEYDLWG 438 V G+I +V+++ +W Sbjct: 404 EAVDCGEIYKVQIDKLWRDGVWA 426 >UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Clostridiales RepID=D1PL31_9FIRM Length = 447 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 110/398 (27%), Positives = 187/398 (46%), Gaps = 27/398 (6%) Query: 8 PKIGFV-SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + FV S GC +N+ D E+I L+ G+ + + +DAD+++ NTC + A Q Sbjct: 9 PPLAFVRSYGCQQNVNDGEKIRGVLQDVGFGICDTLEDADLILFNTCAVREHAEQRVFGN 68 Query: 67 IG--EALNENGKVIVTGCLGAKEDQ------IREVHPKVLEITG-------PHSYEQVLE 111 IG + L E ++ G G Q +R+ +P V + G P + L Sbjct: 69 IGALKKLKEQNPRLIIGVCGCMAQQPHIVEKLRQSYPYVDLVFGVDGIDRLPAMLAERLR 128 Query: 112 HVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 Y+ P+ ++V E ++ A+L I GC++ CT+CI+P +RG SR Sbjct: 129 RGKRYLETPEQRN--AVVEEMPIRRDSGFRAWLPIMYGCDNFCTYCIVPYVRGRERSREP 186 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +L+E + L+ G KEI ++ Q+ ++YG G N + LC I Sbjct: 187 DAILAEFRDLITKGYKEITLLGQNVNSYG------KGLGNPIDFADLLNLLCAVPGDYQI 240 Query: 232 WTRLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R +P +I + A+ + ++ +P+Q S R+L+ M R +V++ L + Sbjct: 241 --RFMTSHPKDASRKLIDTIAAQPHMCKHIHLPVQSGSNRLLQQMNRHYTVEQYLDLVDY 298 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R P +T S IVGFPGETEEDF+ L+ +++ ++ F YS G A +PD Sbjct: 299 ARNKIPGVTFSSDIIVGFPGETEEDFEATLELVRKVGYMQLFTFIYSKRNGTPAAKMPDP 358 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388 K R R ++ Q +I+ + G+ + V+++ Sbjct: 359 TTHAEKAARMERLLRTQDEIAFAAIASMAGQNVRVLVE 396 >UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=40 Tax=cellular organisms RepID=MIAB_SYNS9 Length = 472 Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 131/470 (27%), Positives = 215/470 (45%), Gaps = 42/470 (8%) Query: 1 MSKVTPQPKIGF---------VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVN 51 + +TP K G + GC N DSER+ L + GY + DAD+V+ N Sbjct: 6 LKTLTPPSKQGLDQNRRSYWITTFGCQMNKADSERMAGILESMGYCEATAELDADLVLYN 65 Query: 52 TCGFIDSAVQESLEAIGEAL-----NENGKVIVTGCLGAKEDQ--IREVHPKVLEITGP- 103 TC D+A Q+ +G N N ++V GC+ +E + +R V P++ + GP Sbjct: 66 TCTIRDNAEQKVYSYLGRQAQRKRDNPNLTLVVAGCVAQQEGESLLRRV-PELDLVMGPQ 124 Query: 104 --HSYEQVLEHV---HHYVPKPKHNPFLSLVPEQGVKLTPRHYA---YLKISEGCNHRCT 155 + E +L+ V V +H+ + + R A ++ + GCN RCT Sbjct: 125 HANRLETLLQQVDSGQQVVATEEHHIL------EDITTARRDSAICGWVNVIYGCNERCT 178 Query: 156 FCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPV 215 +C++PS+RG SR + E + L G KEI ++ Q+ AYG D+ T E Sbjct: 179 YCVVPSVRGQEQSRRPEAIRLEMEGLAAQGFKEITLLGQNIDAYGRDLPGITAEGRREHT 238 Query: 216 KTSMVSLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRIL 272 T ++ + + RL + +P + +I A+ K+ + IP Q +L Sbjct: 239 LTDLLHHVHDVEGI---ERLRFATSHPRYFTERLIDACADLSKVCEHFHIPFQSGDNALL 295 Query: 273 KLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVG 332 K M R +V+R I + R+ P+ ++ + IVGFPGET+ ++ LD + E D+V Sbjct: 296 KSMARGYTVERYRRIIDRIRDRMPDASISADVIVGFPGETDAQYRRTLDLIDEIAFDQVN 355 Query: 333 CFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVI---IDE 389 YSP A +Q+PE VK ER L ++ + ER GR V+ I+ Sbjct: 356 TAAYSPRPNTPAATWDNQLPESVKVERLKEINALVERNARERNIRYQGRTEEVLAEGINP 415 Query: 390 VDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 D E +GR+ + A +G +PGD++ V+++ + L G+ Sbjct: 416 KDPEQLMGRTRTNRLTFFSATSPDGHL-YQPGDLVNVRIDAVRSFSLSGT 464 >UniRef50_C1XPU3 MiaB-like tRNA modifying enzyme n=2 Tax=Meiothermus RepID=C1XPU3_9DEIN Length = 440 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 134/453 (29%), Positives = 220/453 (48%), Gaps = 43/453 (9%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M+ ++P ++ +LGC N V+S+ ++ LR VV D AD+V++NTC +A Sbjct: 1 MAALSPV-RLAVRTLGCKVNQVESDALVGLLRALQPQVVRLEDGADLVVINTCAVTTTAE 59 Query: 61 QESLEAIGEALNENGK--VIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHV---H 114 ++ + + A N + ++VTGC DQ+ E+ + P++ + L V H Sbjct: 60 ADARKEVRRARRANPQAFIVVTGCYAELAPDQLAELGADAVV---PNARKAELPRVILEH 116 Query: 115 HYVPK-PKHNP---FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 +P P P F E+G+ L +++K+ +GCN C +CIIP +RG R Sbjct: 117 FGLPADPLTTPPNEFWG-AGERGL-LNNWVRSFVKVQDGCNAGCAYCIIPRLRGRERHRA 174 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 G+ L+EA+ L++AGV+EI++ GV R G + G P + L E+L +G Sbjct: 175 SGDALAEARGLLEAGVQEIVLT-------GV----RLGSYRGHP--QGIAGLVEELVLMG 221 Query: 231 IWTRLHYVYPYPHVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 RL + P +++ ++A ++ P+L + LQ S R+LKLM R + Sbjct: 222 AKVRLSSIEPEDTGRELLEVIARYAPRVRPHLHLSLQTGSDRLLKLMGRRYDTTYYRELV 281 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + + P L + I G P ETE + Q L L+E R RV F Y+P A +LP Sbjct: 282 QMAYALIPGFALTTDVIAGLPTETEAEHQETLALLRELRPSRVHAFTYTPRPKTRAASLP 341 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI-- 406 QVP E ++ R + L Q+++A R+ K+G + V+++ E +G + D E+ Sbjct: 342 -QVPIEERKRRTKEIIALAQELAAGRIAPKLGSRVEVLLESRREGQWVGHT-PDYYEVLA 399 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 DGA + G + VKV Y L G+ Sbjct: 400 DGA--------GRQGQTVWVKVREIRGYTLLGA 424 >UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Proteobacteria RepID=MIAB_NITOC Length = 447 Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 110/362 (30%), Positives = 186/362 (51%), Gaps = 27/362 (7%) Query: 16 GCPKNLVDSERILTELR-TEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--ALN 72 GC N DS R+ LR + G ++ + A+++++NTC + A ++ +G L Sbjct: 11 GCQMNEYDSSRMADVLRESHGLELTSDPEQAEVLLLNTCSVREKAQEKVFSQLGRWRQLK 70 Query: 73 ENGKVIVTG---CLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSL 128 ++ +V G C+ ++E + IR P V + GP + ++ + K P + L Sbjct: 71 QSRPELVIGVGGCVASQEGETIRVRAPYVDLVFGPQTIHRLPAMLTQ--AKASSQPVVDL 128 Query: 129 -VPE--QGVKL-TPRH---YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 PE + KL PR A++ + EGC+ C+FC++P RG+ +SRP +V++E L Sbjct: 129 SFPEIEKFDKLPEPRAEGPTAFVSVMEGCSKYCSFCVVPYTRGEEISRPFDDVIAEIVGL 188 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 + GV+EI ++ Q+ +AY + GE + L ++ + R+ + + Sbjct: 189 AEQGVREITLLGQNVNAYRGSI--------GEGDTADLALLIHYVASIEGIERIRFTTSH 240 Query: 242 P--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D +I AE ++ +L +P+Q S R+L LMKR +V A++++ R++ P++ Sbjct: 241 PVEFSDSLIQAFAEVPALVSHLHLPVQSGSDRMLSLMKRGHTVLEYKAKLRKLRQVRPDI 300 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 ++ S FIVG PGETE DFQ L + E D F YSP G A +LPD P +K+E Sbjct: 301 SISSDFIVGLPGETEADFQATLALVDEVGFDHSFSFIYSPRPGTPAASLPDCTPIALKKE 360 Query: 359 RW 360 R Sbjct: 361 RL 362 >UniRef50_C7RAG6 MiaB-like tRNA modifying enzyme n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAG6_KANKD Length = 447 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 107/437 (24%), Positives = 201/437 (45%), Gaps = 32/437 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 ++ +LGC N + + + G + D AD++++NTC A ++S + + Sbjct: 2 QVHLSALGCRLNEAELQNWANSFQRLGLSLTSEVDAADLIVLNTCAVTAEAARKSRQTVR 61 Query: 69 E--ALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 N + +VTGC + E +++ ++ L + + ++E + P F Sbjct: 62 RFHRANPQARKVVTGCYASLEPEEVAQIMGVDLVVVN-EDKDALVEQAKQLLDIPAMPEF 120 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 + E + R A++KI +GC +RCT+CI+ RG+ SR I +++ E +L G Sbjct: 121 ATEPGESALFARNRERAFIKIQDGCRYRCTYCIVTVARGEERSRTIQDLVDEVNQLHAEG 180 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY--VYPYPH 243 V+EI++ YG D+ +S+ L E + + R+ + V P+ Sbjct: 181 VQEIVLAGVHVGGYGSDID------------SSLYELVETILRDTDMPRIRFASVEPWDL 228 Query: 244 VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRST 303 ++ L A +++P++ +P+Q + +L+ M R + Q + + + Sbjct: 229 GENFFELFANPRLMPHMHLPIQSGADTVLRRMSRRCKTSSFSELVNQAKTQVAGFNVTTD 288 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRF 363 IVGFPGET+E+F++ + +++E + F YS EG A LP ++ +E+K+ER +R Sbjct: 289 VIVGFPGETDEEFELTMQYIEEVGFGHIHIFTYSDREGTKAARLPGKITKEIKKERSHRL 348 Query: 364 MQLQQQISAERLQEKVGREILVI---IDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP 420 +L ++ L+ +VG + V+ ++ EEG R P Y T + P Sbjct: 349 HELAARLKVAELERQVGLIVPVLWESSNQYTEEGN-QRYFGYTPN-----YHKIATEIPP 402 Query: 421 G-----DILRVKVEHAD 432 G IL K+E D Sbjct: 403 GLSPERTILNTKIESVD 419 >UniRef50_A8Z5Z4 Putative MiaB-like protein n=2 Tax=Candidatus Sulcia muelleri RepID=A8Z5Z4_SULMW Length = 429 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/403 (27%), Positives = 189/403 (46%), Gaps = 33/403 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F +LGC N +++ I+ + +GY+ V AD+ I+NTC +A +E + + Sbjct: 4 KVAFYTLGCKLNFAETDTIINKFLKKGYEYVKFISYADLYIINTCSVTKNAEKELKKLVR 63 Query: 69 EALNEN--GKVIVTGCLGAKEDQIREVHPKVLE-------ITGPHSYEQVLEHVHHYVPK 119 A+N N ++ GC +V+PK + I G ++ H+ K Sbjct: 64 IAINNNVNAFIVAIGCYS-------QVNPKEISLINGIDLIIGSKEKFNIINHLKKIYKK 116 Query: 120 PKHNPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 FLSL + R +YLKI +GC+++C++C IP RG +S I ++ Sbjct: 117 K----FLSLKDKNIYIPSYSRLNRTRSYLKIQDGCDYKCSYCTIPKARGFSISDNIKNII 172 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTR 234 AK ++ G+KEI++ + YG KH E ++ SL E K I R Sbjct: 173 FYAKNIIKQGIKEIVLTGVNIGDYG---KHNLL----ELIQAMESSLNEDDIKNFIKRIR 225 Query: 235 LHYVYPYPHVDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + + P DD+I + + KI + IPLQ S IL MKR S + L RIK+ Sbjct: 226 ISSIEPNLLSDDIINFIYKSKIFVNHFHIPLQSGSDEILNKMKRRYSKNLYLERIKKILN 285 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 I P + S IVGFPGE E++F L E + + F YS A + + + + Sbjct: 286 IMPFACIGSDVIVGFPGEKEKNFIETYSLLSEINISYLHVFSYSERINTKAFIMNNSITK 345 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 +++ +R F++L ++ + +++ ++ V+ + ++ G I Sbjct: 346 KIRYKRNKIFIRLSKEKKKKFYIKQINKKSNVLFENKNKSGYI 388 >UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESOH Length = 466 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 121/456 (26%), Positives = 207/456 (45%), Gaps = 45/456 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE-ALN 72 ++GC N+ DS ++ L G+ V + + AD+V VNTC A Q++ +G A Sbjct: 8 TIGCQMNVYDSSQLSAILTAMGHRSVNAPEQADLVFVNTCTIRAKAKQKATSFVGRLAAM 67 Query: 73 ENGK----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVH---HYVPKPKHNP 124 + + V V GCL +E Q+ + P V + G H+ ++ H+ H + Sbjct: 68 KRARPDMIVGVGGCLAQEEGRQLLDAFPCVDIVFGTHALGRLPGHIQAVAHQGDRIVDVE 127 Query: 125 FLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + + E L + ++ I GC++ CT+C++P +RG SR +L E + Sbjct: 128 MTAAIDESVHALQGPDSSGVTGFITIMRGCDNFCTYCVVPYVRGRETSRAPEHILDEIRA 187 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV-Y 239 V G++EI ++ Q+ ++YG K + S + L+++ LH + + Sbjct: 188 RVAGGLREITLLGQNVNSYGQ--------------KEGLCSFADLLARVNEIDGLHRIRF 233 Query: 240 PYPHVDDVIPLMAEG-----KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 H D+ P +A K+ ++ +P Q S +LK M R + L ++ RE Sbjct: 234 TTSHPKDLSPELAAAFTSLDKLCSHVHLPAQSGSDAVLKRMNRRYTRQAYLEKLHWLREA 293 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + L + IVGFPGETE+DF LD +++ R D + F YS A A A +V E Sbjct: 294 QPGMALSTDIIVGFPGETEQDFLQTLDLIEKVRYDSIFAFMYSDRPLAPARAFDGKVDEA 353 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K++R ++LQ +I+AE+ + GR V+++ + AD + G N Sbjct: 354 EKQQRIYALLELQNRITAEKNRALEGRVEQVLVEGKSKSSGRNDITADTVQWTGRTTCNR 413 Query: 415 ETN------------VKPGDILRVKVEHADEYDLWG 438 N V PG ++RV++ + L G Sbjct: 414 VANFTVPRELASGNAVGPGAMVRVEIMSGLAHSLSG 449 >UniRef50_Q7UJ47 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UJ47_RHOBA Length = 428 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 108/392 (27%), Positives = 184/392 (46%), Gaps = 16/392 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ +LGC N ++E + L+T GY+ + AD+ IVNTC ++ +S + + Sbjct: 4 KLRTRTLGCKVNQYETELVRQGLQTIGYEDASDGESADLCIVNTCTVTETGDAKSRQVVR 63 Query: 69 EALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 EN +++V GC + + P V+E+ L + Sbjct: 64 RLNRENPDARIVVMGCYATRAPEEVSALPGVVEVLTDKRELGDLMGRFGVID-------- 115 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 VP R AY+K+ +GC RC++CIIP +R L SRP E++ E RLVDAG Sbjct: 116 --VPTGLSGFAGRKRAYVKVQDGCLLRCSYCIIPMVRPKLHSRPSQEIVDEVTRLVDAGH 173 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 +E+++ YGVD + + LC+ + I R+ + + Sbjct: 174 REVILTGIHLGHYGVDWNRNKPREEWVRLAHLVKDLCQIPGQFRI--RMSSIEATEVTRE 231 Query: 247 VIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTF 304 +I +MAE K++P+L + LQ S +L+ M+R L R + RE + + Sbjct: 232 LIGVMAEFPEKVVPHLHLCLQSGSDSVLRRMRRRWGTKMFLDRCRLLRESLDRPAITTDI 291 Query: 305 IVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFM 364 I GFPGETEE+F+ L +EA ++ F YS G A DQ+ + + ER +R Sbjct: 292 IAGFPGETEEEFEQTLRTCREAGFSKIHAFPYSARRGTPAAERDDQLDKGLISERVDRLG 351 Query: 365 QLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 +++ ++ + + VG + ++++EV +G + Sbjct: 352 EVEAELRQQYYKTLVGSNLELLVEEVTPDGRL 383 >UniRef50_D1N7Z2 MiaB-like tRNA modifying enzyme n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z2_9BACT Length = 432 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 122/404 (30%), Positives = 203/404 (50%), Gaps = 30/404 (7%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--AL 71 +LGC N DS ++ L GY VV S D D+V+VN+C A ++S +A+ + A Sbjct: 9 TLGCRLNSADSALLVDRLEKAGYSVVQSVDSVDLVVVNSCTVTAEAARKSRQAVRKFRAS 68 Query: 72 NENGKVIVTGCLGA--KEDQIREVHPKVLEITGPHS---YEQVLEHV---HHYVPKPK-- 121 ++VTGC ++ +++ V+ ++ P E +L+++ H K Sbjct: 69 YPGALIVVTGCSAELDRDAYLKDGAASVV-LSNPEKRGISELILDYLAGRHELGGKAASL 127 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + P + E + R A+LKI EGCN+ C++CI+P RG SR EVL++ ++ Sbjct: 128 NEPVQAFHEEAISRFPFRSRAFLKIQEGCNNFCSYCIVPYARGPERSRSFDEVLADCRQA 187 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 V AG E+++ +T AY F G + + +C + RL P+ Sbjct: 188 VAAGYPELVLTGVNTCAY---------FDAGRDLGALVREVCRIDGNFRV--RLSSTEPH 236 Query: 242 PHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVD--RQLARIKQWREICPEL 298 PH ++ +MA E K+ +L + LQ+ RILK M R + + ARI RE P + Sbjct: 237 PHNIGLLEVMASEPKVCRFLHLALQNGCNRILKAMNRHYRREDYAEFARIA--REKIPGI 294 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 L S I+GFPGETEEDF L F+++ + F YSP G A +LP ++P EV + Sbjct: 295 HLGSDLILGFPGETEEDFADGLAFVEQMAFANLHIFTYSPRSGTPAASLPGRIPPEVAKL 354 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD 402 R+ + ++ + + ++ ++G+ + VI + V +G + R +D Sbjct: 355 RYRKLKEVAEASRRKFVESQLGQVLPVIFETVGRDG-LARGWSD 397 >UniRef50_Q9ZDB6 Putative methylthiotransferase RP416 n=42 Tax=cellular organisms RepID=Y416_RICPR Length = 421 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 115/384 (29%), Positives = 185/384 (48%), Gaps = 27/384 (7%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALN 72 V+ GC N+ +SE I L G D ++ I NTC SA +++ +AI +A Sbjct: 15 VTFGCRLNIYESEIIRKNLELSGLD--------NVAIFNTCAVTKSAEKQARQAIRKAKK 66 Query: 73 ENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKHNPFLSLV 129 N K+IVTGC ++ +V ++ G + E++L H + K N +S V Sbjct: 67 NNPDLKIIVTGCSAQANPKMYGNMSEVDKVIG--NEEKLLSHYYQITDQKISVNDIMS-V 123 Query: 130 PEQGVKLTP----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 E L + A++++ GC+H CTFCIIP +RG S PIG ++++ K LV G Sbjct: 124 KETACHLVSSFDGKSRAFIQVQNGCDHNCTFCIIPYVRGKSRSIPIGTIVAQVKHLVLKG 183 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVD 245 KE+++ D +AYG D+ G P M+ +L RL + D Sbjct: 184 FKEVVITGVDVTAYGSDLP-------GSPTFAQMIKRVLKLVPELKRMRLSSIDIAEIDD 236 Query: 246 DVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTF 304 ++ L+A +I+P+ I +Q ILK MKR + + ++ R I PE++ + Sbjct: 237 ELFELIAYSERIMPHFHISVQSGDDMILKRMKRRHNRASVIEFCQKLRAIRPEVSFGADI 296 Query: 305 IVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFM 364 I GFP ET E F+ + EA L + F YS EG A +P QVP+ +++ER Sbjct: 297 IAGFPTETNEMFENTRKLILEAELQYLHVFPYSEREGTPAARMP-QVPQNIRKERAKILR 355 Query: 365 QLQQQISAERLQEKVGREILVIID 388 Q E + +G+++ ++I+ Sbjct: 356 QDGFNQLNEFFKRHIGQKVELLIE 379 >UniRef50_C1DVQ2 Putative uncharacterized protein n=3 Tax=Hydrogenothermaceae RepID=C1DVQ2_SULAA Length = 445 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 111/402 (27%), Positives = 192/402 (47%), Gaps = 24/402 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ F +LGC N ++ + + +GYD+ AD+ IVNTC + A + S + + Sbjct: 9 KVAFATLGCRMNQFETSALEDQFSLKGYDITDFESVADIYIVNTCTVTNDADRTSRKTLR 68 Query: 69 EA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 +A N N V+ TGC Q P++ + G VLE V +Y+ + N Sbjct: 69 QAKRRNPNAIVVATGCYAQVSPQELAKIPEIDLVIGNSHKTAVLEIVENYINEKFENKVF 128 Query: 127 --SLVPEQGVKLTPRHYAY------LKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ E K Y LK+ EGCN C+FCIIP RG + S I +++++ Sbjct: 129 IDNIFRENDFKTFFISTFYEGSRPILKVQEGCNSFCSFCIIPFARGKVRSAKIQDIVNQV 188 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GIWTRLHY 237 K LVD G KEI++ S +G D H+ G+ ++ L +QL + G++ Sbjct: 189 KFLVDKGYKEIVLTGTQLSQFGYD--HKEGY---------LLDLLKQLVNVEGLYRIRLS 237 Query: 238 VYPYPHVDDVIP--LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +DD + L + KI P+ + +Q A R+LK MKR SV + + ++++ + Sbjct: 238 SMGINELDDYLIDFLTTQEKIAPHFHLSIQSADDRVLKDMKRNYSVKQYVEKVEKILKNR 297 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P+ + + I GFP E E F+ + ++E + F YS + A D+V +V Sbjct: 298 PDTAIGTDIITGFPTEDETAFKNTVKNVEEIPFAYIHVFTYSMRDNTSAVKFGDRVSPQV 357 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIG 397 K+ER ++ ++ S + ++ +G+++ +I E+ IG Sbjct: 358 KKERTKILREIGERKSIDFRKKFLGKDMEFLIITEKEDYKIG 399 >UniRef50_D1C3B2 MiaB-like tRNA modifying enzyme n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3B2_SPHTD Length = 449 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 115/402 (28%), Positives = 187/402 (46%), Gaps = 18/402 (4%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 V +P+ +LGC N D + LR G V +A++ IVNTC A + S Sbjct: 14 VRRRPRFAICTLGCKLNQSDEADLRRSLRQAGLQEVDFGSEAEVYIVNTCTVTQLADRRS 73 Query: 64 LEAIGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + + A +N + +V GC A P+V + G V++ + + + Sbjct: 74 RQMLRRAHRQNPEALVAAIGCYPAVNPDELHAMPEVDIVVGSIEKATVVDEILGRL-DWE 132 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + F S P + V+ R +KI EGC CT+CIIP RG + EV+ + Sbjct: 133 NQAFDSDEPVEHVETRTRRM--IKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRRVQEA 190 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 +D G +E+++ Y RT + L E + + RL Sbjct: 191 IDEGYREVVLTGTHVGTYKWPEGDRT---------LRLADLLELVLEATTIERLRVTSVG 241 Query: 242 PHVDD--VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR-IKQWREICPEL 298 PH D I L+ ++ P+L + LQ S +L+ MKR + RQ R +++ RE P++ Sbjct: 242 PHEIDERFIALVNHPRMAPHLHMALQSGSETVLRRMKRWYNT-RQFRRAVRRLREEVPDI 300 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFPGET+E+F DF++E ++ F +SP + A A+PDQV VKE Sbjct: 301 AITTDVIVGFPGETDEEFAETCDFVREMGFAKLHVFPFSPRKDTPAAAMPDQVHPRVKER 360 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSM 400 R + ++ A + +GRE+ V++++V E+ GRS+ Sbjct: 361 RAAELRAIGDELHAAFVARHLGREVRVLVEQVAEQLPDGRSL 402 >UniRef50_A6UW93 MiaB-like tRNA modifying enzyme n=2 Tax=Methanococcus RepID=A6UW93_META3 Length = 449 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/459 (24%), Positives = 216/459 (47%), Gaps = 49/459 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTELRT-EGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI GC N D+ I ++ + + +V + DDAD+V++NTC + + I Sbjct: 7 KIFIEGYGCTLNTADTNIINNSIKKFKNFIIVNNLDDADIVVINTCVVRLETEHKMISRI 66 Query: 68 GEALNENGKVIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP------ 120 + N +++ GC+ A + + +++P +L + P + + +++Y Sbjct: 67 NYIKSLNKYIVIAGCMPKALKKKAEKINPDILIM--PKEAHLIGDIIYNYFKNNIGNENN 124 Query: 121 --------------KHNPFLSL-----VPEQGVKLTPRHYAY-LKISEGCNHRCTFCIIP 160 HN S + + +L P + L ISEGC +CT+CI+ Sbjct: 125 ADNKIEDSMKCGELPHNQASSSGNYNDIDNKLTQLKPNNLIMPLPISEGCTGKCTYCIVK 184 Query: 161 SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV 220 RG L S +++++AK VD GVK++L+ SQDT+ Y GF + T + Sbjct: 185 IARGRLASYNPDKIINKAKEFVDNGVKQMLITSQDTACY--------GFDKNTTLPTLLN 236 Query: 221 SLCEQLSKLGIWTRLHYVYPYPH-VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPG 279 +C+ I + + P +D++I + KI + +P+Q +L+ MKR Sbjct: 237 EICQIKGDFNIRIGMMHAKNVPMIIDELIDRYKDDKITKFFHLPIQSGDDDVLRAMKREY 296 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 +VD + +++ +L + IVGFP ETE++F ++ LK+ + D + KY+ Sbjct: 297 TVDEYMDIAMEFKRKIKDLNFNTDVIVGFPTETEDNFNNTIELLKKLKPDAIHGAKYTQR 356 Query: 340 EGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS 399 +G +A+ L QV ++++ER +L+++ S E ++ VG+ + +I +G++ Sbjct: 357 KGTEADRLK-QVDTKIRKERMKILDKLRKEFSLENHEKYVGKIMPCLI--------VGKN 407 Query: 400 MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 + N E +VK G+ ++K++ A + L+G Sbjct: 408 EGITHNCKTVKFENCE-DVKIGEFRKIKIKEALTFGLYG 445 >UniRef50_A2BLS4 Conserved archaeal protein n=2 Tax=Desulfurococcales RepID=A2BLS4_HYPBU Length = 441 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/434 (26%), Positives = 209/434 (48%), Gaps = 23/434 (5%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGF-IDSAVQ-----ESLEAI 67 + GC N+ D+ + + L + GY D+AD++I+NTC +D+ + L AI Sbjct: 10 TYGCALNMADTAIMRSVLSSRGYSFTNCVDEADVIIINTCTVRLDTEARMKRRIAELAAI 69 Query: 68 GEALNENGKVIVTGCLG-AKEDQIREVHPKVLEIT--GPHSYEQVLEHVHHYVPKPKHNP 124 E +++V GC+ A+ ++ + PK + ++ H + +E + P+ P Sbjct: 70 AE--KTGARLVVAGCMASAQPYTVKRIAPKAVLVSTYNVHLVDIAVERGLDLLTPPREKP 127 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 P + L + A + I+EGC C+FCI R + SRP+ ++ + LV Sbjct: 128 KPLFKPTPRLMLRGK-IAEVPIAEGCLGDCSFCITKIARRRVYSRPVENIVKLVRELVRL 186 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV 244 G EI + QD + YG+D+ + E V+ + + + ++G+ + P + Sbjct: 187 GAVEIRLTGQDIAVYGIDLYGKRLLP--ELVRRVIEVEGDFMVRIGMMSPDQL---EPIL 241 Query: 245 DDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTF 304 D+ + + K+ ++ +P+Q R+L++MKR +VD A +++ R P + + + Sbjct: 242 DEFLEVFRHPKVFKFVHLPVQSGDDRVLRIMKRNYTVDEYRAIVREIRNKVPGVMIATDI 301 Query: 305 IVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFM 364 IVG PGE EE F+ + ++E R +RV +Y+P + A LP QVP+ VK++R R Sbjct: 302 IVGHPGEDEEAFENTVRLIEELRFERVHLAQYTPRQRTVAAGLP-QVPDPVKKKRSKRLT 360 Query: 365 QLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDIL 424 ++ +I E + +G ++ E G + DA + + E + +PG+ Sbjct: 361 EVVMRIGLEEHRRYIGSRACALVVSRGERGGL-----DAKLYNYMPVILPEGSARPGEWR 415 Query: 425 RVKVEHADEYDLWG 438 ++V A YDL G Sbjct: 416 CIEVVDATWYDLRG 429 >UniRef50_B2A5M5 RNA modification enzyme, MiaB family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5M5_NATTJ Length = 451 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 110/383 (28%), Positives = 195/383 (50%), Gaps = 11/383 (2%) Query: 13 VSLGCPKNLVDSERILTELRTEGYDVVPSYDD-ADMVIVNTCGFIDSAVQESLEAIGEAL 71 ++LGCP N +S+ + L GY + DD AD+ I+N+C +A ++S + +A Sbjct: 13 ITLGCPLNQSESDLMRARLHQAGYSETGTGDDTADIYIINSCTVTQNAARKSRKEARKAK 72 Query: 72 --NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSL 128 N + V + GC G E ++I+E P++ I G + E+ +E + + N F + Sbjct: 73 KGNPDAWVCLVGCYGEMEYEEIKEKIPEIDLIIGTRNREKAIEKL--VGQELDLNQFHNF 130 Query: 129 VPEQGVKLTP-RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 P+ ++ P + +KI EGC+ C++CI+ RG SR ++ + K ++ G + Sbjct: 131 -PQDNNEIRPDKIRPAIKIQEGCDQSCSYCIVTLARGRPKSREFRQIKQQVKSYLEEGYQ 189 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSM-VSLCEQLSKLGIWTRLHYVYPYPHVDD 246 EI++ + YG DVK ++ H+ + + M VS L R+ + P ++ Sbjct: 190 EIILAGTNMGLYGKDVKGQSK-HSYKFIDLPMLVSELATLPYDDYRIRISSLEPLEMTEE 248 Query: 247 VIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 ++ M E KI YL +PLQ S RILKLM R + D +++ + + P + + + I Sbjct: 249 LLYAMKEHDKICNYLYLPLQSGSDRILKLMNRKYTTDDFARIVEKAKTLLPGVGIMTDLI 308 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VGFPGE EED + ++F++E +L ++ F YSP A + QV ++K R + Sbjct: 309 VGFPGEKEEDHKATMEFVEELKLSKLHVFPYSPRPKTLAASFNVQVRPDIKRARTEEMKE 368 Query: 366 LQQQISAERLQEKVGREILVIID 388 L Q+++ QE + + V+ + Sbjct: 369 LGQKLARRFYQENLNTRLRVLYE 391 >UniRef50_C0R0P9 MiaB, 2-methylthioadenine synthetase n=2 Tax=Brachyspira RepID=C0R0P9_BRAHW Length = 411 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/420 (24%), Positives = 199/420 (47%), Gaps = 24/420 (5%) Query: 34 EGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNEN-------GKVIVTGCLG-- 84 EG+ ++++AD +I+NTC + + +E + + + N N K+I+ GC+ Sbjct: 3 EGFIQTENHENADNIIINTCS-VRAHAEERVFSRVKLFNANRKKNKKDTKIIIMGCMAQT 61 Query: 85 AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYL 144 +KE K+ ++ + L+ +V K N + + V H A++ Sbjct: 62 SKEHLENLGVDKIFDVYNEVNIIDYLKDEEVFVRKFNDNYIFN---KSYVDEDKPHKAFI 118 Query: 145 KISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVK 204 IS GCN+ CT+CI+P RG +VSR E++ E KRL+D G KEI ++ Q+ ++YG+D+ Sbjct: 119 PISHGCNNWCTYCIVPHTRGKMVSRKSDEIIEELKRLIDDGAKEITLLGQNVNSYGLDID 178 Query: 205 HRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIP 263 + F + + + + +K +W R +P D+ + + ++ +P Sbjct: 179 NEINF---TELLYKLDKIIYEKAKDKVWIRFLTSHPKDFDKDLADAIWNLNSLCKHIHLP 235 Query: 264 LQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFL 323 Q S RIL LM R + D + ++ R + + + IVG+ ETE+++Q L+ L Sbjct: 236 FQSGSDRILNLMNRKYTKDEYVKKVSYLRNYADDFPISTDIIVGYADETEDEYQETLNLL 295 Query: 324 KEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREI 383 + + +KYS EG+ A Q + R + Q++++ + L ++VG++ Sbjct: 296 ESIGFEEAYLYKYSEREGSIAYKKNVQYDKAAGARRLTNLVNYQRELAQKLLSKQVGKKT 355 Query: 384 LVIIDEV--DEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V++D++ D + RS + + + + + GDI +V + L G+ + Sbjct: 356 SVMVDDIAKDNMHYLCRSKENR-----IILVKKDKELNMGDIFNAEVTEIKSHTLIGNFI 410 >UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=Parachlamydiaceae RepID=Q6MAB2_PARUW Length = 434 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 116/391 (29%), Positives = 190/391 (48%), Gaps = 25/391 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K ++LGC N +S+ +L GY + AD+ IVNTC +SA S AI Sbjct: 7 KFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSSSRHAIR 66 Query: 69 EALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 + EN +++V GC ++ ++ + V + EQ+L + PK N Sbjct: 67 QLARENQGTQLLVAGCFAERQPEVIQKIDGVTHVIPNREKEQLLARLF-----PKEN--- 118 Query: 127 SLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 +PE + H A++K+ +GCN CT+CIIP +RG SR + EVL EAK L+ G Sbjct: 119 --LPEFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSRSVEEVLEEAKALISNG 176 Query: 186 VKEILVISQDTSAYGVDVKHRTG-FHNGE-PVKTS-MVSLCEQLSKLGIWTRLHYVYPYP 242 KEI++ G+++ G GE PV+ S +V + +QL L RL + P Sbjct: 177 YKEIVLT-------GINIGDFDGKVAKGETPVRLSELVRMVDQLPGLE-RLRLSSIDPDE 228 Query: 243 HVDDVIPLMAEGKILPY-LDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++ + GK + + I LQ S ILK M R + L I + + + T Sbjct: 229 VDDELSDAILNGKHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFT 288 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + IVGFPGET+ DFQ ++ +K + +V F YS +N +P++V E+ R Sbjct: 289 TDIIVGFPGETDLDFQDTIEVMKHVKFAKVHMFPYSDRPRTRSNLMPNKVSPEMIRMRKQ 348 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDE 392 +++ +Q + + + + R + ++ + +DE Sbjct: 349 EILRVAEQTAYKLREGYLNRRMKILTESIDE 379 >UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDC7_ANAPD Length = 431 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 111/402 (27%), Positives = 196/402 (48%), Gaps = 33/402 (8%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 ++LGC N +SE + + +GY+ ++AD+ ++NTC + + ++S + I Sbjct: 5 FNIITLGCKVNQYESEAVEEIFQAKGYE--KKQNNADIYVINTCTVTNMSDRKSRQMISR 62 Query: 70 ALNENGKVI--VTGCLGAKEDQIREVHPKVLE----ITGPHSYEQVLEHVHHYVPKPKH- 122 A +N + + V GC Q++ +E + G + E+V++ + + K Sbjct: 63 ARRDNPEAVIAVMGCYS----QVKPEEVAAIEGVDVVLGSRNKEEVVDLCENVLQNKKVI 118 Query: 123 NPFLSLVPEQGVK------LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + LS + ++ AY+KI +GCN C++C+IP RG++ SR + + Sbjct: 119 DKVLSFSETKTIEELEISNQEAMTRAYMKIQDGCNMYCSYCLIPYARGNIASRDMDSIKK 178 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-GI-WTR 234 EAKRL G KEI++ ++YG D++ NG TS++ + E++SK GI R Sbjct: 179 EAKRLAQNGYKEIVLTGIHVASYGKDLR------NG----TSLIDVIEEVSKTDGIERIR 228 Query: 235 LHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + P D + M A K + + LQ S ILK M R ++ RE Sbjct: 229 LSSMEPRHITRDFLERMKATEKACDHFHLSLQSGSDEILKAMNRKYDTKIFKEKVDLIRE 288 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + P L + IVGFP ETE++ + DF+KE + + FKYS +G A ++ +V Sbjct: 289 VFPNAGLTTDIIVGFPTETEKNHEETKDFVKEIKFAKTHLFKYSKRDGTKAASMKPEVNG 348 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIID-EVDEEG 394 +K+ER +++ L+ ++G+ + V+ + + D EG Sbjct: 349 NIKKERLKELEAIEEVNRLNFLKNQIGKTLSVLFESKSDMEG 390 >UniRef50_A9HM32 MiaB-like tRNA modifying enzyme n=12 Tax=Alphaproteobacteria RepID=A9HM32_GLUDA Length = 420 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 131/445 (29%), Positives = 210/445 (47%), Gaps = 42/445 (9%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 +T +P+I ++ GC N +SE + G+ + DD ++IVNTC A +++ Sbjct: 1 MTAKPEI--LTFGCRLNTYESEVM------RGH--AAALDD--VIIVNTCAVTAEAERQA 48 Query: 64 LEAIGEALNE--NGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 +AI A + +++VTGC + P V + G + LE + P Sbjct: 49 RQAIRRAHRDRPGARIVVTGCAAQIDPDRWSALPGVTRVLG---NREKLEAAS-WTPAAM 104 Query: 122 HN--------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + VP + R A++++ +GC+HRCTFCIIP RG S P+G Sbjct: 105 QDGHAVSDIMAATETVPHLVTEFAGRTRAFVEVQQGCDHRCTFCIIPFGRGPSRSVPVGA 164 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 V+ + + LV +G +EI++ D +++G D+ R + +++L +L +L Sbjct: 165 VVEQVRALVASGYREIVLTGVDITSWGGDLPGRPALGQ---LCRRVLALVPELERL---- 217 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL V P DD+ L+A EG+ +PYL + LQ S +LK MKR V+ +AR+ Sbjct: 218 RLSSVDPVEIDDDLWRLLAQEGRFMPYLHLSLQAGSDMVLKRMKRRHLVE-DVARVLDRA 276 Query: 293 EIC-PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 C P+L + + I GFP ET+ F LDF++ RL + F YS G A +P V Sbjct: 277 RACRPDLGIGADVIAGFPTETDALFAETLDFVRAQRLPYLHVFPYSERPGTPAARMP-AV 335 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 P V++ER + Q + + +GR + V++ E G S AP Sbjct: 336 PVAVRKERAAQLRAAGQAAARDYHASLLGRTLNVLL----ETATTGHSEEFAPVRLAPDR 391 Query: 412 LNGETNVKPGDILRVKVEHADEYDL 436 L+G T + G I+ V+ DE L Sbjct: 392 LDG-TAAEAGRIVTVRATAIDENGL 415 >UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY00_ACIFD Length = 487 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 123/421 (29%), Positives = 192/421 (45%), Gaps = 52/421 (12%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE---- 69 + GC N DSERI L G DA +V+ NTC +A + + + Sbjct: 9 TFGCQMNEHDSERIAGVLEGLGLTRGDDPADASVVVFNTCTIRANADERFFGQVNQLREA 68 Query: 70 -ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEH----------VHHYV 117 N + +++V GCL E + E P V I G H ++ E V Sbjct: 69 RRRNPSMRIVVAGCLAQGEGAGLLERAPHVDVIVGTHQVGRLAELLGAADGAEAVVDVRE 128 Query: 118 PKPKH------NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 P+P P+ V E+ + A++ I GC++RC FCI+P +RG SRP Sbjct: 129 PEPGSVGLDDPTPWGEAVSEEPWR------AWVTIQVGCDNRCAFCIVPRVRGPEASRPF 182 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVD----------------VKHRTG---FHNG 212 +++E + L GV E+ ++ Q+ ++YG D V R+G G Sbjct: 183 DAIVAEVRELAARGVSEVTLLGQNVNSYGRDLVLAMRRAEDERERAQVASRSGVAFLGQG 242 Query: 213 EP-VKTSMVSLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHAS 268 P V+ L + + R+ + P+P + MAE + L PLQ S Sbjct: 243 VPRVRPLFADLVRAVGAVPGIRRVRFTSPHPKDMRTETFQAMAETPTVCESLHFPLQSGS 302 Query: 269 PRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARL 328 RIL M R S DR LA++ + R +L + + IVGFPGET+ DF+ L+ EA Sbjct: 303 DRILAAMHRGYSADRFLAKLAEARATIDDLAVSTDIIVGFPGETDADFEATLEVAAEAAF 362 Query: 329 DRVGCFKYSPVEGADANALPDQ-VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVII 387 D F YSP G +A AL D+ V +V ER++R +++ ++ +A + +VGR+ ++I Sbjct: 363 DLAYTFIYSPRPGTEAAALVDRFVDPDVVHERFDRLVRVTERSAAAAHRARVGRDEEILI 422 Query: 388 D 388 + Sbjct: 423 E 423 >UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYG6_9DELT Length = 486 Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 114/461 (24%), Positives = 205/461 (44%), Gaps = 49/461 (10%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P++ + GC N D+ +L LR +G+ V S +AD+V+VNTC + A Sbjct: 36 PRVYMETFGCQMNEADTALVLGRLRQDGWVRVTSPAEADLVLVNTCAVREKAEDRVYGRT 95 Query: 68 GEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + L+ + + +TGC+ D++ P + + GP SY + + + Sbjct: 96 TQLLDHRNRNPDLVIGITGCMAEHLRDKLETRAPHIQLVAGPDSYRNIAALARKAITGER 155 Query: 122 H--------------NPFLSLVPEQGVKLTPRH----YAYLKISEGCNHRCTFCIIPSMR 163 +P + + G + Y+ I GC+ CTFC++P R Sbjct: 156 AVDVHLDKAEVYEGLDPVIRSPGDDGSEAATSRDDGVSGYVTIQRGCDKFCTFCVVPFTR 215 Query: 164 GDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC 223 G P EVL +A+RL +AG +E+ ++ Q ++Y + S L Sbjct: 216 GRERGVPPREVLRQARRLAEAGYRELTLLGQTVNSYAWE-------------DVSFAELL 262 Query: 224 EQLSKLGIWTRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGS 280 ++ + R+ + PYP D++I ++A E K+ PY+ +P+Q + +L+ M+R + Sbjct: 263 RAVAAVEGIERIRFTSPYPVDFSDELIEVLATEPKVCPYVHMPVQAGADVVLERMRRGYT 322 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 + +++ R P + + + +VGF GETE D L ++E + D F YS E Sbjct: 323 LADYRELVRKLRAAVPHIAISTDIMVGFCGETEADHAETLALMEEVQFDFAFMFAYSDRE 382 Query: 341 GADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIG 397 A+ L D VP+E K R ++LQ++ + RL +VG+ V++ + G +G Sbjct: 383 ITYASKKLVDDVPQETKLRRLREVIELQEKHTRARLAARVGQRDRVLVVNTSKRGDKLLG 442 Query: 398 RSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 R+ P + G PG+ + V + + L+G Sbjct: 443 RT----PTFQKVLLPLG--CAAPGEFVDVTITGTTGHSLFG 477 >UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APT3_9BACE Length = 460 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 28/405 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD--ADMVIVNTCGFIDSAVQESLEA 66 K +LGC N ++E + L GY++VP +D AD+ ++NTC + A ++S + Sbjct: 2 KAALHNLGCKVNSYETEAMEQMLIAAGYEIVPFCEDEKADVYVINTCSVTNIADRKSRQM 61 Query: 67 IGEA--LNENGKVIVTGC-LGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + +A N N V+ GC + A+ D++ V + G + +++E ++ Y+ +N Sbjct: 62 LHKAKKQNPNAIVVAAGCYVQARGDEL-AADDMVDIVIGNNRKNRLVEIINDYIGNNSNN 120 Query: 124 PFLSLVP------EQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + E + H AY+K+ +GCN C++CIIP RG + SR +V + Sbjct: 121 EAVVDIAKTHEYEELNIYDVCEHTRAYIKVQDGCNQFCSYCIIPYTRGRVRSRRPEDVTA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVD--------VKHRTGFHNGEPVKTSMVSLC--EQL 226 E +RLV+ G KE ++ S+YG+D V +R G + + ++C E + Sbjct: 181 EVRRLVEKGYKEFILAGIHLSSYGIDFEAPCDEAVDYRAANMPGSRLLELIEAVCSVEGV 240 Query: 227 SKLGIWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 +L RL P + + MAE + + P+ I LQ LK M R + D Sbjct: 241 KRL----RLGSFEPRILTEAFVKRMAELEPVCPHFHISLQSGCDATLKRMNRRYTADEYE 296 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 K R+ P + + IVGFP ET+E+F + ++L+ + FKYS +G A+ Sbjct: 297 ESCKLLRKYFPNAAITTDVIVGFPQETDEEFAITKEYLERIHFYEMHVFKYSRRKGTAAD 356 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV 390 + QVPE VK R ++L++++S E + +G V+ +EV Sbjct: 357 RMDGQVPEPVKTARSAGLLELEKRMSREYRESALGSIQEVLFEEV 401 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO... 547 e-154 UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO... 535 e-150 UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO... 495 e-138 UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO... 487 e-136 UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO... 479 e-134 UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO... 476 e-133 UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO... 476 e-133 UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 475 e-132 UniRef50_A4WRD4 Ribosomal protein S12 methylthiotransferase rimO... 474 e-132 UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mit... 474 e-132 UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO... 474 e-132 UniRef50_C4Z0L1 2-alkenal reductase n=16 Tax=Bacteria RepID=C4Z0... 473 e-132 UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax... 468 e-130 UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 467 e-130 UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 466 e-130 UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransfer... 466 e-130 UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 466 e-130 UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 465 e-129 UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 463 e-129 UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO... 463 e-129 UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO... 462 e-128 UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Breviba... 461 e-128 UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotran... 461 e-128 UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 461 e-128 UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransfer... 460 e-128 UniRef50_A9F1Y8 Ribosomal protein S12 methylthiotransferase rimO... 460 e-128 UniRef50_A7NIS8 Ribosomal protein S12 methylthiotransferase rimO... 460 e-128 UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO... 458 e-127 UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxyd... 458 e-127 UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Ba... 458 e-127 UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 457 e-127 UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pir... 456 e-127 UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicute... 456 e-127 UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=... 456 e-127 UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO... 455 e-126 UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO... 455 e-126 UniRef50_A6NW35 Putative uncharacterized protein n=1 Tax=Bactero... 454 e-126 UniRef50_Q2LQ68 Ribosomal protein S12 methylthiotransferase rimO... 454 e-126 UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO... 454 e-126 UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Cht... 454 e-126 UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Sub... 453 e-126 UniRef50_A0L887 Ribosomal protein S12 methylthiotransferase rimO... 453 e-126 UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO... 452 e-126 UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO... 452 e-125 UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Rum... 452 e-125 UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 452 e-125 UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerof... 451 e-125 UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO... 451 e-125 UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO... 451 e-125 UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 451 e-125 UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dic... 451 e-125 UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostri... 450 e-125 UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rho... 449 e-125 UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransfer... 449 e-125 UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO... 449 e-125 UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO... 449 e-124 UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Vic... 448 e-124 UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 448 e-124 UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransfer... 448 e-124 UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Vei... 448 e-124 UniRef50_Q0AXI3 Ribosomal protein S12 methylthiotransferase rimO... 448 e-124 UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 448 e-124 UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Aci... 446 e-124 UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransfer... 446 e-124 UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fu... 446 e-124 UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdema... 446 e-123 UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransfer... 445 e-123 UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransfer... 445 e-123 UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 445 e-123 UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO... 444 e-123 UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 444 e-123 UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Vic... 444 e-123 UniRef50_A8UT74 Putative uncharacterized protein n=1 Tax=Hydroge... 443 e-123 UniRef50_Q7UK39 Ribosomal protein S12 methylthiotransferase rimO... 443 e-123 UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransfer... 442 e-122 UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 442 e-122 UniRef50_A9A0B5 Ribosomal protein S12 methylthiotransferase rimO... 441 e-122 UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 441 e-122 UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Seb... 441 e-122 UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO... 441 e-122 UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fu... 440 e-122 UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bac... 440 e-122 UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO... 440 e-122 UniRef50_Q6MBU9 Ribosomal protein S12 methylthiotransferase rimO... 439 e-122 UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 439 e-121 UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eub... 439 e-121 UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 439 e-121 UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillone... 439 e-121 UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Cal... 439 e-121 UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclass... 438 e-121 UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 438 e-121 UniRef50_B2KB59 Ribosomal protein S12 methylthiotransferase rimO... 437 e-121 UniRef50_B0P6Q6 Putative uncharacterized protein n=1 Tax=Anaerot... 437 e-121 UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoni... 436 e-121 UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavo... 436 e-121 UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 ... 435 e-120 UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransfer... 434 e-120 UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 434 e-120 UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bact... 434 e-120 UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO... 434 e-120 UniRef50_C0QIB5 2-methylthioadenine synthetase n=1 Tax=Desulfoba... 433 e-120 UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bactero... 433 e-120 UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sph... 433 e-120 UniRef50_C8WY42 MiaB-like tRNA modifying enzyme n=58 Tax=Bacilla... 433 e-120 UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 433 e-120 UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mi... 432 e-119 UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO... 432 e-119 UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 ... 432 e-119 UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candida... 432 e-119 UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 431 e-119 UniRef50_B1I695 MiaB-like tRNA modifying enzyme n=6 Tax=Clostrid... 431 e-119 UniRef50_B0TAE1 Miab-like tRNA modifying enzyme n=2 Tax=Clostrid... 431 e-119 UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 431 e-119 UniRef50_C7RHT5 RNA modification enzyme, MiaB family n=3 Tax=Ana... 430 e-119 UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisp... 429 e-119 UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Cor... 429 e-118 UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 428 e-118 UniRef50_D2RJ51 RNA modification enzyme, MiaB family n=1 Tax=Aci... 428 e-118 UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2... 428 e-118 UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 427 e-118 UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2... 427 e-118 UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO... 426 e-118 UniRef50_B2A1N3 RNA modification enzyme, MiaB family n=1 Tax=Nat... 426 e-118 UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostri... 426 e-117 UniRef50_C7MNG6 MiaB-like tRNA modifying enzyme YliG, TIGR01125 ... 425 e-117 UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostri... 425 e-117 UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 425 e-117 UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisp... 425 e-117 UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiot... 424 e-117 UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halother... 424 e-117 UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 424 e-117 UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO... 424 e-117 UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 424 e-117 UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 424 e-117 UniRef50_Q1JYQ2 MiaB-like tRNA modifying enzyme n=2 Tax=Desulfur... 423 e-117 UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 423 e-117 UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 423 e-117 UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIH... 423 e-117 UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP... 422 e-116 UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransfer... 422 e-116 UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae Rep... 422 e-116 UniRef50_C0WDC4 RNA modification enzyme n=1 Tax=Acidaminococcus ... 422 e-116 UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 422 e-116 UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 422 e-116 UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 421 e-116 UniRef50_C9M5C2 RNA modification enzyme, MiaB-family n=1 Tax=Jon... 421 e-116 UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax... 421 e-116 UniRef50_B5EE49 (Dimethylallyl)adenosine tRNA methylthiotransfer... 421 e-116 UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 420 e-116 UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fib... 420 e-116 UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Ato... 419 e-116 UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 419 e-115 UniRef50_D1U9N9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Des... 419 e-115 UniRef50_C0GKG0 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Det... 418 e-115 UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 418 e-115 UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobi... 418 e-115 UniRef50_A0LIM0 Ribosomal protein S12 methylthiotransferase rimO... 418 e-115 UniRef50_A1APR6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 417 e-115 UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransfer... 417 e-115 UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicu... 417 e-115 UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=... 417 e-115 UniRef50_D1H8D6 Whole genome shotgun sequence of line PN40024, s... 417 e-115 UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 417 e-115 UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 416 e-115 UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO... 416 e-115 UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genom... 416 e-115 UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Ta... 416 e-115 UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Syn... 416 e-115 UniRef50_B5W2N4 RNA modification enzyme, MiaB family n=5 Tax=Cya... 415 e-114 UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collins... 415 e-114 UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO... 414 e-114 UniRef50_D2QJ28 RNA modification enzyme, MiaB family n=1 Tax=Spi... 414 e-114 UniRef50_A4S5H4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 414 e-114 UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_Q2GCU4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmati... 414 e-114 UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=... 414 e-114 UniRef50_B3ES11 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=C... 413 e-114 UniRef50_Q8EUX4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 413 e-114 UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pir... 413 e-113 UniRef50_B9L1I3 MiaB-like tRNA modifying enzyme YliG, TIGR01125 ... 412 e-113 UniRef50_C4V544 2-methylthioadenine synthetase n=3 Tax=Selenomon... 412 e-113 UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 412 e-113 UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clo... 412 e-113 UniRef50_B6GBU3 Putative uncharacterized protein n=2 Tax=Collins... 411 e-113 UniRef50_Q2LVR5 TRNA 2-methylthioadenosine synthase-like protein... 410 e-113 UniRef50_A3EVU0 RNA modification enzyme, MiaB family n=3 Tax=Lep... 409 e-113 UniRef50_A5N6M6 Predicted oxidoreductase n=21 Tax=Clostridium Re... 409 e-113 UniRef50_B3EPX5 Ribosomal protein S12 methylthiotransferase rimO... 409 e-112 UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bactero... 409 e-112 UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 409 e-112 UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase... 408 e-112 UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bac... 408 e-112 UniRef50_C7MNF9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 408 e-112 UniRef50_D1C3B2 MiaB-like tRNA modifying enzyme n=1 Tax=Sphaerob... 408 e-112 UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 407 e-112 UniRef50_B8J4P8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 407 e-112 UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotro... 407 e-112 UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransfer... 406 e-111 UniRef50_B8E0G0 MiaB-like tRNA modifying enzyme n=2 Tax=Dictyogl... 405 e-111 UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmati... 405 e-111 UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 404 e-111 UniRef50_Q96SZ6 CDK5 regulatory subunit-associated protein 1 n=3... 404 e-111 UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=... 403 e-111 UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 403 e-111 UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 403 e-111 UniRef50_B0PFX8 Putative uncharacterized protein n=4 Tax=Clostri... 403 e-111 UniRef50_Q1MQJ5 Ribosomal protein S12 methylthiotransferase rimO... 401 e-110 UniRef50_A5GE34 MiaB-like tRNA modifying enzyme n=5 Tax=Geobacte... 401 e-110 UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Des... 400 e-110 UniRef50_A4SAH0 Predicted protein n=3 Tax=Mamiellales RepID=A4SA... 400 e-110 UniRef50_B2A5M5 RNA modification enzyme, MiaB family n=1 Tax=Nat... 400 e-110 UniRef50_A9HM32 MiaB-like tRNA modifying enzyme n=12 Tax=Alphapr... 400 e-110 UniRef50_Q726F7 Ribosomal protein S12 methylthiotransferase rimO... 400 e-110 UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=... 400 e-110 UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Aci... 400 e-110 UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransfer... 399 e-110 UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransfer... 399 e-109 UniRef50_Q29AM2 GA19527 n=9 Tax=Bilateria RepID=Q29AM2_DROPS 398 e-109 UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 398 e-109 UniRef50_C6X0V6 MiaB family protein, possibly involved in tRNA o... 398 e-109 UniRef50_D0J9M2 RNA modification protein n=1 Tax=Blattabacterium... 396 e-109 UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 396 e-109 UniRef50_Q1PXT1 Putative uncharacterized protein n=1 Tax=Candida... 396 e-108 UniRef50_B8DM03 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 395 e-108 UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO... 395 e-108 UniRef50_Q7VGP6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 395 e-108 UniRef50_D0LST9 RNA modification enzyme, MiaB family n=1 Tax=Hal... 394 e-108 UniRef50_A0LEL6 RNA modification enzyme, MiaB family n=1 Tax=Syn... 394 e-108 UniRef50_Q0AWM7 MiaB-like tRNA modifying enzyme n=1 Tax=Syntroph... 394 e-108 UniRef50_O66772 Putative methylthiotransferase aq_474 n=3 Tax=Aq... 394 e-108 UniRef50_D1AKP3 MiaB-like tRNA modifying enzyme n=17 Tax=Fusobac... 394 e-108 UniRef50_Q4FNN5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 394 e-108 UniRef50_Q9UXX9 Putative methylthiotransferase PYRAB17290 n=9 Ta... 394 e-108 UniRef50_D1PM52 2-methylthioadenine synthetase n=1 Tax=Subdoligr... 394 e-108 UniRef50_C7RAG6 MiaB-like tRNA modifying enzyme n=1 Tax=Kangiell... 394 e-108 UniRef50_Q3ZYS0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 394 e-108 UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms... 393 e-108 UniRef50_C1DVQ2 Putative uncharacterized protein n=3 Tax=Hydroge... 393 e-108 UniRef50_B4JIJ9 GH19109 n=4 Tax=cellular organisms RepID=B4JIJ9_... 393 e-108 UniRef50_A4YEI0 RNA modification enzyme, MiaB family n=3 Tax=Sul... 392 e-107 UniRef50_D0GPB7 Protein YqeV n=1 Tax=Leptotrichia goodfellowii F... 392 e-107 UniRef50_Q607P8 Putative uncharacterized protein n=2 Tax=Gammapr... 392 e-107 UniRef50_B9YB19 Putative uncharacterized protein n=1 Tax=Holdema... 392 e-107 UniRef50_C0R0S3 MiaB, 2-methylthioadenine synthetase n=2 Tax=Bra... 392 e-107 UniRef50_D2L881 RNA modification enzyme, MiaB family n=1 Tax=Des... 391 e-107 Sequences not found previously or not previously below threshold: >UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO n=48 Tax=cellular organisms RepID=RIMO_PSE14 Length = 447 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 311/446 (69%), Positives = 362/446 (81%), Gaps = 6/446 (1%) Query: 1 MSKVT--PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDS 58 MS VT PK+GFVSLGCPK LVDSERILT+LR EGY+VV +Y+DAD+V+VNTCGFID+ Sbjct: 1 MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT 60 Query: 59 AVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 A ESLE IGEA+ ENGKVIVTGC+G + IR+VHP VL +TGP YEQV+ VH VP Sbjct: 61 AKAESLEVIGEAIKENGKVIVTGCMGVDANVIRDVHPSVLSVTGPQQYEQVVNAVHDVVP 120 Query: 119 -KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + HNP + LVP QGVKLTPRHYAYLKISEGCNH C+FCIIPSMRG LVSRP+G+VL E Sbjct: 121 PRKDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 AKRLV +GVKE+LVISQDTSAYGVDVK+RTGF +G+PVKT M LC+ L +G+W RLHY Sbjct: 181 AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPVKTRMTELCQALGSMGVWVRLHY 240 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 VYPYPHVD++IPLMA GKILPYLDIP QHASP+ILKLMKRP D+ LARIK WRE CP+ Sbjct: 241 VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD 300 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-VPEEVK 356 L +RSTFIVGFPGETEEDFQ LLD+L EA+LDRVGCF+YSPVEGA AN L VP++VK Sbjct: 301 LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK 360 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 ++RW+RFM QQ ISA RLQ K+G+EI V+IDEVD+ GA+GR DAPEIDG V++ E Sbjct: 361 QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLEE 420 Query: 417 N--VKPGDILRVKVEHADEYDLWGSR 440 V+PGD + +V ADEYDLW Sbjct: 421 GSTVQPGDKIMCRVTDADEYDLWAEM 446 >UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO n=232 Tax=cellular organisms RepID=RIMO_PSYCK Length = 531 Score = 535 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 286/445 (64%), Positives = 350/445 (78%), Gaps = 9/445 (2%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 V PKIGFVSLGCPK LVDSERI+TEL +GY V Y+ AD+V+VNTCGFI+SAVQES Sbjct: 84 VNAAPKIGFVSLGCPKALVDSERIITELSRDGYQVASDYEGADLVVVNTCGFIESAVQES 143 Query: 64 LEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 L+AIGEA+++NGKVIVTGCLG + D+IRE+HP VL +TG H+Y+ V+ V +VPKP Sbjct: 144 LDAIGEAISKNGKVIVTGCLGKEADKIREMHPAVLAVTGAHAYDDVIRAVALHVPKPDCG 203 Query: 122 ----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++P + L+ E G+KLTP HYAYLKISEGCNHRCTFCIIPS+RGDLVSRPI V++E Sbjct: 204 LDASYDPKIDLINEAGIKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIDSVMNE 263 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A L AGVKE+L+ISQDTSAYG+D+K++T F NG P+K+ LC+ L+ LGIW RLHY Sbjct: 264 ALALKKAGVKELLIISQDTSAYGLDLKYKTSFWNGMPLKSKFYDLCQALNDLGIWVRLHY 323 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 VYPYPHVD V+ LM E K+LPYLDIP QHAS RILK MKRP + LARI WREICP+ Sbjct: 324 VYPYPHVDKVVELMGEKKLLPYLDIPFQHASHRILKAMKRPAHSENTLARIHAWREICPD 383 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + +RSTF+VGFPGETEEDFQ LLD+L EARLDRVG F YS VEGA AN LP+ VPE+VK+ Sbjct: 384 IVIRSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEVEGAVANDLPNHVPEDVKQ 443 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVYLNG- 414 ER+ R M LQQ ISA++LQEK+G+ ++V++DE+D E AI RS ADAPEIDG VY++ Sbjct: 444 ERYERLMTLQQDISAQKLQEKIGKTLMVLVDEIDREEGVAICRSYADAPEIDGHVYVDDI 503 Query: 415 ETNVKPGDILRVKVEHADEYDLWGS 439 + +VK G L V ++ A EYDL+ S Sbjct: 504 DAHVKVGQFLTVTIDDASEYDLFAS 528 >UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO n=47 Tax=Bacteria RepID=RIMO_DEIGD Length = 485 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 270/460 (58%), Positives = 338/460 (73%), Gaps = 24/460 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 PK+GF+SLGCPK LVDSERILT+LR EGY+V P+Y+DA VIVNTCGFI AV+ES Sbjct: 10 TVAAPKVGFISLGCPKALVDSERILTQLRAEGYEVAPNYEDAQAVIVNTCGFITPAVEES 69 Query: 64 LEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 L AIGEAL+ GKVIVTGCLG + ++I E HPKV ITG + + V+ HV +P + + Sbjct: 70 LSAIGEALDATGKVIVTGCLGERPEKILERHPKVAAITGSEAVDDVMAHVRELLP-IELD 128 Query: 124 PFLSLVP------------EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 PF L+P VKLTPRHYAY+KI+EGCNH C+FCIIP +RG VSR Sbjct: 129 PFTGLLPVAAPGMRQGDTLAPSVKLTPRHYAYVKIAEGCNHTCSFCIIPKLRGRQVSRDA 188 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 G VL EA RL+ G KE+++ISQDTSAYGVD++HRT GE V+ ++ L E+L ++G Sbjct: 189 GAVLYEAYRLIAGGTKELMIISQDTSAYGVDLRHRTSEFQGEQVRAHLIDLAEKLGEMGA 248 Query: 232 WTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 W R+HYVYPYPHV+ ++ LM++GKILPYLD+PLQHASP +LK M+RPG +QL I++W Sbjct: 249 WVRMHYVYPYPHVERIVELMSQGKILPYLDVPLQHASPAVLKRMRRPG-AGKQLDTIRRW 307 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 REICPEL +RSTFIVGFPGETEEDFQ+LLDFL+EARLDRVG F YS VE ADANAL + Sbjct: 308 REICPELVIRSTFIVGFPGETEEDFQLLLDFLEEARLDRVGAFTYSDVEEADANALDGAI 367 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-------GAIGRSMADAP 404 PEEVK+ER RFM++ Q+IS E+L EKVGR + VIIDE +++ IGR+ DAP Sbjct: 368 PEEVKQERLARFMEVAQRISREKLAEKVGRVLDVIIDEFNDDEGDEPGTRLIGRTKGDAP 427 Query: 405 EIDGAVYL---NGETNVKPGDILRVKVEHADEYDLWGSRV 441 IDG VYL + VK GDI++ ++E +DEYDL+G + Sbjct: 428 GIDGQVYLYAGDFAGQVKIGDIVQARIEDSDEYDLYGEVI 467 >UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Clostridiales RepID=RIMO_DESHY Length = 445 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 170/453 (37%), Positives = 263/453 (58%), Gaps = 27/453 (5%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T K+ V+LGCPKN VDSE + + T+ Y +V + AD++I+NTC FI+SA ES+ Sbjct: 3 TLNKKVAVVTLGCPKNQVDSEIMTGHMMTK-YQIVNEPEQADIIIINTCTFIESAKAESI 61 Query: 65 EAIGEA--LNENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I + E G+ ++ TGCL + D++ P++ I G + ++LE + Sbjct: 62 DMILQMSQYKEEGQCQTLVATGCLAQRYGDELLAEIPELDGIMGTGNVAEILETLEEAEK 121 Query: 119 KPKHN------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 F+ V+L+P+ YAY+K++EGC++ CT+CIIP +RG SR Sbjct: 122 SKVRRISAEAPAFIYDETMPRVRLSPKQYAYVKVAEGCDNYCTYCIIPHVRGHFRSRTQE 181 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 +L E + + GVKE+L+I+QDT+ YG D + + SL ++++++ Sbjct: 182 SILREVEAMASEGVKEVLLIAQDTTRYGKDRYG----------EYRLPSLIKEIARIEGI 231 Query: 232 -WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RL Y YP D++I +M E K+ YLD+PLQHA ++L M R G++ I Sbjct: 232 EWIRLMYCYPELFTDELITVMKETPKVCRYLDLPLQHAHDKVLAEMNRRGTIREAEGLIH 291 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + R+ P++ LR+T I GFPGETEE+FQ +++F K+ R DR+G F YS E A D Sbjct: 292 KLRQEIPDIRLRTTMITGFPGETEEEFQAVVEFAKKIRFDRLGAFAYSQEESTPAAQRED 351 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDG 408 QVPEE++++R ++ M+LQ I+ E+ Q VG+ + V+I+E + +GRS DAPEIDG Sbjct: 352 QVPEEIRQQRRDQLMELQHDIAYEQQQRWVGQTLKVLIEEALPDQRWVGRSEGDAPEIDG 411 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 VY++ ++ GD + VK+ AD YDL G V Sbjct: 412 VVYVDSPGELEIGDFVLVKITRADSYDLMGEVV 444 >UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Clostridiales RepID=RIMO_SYMTH Length = 485 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 177/451 (39%), Positives = 269/451 (59%), Gaps = 30/451 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+GF+SLGC KNLVD+E ++ LR GY + ++AD+++VNTCGFID+A QES++AI Sbjct: 20 KVGFISLGCAKNLVDTESMIGLLRNTGYQITNRAEEADVLVVNTCGFIDAAKQESVDAIL 79 Query: 69 EALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 EA + ++V GC+ + +++ P++ + G Y ++ E V + + Sbjct: 80 EAAQHKTRGRCQALVVAGCMVPRYGEELAREIPEIDALVGTADYPRIGEVVAGILAGQRV 139 Query: 123 NPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++ + V TP + AYLKI+EGC+ C FC IP MRG SRPI ++ E Sbjct: 140 QQISDPDSITDWNFERVLATPGYTAYLKIAEGCDCACAFCSIPLMRGRHRSRPIESIVDE 199 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A+RL GV+E++VISQDT+ YG+D+ K + L +L+++ W R+ Sbjct: 200 ARRLAGMGVRELVVISQDTTYYGLDLYR----------KPMLARLLRELAQVDGIRWIRI 249 Query: 236 HYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY YP D++I ++ E K+L YLD+PLQH S R+L++M RP + + L +++ RE Sbjct: 250 HYSYPTRITDELIEVIVTEPKVLNYLDLPLQHGSNRVLRIMNRPANAEGYLRLVQKLRER 309 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LRSTFI G PGETEEDF++LLDFL+ D VG F YS EG A + Q+PEE Sbjct: 310 VPDICLRSTFIAGHPGETEEDFELLLDFLRACEFDHVGVFAYSQEEGTKAGQME-QLPEE 368 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVY 411 V+ R +R M++QQ+I+ R Q +VGRE+ V+++ +G +GR +P IDG V Sbjct: 369 VRLARRDRAMEVQQEIARRRNQLQVGRELEVLVEGRSPQGRGWFVGRCYGQSPGIDGVVL 428 Query: 412 LNGETN--VKPGDILRVKVEHADEYDLWGSR 440 +KPGD+++V++ +YDL G Sbjct: 429 FRAPAGAELKPGDMVQVRITGVQDYDLLGEA 459 >UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO n=26 Tax=Bacteria RepID=RIMO_ALKMQ Length = 446 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 167/447 (37%), Positives = 265/447 (59%), Gaps = 25/447 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + SLGC KNL+D+E +L L GY + + AD++IVNTCGFI++A +ES+ I E Sbjct: 5 VYVESLGCSKNLIDAEVMLGILNQYGYKLTNNEVKADVIIVNTCGFIEAAKEESINKIIE 64 Query: 70 A----LNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 ++ +IV GCLG + + + E P+V I G Y ++++ +H + + Sbjct: 65 LGQLKKDKLKLLIVAGCLGERYQKDLLEELPEVDAIVGTGGYHEIVKVIHQTMKGQRIVE 124 Query: 125 FLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + ++ T H AY+KIS+GC++ CT+CIIP +RG SR + ++ EA+ Sbjct: 125 IGDINRPYDETLPRIQTTASHSAYIKISDGCDNYCTYCIIPKLRGKYRSRKMENIIQEAQ 184 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L + GVKEI++I+QDT+ YG+D+ + + +L ++LS++ W R+ Y Sbjct: 185 TLANNGVKEIILIAQDTTRYGIDLYD----------EYRLSALLDKLSEVEGIQWIRILY 234 Query: 238 VYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D++I + K+ Y+DIP+QH S +ILKLM R S + ++ I++ ++ P Sbjct: 235 CYPEMITDELIATIKNNDKVCKYIDIPIQHCSTKILKLMNRRTSKEEIVSLIEKLKKNVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + +R++ IVGFPGE+EEDF L F+++ + DR+G F YS EG A L +QVP E+K Sbjct: 295 NIVIRTSIIVGFPGESEEDFNELKAFIEDIKFDRLGVFTYSQEEGTPAAQLAEQVPSELK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAPEIDGAVYLNG 414 E R M+LQQ+IS + + +G+ I V+I+E ++ +GRS DAPEIDG VY+ Sbjct: 355 ESRQKILMELQQRISLNKNRLYIGQSIEVLIEEEIAEKTEYLGRSQGDAPEIDGIVYVKS 414 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + G I++VK+E+A EYDL G + Sbjct: 415 TVPLCVGQIVKVKIENALEYDLMGEGI 441 >UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Cystobacterineae RepID=RIMO_MYXXD Length = 476 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 173/455 (38%), Positives = 270/455 (59%), Gaps = 26/455 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M TP+ + ++LGCPKN VDSE +L LR GY +V DA +++VNTC FI A Sbjct: 1 METTTPKS-LYMMTLGCPKNRVDSEVMLGTLRHRGYTLVQEASDAQVIVVNTCAFIGPAK 59 Query: 61 QESLEAIGEALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 QES+++I E ++VTGCL + +++ + P+V G +Y Q+ + + Sbjct: 60 QESVDSILEMAELKKSGACKTLVVTGCLSQRYGEELSKEMPEVDHFLGTSAYAQIGDLLA 119 Query: 115 HYVPKPKHNP---FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + P ++ + P++ AYLKISEGC++ C FCIIP++RG SRPI Sbjct: 120 AEASPRQVIPDPDYIHDANTPRINSMPKYTAYLKISEGCDNACAFCIIPTLRGGQRSRPI 179 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 ++++EAK+L D+GV+E+ +++QD +AYG D+ P + + L + L ++ + Sbjct: 180 DDIVAEAKQLADSGVQELNLVAQDLTAYGHDL----------PGRPKLHDLLKALVQVDV 229 Query: 232 -WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RLHY YP D++I +MA E KI YLD+P+QH S ++L MKR + + + Sbjct: 230 KWIRLHYAYPRIFPDELIEVMASEPKIARYLDMPVQHVSDKLLLSMKRGRNSEFLKGLLT 289 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + RE P L +R++ IVG PGETEEDF+ML +F+K R +R+G F+YS EG A LPD Sbjct: 290 KLRERVPGLVMRTSLIVGLPGETEEDFEMLKEFVKTQRFERLGVFQYSDEEGTAAYDLPD 349 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEI 406 +VP+++ E RW M +Q++I+ E+ ++ VG+ + V+++ E +GR AP+I Sbjct: 350 KVPQKLIERRWREVMAIQKRINREQNKKLVGKRLEVLVEGPAPETEHLLVGRHQGQAPDI 409 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 DG VY+N + PG+I+ V+V A +YDL V Sbjct: 410 DGMVYIN-DGLAYPGEIVTVEVTEAHDYDLVARVV 443 >UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=190 Tax=Firmicutes RepID=MIAB_ANOFW Length = 527 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 117/449 (26%), Positives = 210/449 (46%), Gaps = 27/449 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N D+E + GY+ +DA+++++NTC ++A + I Sbjct: 84 RKFYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKVFGEI 143 Query: 68 GEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G N + + V GC+ +E ++I + V I G H+ ++ + Sbjct: 144 GHLKPLKQNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNIHRLPYILKEAYMS 203 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + ++ P+ A++ I GC+ CT+CI+P RG SR ++ Sbjct: 204 KEMVVEVWSKEGDVIENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDI 263 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 + E + L G KEI ++ Q+ +AYG D +K + L ++L K+ I Sbjct: 264 IQEVRHLAAQGYKEITLLGQNVNAYGKDFTD---------MKYGLGDLMDELRKIDIPRI 314 Query: 234 RLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P D +I ++A+G ++ ++ +P+Q S +LK+M R + ++ L +++ + Sbjct: 315 RFTTSHPRDFDDRLIEVLAKGGNLVEHIHLPVQSGSSEVLKMMARKYTREQYLELVRKIK 374 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E P + L + IVGFP ET+E F+ L +E D F YSP EG A + D VP Sbjct: 375 EAIPGVALTTDIIVGFPNETDEQFEETLSLYREVEFDSAFTFIYSPREGTPAAKMVDNVP 434 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 EVK+ER R L +ISA++++E G+ + V+++ + +A + V Sbjct: 435 MEVKKERLQRLNALVNEISAKKMKEYEGQVVEVLVEGESKNNPD--VLAGYTRKNKLVNF 492 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G + G ++ V++ A + L G V Sbjct: 493 VGPKSA-IGQLVNVRITEAKTWTLNGEMV 520 >UniRef50_A4WRD4 Ribosomal protein S12 methylthiotransferase rimO n=268 Tax=Bacteria RepID=RIMO_RHOS5 Length = 457 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 278/436 (63%), Positives = 328/436 (75%), Gaps = 10/436 (2%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 QP IG VSLGCPK LVDSERILT LR EGY + P Y AD VIVNTCGF+DSA ESLEA Sbjct: 29 QPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDYAGADAVIVNTCGFLDSAKAESLEA 88 Query: 67 IGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 IGEAL ENG+VIVTGCLGA+ D I HPKVL +TGPH YEQVL+ VH VP P +PF+ Sbjct: 89 IGEALRENGRVIVTGCLGAEPDYITGAHPKVLAVTGPHQYEQVLDAVHGAVP-PAPDPFV 147 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 L+P GV+LTPRH++YLKISEGCNH C FCIIP MRG LVSRP VL EA++LV+AGV Sbjct: 148 DLLPATGVRLTPRHFSYLKISEGCNHSCRFCIIPDMRGRLVSRPERAVLREAEKLVEAGV 207 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 +E+LVISQDTSAYG D K PV+ ++ L +L +LG W RLHYVYPYPHV + Sbjct: 208 RELLVISQDTSAYGTDWKG--------PVRFPILPLARELGQLGAWVRLHYVYPYPHVRE 259 Query: 247 VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 +IPLMAEG ILPYLDIP QHA P +LK M RP + R L I WR CP++TLRSTFIV Sbjct: 260 LIPLMAEGLILPYLDIPFQHAHPEVLKRMARPAAAARTLDEIAAWRRDCPDITLRSTFIV 319 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 G+PGETEE+FQ LLD+L EA+LDRVGCF+Y V GA +NALPD V E+K+ERW RFMQ Sbjct: 320 GYPGETEEEFQTLLDWLDEAQLDRVGCFQYENVAGARSNALPDHVAPELKQERWERFMQK 379 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN-GETNVKPGDILR 425 Q IS +L ++G+ + VI+DEVD EGA R+ ADAPEIDG ++++ G + PGD+L Sbjct: 380 AQAISEAKLAARIGQRLEVIVDEVDGEGATCRTKADAPEIDGNLFIDEGFEALSPGDLLT 439 Query: 426 VKVEHADEYDLWGSRV 441 V+VE A EYDLWG V Sbjct: 440 VEVEEAGEYDLWGRAV 455 >UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ61_9FIRM Length = 455 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 177/451 (39%), Positives = 269/451 (59%), Gaps = 27/451 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K GF+SLGC KNLVD+E +L L+ G ++ + +AD++IVNTC FI SA +ES+ I Sbjct: 1 MKAGFISLGCSKNLVDTEVMLGILKQHGIELTANPAEADILIVNTCAFIQSAKEESITTI 60 Query: 68 GEAL--NENGK---VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E+G+ +IV GCLG + ++ + P+ I G ++ +++E V + + Sbjct: 61 LNMAEYKESGRCRSLIVAGCLGQRYKQELLDEIPEADAIIGTGAWGRIMEAVEETLKGHR 120 Query: 122 -----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + L + TP + AY+KI+EGCN+RC FC IP +RGD SR I ++ Sbjct: 121 VVIAGKDEALYDENTPRITTTPSYTAYVKIAEGCNNRCAFCAIPYIRGDYRSRRIEDICD 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E + L + GV+E+++I+QD++ YG D+ + L ++ K+ W R Sbjct: 181 EVRHLTENGVREVVLIAQDSTEYGRDLYGAP----------KLSELLREIVKVPKLQWVR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 Y YP D++I +A E KI Y+D+PLQHA +L+ M+RP + + A IK+ RE Sbjct: 231 TLYSYPKYFSDELIETIASEPKICKYVDLPLQHAHDAVLRSMRRPDTQEEMRALIKKLRE 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P +T+RSTFIVGFPGET+ + L +F++E RLD+VG F YS EG A +P+QVPE Sbjct: 291 RIPGVTIRSTFIVGFPGETDAQYHTLRNFIEEMRLDKVGVFTYSREEGTPAYDMPNQVPE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAV 410 E+ +ER++ M LQ +IS + Q G+E+ V+++ DEE +GRS +APE+DG V Sbjct: 351 EIMQERYHDLMSLQCKISEQINQSLEGKELDVLVEGRDEEQPNISVGRSYREAPEVDGQV 410 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 Y+ +T+ KPGDI+RV+V YD+ G R+ Sbjct: 411 YVENDTDSKPGDIVRVRVLQGFTYDIVGERI 441 >UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Bdellovibrio bacteriovorus RepID=RIMO_BDEBA Length = 457 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 179/460 (38%), Positives = 262/460 (56%), Gaps = 25/460 (5%) Query: 1 MSKVTPQ-PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 M + T Q K+ F+SLGCPKNLVDSE + L +GY+VV D AD VIVNTCGFI+ + Sbjct: 1 MKQETAQNKKVHFISLGCPKNLVDSEIMAGTLMKDGYEVVGEADQADTVIVNTCGFIEDS 60 Query: 60 VQESLEAIGEALN-----ENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV 113 +ES++ I + + + KV+V GCL + D + E P+ G ++ + + + Sbjct: 61 KKESIQRILDMSDLKQEGKIKKVVVAGCLTQRYKDDLVEGLPEADLFVGSGEFQNIAKIL 120 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPR------HYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + K F +L + TPR H AYLKISEGC RC FC IP +RG+L Sbjct: 121 KNSDEGEKQKTFFNLPTYLQEEATPRVNSQPGHRAYLKISEGCMKRCAFCAIPLIRGNLQ 180 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I +++EAK LV GVKE+++IS D + YG D++ + P V L + L Sbjct: 181 SRSIDAIVAEAKLLVAGGVKELIIISHDFTDYGFDIRRKDPTRKESP-----VELLKALD 235 Query: 228 KLGI--WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 ++ W RL Y+YP +++ ++ KI+ Y D+PLQH + ++LK M R + D Sbjct: 236 QVEGLQWIRLMYLYPDGITQEMVQVIKNSTKIVKYFDMPLQHVNDQVLKSMNRKMTRDEI 295 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 + RE PE +R+ FIVGFPGET+E F+ LL+F+ E + DRVGCFKYSP E Sbjct: 296 ETALMNIREHLPEAVIRTQFIVGFPGETQEQFEELLNFVAEQQFDRVGCFKYSPEENTPG 355 Query: 345 NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMA 401 + +Q+ EE K+ R + M++QQ IS E+ + VG+ + VI++ EE + GR Sbjct: 356 GRMENQIDEETKQYRHDALMEVQQNISREKHSDFVGKTLQVIVEGFSEETDLLLQGRFWG 415 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 AP+IDG V +N + + GD+++V + EYDL G V Sbjct: 416 QAPDIDGVVLIN-DGQAQVGDMVKVHITDNMEYDLIGEIV 454 >UniRef50_C4Z0L1 2-alkenal reductase n=16 Tax=Bacteria RepID=C4Z0L1_EUBE2 Length = 450 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 163/454 (35%), Positives = 254/454 (55%), Gaps = 26/454 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M +V KI F SLGC KNLVD+E +L L +G++ AD+++VNTC FI A Sbjct: 1 MQEVMQYMKIMFASLGCDKNLVDTENMLGILNDKGFEFTDDETQADVIVVNTCCFIGDAK 60 Query: 61 QESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 QES+ I E +IVTGCL + D+I + P+V G SY+++ E V Sbjct: 61 QESINTILEMAQHKEDAVCKALIVTGCLAHRYKDEIIKEIPEVDAFLGTTSYDKIAEVVT 120 Query: 115 HYVPKPKHNPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + N L +V E+ + TP ++ YLKI+EGC+ CT+CIIP +RG+ S Sbjct: 121 SVLEGKGFNVVDDANRLPIVKEKRIITTPGYFEYLKIAEGCDKHCTYCIIPKVRGNFRSY 180 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ ++ +AK LV G KE+++++Q+T+ YG D+ K S+ L +L+K+ Sbjct: 181 PVEYLVEQAKHLVHNGAKELILVAQETTLYGTDLYG----------KKSLPMLIHELAKI 230 Query: 230 G--IWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W R+ Y YP D++I + E K+ YLD+P+QHAS +LK M R L Sbjct: 231 EDLKWIRIQYCYPEEINDELIEAIKNEPKVCHYLDMPIQHASDNVLKRMGRKTDKQELLD 290 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R+ P++ LR+T I GFPGET+ D + +++F+ E DR+G F YS E A Sbjct: 291 IVAKLRKEIPDIALRTTLIAGFPGETQADHEEVMEFIDEIEFDRLGVFTYSREEDTPAAT 350 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAP 404 +PDQ+ +++ + + M LQQ+IS ++ + VG+ I V+++ ++ +GRS DAP Sbjct: 351 MPDQIDQDIMDTWRDELMALQQEISIDKSAQMVGKTIDVMVEGYIAEDNTYVGRSYKDAP 410 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 +DG V+ + + GD + VK+ + EYDL G Sbjct: 411 NVDGMVFFECDRELMSGDFVSVKITSSTEYDLMG 444 >UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridia RepID=B9MJU1_ANATD Length = 471 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 223/454 (49%), Gaps = 34/454 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 K V+ GC N+ DSE++ L GY + +AD++I NTC + A Sbjct: 34 KNKKYHIVTYGCQMNVHDSEKLAGMLNAMGYIETENIQEADLIIFNTCSVREHAESRVYG 93 Query: 66 AIG-----EALNENGKVIVTGCLGAK---EDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 IG + + V V GC+ + ++ ++ P + I G S + + ++ + Sbjct: 94 NIGPLKRLKEKKPDLIVGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQLLYTAI 153 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + K +S + V+ P A++ I GCN+ C++CI+P +RG SR Sbjct: 154 TEKKTVIEVSEDEDVVVEGIPTARRQGVSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPE 213 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 E++ E ++L G+KE+ ++ Q+ ++YG D+ + + L E+++++ Sbjct: 214 EIIYEIEQLAQNGIKEVTLLGQNVNSYGKDLGNSI----------TFPKLLEKVNEIKGI 263 Query: 233 TRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ +V +P D++I M + K+ ++ +P+Q S RILK M R + + L ++ Sbjct: 264 ERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLVE 323 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + + P++ + + IVGFPGET+EDF+ LD ++ D F YS G A +P+ Sbjct: 324 KLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVEFDSAYTFIYSKRRGTPAEKMPN 383 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPEID 407 QVP+++K +R+ R ++L ++I+ ++ ++ +G+ ++ID + + GR+ + Sbjct: 384 QVPDDIKYQRFQRLVKLVEEIALKKNRQMLGKTYEILIDSHSKRNNLLAGRTRTNK---- 439 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + VK+ A E+ L+G + Sbjct: 440 -VVNVKCSEEFMF-KFVNVKIFEAAEHWLYGEVI 471 >UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Clostridia RepID=MIAB_SYMTH Length = 470 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 124/457 (27%), Positives = 218/457 (47%), Gaps = 26/457 (5%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 P+P++ + GC N DSE + L GY DDAD+++ NTC +SAV+ Sbjct: 15 HGKPEPRVHIETFGCQMNEHDSEIMYGILAQMGYVKAQGPDDADLLLFNTCAVRESAVEH 74 Query: 63 SLEAIGEAL-----NENGKVIVTGCLGAKEDQ---IREVHPKVLEITGPHSYEQVLEHVH 114 + IG+ N + + V GC+ E Q I+ + P + I G H+ ++ E V Sbjct: 75 AFGRIGQLKPLKYTNPDLIIGVCGCVPQVEGQVERIKRMFPYLDLIFGTHNIHRLPELVE 134 Query: 115 HYVPKPKHNP-FLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + + + + P A++ I GC+ CT+CI+P+ RG S Sbjct: 135 RARSERETVVDVWESMGDDFPDILPAAREGDLKAWVTIMYGCDKHCTYCIVPTTRGKERS 194 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP +L+E + L G KEI ++ Q+ +AYG D+ R G G ++ L ++ S Sbjct: 195 RPYEVILAEVQELARQGFKEITLLGQNVNAYGKDLYGRHG--EGAFDFGDLIELIDRNSP 252 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 R +P ++ +A K+ + +P+Q S +L+ MKR + + L Sbjct: 253 GIERIRFTTNHPKDFTRKMVEQIARAEKVCEWFHLPVQSGSDSVLRRMKRSYNRKQYLRL 312 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + RE+ P+ + + IVGFPGETEE+FQ L ++E + D F YS G A + Sbjct: 313 VGWIRELIPDAVITTDIIVGFPGETEEEFQETLSLVEEVQYDAAFMFMYSERAGTPAAQM 372 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAP 404 D++ K+ER R M++Q +I+ + + +VG+ ++++ +D+ + G + + Sbjct: 373 EDRLSVPEKKERLQRLMEVQNRIARAKNEARVGKVYDILVEGLDKGKPDVVFGWTRGNI- 431 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V G+ +++ G I+ V++ A + L G V Sbjct: 432 ----LVTFPGDESLR-GRIVPVRITRAGTWTLEGELV 463 >UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_CLOTH Length = 480 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 126/457 (27%), Positives = 221/457 (48%), Gaps = 36/457 (7%) Query: 5 TPQPKIG-FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 T + K+ + GC N DSE++ L GY + +++D+VI NTC ++A + Sbjct: 39 TGKKKLYCLNTFGCQMNEHDSEKLAGMLAEMGYAETDNVNESDLVIYNTCCVRENAELKV 98 Query: 64 LEAIGEAL-----NENGKVIVTGCLGAKED---QIREVHPKVLEITGPHSYEQVLEHVHH 115 +G + + V GC+ + + I++ + V I G H+ + E ++ Sbjct: 99 YGHLGMLKPLKNQKPDLVIAVCGCMMQQPEVVEHIKKTYSHVDLIFGTHNLYKFPELLYS 158 Query: 116 YVPKPKHNPFL-----SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + + ++ A++ + GCN+ CT+CI+P +RG SR Sbjct: 159 AMDSQTTVVDVWDCDGQIAENVAIERKDGVKAWVTVMYGCNNFCTYCIVPYVRGRERSRS 218 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 + ++L E + L G KEI ++ Q+ ++YG D+ TS L +++K+ Sbjct: 219 MDDILEEVRMLGRQGFKEITLLGQNVNSYGKDIGD----------GTSFAELIREVNKIP 268 Query: 231 IWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 R+ + +P DD+I M + K+ +L +P Q S RILKLM R + + + Sbjct: 269 GIERIRFTTSHPKDLSDDLIYAMRDCEKVCEHLHLPFQAGSTRILKLMNRKYTKEDYINL 328 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + + +E P++ L + IVGFPGETEEDF LD L++ R D F YS G A + Sbjct: 329 VAKIKENIPDIALTTDIIVGFPGETEEDFSDTLDILEKVRFDNAYTFLYSKRTGTPAAKM 388 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAP 404 DQVPEEVK+ER+ R ++ Q +IS E +G+ + V+++ V + + GR+ + Sbjct: 389 EDQVPEEVKKERFQRLLETQNRISKEINDTFLGKVVEVLVEGVSKTNDKIFTGRTRGNK- 447 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + ++ G ++ V++ + L GS V Sbjct: 448 ----VVNFEADASL-IGKLVNVRINTVKTWSLEGSIV 479 >UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Clostridia RepID=MIAB_PELTS Length = 448 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 134/452 (29%), Positives = 218/452 (48%), Gaps = 36/452 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K + GC N DSE + L + GY + +D D++++NTC +A + Sbjct: 1 MKKYRIIVFGCQMNEHDSEVLAGILESMGYCQAGNSEDPDIILINTCCVRKTAENKVFSL 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 +G N N + V GC+ +E ++I+++ P V I G H+ Q+ E + + Sbjct: 61 LGRLRRQKAQNPNLIIGVCGCMPQQEGMAERIKQLFPHVDLIFGTHNVHQLPELIGKVIE 120 Query: 119 KPKHNPFL------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K + L E VK A++ I GCN+ CT+CI+P +RG SR Sbjct: 121 GQKQVLEIWPGYGGELREELPVKRKEGVRAWVTIMYGCNNFCTYCIVPYVRGREKSRSPE 180 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 V E RL G KE++++ Q+ ++YG D+ VKT SL E L + Sbjct: 181 AVYEEVARLAGEGFKEVILLGQNVNSYGKDLG----------VKTDFASLLESLENIDGI 230 Query: 233 TRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ Y+ +P ++ +A K+ + +P+Q S RILK M R + + + I+ Sbjct: 231 DRIRYMTSHPRDFSLRLVEAIAASKKVCEHFHLPVQAGSNRILKKMNRGYTREEYVDLIR 290 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + + P T+ + +VGFPGET+EDF LD ++E R D F Y+ G A +PD Sbjct: 291 YIKSLIPHATVTTDIMVGFPGETDEDFNDTLDLVREIRFDSAYTFVYNIRPGTPAAEMPD 350 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEI 406 QV E VK+ER ++LQ +IS ER +E+VG+ V+++ + G+ GR+ + Sbjct: 351 QVAENVKKERIQALIKLQNKISLERNEEEVGQTQEVLVEGEKDRGSGFIYGRNRGNKT-- 408 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 V +G+ ++ G ++ V V A L G Sbjct: 409 ---VIFSGDPSL-VGKVVPVTVTGARLAHLTG 436 >UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacillus RepID=D2LS97_BACS4 Length = 516 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 120/459 (26%), Positives = 212/459 (46%), Gaps = 33/459 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + K + GC N DSE + L G++ + DDAD++++NTC ++A Sbjct: 66 MQAIGKGKKFLIRTYGCQMNEHDSENMAGILLNMGFESTSNSDDADVILLNTCAIRENAE 125 Query: 61 QESLEAIGEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEH 112 + IG V V GC+ +E ++I + H V I G H+ ++ Sbjct: 126 NKVFGEIGHLKTMKRERPELIVGVCGCMSQEESVVNRILQKHQHVDLIFGTHNIHRLPTL 185 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLV 167 + + + + + ++ PR ++ I GC+ CT+CI+P RG Sbjct: 186 LKNAIFNKEMVVEVWSKEGDIIENMPRARKGQIQGWVNIMYGCDKFCTYCIVPYTRGKER 245 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR +++ E + L G KEI ++ Q+ +AYG D+ + + L +++ Sbjct: 246 SRRPEDIIEEVRHLARNGYKEITLLGQNVNAYGKDLVD---------MDYGLGDLMDEIR 296 Query: 228 KLGI-WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 K+ I R +P D +I ++A+G ++ ++ +P+Q + +LKLM R + + + Sbjct: 297 KIDIPRVRFTTSHPKDFDDHLIEVLAKGGNLVEHIHLPVQSGNSDVLKLMARKYTREEYV 356 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 K+ +E P + + IVGFP ET+ F+ L ++E D + YSP EG A Sbjct: 357 TLAKKIKEAIPHASFTTDIIVGFPNETDAQFEDTLSLVREMEYDSAYTYVYSPREGTPAA 416 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMAD 402 + D +P EVK+ER R L +ISAE+ + GR + V+++ ++ GR+ + Sbjct: 417 KMNDNIPMEVKKERLQRLNALVNEISAEKNKSYQGRVVEVLVEGESKKNPDILAGRTRTN 476 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V G + G+I+ VK+ A + L G V Sbjct: 477 R-----LVNFKGAKS-SIGEIVYVKITEAKSWSLDGHVV 509 >UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR79_9FIRM Length = 478 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 128/460 (27%), Positives = 217/460 (47%), Gaps = 34/460 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 + +V+ K + GC N D+ERI +L GY DDAD+VI+NTC +A Sbjct: 33 LKEVSFDKKYFIETYGCQMNESDTERISGQLEELGYVPADILDDADVVILNTCSIRQNAE 92 Query: 61 QESLEAIGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH 114 ++ IGE GK + + GC+ + + ++ E P + + GP+ + + V Sbjct: 93 EKVYGKIGEVKKLKGKKPGVLLGIAGCMAQENKGKLIERMPVIDFVIGPYHIHDLKDIVS 152 Query: 115 HYVPKPKHNPFLSLVPEQGVKLT-------PRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + H + P + + R +A++ I +GCN CT+CI+P +RG Sbjct: 153 RRGAEGSHVVMTQMNPNRVNDYSELHSVRKSRIFAWVPIMQGCNKFCTYCIVPYVRGRET 212 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I ++ E ++L G KEI ++ Q+ ++YG+D T SL + Sbjct: 213 SRTIDDICREIEKLAREGYKEITLLGQNVNSYGLDFHD----------GTDFGSLIHAID 262 Query: 228 KLGIWTRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 K+ R+ Y+ +P ++ MA K++ ++ +P+QH + IL+ M R +++R Sbjct: 263 KIDGIKRVRYMTSHPKDMTFGMVDAMAASPKVVRHMHLPVQHGANEILRRMNRGYTIERF 322 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 +K RE P +T+ + I GFPGETE+ + L LKE + D F YSP G A Sbjct: 323 KELLKYVREKMPGITVTTDLITGFPGETEDMHEETLTLLKEMKFDSAYTFIYSPRRGTPA 382 Query: 345 NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMA 401 + +QV + V R M ++ +IS +E G+ VI + + + GR+ Sbjct: 383 ARMTNQVSDAVCHRRLQEIMNVENEISLSLNKEMEGKVYTVIAEGETKQNPDNWFGRTSG 442 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + V ++ GDIL+V+V+ A + L G+ V Sbjct: 443 NK-----MVIFPKAGSLSVGDILKVRVDTAQTWILKGTIV 477 >UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIQ8_9FIRM Length = 444 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 128/448 (28%), Positives = 225/448 (50%), Gaps = 34/448 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES---LEAI 67 + GC N D+ER++ +LRT GY+ S ++AD++++NTC ++A + I Sbjct: 13 YLLVYGCQMNQSDAERMMGQLRTIGYERTESMEEADLILINTCCVRETAEDRVYGKIGEI 72 Query: 68 GEALNENGKVI--VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 EN ++I +TGC+ KE D + + P + + G + ++ V + H Sbjct: 73 KRLKRENPELIFGITGCMAQKEGDALIKRAPHIDFVLGTNKVHELTHVVQEIQAEHGHVV 132 Query: 125 FLSLVPEQGVKLTPRHYA-----YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + L + P A ++ I GCN+ CT+CI+P +RG SR +++ E + Sbjct: 133 DVQLGETELPDDVPVARAGSLSAWVPIMYGCNNFCTYCIVPYVRGRERSRLPEDIVHEVE 192 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 V G +E+ ++ Q+ ++YG D K L + + K+ R+ ++ Sbjct: 193 EAVKNGYEEVTLLGQNVNSYGKDHK-----------LADFADLLKMVDKVPGIRRVRFMT 241 Query: 240 PYPH--VDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +P D VI + +G+ + ++ +P+Q+ S RILK M R +V+ +++ R P Sbjct: 242 SHPKDLSDKVIAAIRDGEHLCEHIHLPVQYGSNRILKAMNRVYTVESYRDLVRRIRAAIP 301 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +++L + IVGFPGET+EDFQ +LDFL+E R D F YS G A + +QV E VK Sbjct: 302 DVSLTTDLIVGFPGETDEDFQQMLDFLREIRYDSAYTFIYSKRSGTPAATMENQVDESVK 361 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLN 413 +ER N M +Q +IS ++ +G+ + ++++ + +GR+ + + L Sbjct: 362 KERLNALMAVQNEISLAINEKLLGKTLEIMVEGPSKNEPSVWMGRTRTNK------IVLF 415 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 KPGD + V++ H + L G RV Sbjct: 416 AHAGEKPGDFIDVRITHPQTWVLKGERV 443 >UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Bacteria RepID=RIMO_HELMI Length = 460 Score = 463 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 176/449 (39%), Positives = 244/449 (54%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI SLGC KN VD+E ++ LR GY++ +DA +++VNTCGFI A +ES++ I Sbjct: 18 MKIHITSLGCAKNRVDTEVMMGLLREAGYELTQREEDAHVLLVNTCGFILPAKEESIQTI 77 Query: 68 GEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E ++V GCL ++ P+V GP +V V + + Sbjct: 78 LELARYKETGRCRALLVAGCLPQGYAGELAAELPEVDAFFGPGDVPRVTSIVAEVLRGKR 137 Query: 122 HNP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 FL V TP HYAY+KI++GC++RC +C IP++RG SR ++ Sbjct: 138 SLEVGKPDFLYDHTMPRVLSTPFHYAYVKIADGCDNRCGYCAIPNLRGRFRSRSEESIVE 197 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E + LVD G++E L+I+QDT+ YGVD + L +L+ + W R Sbjct: 198 ETRSLVDRGIQEALLIAQDTTCYGVDRYGEF----------RLAQLIGKLASIDGLRWIR 247 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y YP ++I MA E K+ Y+D+PLQHA +L+ M R VD I+ RE Sbjct: 248 LMYCYPSHFTPELIEAMAAEPKVCRYVDLPLQHADDELLRSMNRHAGVDEIRRLIRTLRE 307 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P L +R++FIVG PGETEE FQ LLDFL E R DRVG F YS E A L DQVPE Sbjct: 308 RLPGLAIRTSFIVGLPGETEEKFQRLLDFLAEMRFDRVGIFTYSREENTPAGKLADQVPE 367 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYL 412 EVKEER++R M LQQ+IS QE +G+ + V+++E G GRS +APE+DG + Sbjct: 368 EVKEERYHRAMVLQQEISLSIQQEWIGKTLEVLVEEEVAPGLYRGRSEREAPEVDGHIEF 427 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G + G+ V++ A YDL G + Sbjct: 428 KGRHRM-IGEWANVRITAASHYDLMGEAI 455 >UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RIMO_CARHZ Length = 438 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 159/446 (35%), Positives = 261/446 (58%), Gaps = 22/446 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K +SLGC KN DSE I+ L ++GY + +++D++IVNTCGFI +A++ES+E I Sbjct: 1 MKYFILSLGCTKNQADSEVIMGILESKGYVRSLNPEESDLLIVNTCGFIAAAIEESIEEI 60 Query: 68 G---EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSY---EQVLEHVHHYVPKP 120 K++V GCL +E ++ + P+V P +++L + Sbjct: 61 LNLVHLKKPGQKILVAGCLVQREGKELAKHLPEVDLFFTPREINNLDKLLADLGENNKLV 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P + ++ + Y Y+KI++GC++RCT+C IP++RG SRP+ ++L E K Sbjct: 121 LSEPGFLNLEKKPRAKSNEVYRYIKIADGCDNRCTYCTIPAIRGKYTSRPLDDILEEIKD 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYV 238 + G+KEI++++QDT+AYG+D+ +V L ++ + W RL Y+ Sbjct: 181 TLKQGIKEIILVAQDTTAYGIDLYGEF----------KLVELLRKIGSIKGNFWVRLMYL 230 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP ++I + E K++ Y+D+PLQH P ILK M R GS + ++ +++ R+ P+ Sbjct: 231 YPDKITPELINEIKENPKVIKYVDVPLQHIHPEILKKMGRKGSSEEIISTLERLRKEIPD 290 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 +T+R+TFIVGFPGETEE F LLDF+K+ + +R+G F Y +G A + Q+P++VKE Sbjct: 291 ITIRTTFIVGFPGETEEQFNYLLDFVKKFKFNRLGAFPYYREKGTPAAKMKGQIPKKVKE 350 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDE--VDEEGAIGRSMADAPEIDGAVYLNGE 415 +R+ + M++QQ+IS + VG++I VI+++ E +GR+ DAPEIDG + + E Sbjct: 351 QRYEKLMEVQQEISLNLNKALVGKKIPVIVEKKIRGENLYLGRTYMDAPEIDGIIEIKAE 410 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 +K G I+ V + D YDL G + Sbjct: 411 KRLKKGQIINVLITDYDIYDLKGEFI 436 >UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF18_BREBN Length = 448 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 174/456 (38%), Positives = 264/456 (57%), Gaps = 26/456 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 KV + K+ V+LGC KNLVDS+ + + +GY++V + ++A +VIVNTCGFID+A + Sbjct: 3 EKVGTREKVAIVTLGCEKNLVDSDMMAHLIDEKGYELVDNPEEATVVIVNTCGFIDAAKE 62 Query: 62 ESLEAIGEA--LNENGKV---IVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHH 115 ES+ I E L E+GK+ +V GCL + + I P+V I G + + + Sbjct: 63 ESVNKILEMGELKESGKLKSLVVAGCLTQRYKEDILNEIPEVDGIVGTGDFMSITGIIEE 122 Query: 116 YVPKPK----HNPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + NP + K+ Y AY+KI+EGC++ CTFC IP MRG SR Sbjct: 123 SLEGKRPIFVGNPIFTYEDVVKRKVKQGTYTAYIKIAEGCDNACTFCSIPLMRGGFRSRT 182 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I ++ EA+ L GV E+ +I+QD++ YG D+ K + L +L+++ Sbjct: 183 IESIVEEARHLAAQGVVEVSLIAQDSTNYGTDIYD---------GKLMLPELLNRLAEVE 233 Query: 231 I--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 W RLHY YP D++I A K+ Y+D+PLQH+ ILK M+RPG A Sbjct: 234 GIEWIRLHYAYPGFFTDELIHTFATNPKVCKYVDMPLQHSEDHILKRMRRPGRQTDIRAL 293 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + + R P++ LR++ IVGFPGETEEDF+ L +F+K+ R DR+G F YS + A+ L Sbjct: 294 VAKIRAQVPDVALRTSLIVGFPGETEEDFERLSEFVKDIRFDRLGVFTYSNEDDTPASRL 353 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPE 405 PD V EEVKE+R N M++Q++++ +R VG+ + V+I+ + +GR+ DAPE Sbjct: 354 PDHVDEEVKEKRANMLMEIQREVAGDRNGRFVGQVLDVLIERYEGRNDIYVGRTQYDAPE 413 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 IDG V++ G + G +++VK+ H+ EYDL G V Sbjct: 414 IDGEVFVTGFKG-ELGTVVKVKITHSYEYDLAGEVV 448 >UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotransferase n=3 Tax=Cyanobacteria RepID=UPI0001C33830 Length = 439 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 172/449 (38%), Positives = 265/449 (59%), Gaps = 23/449 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + +P I LGC KN +DSE IL L EGY V + + AD V+VNTC FI A +ES Sbjct: 1 MVKKPAIAISHLGCEKNRIDSEHILGLLAAEGYSVSSNENLADYVVVNTCSFIQQAREES 60 Query: 64 LEAIGEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVL------EHVHHY 116 + + E N K+I+ GC+ +DQ+ E P+V+ I G +Y++++ E Sbjct: 61 VRTLVELAENNKKIIIAGCMAQHFQDQLLEELPEVVAIVGTGNYQEIVKTVQRVELGERV 120 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + F++ + T AYL+I+EGCN+RCTFCIIP +RG+ SR I +++ Sbjct: 121 IDISQKPTFIADETVPRYRTTNEGVAYLRIAEGCNYRCTFCIIPHLRGNQRSRTIESIVA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRL 235 EA++L + GV+EI+++SQ T+ YG+D+ K + L + L K+ + W R+ Sbjct: 181 EAQQLANEGVQEIIIVSQITTNYGLDLYG----------KVKLAELLQALGKVNVPWIRV 230 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY YP +V+ + E ++PYLD+PLQH+ P+ILK M RP IK R Sbjct: 231 HYAYPTGLTAEVLKAVKEVPNVIPYLDLPLQHSHPKILKAMNRPWKEAINDEIIKSIRAS 290 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LR+TFIVGFPGET+E F+ L+ F+K D VG F +SP EG + +PDQVP E Sbjct: 291 IPDVVLRTTFIVGFPGETDEYFEHLVKFIKRHHFDHVGVFVFSPEEGTPSYKMPDQVPLE 350 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYL 412 + +ER + M++QQ IS + Q+ VG+ + V+I++ + + IGRS+ +P++DG V++ Sbjct: 351 IAQERRDYLMEIQQPISNRKNQQYVGKIVKVLIEQENTKTHQYIGRSIKSSPDVDGVVFV 410 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ + I+ V++ AD YDL+G V Sbjct: 411 KGKAQLN--SIIPVEITKADAYDLYGKVV 437 >UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Firmicutes RepID=MIAB_NATTJ Length = 451 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 35/452 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K ++ GC N DSE + L G++ S ++AD++I+NTC + A Q+ L I Sbjct: 10 KKFYTLTFGCQMNEHDSEVLAGMLDQMGFEKAASEEEADLLIINTCAVREKAEQKVLGKI 69 Query: 68 GEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + K+ + GC+ +E ++I V I G H+ + + + H + K Sbjct: 70 GTLRYLKENKPDMKIAIGGCMVQQEHVANKIYRDFTHVDIIFGTHNINRFPQLLEHVMQK 129 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K +S Q + P A++ IS GC++ C +CI+P +RG SR + Sbjct: 130 GKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVRGQQRSRDPEHI 189 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 E ++L G+KEI ++ Q+ ++YG D+ F N L E+LSK+ R Sbjct: 190 KYEVEKLAKEGLKEITLLGQNVNSYGKDLDQNISFTN----------LLEELSKIEGIER 239 Query: 235 LHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + ++ +P ++I + E KI + +P+Q S +ILK M R + + + + Sbjct: 240 IRFMTSHPKDFDKELITTLKESNKICEHFHLPVQAGSNKILKKMGRGYTREHYVDIVNDI 299 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P ++ + IVG+PGE EEDFQ LD ++ + D F YS G A + +QV Sbjct: 300 RAELPNASITTDIIVGYPGEEEEDFQETLDLVQNVKFDSAFTFVYSKRSGTPAAEMAEQV 359 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDG 408 E+ K+ R + + +QQ+IS +R ++ ++++ V +E+ GR+ D Sbjct: 360 DEQTKKGRIQKLISVQQEISEQRNKDLENTVQRILVEGVSKNNEDMLSGRTRT-----DK 414 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ G+ + G+++ VK+ ++L+G Sbjct: 415 LVHFPGDKEL-IGELVDVKITRGHSWNLYGEI 445 >UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=MIAB_DICT6 Length = 440 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 119/449 (26%), Positives = 213/449 (47%), Gaps = 28/449 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 PK ++ GC N DSE++ L GY ++AD++++NTC + A ++ Sbjct: 1 MPKYYIITYGCQMNKSDSEKVAGILENLGYTPSEKMEEADIILLNTCSVRERAEEKVFGK 60 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +GE + + + GC+ + ++++ E P V + G + + ++ + + K Sbjct: 61 LGELRKLKKRNQNLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKILESLDGKK 120 Query: 121 K-----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K P V + +K + A++ I GCN+ CT+CI+P +RG SR E++ Sbjct: 121 KVVLAEDIPSPQDVDFRVIKRENKFQAWIPIIYGCNNFCTYCIVPYLRGREKSRDPEEII 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E + L GV E+ ++ Q+ +YG D+ + + L ++ ++ R+ Sbjct: 181 REVEYLASQGVVEVTLLGQNVDSYGKDLGN-----------VDLADLLVEIHRIPRIKRI 229 Query: 236 HYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 ++ +P D +I ++A K+ P+ +PLQ S RIL+ M R + A I++ R Sbjct: 230 RFLTSHPRDVSDKLIRVVATHPKVCPHWHLPLQAGSDRILRRMGRGYTYSEYKALIEKIR 289 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P+ + + IVGFPGE EEDF L+E + D V YS G A D +P Sbjct: 290 AEIPKASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAANYEDLIP 349 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 E K+ ++ LQ++I E+ +VG+E +V+ +EV+ + R ++ E V+ Sbjct: 350 YETKKRWFDELENLQRKIIYEKNLSRVGKEEIVLAEEVNPKNP--RELSGRTENYRLVFF 407 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 E + G L VK+ A + L G + Sbjct: 408 EAEKEL-IGKFLLVKITEARLWSLKGEVI 435 >UniRef50_A9F1Y8 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Myxococcales RepID=RIMO_SORC5 Length = 488 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 169/450 (37%), Positives = 256/450 (56%), Gaps = 20/450 (4%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 K+ FVSLGCPKN VDSE +L R G+ V +A++++VNTCGFI A +ES++ Sbjct: 2 SSRKVHFVSLGCPKNRVDSEVMLGVARAAGFAHVDDAAEAEVIVVNTCGFIGEAKKESID 61 Query: 66 AIGEALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHS---YEQVLEHVHHY 116 AI E +++V GCL + +++ P+V G +VL Sbjct: 62 AIFEMAQHKEHGSCKRLVVAGCLSQRHPEELAREMPEVDHFLGSSDMLKLGRVLAGDAER 121 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + +L + TP AY+KI+EGCN C+FC+IP +RG SRPI +V+ Sbjct: 122 MLVGNPAEWLIQAGDPRTLSTPGGSAYVKIAEGCNRTCSFCVIPDLRGAQRSRPIPDVVR 181 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E ++L AGV+EI +ISQDT AYG D R+ + ++ L E+++ + W R Sbjct: 182 EVEQLAAAGVREINLISQDTIAYGRDAAGRSEGG----ARATLAQLVERVADVPGVRWVR 237 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y+YP DD++ L+A +++PY+D+PLQHA+ +L+ M+R DR + RE Sbjct: 238 LFYLYPETMTDDLVELLAGHPRVVPYVDMPLQHAADAMLRRMRRGHGGDRLRRVVSTLRE 297 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P+LT R+ FIVG PGET+ +F+ L DF++ A +RVG F+YS E + + L +VP Sbjct: 298 RVPDLTFRTAFIVGHPGETDAEFEELCDFVRWAEFERVGVFRYSDEEASRSYELEGKVPA 357 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAV 410 R+ R M LQ++IS ++ +GRE+ V+++ +E +GR APEIDG V Sbjct: 358 RTAASRYRRLMTLQRRISHKKSAAMIGRELEVLVEGTSDEHEYVLMGRHAGQAPEIDGQV 417 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSR 440 YL+G V+PG++ RV++ A +YDL G Sbjct: 418 YLSG-GEVRPGEMCRVRITQASDYDLVGEL 446 >UniRef50_A7NIS8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Chloroflexi (class) RepID=RIMO_ROSCS Length = 482 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 174/474 (36%), Positives = 250/474 (52%), Gaps = 48/474 (10%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ ++LGCPKN VDSE + L +G+ + S DDAD+VIVNTC FI +A +E+L Sbjct: 1 MMKVHIITLGCPKNQVDSEGMSGILAAQGHTLAASADDADVVIVNTCSFIAAAREETLAV 60 Query: 67 IGEA---LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + + +++ GC+ I P V G + ++ E V + P Sbjct: 61 LRDVAACKTPEQRLVAAGCMAESHRAIVAATPGVDATLGTREWTRIAEVVETFQPAATMA 120 Query: 124 PFLSLVPEQGVKLTP------------------------------RHYAYLKISEGCNHR 153 P + + + LT AYLKIS+GCN R Sbjct: 121 PLNAASAREIIPLTSAGVPSPAPHDLSVPGAYADWRTAPIRRRAVGPSAYLKISDGCNLR 180 Query: 154 CTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE 213 C FC IPS +GD+ S+ IG +L EA+ L AGVKEI++++Q + YG D+ + G Sbjct: 181 CAFCTIPSFKGDMRSKAIGAILGEAQELAAAGVKEIVLVAQHLTDYGRDLGLKDG----- 235 Query: 214 PVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRIL 272 + + +C L + +W RL Y YP+ + +I MA +I YLD+PLQHA P L Sbjct: 236 -LAILLDEICAVLPE-NVWVRLMYAYPHGIGERLIATMARHPQICHYLDMPLQHAHPETL 293 Query: 273 KLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVG 332 + M+RP DR I R P++ +RSTFIVGFPGET +F+ LL FL++ + DRVG Sbjct: 294 RRMRRPPDTDRTRRLIDDLRAAIPDIAIRSTFIVGFPGETNTEFRALLAFLEDVQFDRVG 353 Query: 333 CFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE 392 F+YS G A ALPDQ+ + E RW+ M+LQQ+IS ER + +GR + V+++ + Sbjct: 354 VFRYSREPGTPAAALPDQLAPRIIERRWHEIMRLQQRISRERNRRWLGRVVRVLVEGQGQ 413 Query: 393 EG-----AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++GRS DAPE+DG V G PG + V+V A +YDLWG V Sbjct: 414 TDDGRMLSVGRSFRDAPEVDGQVLFWGAAT--PGTFVDVRVTQALDYDLWGDVV 465 >UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Desulfuromonadales RepID=RIMO_PELPD Length = 450 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 170/456 (37%), Positives = 258/456 (56%), Gaps = 29/456 (6%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 + T + K+ VSLGC KNLVD+E +L L + Y++ +AD++IVNTC FI A QE Sbjct: 2 ESTEKQKVSMVSLGCSKNLVDAEVMLGLLARQEYEITTDEREADIIIVNTCSFIKEAKQE 61 Query: 63 SLEAIGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 S++AI + +IV+GCL + ++++ P+V G Y ++ E + Sbjct: 62 SIDAILDLAERKNDGRCHTLIVSGCLPQRYQEELARELPEVDIFIGTGDYPRIAEILAEK 121 Query: 117 VPKPKHNPFLSLVPEQGVKLTPR------HYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + ++ + PR ++YLKI EGC++RC++CIIP +RG SRP Sbjct: 122 SGTDEQLCYIGDPDFVFDETLPRLNSSPAWFSYLKIGEGCSNRCSYCIIPKLRGPYRSRP 181 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 + +++EA++L GVKE+ +ISQD + YG D++ T++ +L +L ++ Sbjct: 182 LEALVAEAEQLASRGVKELNIISQDITRYGSDMED----------GTTLETLLRRLVQID 231 Query: 231 I--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 W RL Y YP D +I L+ E KI YLDIPLQH S +LKLM+R + + Sbjct: 232 GIQWIRLLYAYPDGISDALIALIRDEPKICKYLDIPLQHISDPVLKLMRRRSNEQQIREL 291 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + + R P L LR++ IVGFPGET EDF L+ F+++AR DR+G F YS EG A + Sbjct: 292 LAKLRREIPTLALRTSLIVGFPGETMEDFTSLMQFVEQARFDRLGVFCYSREEGTPAATM 351 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAP 404 PDQV E VK ER + M++Q ++S +R +E +G VI++ EE + GRS AP Sbjct: 352 PDQVSERVKRERHRKLMRIQARLSFKRNRELIGTTEQVIVEGYSEETELLLKGRSSRQAP 411 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 +IDG VY+ T GDI+ +++ + +YDL G Sbjct: 412 DIDGQVYITAGT-ADVGDIVALRITDSSDYDLIGEI 446 >UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF04_CARHZ Length = 434 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 130/447 (29%), Positives = 211/447 (47%), Gaps = 27/447 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F +LGC N ++E + +GY++V D AD+ ++NTC + ++S + Sbjct: 1 MKKVAFYTLGCKVNQYETEALKGAFLEKGYEIVDFSDYADIYVINTCTVTHLSDRKSRQM 60 Query: 67 IGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKHN 123 I +A+ +N + +V GC + P+V + G +++E V + + K N Sbjct: 61 IRKAVQKNPRAVVAAVGCYAQVAPEEILKIPEVNLVLGTVHKNRLVELVEKVLRERTKIN 120 Query: 124 PFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 S + P + A++KI EGCN C +CIIP RG L SRP+ +V++E Sbjct: 121 AVASFEELLEFEEMPLKLAPGKARAFVKIQEGCNSYCAYCIIPYARGPLRSRPLEDVVAE 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRL 235 K+L +G EI++ T AYG + + + L +L K+ RL Sbjct: 181 VKKLCQSGFSEIVLTGIHTGAYGQEKQD----------LPKLADLVAELFKIPELKRLRL 230 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P +++ ++A K +L +PLQ ILK M+R + L I+ RE Sbjct: 231 SSIEPQDFTVELLDVLANSPKFCRHLHLPLQSGDDDILKAMRRKYTSYEYLRLIETIRER 290 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ L S IVGFPGETEE F + +K+ + FKYSP G A +P Q+PE Sbjct: 291 IPDIALTSDVIVGFPGETEEQFLNTYNLVKKVGFMDIHVFKYSPRAGTPAAKMPGQIPER 350 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 KE R + L++++ + +G+ + VI +E D EG + V +G Sbjct: 351 EKERRSLLLLNLKEELFKNYASKFLGKILEVIPEEQDTEGF----WEGHSDNYLRVKFSG 406 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 N+K G+I VK+ E + G V Sbjct: 407 N-NIKRGEIYPVKITEMKEGYVSGELV 432 >UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Bacillales RepID=C5D4T7_GEOSW Length = 451 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 142/446 (31%), Positives = 220/446 (49%), Gaps = 21/446 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + F +LGC N ++E I + GY+ AD+ ++NTC ++ ++S + Sbjct: 1 MPTVAFHTLGCKVNHYETEAIWQLFKKAGYERKDFDSRADVYVINTCTVTNTGDKKSRQV 60 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I A N + V VTGC P V + G ++LE++ + + + Sbjct: 61 IRRAIRRNPDAVVCVTGCYAQTSPAEVMAIPGVDIVIGTQDRGKILEYIERFQRERQPIN 120 Query: 125 FLSLVPEQGV-------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 +S + + V + T R A LKI EGCN+ CTFCIIP RG + SR EV+ + Sbjct: 121 GVSNIMKTRVFEEMDVPEFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQ 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A++LVDAG KEI++ T YG D+K + + L EQ+ L R+ Sbjct: 181 AQQLVDAGYKEIVLTGIHTGGYGTDLKDYSF-------AALLRDLDEQVVGLK-RLRISS 232 Query: 238 VYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 + D++I ++ KI+ +L IPLQ S +LK M+R +V+ R+++ RE+ P Sbjct: 233 IEASQITDEIIEVLQRSDKIVRHLHIPLQSGSNTVLKRMRRKYTVEFFAERLQRLREVFP 292 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 EL + S IVGFPGETEE+F F++E R + F YS G A +P+QV EEVK Sbjct: 293 ELAITSDVIVGFPGETEEEFMETYHFIREQRFSELHVFPYSKRTGTPAARMPNQVDEEVK 352 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 ER +R + L Q++ E + G+ + VI +E D+E + V Sbjct: 353 NERVHRLIALSDQLAKEYASQFEGQVLEVIPEERDKENPESGLYIGYTDNYLKVKFPATE 412 Query: 417 NVKPGDILRVKVEHA-DEYDLWGSRV 441 + G+I++VK+ A Y+ G V Sbjct: 413 EM-VGEIVKVKITKAGYPYN-EGEFV 436 >UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD6_9DELT Length = 463 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 177/469 (37%), Positives = 252/469 (53%), Gaps = 40/469 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 I SLGCPKNLVDSE +L +L EG V +AD+++VNTCGFI SAV+E ++ Sbjct: 1 MKTIHLTSLGCPKNLVDSELMLGQLVEEGLRPVSEPGEADVLLVNTCGFIQSAVEEGIDT 60 Query: 67 IG----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVH------- 114 I + + +V+V GCL + + E P+V G + + Sbjct: 61 ILGLIEQKKSPAVRVVVCGCLVQRYGSGLVEELPEVDLFLGTEEVSSIAARLRALEEGRA 120 Query: 115 -----------------HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFC 157 Y P FL TP H AYLKI+EGC +RC++C Sbjct: 121 APESGSVPAGAPAADSLRYRPVDDLQRFLPNATLPRRLTTPAHRAYLKITEGCGNRCSYC 180 Query: 158 IIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT 217 +IP++RG L SR ++L EA+ L AGVKE+ +++QD +AYG+D+ G + Sbjct: 181 MIPAIRGPLRSRRPADILHEARALAAAGVKELTLVAQDLTAYGLDLGP-----GGPRLPD 235 Query: 218 SMVSLCEQLSKLGI-WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLM 275 + L +L + W RL Y+YP D+++ L+A +ILPY D+P QH + +LK M Sbjct: 236 LLAQLHRELPAAQVPWIRLLYLYPSRVNDELLELVAANPRILPYFDLPFQHVADPVLKAM 295 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 RP + + R + P +RSTF+VGFPGE EED + L FL++ RL+ VG F Sbjct: 296 NRPYGEALVRELVDRVRRLVPRAVIRSTFMVGFPGEREEDVEALAAFLRDCRLEHVGMFT 355 Query: 336 YSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA 395 Y EG+ A LP QVPEE+KE+R+ R M LQ +IS Q +VG+ V+++ V E Sbjct: 356 YCNEEGSAAATLPGQVPEELKEQRFQRLMALQAEISLAANQARVGQVEEVLVEGVSSETE 415 Query: 396 I---GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + GR+ APEIDG VY+N E N + G+++RV + A YDL G V Sbjct: 416 LLLEGRAWFQAPEIDGCVYIN-EGNCRAGELVRVLISEAHPYDLVGGIV 463 >UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWN1_9PLAN Length = 465 Score = 456 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 182/456 (39%), Positives = 271/456 (59%), Gaps = 30/456 (6%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + FVSLGCPKNLVDSER+L L+ +GYD+V D AD V+VNTCGFI+ A ES + Sbjct: 15 AKGTYSFVSLGCPKNLVDSERMLGLLKLDGYDLVAEPDGADFVVVNTCGFIERARTESFQ 74 Query: 66 AIGEALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 AI E L + VIV+GCL ++ +Q+ E P + + G EQ+ + + Sbjct: 75 AIDEMLELKKQGRTKGVIVSGCLAERQKEQLLEDRPGIDCLVGVFGREQITQVADRLLGS 134 Query: 120 PKHN-------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + P +L +++TPRH+AYLKISEGC+ CTFC IP MRG ++P+ Sbjct: 135 LEEQRSVFQPAPIRALSDTDRLRITPRHFAYLKISEGCDRLCTFCAIPKMRGKHATKPME 194 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 EVL EA++L GVKE+++++QDT+ YG+D+ + L ++ K+ Sbjct: 195 EVLKEARQLAADGVKELVIVAQDTTYYGIDLYGEP----------RLAELLREIEKVEGI 244 Query: 232 -WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RL Y YP D++I ++A+ KI+PY+D+PLQH + +L+ M R + +IK Sbjct: 245 QWIRLMYFYPMYITDELIDVIAKSEKIVPYIDMPLQHINDTMLRRMSRRVTRAETELQIK 304 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + RE P LTLR+TFI GFPGET+E ++ L +FL+E + +R+G F YS A LPD Sbjct: 305 KLREAIPNLTLRTTFITGFPGETQEQYEELREFLREQKFERMGVFTYSFEPDTPAANLPD 364 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEI 406 + EEVK ER M +QQ+++ + ++ + + VI+D E ++ IGRSMADAP++ Sbjct: 365 HLSEEVKNERREALMAVQQELAFAWNEAQIDKVMPVILDQSVEGEKNVWIGRSMADAPDV 424 Query: 407 DGAVYLNGET-NVKPGDILRVKVEHADEYDLWGSRV 441 DG V++ G + GDI+ V++ + +YDL G V Sbjct: 425 DGLVFVTGHKYRLHAGDIVDVQIVTSQQYDLVGIAV 460 >UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicutes RepID=B7GKD2_ANOFW Length = 467 Score = 456 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 140/452 (30%), Positives = 219/452 (48%), Gaps = 21/452 (4%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 +S+V P + F +LGC N ++E I + GY+ AD+ ++NTC ++ Sbjct: 12 LSEVIYMPTVAFHTLGCKVNHYETEAIWQLFKQAGYERKDFESHADVYVINTCTVTNTGD 71 Query: 61 QESLEAIGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 ++S + I A N + V VTGC P V + G ++LE++ + Sbjct: 72 KKSRQVIRRAVRRNPDAVVCVTGCYAQTSPAEVMAIPGVDIVIGTQDRGKILEYIEQFKQ 131 Query: 119 KPKHNPFLSLVPEQGV-------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + + + + V T R A LKI EGCN+ CTFCIIP RG + SR Sbjct: 132 QRQPINGVRNIMKTRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP 191 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 EV+ +A++LVDAG KEI++ T YG D+K + + EQ+ L Sbjct: 192 KEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKD-------YNFAMLLRDMDEQVKGLK- 243 Query: 232 WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ + D+VI ++ KI+ +L IPLQ S +LK M+R + + R+ + Sbjct: 244 RLRISSIEASQITDEVIDVLRQSDKIVRHLHIPLQSGSNAVLKRMRRKYTTEFFAERLAR 303 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE+ P+L + S IVGFPGETEE+F +F++E R + F YS G A +PDQ Sbjct: 304 LREVFPDLAVTSDVIVGFPGETEEEFMETYEFIREQRFSELHVFPYSKRTGTPAARMPDQ 363 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV 410 V EEVK ER +R + L Q++ E + G+ + VI +E+ +E + V Sbjct: 364 VDEEVKNERVHRLITLSDQLAKEYASKFEGQVLEVIPEELYKEDPASGLYVGYTDNYLKV 423 Query: 411 YLNGETNVKPGDILRVKVEHA-DEYDLWGSRV 441 + G +++VK+ A Y+ G V Sbjct: 424 KFPATEEM-VGQLVKVKITKAGYPYN-EGEFV 453 >UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=Leptospirillum RepID=A3EV78_9BACT Length = 468 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 134/449 (29%), Positives = 219/449 (48%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL--- 64 + GC N+ DSER+ L EG + V AD+++VNTC D A Q++L Sbjct: 28 KTFYIKTFGCQMNVHDSERMAGLLTAEGGNPVSEPAAADIILVNTCTIRDKADQKALSDL 87 Query: 65 EAIGEALNENG--KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY-VPKP 120 I + E + VTGC+ +E ++I + P V I GP ++ + + Sbjct: 88 GRIRQVRKEGPGTILAVTGCMAQREGEEIFRLVPDVDLILGPSQIRNLIPLLDAASTSRA 147 Query: 121 KHNPFLSLVPEQGVKLTPRH---YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + L VPE R A++ + EGC+ C +C++P+ RG SRP+ +++ E Sbjct: 148 RVDGTLWPVPEMTTPPAIRPPGVTAFVTVQEGCDKACAYCVVPATRGAERSRPVTDIVRE 207 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + LV +G +EI ++ Q+ + YG G+ S L ++LS + RL + Sbjct: 208 VENLVSSGFREITLLGQNVNGYG---------QKGDTAGASFPELLQRLSDIPGLLRLRF 258 Query: 238 V--YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P +D+I +MA +++P+L +P+Q S R+L+ M+R S+D I++ R+ Sbjct: 259 TTSHPMDMSEDLIDVMATSSRVMPHLHLPVQSGSDRMLERMQRGYSLDDYRRWIEKLRKK 318 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 PE L + IVGF GETEEDF+ L ++E R D F YSP A++ D P E Sbjct: 319 VPEAALTTDLIVGFCGETEEDFEKTLAAVEEFRFDGAFAFIYSPRPSTPAHSWEDVPPRE 378 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYL 412 + ER R + +Q + ER Q VG + ++ ++ D E A+GR+ A+ Sbjct: 379 MSVERLERLQKKVEQQAMERNQSLVGSRVEILTEKWDPETRTAVGRTPQFQTV--RALVA 436 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 + PGD+L V + L G+ V Sbjct: 437 PERPDPSPGDLLWVTITQGARAGLKGNAV 465 >UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RIMO_ACIBL Length = 504 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 185/498 (37%), Positives = 265/498 (53%), Gaps = 72/498 (14%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T K+GFVSLGCPKNLVDSE ++ L T G ++ +DAD+++VNTC FID+A QES+ Sbjct: 16 TKPKKVGFVSLGCPKNLVDSEVMMGLLATNGAEITARAEDADIIVVNTCSFIDTAKQESV 75 Query: 65 EAIGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I E K+IV GCL + ++I++ P+V + G E +L Sbjct: 76 DTILEMAGHKATGRAQKLIVAGCLVERYRNEIQKNIPEVDAVVGTGELEAILAASGIEPR 135 Query: 119 KPKHNP-----------------------------------------------FLSLVPE 131 K + N +L Sbjct: 136 KSEANSPFVILNSTSASQQLKSGIADRPEGAAREEAGRFARTDWDGAVADLPNYLYDENT 195 Query: 132 QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILV 191 V TP++ AY+K++EGC+H C+FCIIP +RG SR V++EA+RL GVKEI + Sbjct: 196 PRVLATPKYMAYIKVAEGCDHPCSFCIIPQLRGKFRSRRFESVVAEAERLAKQGVKEITL 255 Query: 192 ISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIP 249 I QDT+ YG D+ +K + L E+L+++ W R Y YP ++ Sbjct: 256 IGQDTTCYGEDLG----------LKDGLAQLLERLAQIEELQWVRFLYAYPNKITKRLLQ 305 Query: 250 LMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGF 308 +A+ KI Y+D+PLQH++ +LK MKR D L I++ R + P+LTLR++FIVGF Sbjct: 306 TIADNPKIPKYMDVPLQHSAANVLKRMKRGAHGDIFLKSIEEMRRVIPDLTLRTSFIVGF 365 Query: 309 PGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQ 368 PGETEEDF L +F+K A++D +G F YS EGA A AL ++VP E R + M LQ+ Sbjct: 366 PGETEEDFNQLCEFVKAAQIDWLGVFSYSDEEGAKAFALDEKVPPREIERRRKKLMSLQK 425 Query: 369 QISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNG---ETNVKPGD 422 QIS ++ + +GRE VI++ EE GR+ APEIDG VY+N NV+PG Sbjct: 426 QISKKKRKALIGREFDVILEGPSEETDLLWEGRTAMHAPEIDGKVYINDFAEHENVEPGQ 485 Query: 423 ILRVKVEHADEYDLWGSR 440 + R ++ A +YDL Sbjct: 486 VFRCEITEAHDYDLVARL 503 >UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO n=65 Tax=Bacteria RepID=RIMO_CLOB8 Length = 465 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 170/455 (37%), Positives = 270/455 (59%), Gaps = 26/455 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + + K+G VSLGC KN VDSE IL ++ E Y++ + +AD++IVNTCGFI+SA Q Sbjct: 17 EEASSKYKVGMVSLGCDKNRVDSEIILGKMSDE-YEITNNPKNADIIIVNTCGFIESAKQ 75 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ I E N +I TGCL + ++++ + P++ + G + Y ++ E + Sbjct: 76 ESIDTILEMANYKINYKCKLLIATGCLTQRYGEELKTLIPEIDIMLGVNDYNKINEIITE 135 Query: 116 YVPKPKHNPFL------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 ++ K L ++ + + T R AY++I+EGCN+ CT+CIIP +RG SR Sbjct: 136 FIDGNKLATELLNYSDENINEGKRIITTQRESAYIRIAEGCNNFCTYCIIPKIRGKFRSR 195 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 + +++EA+ L ++GVKEI++I+QDT+ YG D+ K ++ L ++LSK+ Sbjct: 196 KMENIINEARDLSESGVKEIILIAQDTTLYGSDIYG----------KKNLHVLLKELSKI 245 Query: 230 GI--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W R+ Y YP D++I +A K++ YLDIP+QH S +ILKLM R S + Sbjct: 246 EGIEWIRVLYCYPEEIYDELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSKKDIIN 305 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 +I+ RE PE+ +R+TFIVGFP ET+EDF ++DFLKE +L++VG F YS E A Sbjct: 306 KIQILRERVPEIVIRTTFIVGFPNETDEDFNEIIDFLKEYKLEKVGAFTYSQEEDTPAAK 365 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 + Q+ EE+KE+R M LQ+ IS E + K+G+ ++++ + + GRS AP+I Sbjct: 366 MDGQIDEEIKEKREEDLMLLQKNISEEINKLKIGKLYDILVEGYNGKCYYGRSYEMAPDI 425 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 D V ++ G+ ++VK+ +YDL G V Sbjct: 426 DANVLFESNAKIENGEFVKVKIVETMDYDLVGVVV 460 >UniRef50_A6NW35 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW35_9BACE Length = 449 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 171/448 (38%), Positives = 257/448 (57%), Gaps = 24/448 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 Q KI FVSLGC KNLV++E+++ R G+ VV + + AD+ ++NTCGFIDSA E+++ Sbjct: 9 QYKIAFVSLGCAKNLVNTEQMMALCRDAGHQVVANPEGADVAVLNTCGFIDSAKSEAIDN 68 Query: 67 IGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I E GK++VTGCL + D++ E P+V + G SY ++ V + Sbjct: 69 ILELAELKSKGTLGKLLVTGCLSQRYKDELMEEMPEVDGVLGTGSYTDIVPAVESVMEGD 128 Query: 121 KHNPFLSL----VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + F + + TP + AYLKI+EGC++RC++CIIP +RG SR + +L+ Sbjct: 129 QPTFFGDIDHTVEDGARMVSTPAYTAYLKIAEGCDNRCSYCIIPYLRGRYRSRTMESLLA 188 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRL 235 EAK L D GVKEI+VI+QD + YG D+ K + L ++L KL W RL Sbjct: 189 EAKELADRGVKEIIVIAQDITRYGTDLYK----------KRMLGELLKELCKLPFHWVRL 238 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY+YP DD+I ++A E KIL Y+DIPLQH + ++L+ M R G+ LA + + R Sbjct: 239 HYLYPDELDDDLIDVIASEPKILKYIDIPLQHINDKLLRSMNRRGTKAEILALLDKLRAR 298 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P L LR++ I G PGE EE+F+ L DFL+EA ++R G F++SP EG A +PDQV + Sbjct: 299 IPGLVLRTSLIAGLPGEGEEEFEELCDFLREAHIERAGIFQFSPEEGTPAAVMPDQVDPD 358 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVYL 412 R + LQ ++ + ++G + V+ + D + GRS AD+P++DG V+ Sbjct: 359 TAARRVELLVDLQSRVMDAFNESRLGETLEVLCEGFDPDMGCYAGRSYADSPDVDGKVFF 418 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSR 440 V G + V++ ++ DL G Sbjct: 419 TAAGLVPAGTFVNVRITGTEDGDLMGEI 446 >UniRef50_Q2LQ68 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophus aciditrophicus SB RepID=RIMO_SYNAS Length = 453 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 161/454 (35%), Positives = 243/454 (53%), Gaps = 32/454 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + VSLGCPKNL+DSE + L G +V ++AD++++NTC FI A +ES++ I Sbjct: 6 VHIVSLGCPKNLIDSEVMAALLEQAGCRIVSGPEEADILLLNTCAFILPAREESIDEIFR 65 Query: 70 ALNENG-----KVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 +IVTGCL + ++ P+V G + +H+ + Sbjct: 66 LAEWKKAGKCRHLIVTGCLPQRYGAELAAELPEVDLFLGISEVPNIADHLRVLMEGKHSE 125 Query: 124 P---------FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 FL + TP + AYLKI+EGC++RC++CIIP +RG SRPI ++ Sbjct: 126 KNRVIVTNPLFLMDAGHPRLLSTPPYSAYLKIAEGCSNRCSYCIIPRLRGKARSRPIEDI 185 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IW 232 L EA+ LVD GV+E+++++QDT+AYG D++ K ++ L +L+ L W Sbjct: 186 LREAEDLVDRGVRELILVAQDTTAYGRDLEG----------KPTLALLLRELAGLNTLAW 235 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ Y YP D+++ ++A +I YLD+P+QH IL MKR G +++ Sbjct: 236 IRILYTYPTGLTDELLNVIANQDRICSYLDVPIQHIDDDILAAMKRRGDSHLIRNSLERA 295 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R + P+L LR++ I GFPGET F L+ F++E R D +G F YSP EG A LP QV Sbjct: 296 RAVIPDLALRTSLITGFPGETPAKFHRLIAFVQETRFDHLGVFPYSPEEGTPAEKLPRQV 355 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD---EEGAIGRSMADAPEIDG 408 + KE R N M+ Q IS E Q VG V+I+ + IGR AP+IDG Sbjct: 356 SQRTKETRRNLLMEEQAVISHEINQTLVGSLQEVLIEGPSSSPDYPMIGRCRRQAPDIDG 415 Query: 409 AVYLN-GETNVKPGDILRVKVEHADEYDLWGSRV 441 Y+ G+ PG +++ ++ AD+YDL+ + Sbjct: 416 LTYVKGGKQPFLPGSLVQCRIVAADDYDLFAEVI 449 >UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RIMO_MOOTA Length = 432 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 176/443 (39%), Positives = 264/443 (59%), Gaps = 26/443 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 ++ ++LGCPKN V+SE +L L +VV A++VI+NTC FI +A +E+L+ I Sbjct: 3 RVAVITLGCPKNQVESEYMLGILEKNHLEVVSDPRQAEVVIINTCSFITAAREEALDTIL 62 Query: 69 EALN--ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH--- 122 E + ++IV GCL + ++ + P+ GP + ++ E ++ + + Sbjct: 63 ELARAANHPRLIVAGCLAQQYASELWQELPEAAAFIGPGATGRLPEIINRVLKGERVLDV 122 Query: 123 -NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 P + + + +AYLKI+EGCN+RCT+C IPS++G SRP+ +V++EA L Sbjct: 123 PGPEMITGELPRLIEDGKPFAYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVAEAVSL 182 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVY 239 G+KE+++++QDT+AYG+D + + L +L+++ W RL Y Y Sbjct: 183 AARGIKELVLVAQDTTAYGLDCYG----------EYRLPELLRRLARIEGIEWVRLLYAY 232 Query: 240 PYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P ++I +MA E ++PYLD+PLQHAS +L+ M RPG+ L I+ R PE+ Sbjct: 233 PTRITPELIEVMATEPGVVPYLDLPLQHASEGVLRRMGRPGTGAAGLRAIESLRRAIPEI 292 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 T+RSTFIVGFPGE EEDFQ+LLDFL +ARLD VG FK+SP EG A +LP QVPEEVKEE Sbjct: 293 TIRSTFIVGFPGEEEEDFQILLDFLTDARLDWVGAFKFSPEEGTIAASLPGQVPEEVKEE 352 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R+ R M QQ I+ + +GRE+ V+ + + +GRSM APE+DG VY+ G+ + Sbjct: 353 RYQRLMLHQQSITRACNEGWLGREVQVLKEGPE----VGRSMRQAPEVDGVVYVKGDPS- 407 Query: 419 KPGDILRVKVEHADE-YDLWGSR 440 G ++ VK+ YD G Sbjct: 408 PAGSMVTVKLTQLYNIYDFLGEI 430 >UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT Length = 480 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 172/483 (35%), Positives = 264/483 (54%), Gaps = 48/483 (9%) Query: 1 MSKVTPQPK-IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 MS T PK +G +SLGC KNLVD+E +L + ++G + + D+AD++IVNTC FIDSA Sbjct: 1 MSTKTATPKKVGMISLGCAKNLVDAEIMLGGVLSKGMQITSNADEADVLIVNTCAFIDSA 60 Query: 60 VQESLEAIGEA-------LNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLE 111 +ES+EAI EA ++IV+GC+ + ++ P+V G Sbjct: 61 KEESIEAILEAHESRGLKKRAGQRLIVSGCMAQRFAKELTHEMPEVDAFIGLDQVADAAG 120 Query: 112 HVHHYVPK---------------------------PKHNPFLSLVPEQGVKLTPRHYAYL 144 + + + ++ +LTP H A+ Sbjct: 121 IIEQVFSRPAAPVPAAKAKAPDVLLDEQWEPLNLVTRKPVYIPDYDTPRFRLTPAHTAFT 180 Query: 145 KISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVK 204 KI+EGCNH C+FC+IP MRG SR I V++E + LV GVKEI +ISQDT+ +G+D+ Sbjct: 181 KIAEGCNHPCSFCVIPQMRGKHRSRTIESVVAEVRSLVAEGVKEINLISQDTTYFGMDLW 240 Query: 205 HRTGFHNGEPVKTS---MVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILP 258 + + ++ L +L K+ W RL Y +P D++I +AE K+ Sbjct: 241 EEKAGPRQQVDSSRGPTLIKLLRELDKIEGDFWIRLLYTHPAHWSDELIACIAECKKVCR 300 Query: 259 YLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQM 318 Y+D+PLQH PR+L+LM+R S + I + R P + +R+TFIVGFPGET+E+F Sbjct: 301 YIDMPLQHIHPRMLELMRRETSSEHIENLIARIRAGIPGIAIRTTFIVGFPGETDEEFNY 360 Query: 319 LLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEK 378 LLDF++ R +R+G F YS EG+ A + DQVP++VK R+ R M+LQQ+I+ E + + Sbjct: 361 LLDFIERTRFERLGVFTYSQEEGSRAAKMDDQVPQKVKAARYKRAMKLQQKIAREISETQ 420 Query: 379 VGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 VG+ + ++D+ + R+ ADAP+IDG + L+ V G+ + V++ YDL G Sbjct: 421 VGQRVRAVVDQP----LVARAAADAPDIDGRILLSSPAPV--GEFIDVEITGTQVYDLVG 474 Query: 439 SRV 441 + Sbjct: 475 DPI 477 >UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP61_9FIRM Length = 446 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 178/446 (39%), Positives = 249/446 (55%), Gaps = 27/446 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 I +SLGCPKN VD++ L EG+ V +AD++IVNTCGFI+SA E++E I Sbjct: 3 IAIISLGCPKNQVDADVFCHALLKEGHTTVADPAEADVIIVNTCGFIESAKAEAIENILM 62 Query: 69 ----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + N + KVIVTGCL + Q I + P+V + G S + V Sbjct: 63 ACQYKQQNPDLKVIVTGCLAERYKQQIVQEIPEVDAVIGIGSNAAIPAIVARVCAAGAGQ 122 Query: 124 PFL----SLVPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 S +P G ++ TPRHYAYLKI+EGCN+RC +C IP +RG L SRPI + ++E Sbjct: 123 VESYGPKSDMPLGGARVISTPRHYAYLKIAEGCNNRCHYCAIPLIRGPLRSRPIEDCVAE 182 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A+ L GV+E+++++QD +AYG D ++ L ++L ++ W R+ Sbjct: 183 ARWLAGEGVRELILVAQDPTAYGEDWGK----------PGAVCELLDRLQQIDGIRWIRI 232 Query: 236 HYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP D I M K++PYLD+P+QH +LK M R G I + R Sbjct: 233 LYAYPERISDAFIAAMVRNTKVVPYLDLPIQHCDDAVLKAMNRRGGRADIEDAIARLRAA 292 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P +TLR+T I GFPGETEE + L DF+K R DR+GCF YS E A + Q+ EE Sbjct: 293 IPGITLRTTLIAGFPGETEEQYAELCDFVKTMRFDRLGCFAYSAEENTVAAKMDGQLDEE 352 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYL 412 K+ R + M+LQ ++SA+R +EKVG+ + I D VD+E + RS AD PEIDG V Sbjct: 353 TKQRRADHIMELQAEVSADREKEKVGQTLECICDGVDDETGMYLLRSKADCPEIDGNVLT 412 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 +T ++ G V + AD YDL+G Sbjct: 413 PADTLLETGAFYNVTITDADTYDLYG 438 >UniRef50_A0L887 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Magnetococcus sp. MC-1 RepID=RIMO_MAGSM Length = 487 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 169/452 (37%), Positives = 256/452 (56%), Gaps = 25/452 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + +G +SLGC KN VDSE++L EGY +V +AD+++VNTCGFI A +ES Sbjct: 33 ANAKGTVGVISLGCSKNTVDSEQMLGRFVREGYLLVADPLEADLLVVNTCGFIADAERES 92 Query: 64 LEAIGEALN-----ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYV 117 E+I E + + K+IVTGCL + ++ E HP++ + G Y+ ++ + Sbjct: 93 RESIDEMAHIKQLYPHKKLIVTGCLSQRYGAKLLEDHPQIDLLLGAGHYDTLIPLLEAKA 152 Query: 118 PKP----KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 P+ + + T AY+KI+EGCN+ CTFCIIP +RG SR + + Sbjct: 153 PQTVDHVTEPDAAASHDVPRLITTGESSAYVKIAEGCNNSCTFCIIPKLRGPFRSRTLDD 212 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GI 231 + +E L D G E++++SQDT+ YG D+ P ++S+ L +++ Sbjct: 213 IAAEVALLTDEGCHELILVSQDTTWYGRDL----------PQRSSLTELLQRILASCEAP 262 Query: 232 WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W R+ Y+YP +++ L+A E ++LPY DIPLQHA ++LK M+R ++ +K Sbjct: 263 WIRMLYLYPTLVKKELLQLIAREDRLLPYFDIPLQHADSQVLKRMQRSERLETVRQLVKD 322 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R P+ LRSTFIVGFPGE+E +FQ LLDF++E++LD VG F YS +G A LPD+ Sbjct: 323 VRASVPDAILRSTFIVGFPGESEAEFQTLLDFIQESQLDWVGVFTYSDEQGTAAYDLPDK 382 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDG 408 V V E R ++ M LQQ I++ RLQ VG + V+++ DEE +GR A APE+DG Sbjct: 383 VDARVAEARRDQLMALQQPITSARLQRWVGEIVAVLVESYDEEHACFVGRFWAQAPEVDG 442 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + ++ G + V + YDL+G Sbjct: 443 QVLIQCNEELEMGIFVPVAITQVLGYDLYGDL 474 >UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Dictyoglomus RepID=RIMO_DICT6 Length = 440 Score = 452 bits (1164), Expect = e-126, Method: Composition-based stats. Identities = 159/450 (35%), Positives = 244/450 (54%), Gaps = 25/450 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K G + LGC KN VD+E ++ L+ GY P +AD+V+VNTC FI A QE+ E Sbjct: 1 MKKAGIIHLGCSKNQVDTEILMGFLKELGYTFTPYLGEADLVLVNTCAFIKPAWQEAEEN 60 Query: 67 IGEAL-----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I N+N K++VTGC + E ++ + +P V GP Y++ + + + Sbjct: 61 INFLKEYKENNKNLKIVVTGCYVERFEKELEDRYPFVDLFIGPGEYDKFVSLITSNGERK 120 Query: 121 KHNP----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 H+ F+ V ++P + Y+KISEGCN+ C++C IP +RG L SR I +++ Sbjct: 121 IHSSPASSFMYTHKMPRVLISPNFWVYVKISEGCNNFCSYCTIPFIRGRLRSRSIDDIIK 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTR 234 E + LV GVKEI +I+QDT+ YG D+ K+++V L + + + + R Sbjct: 181 EVEILVQKGVKEINLIAQDTTRYGEDLYG----------KSALVDLLKSIENIKGDFYVR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP D+I + K++PY DIP+QH + ILK M R D + RE Sbjct: 231 ILYSYPSRVTKDLINFIKVSEKVVPYFDIPIQHVNDEILKKMNRSYKKDDIIRVWSTIRE 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + +R+T +VGFPGETEE+F+ L+ F+K DR+G F Y EG + Q+ E Sbjct: 291 NFEDAVIRTTVMVGFPGETEENFEELIAFIKAYPFDRLGAFTYYNEEGTISKNFDGQIDE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 + K R++ M Q++IS + + +GRE VII+ + IGRS +APE+DG + + Sbjct: 351 DEKIRRYDILMSTQKEISKKLNAKLLGREFDVIIENEKGKYFIGRSWREAPEVDGVIMIP 410 Query: 414 --GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ GD +RVK++ YDL G V Sbjct: 411 KEGSRSISIGDRVRVKIKKYRAYDLLGELV 440 >UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO n=56 Tax=cellular organisms RepID=RIMO_SYNR3 Length = 487 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 168/449 (37%), Positives = 250/449 (55%), Gaps = 24/449 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 +P + F LGC KN VD+E +L L GY V DA +V+VNTC FI A ES+ Sbjct: 37 RPTVAFAHLGCEKNRVDTEHMLGLLAQAGYGVSADEADAQVVVVNTCSFIQDARAESVRT 96 Query: 67 IGEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN-- 123 + + + ++++ GCL ++++ E P+ I G Y+ ++E + + N Sbjct: 97 LVDLAEQGKQIVIAGCLAQHFQEELLESLPEARAIVGTGDYQHIVEVLEQVEAGERVNRV 156 Query: 124 ----PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F++ + T AYLK++EGC++RC FCIIP +RGD SRPI +++EA+ Sbjct: 157 SQVPTFVADENLPRYRTTSEAVAYLKVAEGCDYRCAFCIIPKLRGDQRSRPIESIVAEAQ 216 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYV 238 +L GVKE+++ISQ T+ YG+D+ K + L L ++ I W R+HY Sbjct: 217 QLAAQGVKELILISQITTNYGLDLYG----------KPQLAELLRALGEVEIPWIRVHYA 266 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP +V+ E +LPYLD+PLQH+ P +L+ M RP +++ RE P+ Sbjct: 267 YPTGLTPEVLAAYREVPNVLPYLDLPLQHSHPEVLRAMNRPWQEGVNGQLLQRIREQLPD 326 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 LR+TFIVG+PGETEE F+ LL+F++E R D VG F +SP +G A LP+ VP EV E Sbjct: 327 AVLRTTFIVGYPGETEEQFEHLLEFVQEQRFDHVGVFCFSPEDGTPAADLPNAVPAEVAE 386 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLN-- 413 R R M+ QQ ISAER VGR + V++++ + IGR + AP++DG V + Sbjct: 387 ARRGRLMEAQQAISAERNGAWVGRIVDVLVEQENPSSGELIGRCLRFAPDVDGEVRIRAG 446 Query: 414 -GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ V++ AD YDL G V Sbjct: 447 SHGAAASAGTMVPVRITAADIYDLEGEVV 475 >UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Ruminococcaceae RepID=C7H912_9FIRM Length = 441 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 180/449 (40%), Positives = 258/449 (57%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI +SLGCPKN VD + ++ L + G++ V +AD+++VNTCGFI+SA E++E I Sbjct: 1 MKIACISLGCPKNQVDLDVMVHILLSAGHETVADLGEADVILVNTCGFIESAKTEAIENI 60 Query: 68 GEA-----LNENGKVIVTGCLGAKED-QIREVHPKVLEITG---PHSYEQVLEHVHHYVP 118 EA N KVIVTGCL + QI E P+V + G + + ++ + H Sbjct: 61 LEACAYKQQNPELKVIVTGCLAERYRSQIEEEIPEVDAVVGCASNKAIDTIVARLFHGEN 120 Query: 119 KPKHNPFLSLVPEQGVKL--TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + P G ++ TP HYAYLKI+EGCN+RC +C IP +RG L SR + + ++ Sbjct: 121 HLESYGAKKDFPLGGKRVIGTPAHYAYLKIAEGCNNRCHYCAIPGIRGPLHSRDLADCVA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 EA+ L GVKE++V++QD +AYG D S+ L ++L+K+ W R Sbjct: 181 EARWLAGEGVKELIVVAQDPTAYGEDWGK----------PGSICELLDKLNKVPGLEWIR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP DD I M K++PYLD+P+QH + ILK M R + L I + R Sbjct: 231 IMYAYPERITDDFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRRSTRAELLEVIGKLRR 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P +TLR+T I GFPGETEE F+ L +F+KE R DR+GCF YS E A + Q+ + Sbjct: 291 EIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVRFDRLGCFAYSAEENTVAAKMDGQIDQ 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVY 411 E K+ R MQ+Q I A++ EKVG+ + V+ D +DEE + R+ DAPE+DG V Sbjct: 351 ETKDRRAELVMQIQTGIMAQKQAEKVGQTVRVLCDGIDEESGLYLCRTTGDAPEVDGNVC 410 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSR 440 ++ E + PG V VE +D YDL+G+ Sbjct: 411 VSSEEPLYPGQFYDVLVEDSDLYDLYGTV 439 >UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=MIAB_COPPD Length = 426 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 121/440 (27%), Positives = 202/440 (45%), Gaps = 23/440 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N DSE + L++ G++ + D+D+V++NTC A + ++ I Sbjct: 1 MKYYIFTYGCQMNKNDSEMVSGILKSSGWEEAKNVVDSDLVVINTCSVRLHAEERAIGTI 60 Query: 68 GEALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 KV+V GC+ + ++I P V + GP +L+ ++ + + Sbjct: 61 SALKKLGKKVVVMGCMSEVRGNEIMSRFPHVQAVLGPSYEAHILDVLNGERRILVGDEKV 120 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 +H Y+ I +GC+ CT+CI+P RG + SR +L E + VD G Sbjct: 121 DFEKYSSANRKEKHSVYVSIMKGCDDFCTYCIVPFTRGRVQSRDPESILEEVRVCVDNGA 180 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV-- 244 EI ++ Q+ + YG D+ VSL E+++ + R+ ++ P+P Sbjct: 181 VEITLLGQNVNDYGKDLSG-----------WDFVSLVERVATIDGVRRIRFMSPHPANFK 229 Query: 245 -DDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRST 303 DD+ L ++ PY +PLQ IL+ M R + + RE P + + + Sbjct: 230 KDDITRLANLPQVAPYYHLPLQSGDDEILRRMNRKYTTGEFAELVGFIRESVPNVAIGTD 289 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP-DQVPEEVKEERWNR 362 IVGFPGE++E FQ FL++ + D V YSP G A VP EV + R++ Sbjct: 290 LIVGFPGESDEHFQNTFKFLEKMQFDVVYMAIYSPRPGTAAARQETSFVPAEVAKARYDE 349 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLNGETNVKP 420 ++LQ++IS Q VG V+ID D+ IGR+ + V +V P Sbjct: 350 LLRLQEKISYSINQRYVGTLQEVLIDREDKTTGKFIGRTPTNKT-----VVFTSIRHVSP 404 Query: 421 GDILRVKVEHADEYDLWGSR 440 G+ + V++ A + L+G Sbjct: 405 GEFVDVRINEAKSWVLYGEA 424 >UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA07_9FIRM Length = 448 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 169/454 (37%), Positives = 255/454 (56%), Gaps = 29/454 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 K+ ++LGCPKN VDSE I+ L +GY++V +D +I+NTC FI A++ES+ Sbjct: 3 NNMKKVFVLTLGCPKNTVDSENIMYLLSKQGYEIVDDATVSDYIIINTCTFIHDAMEESI 62 Query: 65 EAIGEAL-----NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 +I EA K+IVTGCL + ++E P+V G + + + + Sbjct: 63 NSILEATLVKKDRSEVKIIVTGCLAQRYSKDLKEEIPEVDAFVGTGEFYNMDKIIKSMET 122 Query: 119 KPKHNPFL-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + + TP H+AYLK+SEGC+ CT+C+IPS+RG SR I Sbjct: 123 EESDEVIVKVDNIDCPIFETDRTLTTPSHFAYLKVSEGCDKHCTYCVIPSIRGKQRSRKI 182 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +++SEAKRL D GVKE+++I+QD YG D+ + + L E+L+K+ Sbjct: 183 EDIVSEAKRLADRGVKELILIAQDVGEYGTDLYG----------ERKLPELLEELNKIES 232 Query: 232 --WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W R+ Y+YP D++I K+L Y+D+PLQH + ILK M R S + L I Sbjct: 233 IHWIRVLYIYPETVSDELIDKFVNLDKVLKYIDMPLQHINDNILKKMGRKTSKEDILTLI 292 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ R + +RSTFI FPGETEE+ + LL+F+K +LDRVG FKYS EG A + Sbjct: 293 RKLRSKVNGIKIRSTFITAFPGETEENHKELLEFIKLYQLDRVGFFKYSREEGTPAYDMD 352 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPE 405 +QV EE+K+ER+ M Q+ +S E ++ + + + V+I+E E+ IGRS D PE Sbjct: 353 NQVSEEIKDERYMELMSAQEDVSEELMESYLDKTLEVLIEEKVEDEDNVYIGRSYMDCPE 412 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 IDG VY+ + ++ G+ + +E + EYDL G Sbjct: 413 IDGEVYVYADKPLEIGNFYDIVIEDSMEYDLIGR 446 >UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Verrucomicrobia RepID=RIMO_OPITP Length = 471 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 169/458 (36%), Positives = 250/458 (54%), Gaps = 34/458 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ +SLGC KNLVDSE ++ L G V+P + AD+VIVNTC FIDS+ +ES+ I Sbjct: 3 KVSLISLGCAKNLVDSEIMVGHLHQAGMAVIPEAEKADVVIVNTCSFIDSSKEESIGHIL 62 Query: 69 --------EALNENGKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + K+IV GC+ + +D +H +V G +V + Sbjct: 63 EVHQHRGLRKRRKEQKLIVAGCMSQRFSKDLSSSLHDEVDAFIGLDQVTKVAPIIQEIYA 122 Query: 119 KPK------------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + + + F+ +LTP+H+AY+KI+EGCNH CTFCIIP +RG Sbjct: 123 RERTKTDDPVSFVEGRSTFIPDYDTPRFRLTPKHFAYVKIAEGCNHPCTFCIIPQIRGRH 182 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPV---KTSMVSLC 223 SR + V++E ++LV GVKEI +ISQDT+ +G+D + T++ +L Sbjct: 183 RSRTVESVVAEVRQLVREGVKEINLISQDTTFFGMDTWEQRPNPRTPVDSGRGTALTTLL 242 Query: 224 EQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGS 280 QL+ + W RL Y +P D++I +AE K+ Y+DIPLQH S +L M+R S Sbjct: 243 RQLNAIEGDFWIRLLYTHPAHWSDELIRTIAECPKVARYIDIPLQHISDAMLSRMQRETS 302 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 I + R P + +R+TFIVGFPGET+ D L F+ E + +R+G F+YS + Sbjct: 303 GGYIRDLIARIRAGIPGIAVRTTFIVGFPGETDADVDELCAFISETKFERLGVFRYSQED 362 Query: 341 GADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSM 400 G A +P+Q+ + KE RW+R M LQ+QI+A+ + VGR + V++ EE + R Sbjct: 363 GTRAAKMPEQLSAKTKEARWHRTMALQKQIAADVSKTYVGRTLRVLV----EEPGVARGE 418 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 ADAP+IDG VY+ E + G+ V V +YDL Sbjct: 419 ADAPDIDGRVYVPRE--LPVGEFADVTVTGYHDYDLLA 454 >UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Deltaproteobacteria RepID=RIMO_DESPS Length = 443 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 168/450 (37%), Positives = 259/450 (57%), Gaps = 26/450 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K +SLGC KNLVDSE +L LR G+++ DAD+++VNTCGFI AV+E++E I Sbjct: 1 MKFHLISLGCAKNLVDSEVVLGCLRDAGWEMT-DEQDADLLLVNTCGFIQPAVEEAVEEI 59 Query: 68 GEALN-----ENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 ++ K++V GCL + +Q+ E P+V G + E+V + + Sbjct: 60 LALVDIKADFPEKKIVVLGCLVQRYKEQLLESLPEVDLFVGTEGVANIAEYVGKLIAGEE 119 Query: 122 HN------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + FL + TP A++KI+EGC++RC++C+IPS+RG L SR + +VL Sbjct: 120 QDKVIMPTEFLMTAKVPRQQSTPFFRAWVKITEGCDNRCSYCMIPSIRGPLRSRSVADVL 179 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E + +V +GV+EI +I+QD +AYG D+ + S+ W RL Sbjct: 180 EEVQAMVASGVQEISLIAQDLTAYGDDLGDDVNLLVLLKELLAKTSV--------PWIRL 231 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+YP +D+++ LMA +I+ YLDIP+QH + R+L LM RP + + R Sbjct: 232 LYLYPSELLDELLQLMAANPRIVKYLDIPIQHVNDRVLHLMNRPYGRADLEEFVDKARAH 291 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LR+TF+VGFPGETEE++ + +FL+ +LD VG F YS EGA + PDQV +E Sbjct: 292 MPDIALRTTFLVGFPGETEEEYAEIGEFLRVRKLDHVGVFPYSNEEGAPSEHFPDQVDDE 351 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVY 411 +KE R R ++LQQ++S E ++ VG V+++ V EE + GR+ A ++DG VY Sbjct: 352 IKESRCARLLELQQELSTEIQKKYVGTVQKVLVEGVSEETDLLLEGRTQYQAADVDGRVY 411 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 +N E V G+I+ + + + +YDL G V Sbjct: 412 IN-EGQVVAGEIVDILITDSQQYDLVGGVV 440 >UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=174 Tax=Actinobacteria (class) RepID=MIAB_MYCA1 Length = 715 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 127/445 (28%), Positives = 207/445 (46%), Gaps = 20/445 (4%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDD-ADMVIVNTCGFIDSAVQESLEAI--- 67 + GC N+ DSER+ L GY + AD+V+ NTC ++A + + Sbjct: 33 VRTYGCQMNVHDSERLAGLLEAAGYRRAAEGAEVADVVVFNTCAVRENADNKLYGNLSHL 92 Query: 68 --GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + N ++ V GCL K+ + + P V + G H+ + + Sbjct: 93 APRKRSNPQMQIAVGGCLAQKDREAVLRRAPWVDVVFGTHNIGSLPTLLERARHNKAAQV 152 Query: 125 FLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 ++ +Q P A++ IS GCN+ CTFCI+PS+RG V R ++L+E + Sbjct: 153 EIAEALQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRGKEVDRSPDDILAEVR 212 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 LV GV E+ ++ Q+ +AYGV + + + L ++ R+ + Sbjct: 213 SLVADGVLEVTLLGQNVNAYGVSFADPALPRD----RGAFARLLRACGEIDGLERVRFTS 268 Query: 240 PYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 P+P DDVI MA+ + P L +PLQ S R+L+ M+R +R L I + R P Sbjct: 269 PHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVRAAMP 328 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + + IVGFPGETEEDF LD ++ AR F+YS G A L Q+P+ V Sbjct: 329 HAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAELDGQIPKAVV 388 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGA-VYLNGE 415 +ER+ R ++LQ+ IS + Q VG+ + +++ + + DG V+ + Sbjct: 389 QERYERLVELQESISLQGNQALVGQTVELLVATGEGRKDSATARMSGRARDGRLVHFAAD 448 Query: 416 TNVKPGDILRVKVEHADEYDLWGSR 440 V+PGD++ + A + L Sbjct: 449 DRVRPGDLVTTVITGAAPHHLIADA 473 >UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E278_DICTD Length = 441 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 119/450 (26%), Positives = 215/450 (47%), Gaps = 29/450 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 PK ++ GC N DSE++ L + GY ++AD++++NTC + A ++ Sbjct: 1 MPKYHIITYGCQMNKSDSEKVAGILESLGYIPSEKMEEADLILLNTCSVRERAEEKVFGK 60 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +GE K + + GC+ + ++++ E P V + G + + ++ + + Sbjct: 61 LGELRKLKKKNQKLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKVLESLNDNN 120 Query: 121 K------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K NP V + ++ + A++ I GCN+ CT+CI+P +RG SR E+ Sbjct: 121 KKIVLAEDNPKPEEVDFRIIRRENKFQAWIPIIYGCNNFCTYCIVPYLRGKEKSRDPQEI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + L + GV E+ ++ Q+ +YG D+ + + L ++ K+ R Sbjct: 181 IKEIEHLANQGVVEVTLLGQNVDSYGKDLGN-----------VDLADLLVEIHKIPGIKR 229 Query: 235 LHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + ++ +P D +I ++A KI P+ +PLQ S RIL+ M R + + A I++ Sbjct: 230 IRFLTSHPRDVSDKLINVVATHPKICPHWHLPLQAGSDRILRRMGRGYTYNEYKALIEKI 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P + + IVGFPGE EEDF L+E + D V YS G A + D V Sbjct: 290 RAKIPRASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAASYDDPV 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 P E K++ ++ LQ++I ER +G+E LV+ + V+ + + ++ E V+ Sbjct: 350 PYETKKKWFDELENLQRKIIYERNLSMIGKEELVLAEGVNPKNP--KELSGRTENYRLVF 407 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + G L V++ A + L G + Sbjct: 408 FEADRKL-IGKFLLVRIIEARLWSLRGEAI 436 >UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostridia RepID=B0KA65_THEP3 Length = 467 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 109/446 (24%), Positives = 209/446 (46%), Gaps = 25/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + F +LGC N ++E + + GY+VV + AD+ ++NTC + + +S + Sbjct: 32 KKTVAFYTLGCKVNQYETEVMAELFKKAGYEVVDFNEKADVYVINTCTVTNRSDMKSRQE 91 Query: 67 IGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I +A +N V+ GC + P+V G + ++++E V + K + Sbjct: 92 IRKARKKNPDALVVAVGCYVQVSPEEAFSLPEVDIAIGTKNKDKIVELVEEFTQKNQKLS 151 Query: 125 FLSLVPEQGV-------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++ + Q T R AY+KI +GCN CT+CIIP RG + SR +VL E Sbjct: 152 VVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYCIIPYARGPVRSRDPKKVLDE 211 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 KR D+G KEI++ ++YG D+K+ ++ + + + ++ RL Sbjct: 212 VKRFADSGYKEIVLTGIHIASYGKDLKN-----------IGLLDIIKMIHEIDGIKRIRL 260 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P ++ + +A K+ + + LQ LK M R + + I + RE Sbjct: 261 SSIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREY 320 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 ++ + + +VGFPGETEE+F F++E ++ FKYS +G A P+QV Sbjct: 321 IKDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQVANH 380 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 +KE+R + ++L + + ++ +G+ + V+ ++ + + + ++ + G Sbjct: 381 IKEDRSKKLIELSNRCEYKFMESFIGKTLEVLFEQPVKNME--GYVEGLTDNYLSIAVKG 438 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + + +I VK++ + L G Sbjct: 439 DIKLLRNEIFPVKIKEIKDNFLIGEI 464 >UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIN5_RHOVA Length = 469 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 132/454 (29%), Positives = 208/454 (45%), Gaps = 35/454 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES-- 63 P+ ++ + GC N+ DSER+ L G+ + +DAD+VI+NTC + A ++ Sbjct: 20 PEKRVFIKTFGCQMNVYDSERMADALGAAGFVETGAPEDADLVILNTCHIREKAAEKVFS 79 Query: 64 ----LEAIGEALNENG----KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHH 115 L + EA ++G + V GC+ E + V I GP SY ++ E + Sbjct: 80 ELGRLRVLREARRQDGGGNLMIAVAGCVAQAEGEEIARRAAVDIIVGPQSYHRLPELIER 139 Query: 116 Y--VPKPKHNPFLSLVPEQGVKLTPRHYA----YLKISEGCNHRCTFCIIPSMRGDLVSR 169 P + P+ A +L + EGC+ CTFC++P RG SR Sbjct: 140 RASTRGPVIETEFPAAEKFASLPAPKLRAAPSAFLTVQEGCDKFCTFCVVPYTRGAEYSR 199 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ +++ EAKRL + GV+EI ++ Q+ +A+ ++ L LS++ Sbjct: 200 PVAQIIEEAKRLAERGVREITLLGQNVNAW--------AGEGPSGKTWTLPDLLAALSEV 251 Query: 230 GIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 RL + +P D +I + K++PYL +P Q S RILK M R ++ L Sbjct: 252 NGIARLRFTTSHPNDMSDALIAAHRDLPKLMPYLHLPFQSGSDRILKAMNRKHRMEDYLR 311 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R+ P+L L + IVGFPGET+ DF+ + ++ + FKYSP G A Sbjct: 312 IVHRLRDARPDLALSTDIIVGFPGETDADFEETMRMVERVHFAQAYSFKYSPRPGTPAAD 371 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID--EVDEEGAIGRSMADAP 404 QVPE+VK ER R L VGR + V+ + +E +GRS P Sbjct: 372 RAAQVPEDVKSERLARLQALLFAQQTAFNAAMVGRTLSVLWESRGRNEGQVVGRSPYLQP 431 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 VY G+ + G I V++ A + L Sbjct: 432 -----VYAEGDPAL-IGHIADVEIVAASQNSLRA 459 >UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Aquificales RepID=MIAB_SULSY Length = 437 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 129/451 (28%), Positives = 221/451 (49%), Gaps = 34/451 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N+ DSE++ L+T GY ++++AD+++VNTC + Q+ L A+ Sbjct: 1 MKFYIKTFGCQMNVNDSEKMAGILQTLGYTPTENWEEADVILVNTCSVREKPDQKVLSAL 60 Query: 68 GEAL-----NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 GE N N + V GCL + +I + P + + G + + + K Sbjct: 61 GEFKKVKKHNPNAVIGVCGCLAQRAGYEIYQKAPFIDIVFGTTNIHHLPNLLEEAKSGNK 120 Query: 122 HNPFLSLVPEQGVKLT-------PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 L + E L ++ A++ + GC+ +CT+CI+P+ RG SR IG++ Sbjct: 121 AIEILEEIDENENLLDQFPTVRENKYTAFVTVIRGCDKKCTYCIVPTTRGRERSRRIGDI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + LV+ GVKEI +I Q+ +AYG D L + ++++ R Sbjct: 181 LREVQYLVEDGVKEIHLIGQNVTAYGKDFGD-----------VKFWELLKAVAEVDGVER 229 Query: 235 LHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P +D I +MA+ +I L +P+Q S RIL+ M R + L +I+ Sbjct: 230 IRFTTGHPRDLDEDTIKVMADLPQICEALHLPIQAGSDRILQAMDRGYTQKEYLQKIELL 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 ++ P + L + IVGFPGET ED+ + +KE D+V FKYSP G A LP Sbjct: 290 KKYIPNIALSTDIIVGFPGETYEDYLETVKVIKEVEYDQVFAFKYSPRPGTPAADLPMTE 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAV 410 E +R N + LQ+ I+ ++ E + + ++++E+++E +GR+ + V Sbjct: 350 SPEELSKRLNDLINLQKDITFKKNLEYQDKIVEILVEEINQENKLVGRTRTNK-----LV 404 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 Y G G ++ VK+E + + L GS + Sbjct: 405 YAEGSPEYL-GKLVNVKIEKVNRFSLEGSII 434 >UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Acidobacteria RepID=RIMO_SOLUE Length = 465 Score = 449 bits (1156), Expect = e-125, Method: Composition-based stats. Identities = 165/450 (36%), Positives = 247/450 (54%), Gaps = 27/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+GF+SLGCPKNLVDSE ++ +L +G+++ D AD+++VNTC FID A +ES++ I Sbjct: 1 MKVGFISLGCPKNLVDSEVMMGQLVAKGHELTSHPDQADVLVVNTCSFIDPAKKESVDTI 60 Query: 68 GEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E K+IV GCL + IR P+V + G + + +++ P Sbjct: 61 LEMAEYKKIGRAKKLIVAGCLVERYRGDIRTEMPEVDALIGTNELDSIVDICEGMPPSTN 120 Query: 122 -HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P+L V TPRH+AY+KI+EGC+H CTFC+IP RG SR V+SEA R Sbjct: 121 PLEPYLYHDLTPRVLATPRHFAYMKIAEGCDHPCTFCVIPQYRGAFRSRRFESVVSEATR 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG----IWTRLH 236 L G++EI +I QDT+ YG D+ +K + L +L+++ W R Sbjct: 181 LFQQGIREINLIGQDTTCYGEDLG----------LKDGLAELLARLAQIETPQEKWIRFL 230 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP ++ +AE + Y+D+PLQHAS +LK MKR S D L I++ R Sbjct: 231 YAYPNKVTQKLLDTLAEHAALAKYIDMPLQHASANVLKRMKRGASGDIFLKLIERIRRTI 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + +R++FIVGFPGET DF L F++ A+ D +G F YS + + + AL +V Sbjct: 291 PGVAIRTSFIVGFPGETAADFDELCAFVEAAKFDNLGVFTYSDEDTSASYALDGKVDGRT 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYL 412 + R R M +Q++I+ R + VG+E+ V++ V E R APEIDG + Sbjct: 351 IQNRKRRLMAIQRKIARARNRGLVGKEVPVLVSGVSGETDLLWEARMSTQAPEIDGVTLI 410 Query: 413 NGETNVKP--GDILRVKVEHADEYDLWGSR 440 N +P G+I R+++ A +YD+ G+ Sbjct: 411 NDFEGSEPRAGEIRRLRITEAHDYDVVGTL 440 >UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RIMO_NATTJ Length = 444 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 163/450 (36%), Positives = 255/450 (56%), Gaps = 28/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+G +SLGC KN VD+E + L Y + Y DAD++IVNTCGFID A +ES++ I Sbjct: 1 MKVGIISLGCAKNQVDTEVMQGILENSNYKMTDDYYDADIIIVNTCGFIDDAKEESVDHI 60 Query: 68 GEA--LNENGKV---IVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E L E GK+ IV GCL + + ++E P++ + G + +++ E + + Sbjct: 61 LEVAQLKETGKLKVLIVAGCLSQRYQESLKEEIPEIDAMIGTDTQDKITEVISSALKGNY 120 Query: 122 HNPF--LSLVPEQ---GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + L+ + EQ P AY+KI+EGC++ C++C IP +RG SR I ++ Sbjct: 121 ISFYDRLNKIDEQLFLRQPYQPGPSAYIKIAEGCHNYCSYCAIPLIRGGYRSRTIEDIKI 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTR 234 EA ++ G KE+ +I+QDT+ YG D+ K S+ +L ++L+ + W R Sbjct: 181 EANHFIEKGSKELTLIAQDTTNYGSDIYG----------KFSLDTLLDELATIPGDFWIR 230 Query: 235 LHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP D +I ++ KI YLDIPLQH IL M R G+ ++ L I R+ Sbjct: 231 VLYAYPTRITDSLIEVINRHEKICSYLDIPLQHIDDDILTSMNRGGNKEQILNLIHNLRK 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++TLR++ IVGFPGET+E +Q L+ F++E D G FKYS E A D+V E Sbjct: 291 NIPDITLRTSLIVGFPGETDEKYQNLISFMQEIEFDHAGIFKYSDEEDTQAYNFKDKVSE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEIDGAV 410 +VKE+R+ ++Q++I+ ++ + VG E+ V+I+E E+ +GR+ APE+DGAV Sbjct: 351 DVKEQRYQEAWEVQKEITRKKNEGLVGTEMRVLIEEALEDEPTTKVGRTEGHAPEVDGAV 410 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + GD + V++ A +YDL G Sbjct: 411 IIP-DCEASSGDFINVEIVQALDYDLIGEM 439 >UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2J3_9BACT Length = 452 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 174/446 (39%), Positives = 249/446 (55%), Gaps = 23/446 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 + VSLGC KNLVD+E I L T G + D+AD+ ++NTC FI +A E+ EAI Sbjct: 15 LYLVSLGCSKNLVDTEVIAGTLLTSGRTLAFEPDEADLYVINTCAFIPAARDEAREAIED 74 Query: 69 ----EALNENGKVIVTGCLGA--KEDQIREVHPKVLEITGPHSYEQVLEHVHH--YVPKP 120 + ++V GCL K+ +R+ +P+V TG + ++ + +P+ Sbjct: 75 GIVWKQEKPGRLLVVAGCLTEWDKDGSVRKEYPEVDLWTGVNQVAEIARLLDRQSTLPEN 134 Query: 121 KHNP-FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 P +L ++LT H AYLKI++GCN+RCT+C IP +RG L +RP+ V+ EA+ Sbjct: 135 AEEPVYLYDDCTPRLQLTLPHLAYLKIADGCNNRCTYCSIPGIRGRLRTRPMESVVREAR 194 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L++ GV+E+LVI+QD + YG D ++ L L+ L RL Y Sbjct: 195 NLIEGGVRELLVIAQDITVYGNDRPESGD---------TLARLLTALNALEGNFVIRLLY 245 Query: 238 VYPYPHVDDVIPLMAEG--KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P + ++ I MA G K+LPYLDIPLQH S RILK M R + + + + RE Sbjct: 246 THPAHYTEEFIDFMARGNTKVLPYLDIPLQHISDRILKQMNRHVTRKQTEELLTKLRERI 305 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P LTLR+TFI GFPGETEE++Q L F K+ + +R G F YSP A A PDQVP E+ Sbjct: 306 PGLTLRTTFITGFPGETEEEYQELKSFAKKFKFERCGVFPYSPEPRTPAAAFPDQVPAEL 365 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 E+R M+ Q I + + +VG+ + V++D+VDE GA+ R DAPEID +Y+ Sbjct: 366 AEQRSTELMKQQISIMKKLSKNQVGKTVRVLVDDVDENGAVARGAMDAPEIDNVIYIPKP 425 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 +KPG VK+ D DL V Sbjct: 426 KRLKPGKFCLVKITGTDGCDLIAELV 451 >UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Verrucomicrobia RepID=MIAB_METI4 Length = 467 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 231/454 (50%), Gaps = 33/454 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + + GC N+ DSE++L + GY + S AD++++NTC A +++++ Sbjct: 1 MPSVFIKTFGCQMNVRDSEQVLQDFIERGYQIASSEKWADIILINTCSVRAMAEEKAIDK 60 Query: 67 IG-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + N N + + GC+ + +I E + V + G + +V E + + P Sbjct: 61 LASLKTAKKKNPNLVLGIIGCMAQNRGREIAEKYRFVDLVLGTQKFHKVAEIADNLLKNP 120 Query: 121 KHNP-FLSLVPEQG--------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + ++ L E+ + + AY+ I +GC+ C+FCI+P+ RG+ SRPI Sbjct: 121 DRSSSYVDLSKEEAAHNAINKHLSTKAQPIAYVSIMQGCSMHCSFCIVPTTRGEERSRPI 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 E+ E KRL + VKEI+++ Q + YG K+ V L E+LS + Sbjct: 181 DEIFEEVKRLAETSVKEIVLLGQIVNRYG------AKEFPWVKGKSPFVQLLEKLSTIEE 234 Query: 232 WTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + P+P +D+I + + ++ ++ +P+Q S +ILK M+R S + L+ + Sbjct: 235 IKRIRFTSPHPLGFKEDLIAALRDIPQLCEHVHLPVQSGSDKILKAMRRGYSRSKFLSLV 294 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R+ P+L L + IVG+PGETEEDFQ L E R D F+YS EG A +L Sbjct: 295 DKLRKAIPQLALSTDIIVGYPGETEEDFQQTCSLLNEVRFDNAFIFRYSAREGTTAASLG 354 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPE 405 DQ+ EEVK ER R +++Q +I+ E+ Q+ VG+ + ++++ ++ A GR+ + Sbjct: 355 DQLSEEVKFERNYRLLEIQNKITMEKAQKWVGQVVEILVEGESKKNASKFQGRTRTN--- 411 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 V + + G+ L V++ + +G+ Sbjct: 412 --HLVIIPKNERWR-GEFLPVRIVETTGHTFYGT 442 >UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Proteobacteria RepID=MIAB_SYNAS Length = 461 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 34/452 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + I +LGC N+ DSE+I + +GY ++AD++I+NTC + A Q++ Sbjct: 17 KKHIYIQTLGCQMNVHDSEQIAALMEEKGYICTEDANEADLIILNTCSIREKAAQKAKSQ 76 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G N K + V GCL + D++ P + I G H+ Q+ + + Sbjct: 77 LGRYRNLKRKKRNLLIGVGGCLAQQLGDELLTKVPDIDFIFGTHNIHQLPDFISRIEKSR 136 Query: 121 KHNPFLSLVPEQ------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K +L P + + +++ I +GCN+ C++CI+P +RG SRP ++ Sbjct: 137 KKIVETTLHPSTPSIGVLALPCNGQVSSFVTIMQGCNNFCSYCIVPYVRGREESRPPEDI 196 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + L D GVKE+ ++ Q+ ++Y G L ++ K+ R Sbjct: 197 IHEIRMLADHGVKEVTLLGQNVNSYARKTSGEMG----------FAELLREIEKIKGIER 246 Query: 235 LHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P + +I ++ K+ ++ +P Q S RIL LM R + LA++++ Sbjct: 247 MRFTTSHPKDLSEFLITAFSDLSKLCHHIHLPFQSGSDRILALMNRGYTKSDYLAKVERL 306 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R +CP++++ + IVGFPGE++EDF+ +D + + R D + FKYS EG A + +V Sbjct: 307 RTVCPDISITADVIVGFPGESDEDFKETIDMMNQIRFDNLFSFKYSEREGTAAVKMDGKV 366 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEIDG 408 E +K ER LQ+Q + E+ + G++ V+++ + GR+ + Sbjct: 367 SEPLKLERLQILQALQEQHTLEKNKAMEGKQEDVLVEGFSKNCRKDLTGRTSTNK----- 421 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V +G ++ GD++ V ++ A + L G Sbjct: 422 IVNFSGCVDL-IGDMVSVLIKEAYLHSLRGEM 452 >UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Veillonellaceae RepID=D1BNC4_VEIPT Length = 448 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 169/452 (37%), Positives = 268/452 (59%), Gaps = 25/452 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+G+VSLGC KNLVD+E +L LR GY + +AD+++VNTC FI+ A ES+ I Sbjct: 3 KKLGYVSLGCAKNLVDTEVMLGLLRDNGYSITEDLSEADLIVVNTCTFIEKAKAESINTI 62 Query: 68 GEALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQV---LEHVHHYVP 118 E +IV GCL + +D++ + P++ + G +++QV ++ + H Sbjct: 63 LEVAQYKEDGACKGLIVAGCLSQQYQDELFQEIPEIDALIGTGAWDQVMVAVDAIEHGNR 122 Query: 119 KPKHNPFLSLVPEQ--GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 ++ E+ ++ TPR+ AY+KI+EGCN+ CTFCIIP +RG SR I + + Sbjct: 123 SCIMENITNIYDERMPRIQTTPRYSAYVKIAEGCNNGCTFCIIPKVRGAFRSRTIESIKA 182 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E +RL GVKE+++I+QDT++YG+D+ NG+P+ T+++ + + W R+ Sbjct: 183 EVERLAATGVKEVVLIAQDTTSYGIDLN------NGKPLLTTLLKELTTVEGIE-WIRML 235 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y+YP D+++ ++ E K+ Y+DIPLQH + ILK M R + +K+ R Sbjct: 236 YLYPTFFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDDRNDIERLLKKIRNAP 295 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 +TLR++ IVGFPGET+E F+ L DF+KE + D +G F YS G A A DQ+PEEV Sbjct: 296 THITLRTSIIVGFPGETDEQFEELCDFVKEIKFDNMGVFTYSQEAGTPAGAREDQIPEEV 355 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-----AIGRSMADAPEIDGAV 410 KEER++ M +Q IS E ++ G +++E++E A GR + AP++DG + Sbjct: 356 KEERYHVLMSIQAAISEENNRDLEGTIDYAMVEEIEEGENNTLLAKGRLKSQAPDVDGNM 415 Query: 411 YL-NGETNVKPGDILRVKVEHADEYDLWGSRV 441 Y+ + +++PGDIL+V+VE YD+ + V Sbjct: 416 YIEDCGEDIQPGDILKVQVEQGFAYDVVATVV 447 >UniRef50_Q0AXI3 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RIMO_SYNWW Length = 439 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 167/445 (37%), Positives = 259/445 (58%), Gaps = 25/445 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 IGF+SLGC KN VD+E ++ L+ G+ +V S + AD+V+VNTCGFI A +ES+EAI E Sbjct: 3 IGFISLGCSKNRVDTEVMMAALKKAGHRIVNSLERADLVVVNTCGFITPAKEESIEAIIE 62 Query: 70 ALNENGK-----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH- 122 K +I GCL + ++ P++ + G S + V+ + Sbjct: 63 TAELKKKGSLQFLIAAGCLSQRYGRELLLEIPELDGVFGISSVSSIAGVVNRIAQGERVC 122 Query: 123 ----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 P + TP AYLKISEGCN+ C++C+IPS+RG L SR I E+L+EA Sbjct: 123 FTEATPTEYFEKGHRILTTPPGSAYLKISEGCNNSCSYCVIPSIRGKLRSRQINELLNEA 182 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 +L+ G+KE+++++QDTSAYG D+ ++ ++ +L +LSKL W RL Sbjct: 183 AQLLKMGIKELVLVAQDTSAYGHDISPQS----------ALPTLLRELSKLDGLEWIRLM 232 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y++P DD+I ++A E K+LPYLDIP+QHAS +ILKLM R I + R Sbjct: 233 YLHPLYLSDDIIDVVAYENKVLPYLDIPIQHASSKILKLMHRRHDNSHLRTMISKLRARI 292 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P LTLR+T ++GFPGE E+DF L +F+ E++ D +G F + P EG+ A LP+Q+ +E+ Sbjct: 293 PNLTLRTTVMLGFPGEEEKDFAELYEFVAESQFDWLGAFSFVPEEGSKAALLPNQIEDEI 352 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-DEEGAIGRSMADAPEIDGAVYLNG 414 K ER ++ ++LQQ+I+ ++ ++ + V+I + +GR+ APE+DG + Sbjct: 353 KAERKDKILRLQQKITRQKNLARINTQEKVLISSQLSKNLFVGRTYFQAPEVDGLTLVKT 412 Query: 415 ETNVKPGDILRVKVEHADEYDLWGS 439 + + GD + V++ YD+ G Sbjct: 413 DFKLTKGDFVDVQLVGVRNYDMIGE 437 >UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacteria RepID=B9KY11_THERP Length = 458 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 130/443 (29%), Positives = 218/443 (49%), Gaps = 26/443 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + ++GC N +S + LR GY DAD+VIVNTC A ++L I Sbjct: 21 KRFHIWTIGCQMNEAESAKAAALLRQAGYVPAVREWDADIVIVNTCVVRQQAEDKALGYI 80 Query: 68 G-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + + ++ VTGCL +E ++ E P V GP +E+++ V Sbjct: 81 GALARLKRRRPDVRIAVTGCLVTGQERRLAERFPWVDLWYGPSEFERLVSLVPELADVDI 140 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 L ++G + P A++ + GCN C++CI+P RG SRP+ +V++E ++L Sbjct: 141 DLVELPHYYDEG-QADPEVTAFVPVIYGCNFVCSYCIVPYRRGRERSRPVEQVVAEVEKL 199 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 GV+E+ ++ Q +AYG D+ P + + L E++ + R+ ++ + Sbjct: 200 AARGVREVTLLGQTVNAYGHDL----------PGQPDLADLLERVHDVPGIERIRFLTSH 249 Query: 242 P--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D +I +A+ K+ ++++P+Q +L+ M+R +V+ RI + RE+ P++ Sbjct: 250 PKYFSDKLIRAVADLPKVCEHVNLPVQSGDNEVLRRMRRHYTVEEYRERIARIRELIPDV 309 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 TL + IVGFPGETEE F L+E R D+V YSP G + PD VP E K Sbjct: 310 TLSTDIIVGFPGETEEQFLNTYRLLEEIRFDKVHVAMYSPRPGTLSARWPDDVPREEKRR 369 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R QLQ++I+ ER + VGR + +++D + GR+ + V+ + Sbjct: 370 RHRAVEQLQERIARERNERYVGRTVEILVDGLARGRWRGRTRGNT-----LVFFEAPGDW 424 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 + G + V+V A + L G V Sbjct: 425 R-GRFVEVRVTQASPWYLLGEPV 446 >UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6H1_ACIC5 Length = 512 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 176/494 (35%), Positives = 255/494 (51%), Gaps = 65/494 (13%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + +P+IGFVSLGCPKNLVDSE ++ L G + AD+++VNTC FID+A Q Sbjct: 13 AADSARPRIGFVSLGCPKNLVDSEVMMGLLDRAGGVMTQDAASADILVVNTCSFIDAAKQ 72 Query: 62 ESLEAIGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ I E K+IV GCL + D+I++ P+V + G E+VLE Sbjct: 73 ESVDTILEMAQHKTTGRAQKLIVAGCLVERYRDEIQKNIPEVDAVVGTGELEKVLEAAGL 132 Query: 116 YVP---KPKHNPF-------------------------------------LSLVPEQGVK 135 +P +PF L ++ Sbjct: 133 ALPPAPAASDSPFTILSAGVAARPEGELREQQGRFDREQWDGATAALPQYLYDHTTPRLR 192 Query: 136 LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQD 195 T AY+KI+EGC+H C+FC+IP++RG SR V++EA+ LV GV+EI +I QD Sbjct: 193 ATRSASAYIKIAEGCDHPCSFCVIPNLRGKFRSRRFESVVAEAQSLVAQGVREITLIGQD 252 Query: 196 TSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIPLMA- 252 T+ YG D+ +K + L E+L+++ W R Y YP ++ +A Sbjct: 253 TTCYGEDLG----------LKDGLALLLERLAQIEGLLWLRFLYAYPNKITGKLLDTIAK 302 Query: 253 EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGET 312 I YLD+PLQHAS +LK MKR + + L I++ R P L LR++FIVGFPGET Sbjct: 303 HDNICKYLDVPLQHASGAVLKSMKRGANAEILLKTIEKARARVPGLVLRTSFIVGFPGET 362 Query: 313 EEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISA 372 EDF L F+++A++D +G F YS EG+ A L ++P E+R M+ QQ IS Sbjct: 363 AEDFATLQQFVRDAQIDWLGVFTYSDEEGSKAFDLEGKLPRRTIEQRKRALMKQQQGISR 422 Query: 373 ERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNG---ETNVKPGDILRV 426 Q+ VGR + V+++ EE GR+ APEIDG VYLN ++ PG R Sbjct: 423 RAKQQWVGRVVDVLVEGESEETPLLWQGRTAWHAPEIDGVVYLNDFGPFESLTPGRFYRC 482 Query: 427 KVEHADEYDLWGSR 440 ++ A +YD+ Sbjct: 483 EITEAHDYDVVARV 496 >UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=9 Tax=Fusobacterium RepID=MIAB_FUSNN Length = 435 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 124/451 (27%), Positives = 216/451 (47%), Gaps = 32/451 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K ++ GC N+ +S +I + GYDV D+AD V +NTC + A + Sbjct: 1 MKKASIITYGCQMNVNESAKIKKIFQNLGYDVTEEIDNADAVFLNTCTVREGAATQIFGK 60 Query: 67 IGEAL----NENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 +GE + VTGC + +++ + P + + G + ++ + + Sbjct: 61 LGELKALKEKRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIEKIENNES 120 Query: 122 HNPF-----LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + L P + A + I+ GCN+ CTFCI+P +RG S P+ E++ Sbjct: 121 THEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYVRGRERSVPLEEIVK 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + ++ V G KEI+++ Q+ ++YG D K+ + L +++ K+ + Sbjct: 181 DVEQYVKKGAKEIVLLGQNVNSYGKDFKNGD----------NFAKLLDEICKVEGDYIVR 230 Query: 237 YVYPYP--HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +V P+P DDVI ++A+ K I L +PLQ S +ILK M+R + ++ LA + + + Sbjct: 231 FVSPHPRDFTDDVIEVIAKNKKISKCLHLPLQSGSSQILKKMRRGYTKEKYLALVDKIKS 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P + L + IVGFPGETEEDF +D +++ D F YS +G A + +Q+ E Sbjct: 291 KIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSFDNSYMFMYSIRKGTKAATMDNQIEE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDGAV 410 VK+ER R M++Q + S + GR + V+++ ++E GR+ + V Sbjct: 351 SVKKERLQRLMEVQNKCSFYESSKYKGRIVKVLVEGPSKKNKEVLSGRTSTNK-----IV 405 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G +K G + VK+ + L+G V Sbjct: 406 LFRGNLALK-GQFINVKINECKTWTLYGEIV 435 >UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBM1_FUSMR Length = 445 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 182/452 (40%), Positives = 260/452 (57%), Gaps = 29/452 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEG-YDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ +SLGC KNLVDSE L L ++ +AD+VIVNTCGFI A +ES+E Sbjct: 1 MKLALISLGCSKNLVDSEHYLGILSKRKEMELTSELSEADIVIVNTCGFIGDAKEESIET 60 Query: 67 IGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP-- 118 I E K+IV GCL K ++I + P+V + G +++ + V + Sbjct: 61 ILEVSEFKETGNLKKLIVAGCLAQKYSEEILKELPEVDAVIGTGDIDKIEKVVDEILENK 120 Query: 119 ---KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + K+ FL+ + V T H AYLKISEGCN CT+CIIP MRG L SR I +++ Sbjct: 121 KVVETKNMTFLANANTERVLTTASHTAYLKISEGCNRACTYCIIPQMRGRLRSRSIEDIV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 EAKRLV +GV+EI +++Q+T+ YG+D+ + +L ++L K+ W Sbjct: 181 EEAKRLVASGVREINLLAQETTEYGIDLYGD----------KKLAALMKELCKIEGLKWL 230 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +Y++P D++I +M E KI Y D+P+QH S IL+ M R S ++ + + R Sbjct: 231 RTYYMHPEYVTDELIEVMKSEEKICKYFDVPIQHVSDNILRNMARAKSGEQVKDVLNRIR 290 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + PE T+R+T IVGFPGETEE+FQ L+D+++E D G FKYS E A LP+QVP Sbjct: 291 KAIPEATIRTTLIVGFPGETEENFQELMDYVREFEFDYAGVFKYSREEDTVAYNLPNQVP 350 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGA 409 EE+KE+R+ + LQ +I+ + + +G EI V+ID V E GR+ A EIDG Sbjct: 351 EEIKEKRYAELVNLQSEIAERKNRRLLGEEIEVMIDGVSSESEYLLEGRTRGQALEIDGK 410 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V L + KPG+I++VK E EYD G V Sbjct: 411 V-LTTDGTAKPGEIVKVKFEQNFEYDFVGPIV 441 >UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y777_9FIRM Length = 460 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 171/448 (38%), Positives = 253/448 (56%), Gaps = 24/448 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 K KIG VSLGC KNLVDSER++ LR G+++V +A+ +IVNTCGFI+ A + Sbjct: 15 EKKGINMKIGVVSLGCCKNLVDSERMMGLLRQSGHEIVSDVHEAEAIIVNTCGFIEPAKE 74 Query: 62 ESLEAIGEA---LNEN-GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHY 116 E++ I E NEN K+IV GCL + + P+V Y ++ + + Sbjct: 75 EAINTILEMAEYKNENCRKLIVAGCLAQRYKADLEAEMPEVDCFLTISDYPKMGQILTRV 134 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + + + + T AYLKI+EGC++RC++C IP +RG VS PI ++++ Sbjct: 135 LGEKVLDGYG---KNTRLVSTKPWTAYLKIAEGCDNRCSYCAIPGIRGGYVSFPIEDLVA 191 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 EAK+L GVKE++VI+QDTS YG D+ R + L +L+ + W R Sbjct: 192 EAKQLASEGVKELVVIAQDTSRYGTDLYGR----------RRIWDLLTELNAIDGLHWIR 241 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y+YP D+ + + + K++PY DIP+QH S ++LKLM R GSV+ L +K RE Sbjct: 242 VLYLYPDEIDDEFVTGIKDLKKVIPYFDIPVQHGSDKMLKLMNRRGSVESILRTVKLIRE 301 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 LR+T IVGFP ETEEDFQML+DF+KE R DR+G F +S E A + Q+ + Sbjct: 302 NYDMPVLRTTMIVGFPQETEEDFQMLIDFIKEVRWDRLGAFTFSNEEDTPAYTMDGQISQ 361 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPE-IDGAV 410 E+ +ER R M +Q QI+ E + +G+ + V+++ D GR + AP+ IDG + Sbjct: 362 EIMDERLERLMTVQNQIAQENGEALIGKTLEVLVENQDGLTGYYHGRGIHSAPDGIDGLI 421 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 + +PG VKV A +DL G Sbjct: 422 KFKSSHHYQPGTFAWVKVTKAKHHDLIG 449 >UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=11 Tax=Clostridiales RepID=MIAB_DESHY Length = 447 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 121/457 (26%), Positives = 218/457 (47%), Gaps = 34/457 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 MS K+ ++ GC + D++ + +GY + AD++IVNTC +SA Sbjct: 1 MSITKVPKKVVTLAYGCQMSERDADTLTEISSQKGYVRSQELEQADLIIVNTCCVRESAE 60 Query: 61 QESLEAIGEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEH 112 + L IGE N K+ ++GC+ + +++R+ P V G H+ + Sbjct: 61 NKILGKIGELKHLKEANPQLKIAISGCMVQQPGALERLRKRAPHVDIWAGTHNIHEFQRL 120 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + K K E + + AY+ IS GCN+ CT+CI+P +RG S Sbjct: 121 LEEAEEKGKVAEVWEKPRETQESVLLAAKGKLKAYVNISYGCNNFCTYCIVPHVRGRERS 180 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 R E+L+E + LV+ G +E+ ++ Q+ ++YG D+ L + + Sbjct: 181 RQPEEILAEIRALVETGCREVTLLGQNVNSYGQDLDR----------AYDFADLLKDVDS 230 Query: 229 LGIWTRLHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ ++ +P D +I +A G + ++ +P Q S ILK M R + + L Sbjct: 231 IDGLWRVRFMTSHPKDLSDKLIETIAAGTHLCEHIHLPFQAGSDEILKGMNRKYTREYYL 290 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 +RI Q + I P+++L + IVGFPGETEEDF+ L+ +++ R + F YS G A Sbjct: 291 SRIAQIKVIIPQVSLTTDIIVGFPGETEEDFEQTLELIRQVRYSQAFTFMYSKRSGTPAA 350 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMAD 402 + +Q+P ++K+ R + + +Q S QE +G+ V+++ + + GR+ Sbjct: 351 QMAEQIPLDIKKRRLQQLITVQNAQSLAWRQEMIGKTCEVLVEGPSKSNPDRLTGRTRGY 410 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 V GE + G +++V ++ A+ + L+G Sbjct: 411 -----ELVVFPGEAQL-IGTLVQVLIQDANSWTLFGE 441 >UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_BACFN Length = 457 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 125/456 (27%), Positives = 203/456 (44%), Gaps = 28/456 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + K+ + GC N+ DSE I + ++ GY V + ++AD V +NTC D+A Q Sbjct: 12 ATADDNKKLFIETYGCQMNVADSEVIASVMQMAGYSVAETLEEADAVFMNTCSIRDNAEQ 71 Query: 62 ESLEAIG-----EALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 + L + + ++ V V GC+ + H V + GP +Y + E + Sbjct: 72 KILNRLEFFHSMKKKKKHLIVGVLGCMAERVKDDLIEHHHVDLVVGPDAYLTLPELIASV 131 Query: 117 VPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 K E + P ++ I GCN+ CT+CI+P RG SR Sbjct: 132 EAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTRGRERSRD 191 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 + +L+E LV G KEI ++ Q+ ++Y R GE V M+ + G Sbjct: 192 VESILNEVADLVSKGYKEITLLGQNVNSY------RFEKEGGEVVTFPMLLRLVAEAAPG 245 Query: 231 IWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 I R +P D+ + ++A+ + ++ +P+Q S RILKLM R + + L R+ Sbjct: 246 IRVRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVA 305 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LP 348 + I P+ L + GF ETEED + L ++ D FKYS G A+ L Sbjct: 306 AIKRIVPDCGLTTDIFSGFHSETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHLE 365 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPE 405 D VPEE+K R N + LQ ++SAE +G+ V+++ V + + GR+ + Sbjct: 366 DNVPEEIKVRRLNEIIALQNRLSAESNNRCIGKTYEVLVEGVSKRSRDQLFGRTEQNR-- 423 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + GD + V++ A L G V Sbjct: 424 ----VVVFDRGTHRIGDFVNVRITEASSATLKGEEV 455 >UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=MIAB_THEYD Length = 431 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 127/447 (28%), Positives = 215/447 (48%), Gaps = 38/447 (8%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE---SLEA 66 + + GC N DSER+L L T+G+ V AD+VI NTC A Q+ SL Sbjct: 6 VYIKTFGCQMNEHDSERMLGILGTKGFIEVDEPKKADIVIFNTCAIRHKAEQKFFSSLGR 65 Query: 67 IGEALNENG--KVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + +N K+IV GC + +++ P + I GP + + + + V H Sbjct: 66 VKHLKKKNPQLKIIVAGCSAQLQGEKLLNKLPYIDYIIGPDNLHVIENIIENQV---SHR 122 Query: 124 PFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F PE P A++ I GCN+ CT+C++P RG SRP+ +++ E Sbjct: 123 IFTDENPEVANINLPVKRKDCVKAWVNIIYGCNNYCTYCVVPYTRGKERSRPVDDIIKEI 182 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 L + G KE+ ++ Q+ ++Y + T+ L E++ K+ R+ ++ Sbjct: 183 SLLAEQGYKEVTLLGQNVNSY-------------KDGNTNFPLLLEKVEKIEGIKRIRFI 229 Query: 239 YPYPH--VDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P +++ +M + K I ++ +PLQ S +ILKLM R + + +I RE Sbjct: 230 TSHPKDLSKELVDVMKDYKKICEHIHLPLQAGSNKILKLMNRKYTYEEYFEKICWLREAI 289 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P++ + S IVGFP E EDF+ ++ LKE R D + FK+SP G A L + EEV Sbjct: 290 PDIAITSDIIVGFPQEQHEDFEKTINALKEIRFDGIFAFKFSPRLGTAAAKLDGHISEEV 349 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAVYLNG 414 K R ++LQ +I+ + + G+ V+++ DEEG G++ + + Sbjct: 350 KAARLIEVLKLQDEITERKNKRLEGKIQEVLVEGKDEEGFTTGKTRTNK-------VVKI 402 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 +++K G+I+ VK+ + L G + Sbjct: 403 YSDIKAGEIVNVKIAKTHRHSLEGDII 429 >UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=RIMO_ALKOO Length = 438 Score = 444 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 154/442 (34%), Positives = 250/442 (56%), Gaps = 22/442 (4%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 +GF+SLGC KNLV +E I+ ++ +++V +DA+++++NTCGFI+SA QE++ I E Sbjct: 3 VGFISLGCSKNLVVTEEIIGLFKSNHFNIVNKKEDAEIIVINTCGFIESAKQEAINTILE 62 Query: 70 ALNEN----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 +IV GCL + ++ + P+V Y+Q+ + + + + + Sbjct: 63 MAKLKNNKCKYLIVAGCLVQRYKKELEKAIPEVDLFISISEYKQIWKEIENLL-DLETGK 121 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 +L V T + AYLKI EGC++ CT+C IP+++G +SR + ++L EA+ L Sbjct: 122 ESNLDYHNRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYISRTMEDILKEARNLAKQ 181 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYP 242 G+KE++VI+QDT+ YG+D+ + + L E+L K+ W R YVYP Sbjct: 182 GIKELIVIAQDTTKYGLDIYG----------EARLPQLLEELCKIEDIEWVRFLYVYPES 231 Query: 243 HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++I ++ E KI Y DIP+QH S +LK M R I++ R P++ +R Sbjct: 232 ITDELIKVVGENDKICNYFDIPIQHISDSVLKRMNRKSDGASVRNIIEKIRREIPDVIIR 291 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 +T IVGFPGETEEDF+ L +F++E + D++G F YS + A L +Q+ K+ R Sbjct: 292 TTLIVGFPGETEEDFKELYEFVEETKFDKLGVFAYSKEDNTPAAKLKEQIHHATKKSRLR 351 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVY-LNGETNV 418 + M LQ++IS E L++KVG V+I+ + G IGR+ D P++DG VY +N Sbjct: 352 KIMALQEKISRESLEQKVGNVYKVLIESRTKGGNYYIGRTYMDVPDMDGVVYIVNNTKEN 411 Query: 419 KPGDILRVKVEHADEYDLWGSR 440 + +++ A +YDL+G Sbjct: 412 LMNTFVDCRIQRAKDYDLFGEL 433 >UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Anaerococcus RepID=C7HUB2_9FIRM Length = 452 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 114/450 (25%), Positives = 203/450 (45%), Gaps = 29/450 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K + GC N DSERI L GY +DAD ++ NTC ++A + Sbjct: 15 NKKYNITTFGCQMNEHDSERISYILEDLGYTKTDDRNDADFILFNTCLVRENAELKLYGQ 74 Query: 67 IGEAL-----NENGKVIVTGCLGA---KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + N + V+GC+ + I + H +V I G + + + + Y+ Sbjct: 75 VSSLKKLKEENPEKIIAVSGCMMQTSVAREVIEKKHKEVDIIFGTKNINSLPDLLFKYLE 134 Query: 119 KPKHNPFLSLV----PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + +S AY+ I GC++ C++CI+P RG SR + Sbjct: 135 TGERVIDVSEDNVKDDYVNYNSKNNFQAYVNIMRGCDNFCSYCIVPQSRGREESRRPSHI 194 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + LV G KEI ++ Q+ ++YG N + L E+ +K+ R Sbjct: 195 IEEIENLVKNGYKEITLLGQNVNSYG----------NKSDFNVTFPELLEKCAKIEGLQR 244 Query: 235 LHYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 L + +P DD+I ++ E I Y +P+Q S ++LK M R + ++ L + ++ Sbjct: 245 LRFTTSHPKDLSDDLIRVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEKARKL 304 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +E P + + + IVG+P ETEEDFQ LD ++ D FKYSP A L D + Sbjct: 305 KEEIPGIAISTDIIVGYPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKL-DPI 363 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 +++ ++R++R + I E+ +E VG+ + V+++ + + + V+ Sbjct: 364 DDKIVQDRFDRLLDTLYPIFNEKNKEYVGKVVEVLLESESKNNK--NVLTGRTDTFKLVH 421 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + N+ G I++VK+ + + G V Sbjct: 422 VKADKNL-IGQIVKVKITDNTSFTISGELV 450 >UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N968_9BACT Length = 446 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 118/455 (25%), Positives = 208/455 (45%), Gaps = 30/455 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI + GC N DSE L G+ +V S + AD+++ NTC + A ++++ I Sbjct: 1 MKIFIKTYGCQMNERDSEAFAGMLVEAGHTMVDSEEQADVLLFNTCSVREQAERKAIGKI 60 Query: 68 GEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G K + GC+ + + + + P + + G ++ + + Sbjct: 61 GFMKKLKAKHPELIIGAMGCMAQRLGNDLLKELPHLDFVLGTGQLHTLVPLIESIRADRR 120 Query: 122 HNPFLSLVPEQGVKLTPRHY---------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 L+ + + A + I+ GCN C++CI+P +RG +SR G Sbjct: 121 QVASLNESEAVLTGMGSHYRPAGDVRNWHAQIAITRGCNRFCSYCIVPYVRGREISRDPG 180 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 +V+ EA+ LV AG +E++++ Q+ +AYG+ + E + L E+L ++ Sbjct: 181 DVVREARELVAAGARELMLLGQNVAAYGL----GGNTNPPEDGSSPFAELLEELDRIPEL 236 Query: 233 TRLHYVYPYP--HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ + PYP +I +A+ + + + +PLQ S R+LK M R + D L + Sbjct: 237 LRIRFTSPYPTYFNGRLIDAIAKSRTVCHNIHLPLQSGSDRMLKAMNRQYTHDSYLEVVN 296 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + R P++T + IVGFPGET+ DF+ + + D FKYSP GA + AL D Sbjct: 297 RIRAAMPDVTFSTDVIVGFPGETDGDFKQTREVMNTVGFDNSFIFKYSPRPGARSAALAD 356 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEI 406 VP+EVKEER + + L++++G ++++ V GR+ + Sbjct: 357 SVPQEVKEERNQILLNDLKLRVEAFLKQQIGTTQEILVEGVSPRNPARWCGRTGTNR--- 413 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++ E ++ G + V V A L+G V Sbjct: 414 --LIHFEPEEGLQAGTLRSVTVTRAGSVSLFGELV 446 >UniRef50_A8UT74 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UT74_9AQUI Length = 422 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 166/439 (37%), Positives = 251/439 (57%), Gaps = 22/439 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+G +SLGC KNLVDSE +L L++ G ++ + AD ++VNTCGFI+ A +ES++ I Sbjct: 1 MKVGVISLGCSKNLVDSEILLARLKSAGVELTSDIESADCIVVNTCGFIEDAKRESIDTI 60 Query: 68 GEALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 EA++ KV+V GCL + ++ + +V G S++++L+H+ + P+ Sbjct: 61 LEAIDTGKKVLVMGCLVERYRKELEKELTEVEGFFGTQSWDEILKHLG--LQPKYSAPY- 117 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 + TP YAY+KI+EGCN C+FC IP +RG +SRP+ +++SE K L GV Sbjct: 118 ------RLLTTPTSYAYVKIAEGCNRLCSFCAIPKIRGRHLSRPVEDIVSEVKDLASRGV 171 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 KEI ++SQDT+ YG D+ + + W RL Y+YP D Sbjct: 172 KEIDIVSQDTTYYGKDLYREYRLTELLKELEEVEGI--------EWIRLLYLYPTEVSDQ 223 Query: 247 VIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 +I + + K+LPY D+P+QH S ++LK M+R I++ R PE LR+T I Sbjct: 224 LISYIRDSEKVLPYFDMPIQHISSKVLKSMRRGYDEGFVRRLIEKIRSEIPEAVLRTTLI 283 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VG+P E EEDF+ LL+F++E +G F YSP E A L D +P+E+KEER ++ Sbjct: 284 VGYPNEDEEDFRRLLNFVEEGHFHWLGVFTYSPEEDTGAFPLGDPLPQELKEERKETLIE 343 Query: 366 LQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLNGETNVKPGD 422 Q++I+A + VG+ VI+D E + GR+ APE+DGAVY+ E +K GD Sbjct: 344 AQRKITARKNASLVGKRFKVIVDGFSSEFSFVPKGRAYLHAPEVDGAVYIESEEPLKVGD 403 Query: 423 ILRVKVEHADEYDLWGSRV 441 + V++ A +YDL G V Sbjct: 404 RVEVEITQATDYDLGGRVV 422 >UniRef50_Q7UK39 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Planctomycetaceae RepID=RIMO_RHOBA Length = 477 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 178/457 (38%), Positives = 263/457 (57%), Gaps = 28/457 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 P+ + VSLGCPKNLVD+E++L L +GY +V S D AD V+VNTCGFIDSA Sbjct: 26 ETGKPRGRYAVVSLGCPKNLVDTEQMLGRLDADGYRMVDSVDGADFVVVNTCGFIDSARD 85 Query: 62 ESLEAIGE--ALNENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES+ AI E AL +GK V+VTGCL ++ D++ + P + + G ++ V Sbjct: 86 ESMAAIDEMLALKRDGKLRNVVVTGCLAERQQDKLLQARPDIDALVGVFGRNDIVSVVDE 145 Query: 116 YVPKPKHNP-------FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + L +TPRH+AYLKISEGC+ CTFC IP MRG S Sbjct: 146 LYSGLQEQRTIFKPAAVNPLSDAMRSAVTPRHFAYLKISEGCDRLCTFCAIPKMRGKHFS 205 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 +PI +++ EAKRL D+GV+E+++++QDT+ YG+D GEP ++ +++ Sbjct: 206 KPIEQIIDEAKRLGDSGVREVVIVAQDTTYYGMDRY-------GEPRLNQLLKELDKIES 258 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 + W RL Y YP D +I +A + I+PY+D+PLQHAS ++LK M R + Q Sbjct: 259 ID-WIRLMYFYPMYIDDALIDTLASARRIVPYIDMPLQHASDKMLKRMARKTTRSLQTDI 317 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 +++ R L +R+T I GFPGETEEDF L+DF++E+R + +G F YS E A L Sbjct: 318 VQKLRSRIDSLVMRTTMITGFPGETEEDFVELMDFVQESRFENLGVFTYSIEEDTPAARL 377 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAP 404 P++V EV R + M+LQQQI+ + +VG V+ID E IGR+ ++AP Sbjct: 378 PNRVDPEVAARRRDDLMELQQQIAFDWNDSRVGGTEEVLIDAEMPEQDNVFIGRTRSEAP 437 Query: 405 EIDGAVY---LNGETNVKPGDILRVKVEHADEYDLWG 438 ++DG +Y ++ ++ V+ G I ++ + YDL Sbjct: 438 DVDGLIYVSQVDPDSPVEVGQIRPCEIVASQGYDLVA 474 >UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=20 Tax=cellular organisms RepID=MIAB_PROM3 Length = 480 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 112/449 (24%), Positives = 199/449 (44%), Gaps = 27/449 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + GC N DSER+ L GY P+ +AD+V+ NTC D+A Q+ +G Sbjct: 31 FWIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQKVYSYLGR 90 Query: 70 ALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHS---YEQVLEHVHHYVPKP 120 K++V GC+ +E + + P++ + GP E +L V + Sbjct: 91 QARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQVDNGQQVV 150 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + L + A++ + GCN RCT+C++PS+RG SR + E + Sbjct: 151 ATDDNHILEDLTTARRDSTICAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLEIEG 210 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 L G +EI ++ Q+ AYG D+ G + ++ L + + R+ + Sbjct: 211 LAARGFREITLLGQNIDAYGRDL---PGITPEGRRQNTLTDLLHHIHDVEGIERIRFATS 267 Query: 241 YP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P + +I + K+ + IP Q +LK M R +V+R + + RE+ P+ Sbjct: 268 HPRYFTERLIEACFDLPKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELMPD 327 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + IV FPGET+ FQ L+ ++E D+V YSP A +Q+PE VK Sbjct: 328 AAISTDVIVAFPGETDAQFQNTLNLVEEVGFDQVNTAAYSPRPNTPAATWSNQLPEVVKV 387 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEIDGAVYLNG 414 ER + L ++++ +R G+ V+ + ++ + +GR+ + + Sbjct: 388 ERLKQLNALVERVALQRNSRYSGKVEQVLAEGINPKKPQQLMGRTRTNR-----LTFFAA 442 Query: 415 ETN----VKPGDILRVKVEHADEYDLWGS 439 E PGD++ V++ + L G+ Sbjct: 443 EGPQSCRYSPGDLVDVQINSVRAFSLSGT 471 >UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Thermotogaceae RepID=MIAB_THEP1 Length = 443 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 129/447 (28%), Positives = 217/447 (48%), Gaps = 30/447 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + + GC N DSE + L EG+ + ++AD+VI+NTC + +++ + Sbjct: 1 MRFYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSEL 60 Query: 68 GEALNENGK----VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 G+ L K V V GC+ KE + + + + G + +V E V + K Sbjct: 61 GQMLKIKRKRKLVVGVAGCVAEKERE-KLLERGADFVLGTRAVLKVTEAVKRALQGEKVA 119 Query: 124 PFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F + E +L + +H+A++ I GC+ CT+CI+P RG SRP+ ++L E + Sbjct: 120 LFEDHLDEYTHELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEVR 179 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV- 238 L G +E+ + Q+ AYG D+K +S+ L E+ SK+ R+ ++ Sbjct: 180 ELAKQGYREVTFLGQNVDAYGKDLKD----------GSSLAKLLEEASKIEGIERIWFLT 229 Query: 239 -YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D++I ++A K+ + +P+Q S RILKLM R + + LA +++ R P Sbjct: 230 SYPTDFSDELIEVIARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVP 289 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVPEEV 355 ++ + S IVGFP ETEEDF +D +++A+ +R+ YSP +G A D+VP E Sbjct: 290 DVAISSDIIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKGTVAWKHYKDEVPYEE 349 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNG 414 K R M LQ++I+ + + G+ + VI++ + G GR +I + Sbjct: 350 KVRRMQFLMNLQKRINRKLNERYKGKTVRVIVEAQAKNGLFYGR------DIRNKIIAFE 403 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 G VK+E L+G V Sbjct: 404 GEEWMIGRFADVKIEKITAGPLYGKVV 430 >UniRef50_A9A0B5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RIMO_DESOH Length = 440 Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 157/451 (34%), Positives = 232/451 (51%), Gaps = 30/451 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ SLGC KN VDSE +L EG V AD+++VNTC FI+ AV E+++ I Sbjct: 1 MKVHLTSLGCAKNQVDSELMLGAFAAEGLTVCDDPAGADVLVVNTCAFIEDAVNEAVDTI 60 Query: 68 GEALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHH------ 115 ++IV GCL + +++ P+ G +Y +V+E V Sbjct: 61 LALARYKSEGSCRRLIVCGCLPERFGEELAGALPEADFFFGTGAYHRVIEAVAGKESTLS 120 Query: 116 --YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 +P P P + + H Y+KI+EGC+ RCT+CIIP +RG SRP + Sbjct: 121 RCTLPPPDAVPMQAAADRRICAT--PHTVYVKIAEGCDRRCTYCIIPRLRGRQRSRPPAD 178 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GI 231 ++ EA+ LV AG KE+++++Q+T+AYG D+ S+ SL LS I Sbjct: 179 IVVEARGLVAAGAKELVLVAQETTAYGADLSP----------PVSLASLLMALSDAVGDI 228 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W R+ Y++P D+I +M E + Y D+P+QHAS R+LK M R + Sbjct: 229 WVRVLYMHPDTMDPDLIRVMTERDNLCSYFDVPVQHASDRVLKRMGRRHTAADLHRLFDD 288 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R P+ LR+T +VGFPGE DF+ LLDF+ D +G F YS E ++ L Sbjct: 289 IRRADPDAVLRTTVLVGFPGEKPADFEKLLDFITGVAFDHLGAFIYSDDEALSSHGLDGH 348 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGA 409 V + R++R M Q IS+ RL ++VG V+++E E+G GR+ APE+DG Sbjct: 349 VSSKTARHRYDRVMTAQIDISSRRLAKRVGSREPVLVEEKAEDGLFFGRAWFQAPEVDGD 408 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V +G + PGD + V++ A YDL G Sbjct: 409 VCFSGAGDYAPGDRVSVRITGASAYDLTGEA 439 >UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=8 Tax=Deinococci RepID=MIAB_THET2 Length = 465 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 130/444 (29%), Positives = 207/444 (46%), Gaps = 27/444 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + ++ GC N DS + +EL + G+++V S ++AD V+VNTC V++ + Sbjct: 26 MRAHIITYGCQMNEYDSHLVASELVSLGWELVDSVEEADFVLVNTCAVRGKPVEKVRSLL 85 Query: 68 GEALNENGK----VIVTGCLGAKED--QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G+ E + + + GCL ++ Q+ + V + GP + + E + Sbjct: 86 GQLRKEKERRGLLIGMMGCLAQLDEGQQMAKKF-GVDVLLGPGALTSLPEALKANERFFD 144 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 ++ A++ I GCNH CT+CI+P+ RG VSR +L E + L Sbjct: 145 LTFREDVLDYIPPPPKGALSAHVTIIRGCNHHCTYCIVPTTRGPEVSRHPDLILKEIELL 204 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYVYP 240 AGV E+ ++ Q+ ++YG D +P S L + +GI R +P Sbjct: 205 KQAGVVEVTLLGQNVNSYGKD----------QPGFPSFAELLRMVGGMGIPRVRFLTSHP 254 Query: 241 YPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 DD+I +AE I Y+ +P+Q S R+L+ M R L RI++ RE P+ Sbjct: 255 VNFTDDIIEAIAETPAICRYIHLPVQSGSDRVLRRMAREYRRAHYLERIRKIREALPDAV 314 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 L + IVGFPGETEEDFQ L E D+ F YSP G A +P EVK ER Sbjct: 315 LSTDIIVGFPGETEEDFQETLSLYDEVGYDQAYMFIYSPRPGTPAYKHFQDLPREVKVER 374 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPEIDGAVYLNGETN 417 R ++ Q++ S R E VG+ + V++ +E G + P V + Sbjct: 375 LMRLIEKQKEWSYRRNLEWVGKTVEVLVRGEAKEEGFVQGHDRGNHP-----VLVPASQA 429 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 PG + +V+++ A + L+G V Sbjct: 430 PVPG-LYQVEIKQATPHLLFGEVV 452 >UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG09_SEBTE Length = 445 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 121/452 (26%), Positives = 212/452 (46%), Gaps = 32/452 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + K ++ GC N+ +S ++ L++ GY +V +D+V++NTC + A + Sbjct: 9 EKKATIITYGCQMNVNESAKMKKMLQSIGYKIVDDIKISDLVLLNTCTVREGAAVKVYGK 68 Query: 67 IGEALN-----ENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +GE N + VTGCL + ++ + P V + G + ++ + + Sbjct: 69 LGELKKLKEKRNNMIIGVTGCLAQEVREEFIKRTPFVDLVIGNQNIAKLPDIIEKIQKGT 128 Query: 121 -KHNPFLSLVPEQGVKLT----PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 H + E ++ A + I+ GCN+ CTFCI+P +RG S P+ E+L Sbjct: 129 VDHIVMVEDEDELPKRVDADFGDDIVASVSITYGCNNYCTFCIVPYVRGMERSVPMREIL 188 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 + K+ D G KEIL + Q+ ++YG D + L + + + L Sbjct: 189 DDVKQYADKGYKEILFLGQNVNSYGSDRIE---------MGEDFAGLLTKAANIEGDFWL 239 Query: 236 HYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 Y+ P+P D VI +AE K+ L +PLQ S +IL M R + + + + + Sbjct: 240 KYISPHPKDFTDSVIKAIAENPKVARMLHLPLQSGSTKILGAMNRGYTKEEFIELALKIK 299 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P++ + + IVGFPGET+EDFQ LD +++ + F YS G A L +QVP Sbjct: 300 KEIPDIGITTDIIVGFPGETDEDFQDTLDVVEQVGFENAFMFMYSKRSGTPAAVLEEQVP 359 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDGA 409 E+VK+ER + M+LQ + E ++ G+ + V+++ + + GR+ Sbjct: 360 EQVKKERLQQLMRLQNARAKEESKKYYGQTLKVLVEGPSSKNPDMLTGRTSTHK-----I 414 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V G+ + G + VK+ + L+G V Sbjct: 415 VLFKGDEELS-GKFVNVKIYETKTWTLYGELV 445 >UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L7_9BACT Length = 434 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 172/444 (38%), Positives = 248/444 (55%), Gaps = 21/444 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + +SLGCPKN VDSE + L G+ +V S ++AD+ +VNTCGF+ +AV+E ++ Sbjct: 1 MKNLHIISLGCPKNAVDSEHLGGVLEAAGFRLVGSAEEADVALVNTCGFLQAAVEEGIQV 60 Query: 67 IGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I + ++ V GC+ + D+++ P V + +L + VP Sbjct: 61 ILDLERLKKAGVVRQIAVVGCMLNRYGDELKAEFPTVDFWAKSEDWGALLREMGRGVPAA 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + L + TP YLKISEGCN RC++C IP +RG L S P+ +++ EA+R Sbjct: 121 AESGCL----RADLAGTPWTR-YLKISEGCNSRCSYCAIPGIRGRLRSVPVEQIVGEARR 175 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 LVD G KE+ ++ Q+ S YG D+ G P ++ E+ G+W RL Y++P Sbjct: 176 LVDEGAKELCLVGQELSIYGSDL-------FGRPSLPRLLDELEKELPRGVWLRLFYLHP 228 Query: 241 YPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 + + A ILP+LDIP+QH +L+ M RP + REI P+ Sbjct: 229 SLVDAVFLERVAASPVILPWLDIPIQHVDDDVLRRMNRPPVERHIRELFARGREINPDFA 288 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 R+T +VGFPGET F LLDF++E DR+G F YSP +G A + PDQ+PEE K R Sbjct: 289 FRTTLMVGFPGETRAQFDKLLDFVEEIGFDRLGAFPYSPEDGTPAASFPDQIPEEEKTAR 348 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYLNGETN 417 +N M+LQ+Q+S R VG E+ V+IDEVDEE +GRS DAPEIDG V + G Sbjct: 349 YNELMELQRQVSLTRQAHFVGHELNVLIDEVDEETGERVGRSFRDAPEIDGVVTVTGAGR 408 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 +PGD++RVK+ + EYDL G + Sbjct: 409 ARPGDMIRVKITASSEYDLSGEAI 432 >UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fusobacteriaceae RepID=C7NCD8_LEPBD Length = 441 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 121/453 (26%), Positives = 212/453 (46%), Gaps = 32/453 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES--- 63 + + ++ GC N+ +S ++ L+T GY++ ++ D+V +NTC + A + Sbjct: 2 EKRATIITYGCQMNVNESAKMKQMLQTMGYNMTEDIENTDLVFLNTCTVREGAAVKVYGK 61 Query: 64 ---LEAIGEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 L+ I E + + VTGCL + D+ + P V + G + ++ + + Sbjct: 62 LGDLKRIKEEKDGKMIIGVTGCLAQEVRDEFIKKTPYVDLVLGNQNIGRIPDILERIESG 121 Query: 120 PKHNPFLSLVPEQ-----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + ++ A + I+ GCN+ CTFCI+P +RG S P+ E+ Sbjct: 122 EDTHIVMVDDEDELPTRVDADFGDDIVASISITYGCNNYCTFCIVPYVRGMERSVPLNEI 181 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + + ++ G KEIL + Q+ ++YG D + + L EQ + + Sbjct: 182 IRDVEQYTKKGYKEILFLGQNVNSYGSDFANGQD---------NFAELLEQSANVEGDFW 232 Query: 235 LHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + YV P+P D+VI ++A KI L +PLQ S +IL M R + + +A K+ Sbjct: 233 IKYVSPHPKDFSDEVIDVIARNPKIARMLHLPLQSGSTKILDSMNRGYTKEEFIALAKKI 292 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +E P++ L + IVGFPGET+EDFQ +D + E + F YS G A + +QV Sbjct: 293 KEKIPDIGLTTDIIVGFPGETDEDFQDTMDVVNEVGFENAFMFMYSKRTGTPAATMEEQV 352 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDG 408 E+ K ER + M+LQ + E Q+ +G+ + V+++ + E GRS Sbjct: 353 DEQTKNERLQQLMRLQNMKAKEESQKYLGQTVKVLVEGPSRKNPEMLTGRSSTHK----- 407 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + G + VK+ A + L+G V Sbjct: 408 IILFKSDRKDLKGQFVNVKIYDAKTWTLYGEMV 440 >UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bacteria RepID=YQEV_BACSU Length = 451 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 131/432 (30%), Positives = 213/432 (49%), Gaps = 19/432 (4%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + F +LGC N ++E I + GY+ AD+ ++NTC ++ ++S + I Sbjct: 4 VAFHTLGCKVNHYETEAIWQLFKEAGYERRDFEQTADVYVINTCTVTNTGDKKSRQVIRR 63 Query: 70 ALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 A+ +N G + VTGC P V + G E++L ++ Y + + +S Sbjct: 64 AIRQNPDGVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIDQYREERQPINGVS 123 Query: 128 LVPEQGV-------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + + V T R A LKI EGCN+ CTFCIIP RG L SR EV+ +A++ Sbjct: 124 NIMKARVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLLRSRDPEEVIKQAQQ 183 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 LVDAG KEI++ T YG D+K +N + + + + E + ++ R+ + Sbjct: 184 LVDAGYKEIVLTGIHTGGYGEDMKD----YNFAKLLSELDTRVEGVKRI----RISSIEA 235 Query: 241 YPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D+VI ++ KI+ +L IP+Q S +LK M+R +++ R+ + ++ P L Sbjct: 236 SQITDEVIEVLDRSDKIVNHLHIPIQSGSNTVLKRMRRKYTMEFFADRLNKLKKALPGLA 295 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 + S IVGFPGETEE+F +F+KE + + F YS G A + DQV E VK ER Sbjct: 296 VTSDVIVGFPGETEEEFMETYNFIKEHKFSELHVFPYSKRTGTPAARMEDQVDENVKNER 355 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVK 419 +R + L Q++ E + + +I +E +E + V G ++ Sbjct: 356 VHRLIALSDQLAKEYASQYENEVLEIIPEEAFKETEEENMFVGYTDNYMKVVFKGTEDM- 414 Query: 420 PGDILRVKVEHA 431 G I++VK+ A Sbjct: 415 IGKIVKVKILKA 426 >UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Bacteria RepID=RIMO_DESAP Length = 450 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 176/446 (39%), Positives = 246/446 (55%), Gaps = 25/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 +I VSLGC KN VD E +L L GY + + AD+++VNTC FI A QES+EAI Sbjct: 11 RIALVSLGCDKNRVDGEVMLGLLERAGYQITAELE-ADIILVNTCAFIQDAKQESIEAIL 69 Query: 69 EALNENG-----KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E G ++ TGCL + D++ P++ + G +V++ V + Sbjct: 70 ETARYRGNGRCRVLLATGCLAQRYPDELLRDIPELDGVVGTGEVGRVVDIVRRAATGERV 129 Query: 123 NP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 FL V AYLKISEGC++RC +C+IP +RG SR ++ E Sbjct: 130 REVGPPGFLGREVLPRVPSGSPFTAYLKISEGCDNRCLYCVIPQLRGPYRSREASVLVRE 189 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A+ L G +EI++++QDT+ YG D+K R TS+ L +L+ L W RL Sbjct: 190 ARALAARGAREIVLVAQDTTRYGSDLKER----------TSLTDLVSRLAALEGVAWIRL 239 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP +++ LMA E ++ YLDIPLQHAS R+L+ M R I R Sbjct: 240 LYCYPSGITFELVELMAREPRLCRYLDIPLQHASDRVLRRMGRSTMSYDLRKLILFLRSA 299 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P LT+RSTF+VGFPGETE DF+ LL FLK +LDR G F YS EG A +PDQVP E Sbjct: 300 IPGLTIRSTFMVGFPGETEADFEELLGFLKAMKLDRAGFFAYSREEGTPAARMPDQVPPE 359 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 VK ER R +Q+++S + +VG E+ V+++ E GRS ADAP+IDG V+L+ Sbjct: 360 VKRERLERAAAVQREVSRALNRARVGSEVTVLVEGRKGEQYYGRSEADAPDIDGRVFLSA 419 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 ++++PG +R ++ A YDL Sbjct: 420 ASDLEPGTFVRARITGAGPYDLRARV 445 >UniRef50_Q6MBU9 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Chlamydiales RepID=RIMO_PARUW Length = 475 Score = 439 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 164/447 (36%), Positives = 265/447 (59%), Gaps = 22/447 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F+SLGCP+NLVDSE +L L GY+V P+ ++AD +++NTCGF++++ QES++ + Sbjct: 37 KINFISLGCPRNLVDSEVMLGILLKAGYEVAPTLEEADYLVINTCGFLEASRQESMDTVE 96 Query: 69 EA---LNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP---K 121 E + K+IVTGC+ D ++ P + + G E +L+ V Sbjct: 97 EVLSQRKKTAKLIVTGCMVQTHSDALKTTFPSIDYLLGSGDVEGILKAVQSTQKGQIISS 156 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 +L TP+HYAYLKI+EGC RC +C+IP+++G L S+ ++L E L Sbjct: 157 ARSYLEAGEVPRRLSTPKHYAYLKIAEGCRKRCAYCVIPTIKGPLKSKGKEQILKEFNLL 216 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVY 239 + GVKE+++I+QD YG D G T++++L + + ++ W RL Y+Y Sbjct: 217 LSQGVKEVILIAQDLGDYGKD--------QGAKKLTALLNLLQSMLEIKQAFWLRLLYLY 268 Query: 240 PYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D++I LM + +I PYLD+P+QH + +ILK M+R S + + I + R P + Sbjct: 269 PDEITDELIALMKSDSRICPYLDMPIQHVNNQILKSMRRATSKEDIIEIITKLRREIPNV 328 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 +R++ IVGFPGETEE FQ L+ F+++ L+ VG FK+S G+ A LP+Q+ +E+KE+ Sbjct: 329 AIRTSLIVGFPGETEEQFQELIQFVQDYPLENVGIFKFSREPGSHAYDLPNQISDEMKED 388 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNGE 415 R++R MQ+Q+++ + L++ +G++I V+++ E IGR P+IDG V +N Sbjct: 389 RYHRLMQVQKKVVKKNLKKMIGKKIAVVVEGYHPETELLMIGRHTGQCPDIDGQVLINDG 448 Query: 416 TNVKP-GDILRVKVEHADEYDLWGSRV 441 VK G+I V++ +YDL G + Sbjct: 449 RKVKAFGEIYTVEITDVADYDLVGHVI 475 >UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESPS Length = 447 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 135/454 (29%), Positives = 208/454 (45%), Gaps = 28/454 (6%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 Q + GC NL DSE I L GY AD+V++NTC A Q+ + Sbjct: 2 EQRSFFIKTYGCQMNLRDSEIIAQILNNNGYVETSEIGGADLVLLNTCSIRAKAEQKVMS 61 Query: 66 AIGEALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 +GE + V GC+ +E QI+ P V + G + E + + Sbjct: 62 KLGELRRNKKINPRMQICVAGCVAQQEGKQIQAKMPHVDLVIGTQYIYAINELLERSRTE 121 Query: 120 --------PKHNPFLSLVPEQ-GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 +PE G + ++ I +GCN+ CT+C++P RG VSR Sbjct: 122 GPITATNLDDKYVIPQFIPETTGKEHEGEFRKFVTIMQGCNNFCTYCVVPYTRGREVSRS 181 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +++ E LV +G+KEI ++ Q+ ++Y +T + + L Q++ + Sbjct: 182 IKDIVEEITVLVKSGIKEITLLGQNVNSY-----AQTNTVTEDDTPATFSDLLRQVAAVE 236 Query: 231 IWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL + P +D++ + + P +P+Q S ++LK M R +V+ L Sbjct: 237 GLKRLRFTTSNPKDLSNDLMQCFKDLDVLCPQFHLPVQAGSNKVLKEMGRKYTVESYLDL 296 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + Q RE CPE+ + + IVGFPGET+E+F+ + L+ R FKYS G AN L Sbjct: 297 VTQLRENCPEIAITTDIIVGFPGETDEEFEETMKMLETVRYHGSFSFKYSDRPGTKANEL 356 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 ++V E VK R RF Q +I ER QE +G V+I+E+ + GR + Sbjct: 357 TNKVDESVKSARLARFQARQDEIGLERNQEYIGTTQEVLIEELRDGEIKGRMGTN----- 411 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V+ G TN KPGD L V A ++ L GS V Sbjct: 412 HIVHAIGLTNKKPGDFLMAHVTAAGQHSLRGSIV 445 >UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA6_9FIRM Length = 451 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 161/459 (35%), Positives = 245/459 (53%), Gaps = 36/459 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI +LGCPKN DSE + G+ S DAD+V+VNTCGFI A ES++AI Sbjct: 1 MKIFIETLGCPKNFNDSEYAYGSFFSAGFKKADSISDADVVVVNTCGFIHDAKVESIDAI 60 Query: 68 ---GEALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH- 122 + + ++V+GCL + +++++ P+V G + Y + E + K Sbjct: 61 FDAAQKKKSSAILVVSGCLSQRYMEELKKEMPEVDIFAGVNDYFNLPEICKKRLNDGKSK 120 Query: 123 NPFLSLVPEQGVKLTPRHYAY---------LKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 L+ P++ P A+ +KISEGCN++C FCIIPS+RG SR I + Sbjct: 121 GAVLTKSPQKNDFPEPGSRAFENVNNNSYTIKISEGCNNKCAFCIIPSIRGSFRSRYIQD 180 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 ++ EA+ LV G KEI++I QD +A+G D ++ + ++ L ++SK+ Sbjct: 181 IVKEAEFLVTLGAKEIILIGQDVTAFGTDRRN----------EDTLALLLREVSKIEGEF 230 Query: 232 WTRLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W RL Y Y D++I +M K+ Y+D+P+QH S +L M+R D + RI+ Sbjct: 231 WIRLMYCYDNKITDELIAEIMRNKKVCKYIDMPIQHISDNVLSAMRRGSDSDLIIERIRA 290 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R ++ +R+T I GFPGE+EEDF L +F+KE DR+G F YS EG A Q Sbjct: 291 LRSNIDDIHIRTTLITGFPGESEEDFNKLYEFVKEQEFDRLGVFSYSEEEGTAAAKCK-Q 349 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-------DEEGAIGRSMADA 403 +P+E++E+R + M+LQ +IS + + VG+ + V+ID V E IGR+ DA Sbjct: 350 IPDEIREQRRDSIMRLQSEISKNKNKMMVGKTMKVLIDGVIEGEQSGSERMLIGRTEFDA 409 Query: 404 PEIDGAVYLNGETNVK-PGDILRVKVEHADEYDLWGSRV 441 PEID V K G+ V + + EYD++G V Sbjct: 410 PEIDNCVIFKPAICGKDVGEFTYVHITGSSEYDVYGEEV 448 >UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP71_9BACT Length = 461 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 122/461 (26%), Positives = 213/461 (46%), Gaps = 36/461 (7%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + ++ + GC N DSE++ + LR GY +V + DAD+V++NTC D A Q+++ Sbjct: 7 STMNRVYIKTYGCQMNERDSEQVASSLRDRGYSIVDTEYDADVVLLNTCSVRDQAEQKAI 66 Query: 65 EAIGEALNENG-----KVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 G + V GC+ + ++ + P + + G + +V +H+ + + Sbjct: 67 GKAGYLKKHKKDNPNFLIGVMGCMAQNRGAELFDRLPDLDLVVGTQKFHRVPDHLDNMIQ 126 Query: 119 -----KPKHNPFLSLVPEQGVKLTPRHY--------AYLKISEGCNHRCTFCIIPSMRGD 165 P+ + L L E G + T R + A++ I +GCN C FCI+P RG Sbjct: 127 SMNGQGPRPSSVLDLGEEAGSQNTIRDHIGKKGQVQAFVSIMQGCNMNCAFCIVPKTRGR 186 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 +RPI E++ E L ++GVKEI ++ Q ++YG K+ V L E+ Sbjct: 187 ERARPIQEIVDEVIGLAESGVKEITLLGQIVTSYGR------RDFPVVNGKSPFVQLLEK 240 Query: 226 LSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVD 282 + ++ R+ + P+P D++ + K+ Y+ +PLQ + L+ M RP + + Sbjct: 241 IEEIPGIERIRFTSPHPRGFKQDLVEAYRDLSKLCEYVHLPLQAGCNKTLRAMNRPYTKE 300 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 R + R + P + + IVGFPGETE DF + D FKYS G Sbjct: 301 RYREIVDSLRAMVPSMYFSTDIIVGFPGETEADFNETAAMFDDIAFDMAYIFKYSIRTGT 360 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSM 400 A +PDQ+P+E KE R + L + S R + VG V+++ ++G +G + Sbjct: 361 PAETMPDQIPQEEKERRNQVLLDLLHKHSLARNEGLVGTTEQVLVEGPAKKGDKYVGHTR 420 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 I + + G ++ +K++ A ++G V Sbjct: 421 GWRNAI-----FDANERL-VGQLVDLKIDRATASTVYGDLV 455 >UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillonella RepID=D1BMG0_VEIPT Length = 431 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 121/444 (27%), Positives = 207/444 (46%), Gaps = 28/444 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + F +LGC N D++ + Y+ V + AD+ ++NTC + ++S + Sbjct: 1 MKTVAFTTLGCRVNQYDTDAMKGLFLQNNYEAVDFDEKADIYVINTCSVTNMGEKKSRQL 60 Query: 67 IGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH-N 123 I +A +N VIVTGC + V + G ++ +++E V + N Sbjct: 61 IRKAKRQNEDAYVIVTGCYAQLDPDAIAAIDGVNLVIGTNNRSKIVELVEQLESTERQIN 120 Query: 124 PFLSLVPEQGVKLTP-------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 ++ E + P + A++KI EGCN+ C FCIIP RG L SR + +++ Sbjct: 121 AVRDIMKESNFEEMPLFGNESDKTRAFMKIQEGCNNYCAFCIIPYTRGKLKSRKVDDIVQ 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTR 234 EAKRLVD G EI++ YGV++ P + ++ + + L ++ R Sbjct: 181 EAKRLVDHGFHEIVLTGIHLGNYGVEL----------PGRPTLADVVKALLEIPNLYRIR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + D+++ LMA ++ P+L +PLQ S +LKLMKR ++ I R Sbjct: 231 FGSIESVEVSDELVELMATNKRVCPHLHLPLQAGSDHVLKLMKRHYTLQEYKDLITSLRS 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 +L++ + I GFP ET+EDF+ L+ ++E + F YS EG A + DQVPE Sbjct: 291 RIKDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHIHAFPYSIREGTPAATMADQVPE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 VK+ R L Q + ++G+ ++I++ + +G + I+G V Sbjct: 351 AVKKTRVALLNGLSQSGYERYAKSRIGKPGEILIEKEENGYYMGLTNEY---INGKV--K 405 Query: 414 GETNVKPGDILRVKVEHADEYDLW 437 + K GD++ V ++ L Sbjct: 406 SDGTRKIGDLVGGTVVGLEDNYLI 429 >UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKJ7_CALS8 Length = 434 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 126/448 (28%), Positives = 219/448 (48%), Gaps = 29/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI F +LGC N +++ I GY++V +AD+ ++NTC + + ++S +AI Sbjct: 1 MKIAFYTLGCKVNQYETQAIAETFERLGYEIVDFDQEADIYVINTCTVTNVSDRKSRQAI 60 Query: 68 GEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 A + V+V GC Q + V I G E+++E+V Y+ + K Sbjct: 61 KRAKKTSPDSIVVVMGCYPQVYPQEVQKIEGVDIIVGTRDREKIVEYVTEYLKQKKKILA 120 Query: 126 LSLVPEQG-------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ ++ R A++KI EGC C++CIIP RG +VSR + +L E Sbjct: 121 VNNEYKRDTFEELKISSFNERTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSLSSILDEV 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLH 236 +RL G KE ++ + SAYG D+ + K ++V + E++SK+ RL Sbjct: 181 QRLASNGYKEFVITGINISAYGKDLDY----------KVTLVDVIEEISKIEKVRRIRLS 230 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P +D I + + K+ +L + LQ S +ILKLM R + D ++ R Sbjct: 231 SLEPIVMKEDFIKRLVKIEKLCHHLHLSLQSGSDKILKLMNRHYTTDEYRQIVEMVRGYW 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 ++ + IVGFPGE++EDF+ ++F+KE R+ F++SP +G +A +P QV Sbjct: 291 NDVAFTTDIIVGFPGESDEDFERTVEFVKEIGFSRIHVFRFSPKKGTNAYNMPYQVNSAE 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAVYLN 413 KE+R + +++S ++ G+ + V+I+E E G S + Sbjct: 351 KEKRSEILKSVARKLSFGFHKKFEGKIVDVLIEENSSLEGYFEGYSGNYI-----RTLVP 405 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 +++ G+I +VKV+ A E + G + Sbjct: 406 KTESIRVGEIYKVKVKEAFEQYVIGDII 433 >UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDC7_9FIRM Length = 433 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 153/443 (34%), Positives = 245/443 (55%), Gaps = 20/443 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+GFVSLGC KNLVDSE+++ L + +++V A+ +I+NTCGFI+SA +E++ I Sbjct: 1 MKVGFVSLGCSKNLVDSEKMMGMLVSGQHELVSDPAQAEAIIINTCGFINSAKEEAIATI 60 Query: 68 GEA----LNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + ++ ++IV GCL + + + E P++ + Y + E + + + Sbjct: 61 FKMAEYKKDKCKRLIVVGCLAQRYKETLEEEIPEIDAVISIREYPHLHEILKELLDEHDL 120 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + + + AYLKI+EGC++RCT+C IP +RGD VS P+ +++ EAK+L Sbjct: 121 VSYDKCERKVSSR---PWTAYLKIAEGCSNRCTYCAIPLIRGDNVSFPMEDLVKEAKQLA 177 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 GVKE+++I+QDT+ YG+D + + W R+ Y+YP Sbjct: 178 QRGVKELVLIAQDTTKYGLDRYGKLSLLELLKQLHEIEGF--------HWIRILYMYPDE 229 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++I MA K+LPY DIP+QHA+ R+LK M R G+ + L ++ R TLR Sbjct: 230 IEDELIEGMARLPKVLPYFDIPMQHANNRMLKAMNRRGTKEEVLRLCEKIRNTFENPTLR 289 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 +TFIVGFP ET + F L++F+ + DR+G F YSP E A + V EE K+ R Sbjct: 290 TTFIVGFPSETHDHFNELMEFVNDVHWDRMGAFPYSPEEDTPAFDMEQDVSEEEKQRRLE 349 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAP-EIDGAVYLNGETNV 418 + M Q++IS + Q+ +G+ I V++++ + GR + AP E+DG V + + Sbjct: 350 QLMLRQEEISLQNQQKMIGQVIEVLVEDQEGLSGLYRGRGKSSAPDEVDGIVIFKSDRFI 409 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 G ++V+V A +DL G V Sbjct: 410 PYGSFVKVRVTEAFPHDLKGVEV 432 >UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MIAB_SYNFM Length = 456 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 122/460 (26%), Positives = 200/460 (43%), Gaps = 36/460 (7%) Query: 1 MSKVTPQPKI-GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 ++K P P+ + GC N DS+R L L GY DAD++ +NTC D A Sbjct: 5 LAKTAPAPRYLYVRTFGCQMNEYDSQRALRLLCAVGYRPTSDIADADVIFLNTCSVRDKA 64 Query: 60 VQESLEAIGEALNENG-----KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV 113 Q+ +G K++V GC+ + D + + V + G + + Sbjct: 65 EQKVYSFLGRLRRLKAHRPWLKIVVAGCVAQQLGDGLLKRFEHVDLVVGTRGIGSIASLL 124 Query: 114 HHYVPKPKHNPFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + L QG T A + I +GCN+ CT+CI+P +RG Sbjct: 125 EEVERSKRRVAHLPAEELQGFTTDKCRTVGTGDVVAQVTIMQGCNNFCTYCIVPHVRGRE 184 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 SR ++L E L G +E+L++ Q+ ++YG G P S L ++ Sbjct: 185 RSRAPDDILREIDFLASRGAREVLLLGQNVNSYGR----------GLPDPISFPDLLRRI 234 Query: 227 SKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 K R+ + +P +D+I A + +L +P Q S ILKLM R + + Sbjct: 235 GKETSIRRVRFTTSHPKDLTEDLIECFAGLPFLCKHLHLPFQSGSDGILKLMHRGYTARQ 294 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 L +I + RE+CPE+ L + IVGFP E+EED+ L ++E R D + F+YS Sbjct: 295 YLEKIARLREVCPEIALSTDVIVGFPAESEEDYLQTLRLIEEVRFDSLFSFRYSDRPLTR 354 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSM 400 A PD+VP +VK R R +Q I+ ++ + G V+++ + GR+ Sbjct: 355 AAGFPDKVPMDVKVRRLARLQSIQADITLQKNLAETGTVREVLVEGPSKASNGQMTGRTQ 414 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + ++ G I+ V++ A + L G Sbjct: 415 QNR-----IINFQCPVDL-TGKIVPVRIVAAYSHSLKGEL 448 >UniRef50_B2KB59 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Elusimicrobium minutum Pei191 RepID=RIMO_ELUMP Length = 430 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 153/440 (34%), Positives = 237/440 (53%), Gaps = 19/440 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI +SLGC KNL D+E +L L + + +V +AD +++NTC FI A +E+ I Sbjct: 3 KIFTISLGCSKNLTDTEEMLGILNHKKHYLVADESEADTILINTCAFIKPAREEADREIK 62 Query: 69 EALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 A K+IV GCL KE + + +P V G E++ + Sbjct: 63 RASKLKAQGKIEKLIVAGCLTQKEGKSLPSKYPLVDAFIGLKGIEKIDNVIKRPKHSFCP 122 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 P P+ ++LT H AYLK+++GCN+RC +C IP++RG S+ + ++++EAK + Sbjct: 123 APDYIKAPDFKLQLTAPHSAYLKVADGCNNRCAYCTIPAIRGPFRSKSMEDIVAEAKAME 182 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 GVKEI +I+QDT+AYG D+ + + + W R+ Y YP Sbjct: 183 KNGVKEISLIAQDTTAYGQDIFGKPSLVKLLKKLVKIKGI--------EWFRIMYAYPET 234 Query: 243 HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++ +A E KI YLD+PLQH S +LK M R + D A+IK R+I P ++LR Sbjct: 235 VTKDLLDFIACEPKICRYLDMPLQHISAPVLKAMNRRSTEDEVRAKIKLIRQIVPGMSLR 294 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + FI GFPGET EDF+ L F+ EA+ + VG F YS +G A + QV E++K++R Sbjct: 295 TNFIAGFPGETAEDFEKLKKFIAEAKFNNVGVFAYSKEDGTPAAVMKRQVAEKIKKQRVE 354 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 + Q ++ ++ G+ + V++D + GRS +D+P+IDG V + G K G Sbjct: 355 ELVSAQSRVIDSINRKLKGKTVKVLLDNL----FCGRSESDSPDIDGRVEVKGNKKYKAG 410 Query: 422 DILRVKVEHADEYDLWGSRV 441 D ++VK+ A Y+ G + Sbjct: 411 DFVKVKITSAKGYNRTGKII 430 >UniRef50_B0P6Q6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6Q6_9FIRM Length = 441 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 156/445 (35%), Positives = 242/445 (54%), Gaps = 23/445 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G VSLGC KN VD+ER+L ++ GY++ D+VI+NTCGFI+ A +ES+E I Sbjct: 4 KVGMVSLGCSKNQVDAERLLAQIEKGGYEICTDASQCDVVIINTCGFIEDAKRESIETIL 63 Query: 69 EALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E ++VTGCL + +Q+ P+ + G +L + + K Sbjct: 64 EFAQLKTGGALRALVVTGCLAERYREQVAAEIPEADVVLGIGCNADILGAIERALHGEKT 123 Query: 123 NPFLSL----VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F + + V ++AYLK++EGC++RC++C IP +RG SRP+ +++EA Sbjct: 124 VAFGEKEALSLEGERVLANEPYFAYLKVAEGCDNRCSYCAIPLIRGPFRSRPMENIVAEA 183 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 +RL GV E+ V++QDT+ YG D+ R ++ L E+L +L W R+ Sbjct: 184 QRLAACGVTELNVVAQDTTRYGEDLYGRL----------ALPELLEKLCRLDGVRWVRML 233 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D ++ +MA E KI+ Y+DIP+QH + RIL LM R G A +++ R Sbjct: 234 YCYPDRITDRLLDVMAREEKIVKYMDIPIQHVNGRILSLMNRRGDAGSLTALMEKIRARV 293 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + LR+T I GFP ET+ +F+ L +F++ R +R+GCF YS E A + Q+ EE Sbjct: 294 PGVVLRTTLITGFPTETQGEFEELCEFVQRVRFERLGCFAYSAEEDTPAALMDGQLDEEE 353 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K R M+ Q + + ++GR + V ++ + GRS DAP+ID VY +G Sbjct: 354 KRRRAQIIMEQQYGVMEGFNRSQIGRRLTVAVEGREGRLWYGRSYMDAPDIDSRVYFSGH 413 Query: 416 TNVKPGDILRVKVEHADEYDLWGSR 440 PGD + V+++ + YDL G Sbjct: 414 GPYSPGDYIEVEIDGVEGYDLKGKA 438 >UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSA4_9FIRM Length = 437 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 161/449 (35%), Positives = 258/449 (57%), Gaps = 32/449 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + V+LGC KN VDS +++ L Y V AD++IVNTCGFID+A +ES++ I + Sbjct: 4 VKIVTLGCSKNEVDSSCMMSILDKNRYSVENDPQKADIIIVNTCGFIDAAKEESIDTILQ 63 Query: 70 ALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 K+I++GCL + +++ + P+ I G + Q+ + + + K Sbjct: 64 MAKYKETGSCKKMILSGCLAQRYPEELLKEIPEADGIIGTGNISQINDILDRSIDGEKVI 123 Query: 122 -----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 ++P+L + ++ V +T Y+KISEGCN+ C++CIIP +RG SR I ++ Sbjct: 124 KVDNINSPYLEGIKKEKVNITE----YVKISEGCNNNCSYCIIPKLRGKNRSRRIEDIYE 179 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTR 234 E L G +EI++I+Q+T+ YG+D+ R S+ L +++SK+ W R Sbjct: 180 EVSYLAKNGAREIILIAQNTTDYGIDLYGR----------YSLSKLIKEISKINDIKWIR 229 Query: 235 LHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y+YP D++I + K++ Y+DIPLQH S +LKLM R + I++ R+ Sbjct: 230 VLYLYPDHFTDELINEFINNDKLVKYVDIPLQHYSDHVLKLMDRHTDKEHIKNLIEKLRK 289 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 L +R+TFIVGFPGE+EEDF +L +F+ + D++G F YS E AN L +Q+ E Sbjct: 290 -IKGLVIRTTFIVGFPGESEEDFNILREFINTYKFDKLGVFTYSREESTKANNLNEQIDE 348 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYL 412 +VKE R + MQ Q +IS L++K+G+ + V+I+E E+ GRS D+P+IDG +Y+ Sbjct: 349 DVKEYRRDIIMQDQLKISERLLEDKIGQVLQVLIEEKIEDNLFAGRSYIDSPDIDGVIYV 408 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 N + N+ + VKV + EYDL G + Sbjct: 409 NSDKNLTINSFINVKVTSSMEYDLIGDAI 437 >UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavobacteriales RepID=C6WZM1_FLAB3 Length = 508 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 123/459 (26%), Positives = 201/459 (43%), Gaps = 29/459 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ S GC N DSE + + L +GY+ ++++AD++++NTC + A Q Sbjct: 47 SKKLFLESYGCQMNFSDSEIVASILSKQGYNTTLNHEEADLILLNTCSIREKAEQTVRMR 106 Query: 67 IGEALN-----ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + N N V V GC+ + + E V + GP +Y + + Sbjct: 107 LSQFKNLKKERPNLTVGVLGCMAERLKTKFLEEEQLVDLVVGPDAYRDLPNLLKETDSGR 166 Query: 121 KHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + E + P A++ I+ GC++ CTFC++P RG SR + Sbjct: 167 DAINVILSKDETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTRGRERSRDPHSI 226 Query: 175 LSEAKRLVDAGVKEILVISQDTSAY-----GVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 + E K L + G KEI ++ Q+ +Y G + + L E ++ Sbjct: 227 VEECKTLWENGYKEITLLGQNVDSYLWYGGGAKKDFKNASEMQQLTAIRFAQLLEMVAVA 286 Query: 230 --GIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 + R P+ DV +MA I Y+ +P+Q S RIL+ M R + L Sbjct: 287 VPEMRIRFSTSNPHDMTVDVFEVMAKHDNICKYVHLPVQSGSDRILEKMNRQHTRAEYLN 346 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN- 345 I + +EI PE++ I+GF GETEED Q+ L ++E D F YS G A+ Sbjct: 347 LINRAKEIVPEISFSQDMIIGFCGETEEDHQLTLSLMREVEYDYGYMFAYSERPGTPAHR 406 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMAD 402 + D VP +VK+ R + LQ ++S +R+Q GR V+I+ + GR+ + Sbjct: 407 KMEDDVPADVKQRRLAEVIALQGELSRKRMQGYAGRMHEVLIEGTSKKNQNQWKGRNSQN 466 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 A + + K GDI+ V V + L G+ V Sbjct: 467 A-----VCVFDKLEDQKLGDIVTVFVHGNTQGTLLGTTV 500 >UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA2 Length = 443 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 137/446 (30%), Positives = 211/446 (47%), Gaps = 26/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + GC N DSER+ L + GY P D AD+++ NTC ++A Sbjct: 1 MKRYHVTTFGCQMNEHDSERMKGMLESLGYREAPDADVADLILFNTCSIREAADSRFKAH 60 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV-HHYVPK 119 +G A + + V GC +D++ E P V GP ++ E + + Sbjct: 61 LGHAKRRKRERPEVVIGVGGCWAQSVKDEVFEQFPFVDVAFGPGQVHKLAEFLTSESLTA 120 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + F + K + +IS GCN C++CI+PS RG V RP+G ++++ + Sbjct: 121 QGYFEFEGFTGDLPEKRAREFQGWTQISVGCNMACSYCIVPSTRGRDVGRPLGVLVADVE 180 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 R+ GV E+ ++ Q+ +AYG D+ R + L + + R+ Y Sbjct: 181 RMASEGVTEVTLLGQNVNAYGRDLHRRGFPS------ATFADLLSAVDAIDGIRRIRYTS 234 Query: 240 PYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 P+P +DVI AE + ++ +PLQ S R+LK M+R S +R L R+ RE P Sbjct: 235 PHPQDMKEDVIRAHAELEALCEHVHLPLQSGSSRVLKAMRRTYSRERYLDRVALLREHVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++ + + IVGFPGET+EDF L +E D F YSP +A LPDQVP EVK Sbjct: 295 DVAITTDIIVGFPGETDEDFAQTLSLCEEVAYDGAFTFVYSPRRETEAATLPDQVPHEVK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDGAVYLN 413 ER +R +++ Q+ + ER Q VGR + V+++ D GRS + +N Sbjct: 355 VERMDRLVEVIQRRAKERAQRFVGRTVEVLVEGPSRTDPTRLRGRSRHNK-------VVN 407 Query: 414 GETNVKPGDILRVKVEHADEYDLWGS 439 +PGD + V VE A L G Sbjct: 408 FSGLAQPGDYVHVDVESATSQTLMGE 433 >UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=18 Tax=Clostridia RepID=MIAB_ALKMQ Length = 476 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 117/458 (25%), Positives = 211/458 (46%), Gaps = 35/458 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + K V+ GC N DSE++ L+ GY ++A+++I NTC ++A Sbjct: 33 ERTGKRKKHLTVTYGCQMNEHDSEKLAGILQNIGYIETNDKNEANLIIYNTCCVRENAEL 92 Query: 62 ESLEAIGEALNENGK-----VIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHV 113 + IG N + + V GC+ + +I+ + V + G H+ + E + Sbjct: 93 KVYGNIGSLKNLKKEKHDLTIAVCGCMMQQPHVVKEIKSKYRHVDLVFGTHNLHKFPELL 152 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + V+ P A++ I GCN+ CT+CI+P RG S Sbjct: 153 STSMESDNMIIDVWDKEGDIVEGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRERS 212 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 R + E++ E + L G KEI ++ Q+ ++YG ++ +T +L + L+K Sbjct: 213 REVQEIIDEVEELAKNGTKEITLLGQNVNSYGKTLEE----------ETDFGNLLKVLNK 262 Query: 229 LGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ ++ +P D +I M K+ +L +P Q S ILK M R + + L Sbjct: 263 IEGIERIRFMTSHPKDLSDSLISAMTVCTKVCAHLHLPFQAGSNDILKAMNRKYTKEAYL 322 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 +++ R P + L + IVGFPGETE+DF+ L+ +++AR + + YS + A Sbjct: 323 ELVEKVRSKVPNVALTTDIIVGFPGETEDDFKETLNVVEKARFNSAYTYLYSLRQETPAA 382 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMAD 402 + + VP++VK ER+NR ++ +IS E + + + + V+++ + +GR+ Sbjct: 383 KMENHVPDDVKHERFNRLIEAVNRISGEINKAYLNKVVEVLVEGTSKTDDAKLMGRTPQS 442 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V G G I+RVK+ + L G Sbjct: 443 K-----LVNFAGNKE-DIGQIVRVKITEPKTFSLNGEL 474 >UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=191 Tax=cellular organisms RepID=MIAB_BEII9 Length = 510 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 127/458 (27%), Positives = 210/458 (45%), Gaps = 39/458 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ S GC N+ D+ER+ L EGY + +DAD+VI+NTC + A ++ + Sbjct: 34 RKLFVKSYGCQMNVYDAERMADLLAPEGYAETSAPEDADLVILNTCHIREHAAEKVFSEL 93 Query: 68 GEALNENG---------KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY- 116 G+ K++V GC+ E ++I V + GP SY ++ + + Sbjct: 94 GKLRLLKAEQQAAGRPVKIVVAGCVAQAEGEEILRRQKAVDLVVGPQSYHRLPDLLRRVA 153 Query: 117 -------VPKPKHNPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVS 168 P + F LV Q K+ R A++ + EGC+ C+FC++P RG S Sbjct: 154 HTPGLVDTEFPAEDKFDHLVAPQPEKIAERGVGAFVTVQEGCDKFCSFCVVPYTRGAETS 213 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP+ +L+E + L+ +GV+E+ +I Q+ +AY GF S+ SL +++ Sbjct: 214 RPVEAILAEVETLIASGVREVTLIGQNVNAY-------HGFDAMTGAPASLASLMARVAA 266 Query: 229 LGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ Y +P+ +D+I + ++P+L +P+Q S +IL M R L Sbjct: 267 MPGLLRIRYTTSHPNDMGEDLIAAHRDIPALMPFLHLPVQSGSDKILAAMNRRHKAGDYL 326 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 I R P++ L S FIVGFPGETE DF+ L +++ FKYS G Sbjct: 327 ELIASIRAARPDIALSSDFIVGFPGETEADFEATLALIEQVGFASAFSFKYSQRPGTPGA 386 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD--- 402 PDQ+ E+VK +R R L ++ + +GR + V+ ++ GR Sbjct: 387 DRPDQIDEDVKAQRLARLQALLEEQRQAFNKAMIGRVLPVLFEKP------GRHPGQIAG 440 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 A+Y G+ + G + V++ A G Sbjct: 441 KTPYLQALYAEGDKAL-IGTVQPVEILEAGPNSFHGRL 477 >UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bacteroidales RepID=D1PVJ2_9BACT Length = 443 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 168/452 (37%), Positives = 252/452 (55%), Gaps = 27/452 (5%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYD--DADMVIVNTCGFIDSAVQES 63 + +I FV++GC KNLVD+E ++ + GY V ++ +VNTCGFID+A +ES Sbjct: 2 KKNQIDFVTMGCSKNLVDTEHLMRQFENLGYRCVHDPQRVQGEIAVVNTCGFIDAAKEES 61 Query: 64 LEAIGE---ALNEN--GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 + I E A NE ++ V GCL + +D++ + P+V G +++Q+L+ + Sbjct: 62 INTILEFAEAKNEGRLKRLYVMGCLSQRYQDELEKTIPEVDRFYGKFNFKQLLQDLGPSE 121 Query: 118 PKPKHNPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + ++ TPRHYAY+KI+EGC+ C +C IP M G SR + + Sbjct: 122 DPKDSDALFTQRRKELSAGRKLTTPRHYAYIKIAEGCDRHCAYCAIPLMTGRHTSRSMED 181 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 +L E K+LV GVKE +I Q+ + YGVD+ K + L +++ + Sbjct: 182 ILEEVKQLVAEGVKEFQIIEQELTYYGVDIDG----------KPRIAELISRMADIPGVK 231 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W RLHY YP +++ +M E + YLDI LQH S +L M R S L I++ Sbjct: 232 WIRLHYAYPNQFPLELLDVMREKPNVCKYLDIALQHISDHVLSRMLRHVSKAETLELIRK 291 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPD 349 R+ P +TLR+T +VGFPGETEEDFQ LLDF++E R +R+G F YS EG + D Sbjct: 292 IRQEVPGITLRTTLMVGFPGETEEDFQELLDFVREVRFERMGAFVYSEEEGTYSALHYED 351 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGA 409 VP EVK+ R + M +QQ ISAE K+G+ VIID + +GR+ A +PE+D Sbjct: 352 DVPAEVKQRRLDELMAVQQDISAEIQAAKIGKTFKVIIDRKEGNYYVGRTEASSPEVDPE 411 Query: 410 VYLN-GETNVKPGDILRVKVEHADEYDLWGSR 440 V + G+ N++ G VK+ +DE+DL+G Sbjct: 412 VLIPVGKRNLRTGCFYEVKITDSDEFDLYGEA 443 >UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO n=52 Tax=Bacteroidetes/Chlorobi group RepID=RIMO_GRAFK Length = 450 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 170/448 (37%), Positives = 263/448 (58%), Gaps = 29/448 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 +K + +I V+LGC KN+ DSE ++ +L+ DVV +D ++V++NTCGFID+A + Sbjct: 3 TKSLKKNRINVVTLGCSKNVYDSEILMGQLKANDKDVVH-EEDGNIVVINTCGFIDNAKE 61 Query: 62 ESLEAIGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 +S+ I E + + KV VTGCL + +++ P V + G +L + Sbjct: 62 QSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLSAL-- 119 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + + + TP++YAYLKI+EGC+ C+FC IP MRG S PI ++ Sbjct: 120 ------EADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENLV 173 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 +EA++L GVKE+++I+QD + YG+D+ K ++ L E L K+ W Sbjct: 174 TEAEKLAANGVKELILIAQDLTYYGLDLYK----------KRNLAELLENLVKVEGIEWI 223 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RLHY +P DV+ +M E K+ YLDIPLQH S +LK M+R + ++ +K++R Sbjct: 224 RLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFR 283 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + PE+ +R+T IVG+PGETEE +Q L +++KE R +R+GCF YS E A L D VP Sbjct: 284 KTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDVP 343 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +EVK+ER N M++Q QIS E Q+K+G V+ID + IGR+ D+P++D V + Sbjct: 344 QEVKQERANEIMEIQSQISWELNQQKIGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVLI 403 Query: 413 NGETN-VKPGDILRVKVEHADEYDLWGS 439 + T +K GD VK+ A ++DL+G Sbjct: 404 DATTVYLKTGDYYDVKIAEAADFDLYGE 431 >UniRef50_C0QIB5 2-methylthioadenine synthetase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QIB5_DESAH Length = 441 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 159/444 (35%), Positives = 241/444 (54%), Gaps = 17/444 (3%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 I SLGC +N VDSE +L L + G+ +V AD++IVNTCGFI +A E+++ I + Sbjct: 3 IFLESLGCCRNQVDSEVMLGRLASAGHGIVHDPSQADVIIVNTCGFISAASAEAVDTILD 62 Query: 70 AL-----NENGKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 +++VTGCL + D + P+V G + ++++ V Sbjct: 63 MAVYKRDGRCKRLVVTGCLPERFKHDDLGGELPEVDVFLGTGACDEIVRVVESTGSMVLV 122 Query: 123 NPFLSLVPEQ---GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 L+ + LT + A++KISEGC+ CT+CIIP +RG SR + V++E++ Sbjct: 123 PDVLARQMQGHPLPRCLTLDYLAHVKISEGCDRHCTYCIIPRLRGIQRSRGVDAVVTESE 182 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 LV GVKEI+++ ++TS YGVD+ G N + T++ + L +W RL Y + Sbjct: 183 LLVKNGVKEIVLVGENTSDYGVDL---DGEVNLAGLLTTLSQRIKALDP-DVWIRLLYTH 238 Query: 240 PYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P DVI ++A + Y D+P+QHAS RIL+ M R + + I R+ P+ Sbjct: 239 PSSLDFDVIRVIAGLDNVCTYFDVPIQHASSRILRRMGRNYTREDLDRLIAFIRKTAPDA 298 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 LR+T I GFPGETE DF LL F+KE R D++G F YS + ++ L D V EE E Sbjct: 299 ALRTTLITGFPGETEADFNELLAFVKEIRFDQLGVFAYSDSDDLASHGLKDHVDEETGEA 358 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNGETN 417 R + M Q +IS + +G+ V+++E +EG +GR+ APE+DG ++ GE N Sbjct: 359 RRDAIMAAQAEISESLNEAYLGKTFTVLVEENPDEGIFLGRTNFQAPEVDGITFIYGE-N 417 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 + G +RVK+ YDL G V Sbjct: 418 IDIGTFVRVKITETHAYDLVGELV 441 >UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSZ3_9BACE Length = 471 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 119/454 (26%), Positives = 208/454 (45%), Gaps = 35/454 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 P + GC +N DSERI L+ GY +A ++++NTC + A Q L Sbjct: 32 KAPLAFVDTYGCQQNEADSERIRGYLKEMGYGFTQDEKEAAVIVINTCAIREHAEQRVLG 91 Query: 66 AIG-----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 +G + N N + + GC+ + +IR + V + GPH+ + E ++ + Sbjct: 92 NVGALVHTKRKNPNQIICLCGCMVQEPHNAAKIRTSYRHVDMVFGPHALWRFPEFLYRIL 151 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + P + P A++ I GCN+ C++CI+P +RG SR Sbjct: 152 TRRGRIFETADDPGSIAEGIPVVRQNGVKAWVSIMYGCNNFCSYCIVPYVRGRERSRDPE 211 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--G 230 +L+E + L AG KEI ++ Q+ ++YG D+ P L +++ + Sbjct: 212 GILAEVEELAKAGYKEITLLGQNVNSYGKDL----------PEPMDFADLLRKVNAVPGD 261 Query: 231 IWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R +P + + MAE K+ P + +P+Q + R+LK M R + + L +++ Sbjct: 262 FLIRFMTSHPKDATEKLFDAMAECEKVAPVIHLPVQAGNNRVLKAMNRVYTREIYLEKVR 321 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 Q R+ P++ L S IVGFPGET E+F+ + L+E D + F YSP EG A +PD Sbjct: 322 QLRQRIPDIVLTSDIIVGFPGETTEEFEDTMSLLREVEYDALFTFIYSPREGTPAAKMPD 381 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEI 406 + +E K + R + LQ +IS ++ Q G+ I ++D ++ R+ Sbjct: 382 PMSKEEKSANFQRLVDLQNEISLKKHQAYEGKTIRCLVDGRSDDPRNNLTARTPGGR--- 438 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ G+ + G + + + L+G Sbjct: 439 --LVHFTGDEKL-IGTYQNLTITGCSTWALFGEL 469 >UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2I9_SPHTD Length = 460 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 120/445 (26%), Positives = 207/445 (46%), Gaps = 26/445 (5%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + ++GC N +S + L GY ++AD++IVN+C +A + Sbjct: 19 AAKRYCIWTIGCQMNEAESAKAAAMLSQAGYLQTHLEEEADVIIVNSCVVRQAAEDKVAG 78 Query: 66 AIG-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 +G + + + ++ +TGC+ +E + E P V GP +E+++E Sbjct: 79 KLGSLARLKRVRPDVRIALTGCMVTGQEQALAERFPHVDLFYGPSQFERLVEIAPELAHV 138 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 L + + A++ I GCN C++CI+P RG SRP+ EV++E + Sbjct: 139 DTDLAELPHFYQPDAAGSDVT-AFVPIIYGCNFVCSYCIVPYRRGRERSRPMAEVIAEVE 197 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 RL + GVKE+ ++ Q +AYG D+ P + L ++++ R+ ++ Sbjct: 198 RLAERGVKEVTLLGQTVNAYGHDL----------PGSPDLADLLTAVNEIPGIERIRFLT 247 Query: 240 PYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +P D ++ +A K ++++P+Q +L+ M+R +VD RI RE P Sbjct: 248 SHPKYMSDRIVQAVATLPKACEHINLPVQAGDDEVLRRMRRTYTVDFYRERIAYIRETIP 307 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +T+ + IVGFPGETEE FQ LD L E RLD+V YSP + D +P + K Sbjct: 308 GVTVSTDIIVGFPGETEEQFQRTLDLLAELRLDKVHVAMYSPRPRTLSARWEDDIPWDEK 367 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 R +LQ QI ER + +G +++D + + GR+ + V+ Sbjct: 368 RRRHQAVEKLQAQILGERNRGYLGATFEILVDGMAKGRWRGRTRGND-----LVFFEAPG 422 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 + K G + V++ A + L G V Sbjct: 423 DWK-GKFVDVRITEASPWYLLGEPV 446 >UniRef50_C8WY42 MiaB-like tRNA modifying enzyme n=58 Tax=Bacillales RepID=C8WY42_ALIAD Length = 471 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 125/455 (27%), Positives = 199/455 (43%), Gaps = 39/455 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + F +LGC N D+E I + GY VP AD+ +VNTC + ++S + Sbjct: 1 MPTVAFHTLGCKVNFYDTEGIWQTFKRRGYTQVPFDSVADVYVVNTCTVTHTGDRKSRQM 60 Query: 67 IGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I A+ N + V+VTGC V + G ++++HV + + K Sbjct: 61 IRRAVRTNPDAVVVVTGCYAQIAPDEIARIQGVDLVVGNDQKSKIVDHVEAVLAERKPYL 120 Query: 125 FL-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + R A LKI +GCN+ CTFCIIP RG + SR V+ + Sbjct: 121 AVGNIMQATEFDELDVPYFEERSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQ 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRL 235 A +L AG +EI++ T YG D ++ + L L ++ R+ Sbjct: 181 ATKLARAGYREIVLTGIHTGGYGEDFEN-----------YRLADLLLDLERIDLPFRIRI 229 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + D ++ ++A K++P+L IPLQ S +L+ M R + ++++ R Sbjct: 230 SSIEASEIDDRLMDVLAASKKVVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLRELRRR 289 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P+L + + IVGFPGET+E F F++ ++ F YSP G A DQVPE+ Sbjct: 290 LPDLAVTTDVIVGFPGETDEQFGETYAFVRAQGYAQLHVFPYSPRRGTAAYKFKDQVPED 349 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAPE------- 405 VK R R + L + VGRE+ VI + + R+ + PE Sbjct: 350 VKRARVARMIALGDDLRQAYAASFVGRELEVIAESPLASADDEARRAYSHLPEASRMLVG 409 Query: 406 IDG---AVYLNGETNVK----PGDILRVKVEHADE 433 DG V ++V G+++RV++ Sbjct: 410 YDGHYLRVAFEAPSDVPLESMIGEVIRVRMTGVGP 444 >UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MIAB_AKKM8 Length = 458 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 125/464 (26%), Positives = 225/464 (48%), Gaps = 45/464 (9%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 PK+ + GC N DSE++ +GY + D+AD+++ N+C + A Q++L Sbjct: 1 MPKLYIKTYGCQMNERDSEQVARMFVQKGYTMTDREDEADVILFNSCSIREQAEQKALGK 60 Query: 67 IG---EALNENGKVI--VTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + V+ + GC+ K++++ + P++ + G Y +V EHV + Sbjct: 61 MGLLAKQQRHRPHVVYGMMGCMAQSKKEELFKELPRLDLVVGTQKYHRVFEHVDGILRAR 120 Query: 121 KHNPFLSLVP--------------------EQGVKLTPRHYAYLKISEGCNHRCTFCIIP 160 + L + R AY+ I +GC +C +CI+P Sbjct: 121 QERRMDELQTAFSGTHVCDVAEEADSQNRIRDHLNPGVRSTAYVSIMQGCEMKCAYCIVP 180 Query: 161 SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV 220 RG SRPI +V+ E K L DAGVKE+ ++ Q + YG ++ G K V Sbjct: 181 YTRGAERSRPIRDVVDEVKMLADAGVKEVTLLGQIVNRYGRQMETAGG-------KGGFV 233 Query: 221 SLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKR 277 L E + ++ R+ +V P+P D++ K+ ++ P+Q S RILK+M+R Sbjct: 234 QLLEAVHEVEGIRRIRFVSPHPIGFRQDLVQAFTYLPKLCSHIHFPMQSGSDRILKMMRR 293 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 P + L + ++ P+L++ + IVGFPGETEED+ + +++ + D F+YS Sbjct: 294 PYRNETYLDLCSRMKQARPDLSITTDIIVGFPGETEEDYLLTRQAVEQVQFDNAFIFRYS 353 Query: 338 PVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-- 395 P G A + +Q+PEEVKE R + + +I+ + ++ VG V+++ + A Sbjct: 354 PRRGTPAAVMENQIPEEVKEARNQDLLAVVNEIAIRKNRDLVGTVQEVLLEGPSKTNAAR 413 Query: 396 -IGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 GR+ + P V ++ ++ G+IL +++E + + L+G Sbjct: 414 LSGRTSQNKP-----VMVDAAPDL-AGEILPIRIEESTGFTLYG 451 >UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNN8_9FIRM Length = 430 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 120/446 (26%), Positives = 198/446 (44%), Gaps = 29/446 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ +LGC N ++E + + GY+VVP AD+ ++NTC ++S + I Sbjct: 1 MKVALTTLGCKVNQFETETMEGLFKQRGYEVVPFEARADVYVINTCSVTSLGDRKSRQII 60 Query: 68 GEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKHNP 124 A EN V V GC + V + G ++++V + Sbjct: 61 RRAHRENPQAIVAVCGCYAQVAPDEIKAIEGVRVVLGTKERAHIVDYVEKAMQEDGIQGT 120 Query: 125 FLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ + + P R A+LKI +GC + C++CIIP RG + SR V EA Sbjct: 121 ITDIMKAKTFEDIPLYDSPERTRAFLKIEDGCQNFCSYCIIPYARGPVKSRLPEHVHREA 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 ++LV G KEI++ AYG D+ P ++ C ++ + RL Sbjct: 181 EKLVAMGFKEIVLTGIHLGAYGRDL----------PGDITLADACREVLSVPGLKRLRLG 230 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + ++ L+ E + +L +PLQ S ++LK M R I+ E Sbjct: 231 SLESIELSPELFALIREDERFCAHLHLPLQAGSDKVLKDMNRHYDTQEFARLIEHIEEEV 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + + IVGFPGETEEDF+ L F+++ R+ F YS G A A DQV E V Sbjct: 291 PGVAISTDIIVGFPGETEEDFEQGLSFVEKMNFARMHVFPYSRRTGTPAAARKDQVDEAV 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +R L + + E + +GRE+ V+ + + G + D + + + Sbjct: 351 KKERVHRMQALADRKAEEFHRSFIGREMRVLFETAKDGITDGLT-------DNYIRVYTD 403 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 V G+I +V+++ +W V Sbjct: 404 EAVDCGEIYKVQIDKLWRDGVWAHCV 429 >UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RIMO_THEYD Length = 425 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 172/439 (39%), Positives = 259/439 (58%), Gaps = 18/439 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++LGCPKN VDS ++ L EG+ V + AD V +NTC FI+ A +ES++ Sbjct: 1 MKNFTVITLGCPKNTVDSRHLIDALTKEGFYYVEEFKKADFVFINTCCFINDAKEESIDE 60 Query: 67 IGEALN--ENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 I A + K+IV GCL + ++ + P++ + G +++++++ + K++ Sbjct: 61 ILTAAKFKIDRKLIVFGCLSKRYGKELEKEIPEIDAVFGVDEKDKIIDYIKQF---SKNS 117 Query: 124 PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 F+S + V+ P Y Y+KI+EGC+ RC+FCIIP +RG S E+L E + V Sbjct: 118 NFISQNFQYTVE--PPSYRYIKIAEGCSRRCSFCIIPDVRGPFRSLNPEEILKEVENFVH 175 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 +G+KE ++++QD + YG D+K G +K + LC K W RL Y+YP Sbjct: 176 SGIKEFILVAQDITQYGKDLK-------GYTLKRLLKDLCSI--KGDFWIRLLYLYPSDI 226 Query: 244 VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +++I +A E KI+ YLDIP+QH+ RIL+LM R G+ L +IKQ R+ PE+TLRS Sbjct: 227 DENLIETIADEEKIVKYLDIPMQHSEERILRLMGRRGTKKEYLKKIKQIRQAIPEVTLRS 286 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 TFIVGFP ETEE+FQ L+DF++E + DR+G FKYS EG A +L Q+PE VK R+N Sbjct: 287 TFIVGFPTETEEEFQRLVDFIEEVQFDRLGVFKYSKEEGTKAYSLKGQIPENVKNRRYNE 346 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 M Q IS E+ + +G++ +ID +D + AI R APEIDG V L ++K G+ Sbjct: 347 IMARQAVISLEKNRALIGKKYEALIDYIDADIAIARLYCHAPEIDGVVILENTADLKAGE 406 Query: 423 ILRVKVEHADEYDLWGSRV 441 + + + EYD+ G V Sbjct: 407 KVTILITEGYEYDVKGVIV 425 >UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 n=2 Tax=environmental samples RepID=B3TCC0_9ARCH Length = 472 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 118/454 (25%), Positives = 210/454 (46%), Gaps = 34/454 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ + GC N+ D++R+ L GY +DAD+++VNTC + A Q++ Sbjct: 22 MKQVYLDTFGCQMNVADTDRMELVLFHSGYQRTLEKEDADLILVNTCSIREKAEQKTFSL 81 Query: 67 IG-----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 G + N + + +TGCLG +E + + + P + + GP E + + V Sbjct: 82 FGGLKPLKMANPDLILGLTGCLGQQEGEKLLKRMPYLDFVIGPDQVEGIAQAVDRVRNTG 141 Query: 121 KHNPFLSLVPE---------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K + E + + P A++ I +GC+ CTFC++P RG SR Sbjct: 142 KTFVWTGFDQEKVYSIPELSRDLPKAPGPSAFVNIIKGCDKFCTFCVVPFTRGREKSREP 201 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 E+ E + LV+ G KEI+++ Q+ ++YG G L ++++ Sbjct: 202 EELFEEIRHLVNHGAKEIILLGQNVNSYGK---------RGLKKPVPFHELLYGIAEIPG 252 Query: 232 WTRLHYV--YPYPHVDDVIPLMAEGKI-LPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 RL + +P D I + I + +L +P+Q + ++LK M+R +++ L + Sbjct: 253 VQRLRFTTSHPNDFTRDTIRAYRDLDILMNHLHLPVQSGNNQMLKAMRRDHTIEEYLDLL 312 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + + P ++L + IVGFPGET+E F L ++E F YSP G AN L Sbjct: 313 AELKSEVPGISLSTDIIVGFPGETDEAFGDTLKIMEEVGYSSSFMFAYSPRPGTPANELS 372 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPE 405 D VPEE K+ R + LQ + + ++ Q +G+ + V+I+ + GR+ P+ Sbjct: 373 DSVPEETKKRRLQEIIALQSRQTKQQGQSFIGKNVEVLIEGRSSKPGYVYKGRN----PQ 428 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 GE ++ G+ + V V+ + L G+ Sbjct: 429 YWNVNIQGGEGILQAGETVTVLVKQVSGHSLNGT 462 >UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZS6_9BACT Length = 447 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 124/450 (27%), Positives = 216/450 (48%), Gaps = 33/450 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + F + GC N +D+E L L+ +GY +V ++AD+++ NTC A + + Sbjct: 14 KTVFFETFGCQMNKLDAELSLGLLQEDGYSIVDKVEEADVILYNTCSVRQHAEDKVYSHL 73 Query: 68 G-----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + + + + V GC+ K+ Q I + P V + G + ++ E + Sbjct: 74 GALRTLKKKHPDVIIGVLGCMAQKDAQSIFKRMPHVDLVCGTRMFTRLPELLLKIRNHGN 133 Query: 122 HNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 H + VK + A++ + GC++ C++CI+P +RG VSR I +V Sbjct: 134 HVLAVDEDEIVDVKRIAAYRPNVYQAFVTVMRGCDNYCSYCIVPYVRGREVSRTIADVER 193 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E LV G +EI ++ Q+ ++YG + P ++ L +L+ + RL Sbjct: 194 EVLELVSNGCREITLLGQNINSYGKSL----------PGNITLGDLLIELNGIEKLERLR 243 Query: 237 YVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +V +P D+I M++ K YL +P Q S RILK M R + I+ R+ Sbjct: 244 FVTSHPKDMSRDLIRTMSQLDKACEYLHMPAQSGSDRILKKMHRGYTAGYYRELIQYARD 303 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + P + + FIVGFPGETEEDFQ + +++ R FKYS G A L D VP+ Sbjct: 304 LMPTIKVAGDFIVGFPGETEEDFQETVCLMEDIRFQNSFIFKYSTRTGTKAAELTDDVPD 363 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDGAV 410 E+K++R + LQ++IS E ++ +GR++ V+++ D GR+ + V Sbjct: 364 EIKKKRNTTLLDLQKKISLEENKKLIGRKLQVLVEGASKSDPNKLSGRTRQN-----NIV 418 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSR 440 G+ + G ++ + + A + L+G+ Sbjct: 419 VFKGQPAL-VGTLVDITINEATDLTLFGTI 447 >UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Bacteroidales RepID=MIAB_PORG3 Length = 465 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 115/461 (24%), Positives = 206/461 (44%), Gaps = 36/461 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 ++ + K+ + GC N+ DSE + + ++ +GY + + D+AD ++VNTC D+A Q Sbjct: 12 AENKQERKLYIETYGCQMNVADSEVVASVMQMDGYSLTDNVDEADTILVNTCSVRDNAEQ 71 Query: 62 ESLEAI------GEALNENGKVI--VTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHV 113 + L + + + +++ V GC+ + + V + GP SY + V Sbjct: 72 KVLNRLAYYHSLRKKRRASSRLVIGVLGCMAERVKEELIREHHVDVVAGPDSYLDLPNLV 131 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 K + E + P ++ I GCN+ C++CI+P RG Sbjct: 132 GAAEQGEKAINVELSMQETYKDVMPLKMGGVHINGFVSIMRGCNNFCSYCIVPYTRGRER 191 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I +L+E + L +E+ ++ Q+ ++Y + R L ++ Sbjct: 192 SREIESILNEVRDLKAKNFREVTLLGQNVNSYRYEQNGRI---------IRFPDLLAAVA 242 Query: 228 KLGIWTRLHYVYPYP--HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 + R+ + P+P D+ I +MA + I ++ +P Q S ++L++MKR + Sbjct: 243 EAVPDMRIRFTSPHPKDMDDEAIAVMARYRNICNHIHLPAQSGSDKMLRVMKRGYTRRWY 302 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 L R+ R P+ + S GF ETEEDF+ L ++E D FKYS G A Sbjct: 303 LDRVAAIRRAIPDCAISSDLFCGFHSETEEDFEATLSLMEEVGYDSAFMFKYSERPGTYA 362 Query: 345 NA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSM 400 L D V EEVK R +R + LQ ++S E + + + V+I+ + E GR+ Sbjct: 363 ARHLVDDVLEEVKLARLDRMIALQNRLSEESNKRDISKTFEVLIEGFSKRSREQLFGRTQ 422 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + V + + + G + V+++ A L+G V Sbjct: 423 QNK------VVIFDKNGHRVGQYIYVRIKDASSATLFGEVV 457 >UniRef50_B1I695 MiaB-like tRNA modifying enzyme n=6 Tax=Clostridia RepID=B1I695_DESAP Length = 450 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 121/453 (26%), Positives = 198/453 (43%), Gaps = 38/453 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F +LGC N +++ + R GY V+P + AD+ +VNTC ++S + Sbjct: 1 MKKVAFYTLGCKVNQAETQGLAALFRDRGYKVIPFEETADVYVVNTCTVTREGDRKSRQV 60 Query: 67 IGEALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY-----VPK 119 + A+ N + V+VTGC + P V + G E++++ V VP Sbjct: 61 VRRAVRANPEALVVVTGCYAQVAPEEAGAIPGVSLVIGTSGRERIVDLVEQAAARCPVPA 120 Query: 120 PKHNP-----------FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 K P G R A++K+ EGC CT+CI+P RG L S Sbjct: 121 EKKGPGPFLAVGDIEQAREFEDLPGTADPGRTRAFIKVQEGCRDFCTYCIVPYARGPLRS 180 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP VL A+ LVD G E+++ + AYG D+ ++ L +L + Sbjct: 181 RPPERVLELARGLVDRGYSELVLTGVNLGAYGRDLGT-----------ENLPGLVRRLVR 229 Query: 229 LGI--WTRLHYVYPYPHVDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQL 285 + RL V P +++ +AE + P+ IPLQ S +L M R S Sbjct: 230 IPGLARLRLSSVEPNEITRELVEAVAENPVCAPHFHIPLQSGSDSVLSRMGRRYSTGEFT 289 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 + R PE+ + + +VGFPGET + + L++++ + F YSP G A Sbjct: 290 GLVDMVRARVPEVAVTADVMVGFPGETAAEHRESLEYVRRIGFAGLHVFVYSPRRGTPAA 349 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE 405 + PD VP VK+ER + L +++ GR + V+++ V A G + Sbjct: 350 SFPDPVPYRVKKERSREMLALGRELRDRFASRYRGRTVEVLVESVSGGVASGYTPNYL-- 407 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 V+ + G I++V + A++ +L G Sbjct: 408 ---RVFFKNGPEL-AGRIVKVYADGAEQGNLRG 436 >UniRef50_B0TAE1 Miab-like tRNA modifying enzyme n=2 Tax=Clostridiales RepID=B0TAE1_HELMI Length = 446 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 113/431 (26%), Positives = 188/431 (43%), Gaps = 28/431 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 +P F +LGC N +++ I + GY +VP AD+ +VNTC + ++S +A Sbjct: 5 EPTAAFHTLGCKVNQGETDAIAGMFKARGYAIVPFDAPADVYVVNTCTVTHLSDRKSRQA 64 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHH-YVPKPKHN 123 I +A N + V+VTGC + V + G +++ V N Sbjct: 65 IRKANRQNPDAVVVVTGCYAQTAADEVQAIEGVDIVVGTDRRSAIVDLVEEHRRSGETVN 124 Query: 124 PFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + P R A +KI +GC+ CT+CIIP RG + SR I V+ E Sbjct: 125 TVYDSCRIERFEELPAAPERSRARATIKIQDGCDLYCTYCIIPYARGPVRSRRIESVVEE 184 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A RL G KEI++ AYG D + L +L ++ R+ Sbjct: 185 ATRLTGEGFKEIVLSGIHLGAYGSDFN------------ADLAKLIVELCRIPGLRRIRV 232 Query: 236 HYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 V P +++ + ++ P+ IPLQ S +L+ M R L ++ +++ Sbjct: 233 GSVEPQEFTPELLEAVVHPRVCPHFHIPLQSGSDAVLERMGRRYRRQDFLDVTRKIQQMI 292 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + S IVGFPGE E D+ + + + L + F YSP G A PDQ+P V Sbjct: 293 PGVAITSDVIVGFPGEREADYLLSEELCRATGLAGLHVFPYSPRRGTPAATFPDQIPSAV 352 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER R +L ++++++ + VG+ V+ +E + G + V+ Sbjct: 353 KQERAQRLAKLARELASDYAKGFVGQIREVLAEEQVDGVWTGHTDNYL-----KVFFTDP 407 Query: 416 TNVKPGDILRV 426 P + + V Sbjct: 408 AGSSPEETVPV 418 >UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR40_9FIRM Length = 447 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 117/442 (26%), Positives = 203/442 (45%), Gaps = 25/442 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F++LGC N DS+ + + GY V ++AD+ ++NTC ++S + + Sbjct: 11 KKVSFITLGCKVNQYDSDAMRSLFIRNGYKVAKENENADVYVINTCSVTSIGDRKSRQMV 70 Query: 68 GEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH--- 122 E+ + GC + V I G + ++E+V + K Sbjct: 71 RRIRREHPGAVIAAAGCYAQLAPDVFVQMGDVDVIVGIQNRSHIVEYVEEAAAEKKTLNA 130 Query: 123 -NPFLSLVPEQGVKLTP----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 +++ + + + + A++KI EGC++ CTFCIIP RG L SR + + E Sbjct: 131 VGDIMAVTDFENLSVDAEGEVKTRAFIKIQEGCDNYCTFCIIPFARGKLKSRRQSDAVEE 190 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 +RLV+ G +E+++ YG D+ T + L RL Sbjct: 191 IRRLVEKGYREVVLTGIHLGNYGKDLHDGTSLSTLVTELVRIPDLL--------RIRLGS 242 Query: 238 VYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 + D++I ++ E K+ P+L +P+Q S ILK M R + I+ R+ P Sbjct: 243 IESVELSDELIRIIREEPKVCPHLHLPIQAGSDDILKRMNRHYRLAEYKELIRNLRKEIP 302 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 L L + IVGFPGETEE+F+ LD L+E + + F YSP +G A A P+QV E+K Sbjct: 303 GLALTTDLIVGFPGETEENFRETLDTLQELQFSAIHVFPYSPRKGTPAAAYPNQVKPEIK 362 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 +ER R L ++++ + + + V+++E E G S V++ + Sbjct: 363 KERAARVQALGKELAGAYRNQFFHKMVRVLVEEEKEGFFEGVSDEYI-----RVFIK-DK 416 Query: 417 NVKPGDILRVKVEHADEYDLWG 438 +V+ G + V ++ + + G Sbjct: 417 DVEKGKVYSVWIDSMTDNGMIG 438 >UniRef50_C7RHT5 RNA modification enzyme, MiaB family n=3 Tax=Anaerococcus RepID=C7RHT5_ANAPD Length = 449 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 111/452 (24%), Positives = 202/452 (44%), Gaps = 35/452 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC N DSERI L GY AD ++ NTC ++A + + Sbjct: 14 KTYNITTFGCQMNEHDSERISYILEDLGYTKTEDRSSADFILFNTCLVRENAELKLYGQV 73 Query: 68 GEALN-----ENGKVIVTGCLGA---KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 + V+GC+ + I + H +V I G + +++ + Y+ Sbjct: 74 SSLKKLKKEHPEKIIAVSGCMMQTSTAREVIIKDHKEVDIIFGTKNINSLVDLIFRYLET 133 Query: 120 PKHNPFLSLVPEQGVKLTPRHY----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + +S + + A++ I GC++ C++CI+P RG SR +L Sbjct: 134 NERVIDISTDDVKDDYVNYNTLNDFQAFVNIMTGCDNFCSYCIVPESRGREESRRPSAIL 193 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E + LV+ G KEI ++ Q+ ++YG N + L E++S++ RL Sbjct: 194 AEVEHLVEEGYKEITLLGQNVNSYG----------NKADFDMTFPELLEKISQIEGLKRL 243 Query: 236 HYVYPYPH--VDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + +P D++I ++ I Y +PLQ S ++LK M R ++ + R K+ R Sbjct: 244 RFTTSHPKDLSDELIEVIKNNDNICNYFHLPLQSGSSKVLKDMNRKYDQEKYIERAKKLR 303 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E P + + + IVG+P ETEEDF+ L +E D FKYSP A L + Sbjct: 304 EEIPGIAISTDIIVGYPTETEEDFKETLKVCREIEFDSAFTFKYSPRPKTRAAKLTP-ID 362 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGA 409 +E+ ++R++R + I E+ +E +G+ + V+++ + GR+ + Sbjct: 363 DEIVQDRFDRLLDTIYPIFNEKNKEYIGKTVEVLLESESKNNPDILTGRT-----DTFKL 417 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V++ + G+I++VK+ + + G V Sbjct: 418 VHVKASKKL-IGEIVKVKITDNTSFTISGELV 448 >UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMH4_9BACT Length = 452 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 130/452 (28%), Positives = 218/452 (48%), Gaps = 23/452 (5%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + K+ + GC N DSE + +L GY++ DAD++I+NTC D A +++L Sbjct: 2 SKEKVLIKTYGCQMNDRDSEAVEMDLLKSGYEITTEEKDADVIILNTCSVRDQAERKALG 61 Query: 66 AIG-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 +G N +V V GC+ + D I E + V + G ++ E + Sbjct: 62 KVGSLIKLRRKNPKLQVGVIGCMAQSRADDIVEKNAHVNFVAGTDQLHKIPELIEKSKDT 121 Query: 120 PKHNPFLSLVPEQGVKLTPRH----YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 L + +L A + I GCN CT+CI+P RG SR I ++ Sbjct: 122 EDALIETGLSRDIMERLDNHPEGQMNASVAIMRGCNEYCTYCIVPFTRGQEKSRTIASII 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E K L + GV+EI+ + Q+ +AYG+ R N E +L + +K+ R+ Sbjct: 182 AEVKALSEKGVREIMYLGQNITAYGLIEARRDRTFNKEVSP--FAALLRETAKIEGIKRI 239 Query: 236 HYVYPY--PHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + P+ DD+I +A E KI + PLQ S R+LK+M+R + + L+ I + + Sbjct: 240 RFTSPHARYFNDDLIDTIAAEPKICRAIHFPLQSGSNRLLKVMRRRHTAEEFLSWINKMK 299 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E +T + IVGFPGETEEDF+ D E D+ F+YS + A +P+Q+ Sbjct: 300 ERIDGITFTTDLIVGFPGETEEDFKATRDMCNEIDFDQQFIFRYSTRKNTPAAQMPNQLD 359 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGA 409 EE K ER ++ ++ + +++VG ++++ V + GR+ Sbjct: 360 EETKIERNQILLKDLEERLTHKNEQRVGTIEEIMVEGVSKRNDDKWTGRTTNYK-----I 414 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + +VK GD++ +K+E A ++ L+GS V Sbjct: 415 VIFDPQEDVKVGDLINIKIERATQHALYGSYV 446 >UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Coriobacteriaceae RepID=C8WHJ1_EGGLE Length = 459 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 121/453 (26%), Positives = 206/453 (45%), Gaps = 33/453 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + GC N DSERI L G V + +DAD+V TC ++A + Sbjct: 10 FCIRTFGCQMNKHDSERIAGMLEGMGALQVDAIEDADVVAFMTCCVREAADTRLYGQVAS 69 Query: 70 ALN---------ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 N V V GC+G ++ + + + + + G H+ + + + + Sbjct: 70 LKNVPLRAGTPLSKRIVAVGGCIGQRDGEKLVDELKHLDVVFGTHNLGSLPRLLEAALEE 129 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 H + P A+L I+ GCN+ C++CI+P +RG SRP+ ++ Sbjct: 130 GSHQVEVLDAASSFPTELPTAREHEWAAWLPITIGCNNFCSYCIVPYVRGREKSRPLEDI 189 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 ++EA+R V AGVKEI ++ Q+ ++YG D+ + + L + GI Sbjct: 190 VAEAERYVAAGVKEITLLGQNVNSYGRDLYGSP----------RFAQVLDALDQTGIERL 239 Query: 234 RLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P D+V+ A + ++P L +P+Q S +L M R + D A + + R Sbjct: 240 RFATSHPKDLNDEVVGRFATLRSLMPALHLPVQSGSDAVLAAMNRRYTRDHYRALVAKLR 299 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P++ L + IVGFPGET +DF+ + E +V F YS EG A ++ D P Sbjct: 300 DAVPDIALSTDIIVGFPGETAKDFEDTYRLVDEVGYHQVFTFIYSKREGTPAASMDDDTP 359 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 EV ++R++R + L QQ + E Q +G + V+++ + R +A + V+ Sbjct: 360 REVIQQRFDRLVDLVQQRAFEANQRDLGSTVDVLVEGASKRDE--RLLAGKSPKNQTVHA 417 Query: 413 NGETNVK----PGDILRVKVEHADEYDLWGSRV 441 V+ G +RV+V+ A + L G V Sbjct: 418 PAPAGVRAEDLAGSTVRVRVDEAKTWYLAGEIV 450 >UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Prevotella RepID=D1W9B3_9BACT Length = 497 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 26/454 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N+ DSE + + ++ GY++ ++AD + +NTC ++A + Sbjct: 49 MKKLYIETYGCQMNVADSEVVASVMQMAGYEICDKEEEADAIFLNTCSVRENAENKIYNR 108 Query: 67 I-----GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + N + V GC+ + + + GP SY + + + K Sbjct: 109 LDSLHAERKKGRNLILGVLGCMAERVKDDLLDNHHTDLVCGPDSYLNLPDMIAQAETGNK 168 Query: 122 HNPFLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 E + P+ ++ I GCN+ C +CI+P RG SR + +L Sbjct: 169 AIDIELSKTETYKDVVPQRLLIGKIGGFVSIMRGCNNFCHYCIVPYTRGRERSRDVESIL 228 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT--SMVSLCEQLSKL--GI 231 E + L D KEI ++ Q+ ++Y + L +++ G+ Sbjct: 229 REVRDLRDKHCKEITLLGQNVNSYCFTIPEHLSATGETIPAETIDFPKLLRRVAHEVPGV 288 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R +P DD + ++AE + ++ +P+Q S +ILKLM R +V+ + RI Sbjct: 289 RIRFTSSHPKDMSDDTLRVIAEEPNVCKHIHLPVQSGSNKILKLMNRKYTVEWYMDRINA 348 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPD 349 R I P+ + + VG+ GETEED Q L ++ D FKYS G A+ LPD Sbjct: 349 IRRIIPDCGISTDMFVGYHGETEEDHQQSLVLMRTVGYDSAFMFKYSERPGTYASKHLPD 408 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPEI 406 VPEE K R N + LQ ++SA ++ G+ V+++ + E GR+ E Sbjct: 409 DVPEEEKIRRLNEMIHLQTELSAVSNKKDEGKTFDVLVEGFSKRSREQLCGRT-----EQ 463 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + V + + N G+ +RV++ + L G Sbjct: 464 NKMVVFD-KVNHHIGETVRVRIVGSTSATLLGEA 496 >UniRef50_D2RJ51 RNA modification enzyme, MiaB family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJ51_ACIFE Length = 437 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 120/448 (26%), Positives = 203/448 (45%), Gaps = 24/448 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 KI F +LGC N D+ + R G+ +V + AD+ ++NTC + +S + Sbjct: 1 MKKIAFYTLGCKVNQSDTASMEKLFRDAGFQIVDFEEPADICLINTCVVTNMGQSKSRKI 60 Query: 67 IGEALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK-PKHN 123 I A + K ++VTGC V I G +V+E V + + P Sbjct: 61 IHRAARRDPKPLIVVTGCYPQTSPDEVVHIDGVDLIIGNQDRSKVVELVRERLGESPDEA 120 Query: 124 PF---------LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 P R+ A+LKI EGC+ C +CIIP RG L SR + + Sbjct: 121 PINAVHDLPVGREFEELDAAVDASRNRAFLKIQEGCDQYCAYCIIPYARGHLRSRSLDNI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 E +L KEI++I YG ++ G + ++ + ++ R Sbjct: 181 REEVAKLTAEQYKEIVLIGIHLGCYGKEIPG------GPHLSDAVKAALSAEPQVP-RLR 233 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + D ++ LMA E ++ +L +PLQ L M RP + +++ R Sbjct: 234 LGSLESVEVEDALLDLMAREPRLCAHLHLPLQAGCDSTLARMHRPYDTAKFAQLLEKIRS 293 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + P + + + IVGFPGETEEDFQ LDF+++ R ++ F YS +G A +PDQ+ Sbjct: 294 LVPNVAITTDVIVGFPGETEEDFQASLDFIRQCRFSKIHIFPYSQRKGTPAAVMPDQISN 353 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 + K+ER +R ++ ++ + +E++G+E V+ + ++ + + VY + Sbjct: 354 QEKQERVHRLEEVDREGNLAYRKEQIGQESTVLWERRNKNNGLWEGLTPGYV---RVYAD 410 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 N+K G I V++E+ E L G + Sbjct: 411 SPENMK-GKISAVRLENLFEDGLKGGII 437 >UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDK5_DESAH Length = 460 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 121/461 (26%), Positives = 219/461 (47%), Gaps = 38/461 (8%) Query: 4 VTPQPK--IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 T PK ++GC N D+ER+ L GY AD+++ NTC + A + Sbjct: 8 HTENPKGYAYIYTIGCQMNTYDTERLFFILGGLGYVKTNDLHRADIIVCNTCSIREKAQE 67 Query: 62 ESLEAIGE-----ALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ++ +G + I+TGC+ +E +++ + + + + G ++ ++ H+ + Sbjct: 68 KAFSFLGRVPPLKKAKPHLITIMTGCVAQQEAEEVFKRNACIDIVLGTQAFSRLGGHIMN 127 Query: 116 YVPK-------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + +P+ + ++ I +GC++ CT+C++P +RG S Sbjct: 128 VLNGRGQITDVEDSPAIYEAMPDFSFIDNDKVSRFVTIMQGCDNFCTYCVVPYVRGRERS 187 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 R ++ E L DAGVKE+ ++ Q+ ++YG + S L EQ+S+ Sbjct: 188 RTPESIVEEISILADAGVKEVTLLGQNVNSYGQ-----------KEQICSFSDLLEQISR 236 Query: 229 LGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ + +P DD+I + + K+ L +P+Q S RILK M R + ++ L Sbjct: 237 VSGIERIRFATSHPKDLSDDLIYAIRDIDKVCNQLHLPVQSGSNRILKKMNRGYTKEQYL 296 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 R+ + R+ CP + L S I+GFP ET DF +D ++ D + F YS A A+ Sbjct: 297 ERVGKLRKNCPSIALSSDMIIGFPSETRADFDETMDLVRRVEFDGIFAFAYSDRPQAPAS 356 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADA 403 D V + K ER N +Q Q +++ ++ Q VG V+++ + + G + +D Sbjct: 357 KFSDGVEDAEKMERLNELIQFQDEMTHQKNQALVGAWEQVLVEGLSQKKRHDEGENPSDF 416 Query: 404 PEIDGA------VYLNGETNVKPGDILRVKVEHADEYDLWG 438 P++ G V+ G NV PG+IL VK+++A + LW Sbjct: 417 PQMTGRTESGKIVHFYGN-NVCPGEILDVKIKYAYPHSLWA 456 >UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGL8_DESAA Length = 451 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 159/454 (35%), Positives = 253/454 (55%), Gaps = 25/454 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 S Q + VSLGC +NLVDSE IL L + G+ + +A+ +I+N+CGF+ +AV Sbjct: 3 SNTDNQEIVHLVSLGCVRNLVDSELILGALASGGFALTEDPAEAETIIINSCGFVRAAVD 62 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 E+++ + E + ++++ GC+ + ++ E P++ + GP +++ ++E + Sbjct: 63 ETIDVVLEMAHYKEEGRCQRLVLCGCMAQRYGKELEEALPELDMVVGPGAHKDIVELLRR 122 Query: 116 YVPKPKHNPFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 P S P Q + H AY+KISEGC RCTFC+IP +RG SRP+ Sbjct: 123 PTGFICQVPDPSTAPLQQASFPRICSTPHMAYIKISEGCPDRCTFCMIPQLRGAWRSRPL 182 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +++ EA L+ G KEI++++QDT+AYG+D + +TS+ L L +L Sbjct: 183 DDIVEEAGNLIQWGAKEIILVAQDTTAYGLDFDKQN--------RTSLDQLLSSLCRLEG 234 Query: 232 WTRLHYVY--PYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 TR ++Y P D ++ A ++ Y D+P+QH S RILK+M R + D L Sbjct: 235 ETRFRFLYGHPNRVTDALLETAASQPRVCSYFDLPVQHGSDRILKMMGRKNTRDEMLRLF 294 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ R P++ LR+T +VGFPGETEEDF L++F++EAR D +G F YS E ++ LP Sbjct: 295 EKIRATVPDVALRTTALVGFPGETEEDFNQLVEFVQEARFDHLGVFAYSDAEEIPSHRLP 354 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREI--LVIIDEVDEEGAI-GRSMADAPE 405 D VPE+ +R + M Q IS + ++VG+ LV+ + D E G++ AP+ Sbjct: 355 DHVPEDTAIKRRDYIMDRQNTISLDNNADRVGKTYTALVLGESGDPEYPYWGKTCLQAPD 414 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 +DG ++ GE ++ PG + RV V AD YDL Sbjct: 415 VDGVTFIQGE-DLGPGRLARVTVHGADVYDLLAE 447 >UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2 Tax=Mobiluncus mulieris RepID=C2KPF3_9ACTO Length = 552 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 133/488 (27%), Positives = 213/488 (43%), Gaps = 68/488 (13%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD------------ADMVIVNTCGF 55 V+LGC N DSER+ L G V S + AD+V++NTC Sbjct: 25 RTYHVVTLGCQMNEHDSERMAGLLDAAGMVPVSSVPEKAARATRAGDGGADVVVLNTCSV 84 Query: 56 IDSAVQESLEAIGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQV 109 ++A + +G+ + V GC +E I P V I G H+ + + Sbjct: 85 RENAANKLYGHLGQLAEVKRERPGMMIAVGGCFAQQEGSGILRRAPWVDAIFGTHNIDML 144 Query: 110 LEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRG 164 + + + L + + P H A++ IS GCN+ CTFCI+PS+RG Sbjct: 145 PVLLRRAELRQEAAVELEETLKVFPSMLPAHRTSPASAWVSISVGCNNTCTFCIVPSLRG 204 Query: 165 DLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCE 224 R E+L E + +V G E+ ++ Q+ ++YG NG + + L Sbjct: 205 RERDREPEEILRELQAVVAQGAVEVTLLGQNVNSYG----------NGFGRRGAFAQLLR 254 Query: 225 QLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSV 281 + + RL + P+P +DVI MAE ++P L PLQ S R+L+ M+R V Sbjct: 255 EAGRTPGLERLRFASPHPAAFTEDVIAAMAETPTVMPSLHFPLQSGSDRVLRQMRRSYRV 314 Query: 282 DRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEG 341 +R L + + R+ PE + + IVGFPGET+ DF+ L +++AR F YS G Sbjct: 315 ERFLRILGEVRDAIPEAAITTDVIVGFPGETDADFEATLRVMEQARFSAAFTFIYSRRPG 374 Query: 342 ADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVII-DEVDEEGAIGRSM 400 A DQVP EV ER+ R + LQ++IS E + G+ + V++ ++ ++ GR Sbjct: 375 TPAADREDQVPSEVVSERYQRLLALQERISTEENERLEGQTVEVLVGEQGTKDRETGRMS 434 Query: 401 ADAPEIDGAVYLNGETNV------------------------------KPGDILRVKVEH 430 A + + V+ ++ +PGD + V+V H Sbjct: 435 GRARD-NRLVHFALPPSLSQSDLQKGNGSAITHSGGKLMHPGGEPPMPRPGDFVTVQVTH 493 Query: 431 ADEYDLWG 438 + L Sbjct: 494 GAPHHLVA 501 >UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Aquificales RepID=RIMO_SULSY Length = 430 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 170/445 (38%), Positives = 258/445 (57%), Gaps = 33/445 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F+SLGCPKNLVD+E ++ +L E + ++AD++++NTCGFI+ A +ES+E I Sbjct: 5 KINFISLGCPKNLVDTEVLIGKLNQENISFTANPEEADVILINTCGFIEPAKEESIETIL 64 Query: 69 EA----LNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 EA N N K+IVTGCL + ++ + P+V + Q+ KPK N Sbjct: 65 EAVKLKQNSNKKIIVTGCLVERYKQELEKEIPEVDYFIDLKNQSQIPVLFDI---KPKEN 121 Query: 124 PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 + + TP+H AYLKISEGC+H C+FC IP++RG S+PI ++ EAK L + Sbjct: 122 T-------KRIISTPKHTAYLKISEGCDHTCSFCAIPNIRGKHRSKPIEALVEEAKYLAN 174 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPY 241 GVKE+ ++SQDTS YG D+ K + L + L K+ W RL+Y+YP Sbjct: 175 LGVKELNIVSQDTSYYGYDLYG----------KPMLFELLQHLEKIDGIKWIRLYYLYPS 224 Query: 242 PHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 +D + KIL Y+++P+QH+ +ILK M R + ++ + P++T+ Sbjct: 225 TVDEDFFKFIKGSEKILHYIEMPIQHSEDKILKDMMRGYRKKKLYQILEWKEKYTPDMTI 284 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPDQVPEEVKEER 359 RS+ IVG+P ETEEDF+ + +F++EA+ D +G F YS EG A D++P++ K R Sbjct: 285 RSSVIVGYPTETEEDFENMKNFIQEAQFDWLGVFVYSHEEGTPAYQKHKDKIPKKEKIRR 344 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNGET 416 N LQ+ I+ ++ + +G+E+ +IID EE IGRS A EIDGAVY+ Sbjct: 345 LNEISALQENITEQKNKSLIGKELDIIIDGFSEEWETLPIGRSYRSAFEIDGAVYVETTE 404 Query: 417 NVKPGDILRVKVEHA-DEYDLWGSR 440 V GDI++V+++ D+YD+ G Sbjct: 405 PVNVGDIIKVRIKDTIDKYDVVGEA 429 >UniRef50_B2A1N3 RNA modification enzyme, MiaB family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1N3_NATTJ Length = 446 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 116/455 (25%), Positives = 202/455 (44%), Gaps = 37/455 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVP----SYDDADMVIVNTCGFIDSAVQES 63 P++ F++ GC N DSE + + G+++ D+ D+ I+NTC A +++ Sbjct: 5 PRVKFITFGCKVNQYDSEALKELFQDRGFEISDWNPQELDNIDVAIINTCTVTHLADRKA 64 Query: 64 LEAIGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP- 120 + I + N + VTGC + Q + V + G ++E V + K Sbjct: 65 RQHIRKLKRRNPNCVIAVTGCYPQTDPQTVKALEGVDIVHGIEDRSGLVELVEQALSKEN 124 Query: 121 -----------KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + + + K R +LKI EGC+ C++CIIP RG L SR Sbjct: 125 IWQGAIHLHDSRPKGEFENLKIKNFKKHDRTRHFLKIQEGCDQFCSYCIIPYARGHLRSR 184 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS-- 227 P +V+SE K+ V G KEI++ + AYG + ++ +L +++ Sbjct: 185 PPEDVISEIKQAVSNGFKEIVLTGINLGAYGRE----------NSNLPNLATLLDKIIHL 234 Query: 228 KLGIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 K RL P ++ L+ KI +L IPLQ ILK M R S + Sbjct: 235 KGDYRIRLSSCEPQEITIGLLELVTNSEKICKHLHIPLQSGDNEILKAMNRDYSKEDYRK 294 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + RE P + + + IVGFPGE+ F+ +F+K+ + F+YSP + A Sbjct: 295 IVMAAREKSPSIAITTDIIVGFPGESANHFRNTKEFVKKIGFSDIHIFQYSPRKNTPAQE 354 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 DQV + K+ R +++ + +S ++ + + + V++++ +E+ A G S Sbjct: 355 FSDQVHSKEKKARSQELIEISRDLSRVYHEQFIDKTVPVLVEKHEEDVASGVSDTYL--- 411 Query: 407 DGAVYLNGETNVKP-GDILRVKVEHADEYDLWGSR 440 V N E+ + I +V++ ADE ++G Sbjct: 412 --KVTFNVESEINLYNKICQVQINSADEEMVYGEL 444 >UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostridiales RepID=A9KKS8_CLOPH Length = 466 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 111/439 (25%), Positives = 202/439 (46%), Gaps = 22/439 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F++LGC N ++E + G +V + +D+ +VNTC + A ++S + + Sbjct: 21 KKVAFLTLGCKVNSYETEAMQQLFLDAGATIVDFEELSDIYVVNTCTVTNIADRKSRQML 80 Query: 68 GEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 +A N N VI GC + V + G + +++ V Y + Sbjct: 81 HKAKKNNPNSVVIAVGCYVQAAKEALLEDDTVDLVIGNNKKNEIVSLVDEYYDNQSNYAV 140 Query: 126 LSLVPEQGVK------LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + + + + +T + AY+KI +GCN C++CIIP RG + SR E+ E Sbjct: 141 IDIDNDFEYEELAIAAVTEKTRAYIKIQDGCNQFCSYCIIPYARGRIRSRSEEEIKKEVM 200 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHN--GEPVKTSMVSLCEQLSKLGI--WTRL 235 RLV+ G +EI++ S+YG++ E + +++L LS++ RL Sbjct: 201 RLVENGYQEIVLTGIHLSSYGLETLSVKEQAALLPENGISPLMTLILSLSEIEGLNRIRL 260 Query: 236 HYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P ++ + +A K+ P+ + LQ L M R + D R + R Sbjct: 261 SSLEPRIITEEFVKTLARSKLCPHFHLSLQSGCKETLVRMNRKYTPDDYYKRCEIIRTYY 320 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 + + IVGFPGETEE+F+ FL++ + ++ FKYS +G A A+P+QVPE++ Sbjct: 321 ENPAITTDVIVGFPGETEEEFEDTKAFLEKVQFSQMHIFKYSKRKGTKAEAMPNQVPEQI 380 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDE----VDEEGAIGRSMADAPEIDGAVY 411 K +R ++++ A+ L +G +V+ +E D IG + Sbjct: 381 KSKRSENLFDSEKKMRAKYLDSFIGINEIVLTEEETMIEDTLYMIGHTTRY------VKV 434 Query: 412 LNGETNVKPGDILRVKVEH 430 +N+K +++ V++ Sbjct: 435 AIPVSNLKSNELVNVRITG 453 >UniRef50_C7MNG6 MiaB-like tRNA modifying enzyme YliG, TIGR01125 n=4 Tax=Coriobacteriaceae RepID=C7MNG6_CRYCD Length = 477 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 151/452 (33%), Positives = 241/452 (53%), Gaps = 27/452 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 + + P +++GC KN VDS ++ +L+ G+ V+ AD++IVNTC FI +A Sbjct: 37 VWGTSRIPNACIITMGCAKNEVDSAKMRGQLQEGGWSVINDPTAADVIIVNTCSFIQAAT 96 Query: 61 QESLEAIGEALNEN------GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV 113 +ESLE I E + K++V GC+ A+ D + + + + +L V Sbjct: 97 EESLETIFEVADLKRVRSGQAKIVVAGCMPARYGDDLSDSLTEASRFVPCSKEDDILSVV 156 Query: 114 HHYVPKPKHN--PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + +PK + P S +P P + AY+KIS+GC+ C++C IP +RG S Sbjct: 157 DELIDRPKSSYAPGASSIP-VVASSDPLYSAYVKISDGCDRFCSYCTIPFIRGRYHSFTF 215 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL-- 229 + +E R +D+G +EI++I+QDT +G D +++ L +L++L Sbjct: 216 EVIEAEVTRCIDSGAREIVLIAQDTGRWGQDFDQ----------PSTLACLMARLAELHP 265 Query: 230 GIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W R+ Y+ P D+++ MA I YLDIP QHA R+L M R GS I Sbjct: 266 DTWFRVMYLQPEGVTDELLAAMASHDNICSYLDIPFQHADERLLTSMNRRGSRAGYQTLI 325 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R P +TLR+T I G+PGE +EDF+ +L+F+ EA LD VG F YS EG A L Sbjct: 326 EHVRSCVPGITLRTTMIAGYPGERDEDFEEMLEFIDEADLDYVGVFAYSQEEGTRAARLS 385 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEID 407 DQV E +K+ER R + S R+ +++G + V++ +E+G IGR+ AP++D Sbjct: 386 DQVDEAIKQERAQRLRDVADAHSQMRVAKRIGSTMDVLVLGCEEDGRLIGRAQCQAPDVD 445 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 G VYL+ + + G+I++V + Y++ G Sbjct: 446 GVVYLD---HGQVGEIVQVDITDTFLYEMEGE 474 >UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MMU1_9FIRM Length = 446 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 159/451 (35%), Positives = 249/451 (55%), Gaps = 28/451 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G VSLGCPKN D+E +L ++ G+ +V AD+VI+NTCGFI SA +E++E I Sbjct: 6 KVGMVSLGCPKNQCDAELMLAKIAKAGFKIVNEAGLADVVIINTCGFIQSAKEEAIEEIM 65 Query: 69 EALNE-----NGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 EA++ N K+IVTGCL + + Q+ E P++ + G + ++E ++ + + Sbjct: 66 EAISRKNDGINKKIIVTGCLAERYQKQMDEEFPEIDAVVGIAKNDDIVEIINSVMLDRRV 125 Query: 123 NPFLSLV----PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F + ++ T HYAYL+I++GC+++C++C IP +RG + SR + ++ EA Sbjct: 126 ITFGDKLCHNMEGDKLQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKMENIIEEA 185 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 K+ + GVKE+++++QD +AYG+D+ K ++ L +QL K+ W RL Sbjct: 186 KKFAENGVKELVIVAQDVTAYGIDLYK----------KYALPDLLKQLCKIDGIKWIRLL 235 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++I + E K+L Y+DIP+QH + IL+ M R G + R Sbjct: 236 YCYPERMTDELIETIKTEDKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREI 295 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + LR+T I GFPGETEE F L +F+ + + +R+GCF YS E A +PDQV E Sbjct: 296 PGVVLRTTLITGFPGETEEQFSELAEFVNDIKFERLGCFAYSAEEDTPAAEMPDQVDEGE 355 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLN 413 ++ R + Q+ E +G V+ + D + GRSM APEIDG +Y Sbjct: 356 RQRRADIITGEQEIRMGEYYAGMIGNTYEVVCEGFDRYSDMYFGRSMHFAPEIDGMIYFT 415 Query: 414 GETN---VKPGDILRVKVEHADEYDLWGSRV 441 + + GD + VK+ E +L G RV Sbjct: 416 SAKDKGPLTIGDFVNVKITDVLENNLLGERV 446 >UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESOH Length = 466 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 111/463 (23%), Positives = 201/463 (43%), Gaps = 39/463 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + ++GC N+ DS ++ L G+ V + + AD+V VNTC A Q++ Sbjct: 1 MKRFYIHTIGCQMNVYDSSQLSAILTAMGHRSVNAPEQADLVFVNTCTIRAKAKQKATSF 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + V V GCL +E Q+ + P V + G H+ ++ H+ + Sbjct: 61 VGRLAAMKRARPDMIVGVGGCLAQEEGRQLLDAFPCVDIVFGTHALGRLPGHIQAVAHQG 120 Query: 121 KHNPFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + + + ++ I GC++ CT+C++P +RG SR Sbjct: 121 DRIVDVEMTAAIDESVHALQGPDSSGVTGFITIMRGCDNFCTYCVVPYVRGRETSRAPEH 180 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 +L E + V G++EI ++ Q+ ++YG + S L +++++ Sbjct: 181 ILDEIRARVAGGLREITLLGQNVNSYGQ-----------KEGLCSFADLLARVNEIDGLH 229 Query: 234 RLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ + +P ++ K+ ++ +P Q S +LK M R + L ++ Sbjct: 230 RIRFTTSHPKDLSPELAAAFTSLDKLCSHVHLPAQSGSDAVLKRMNRRYTRQAYLEKLHW 289 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE P + L + IVGFPGETE+DF LD +++ R D + F YS A A A + Sbjct: 290 LREAQPGMALSTDIIVGFPGETEQDFLQTLDLIEKVRYDSIFAFMYSDRPLAPARAFDGK 349 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-----------GAIGRS 399 V E K++R ++LQ +I+AE+ + GR V+++ + GR+ Sbjct: 350 VDEAEKQQRIYALLELQNRITAEKNRALEGRVEQVLVEGKSKSSGRNDITADTVQWTGRT 409 Query: 400 MADAPEIDGAVY-LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + L V PG ++RV++ + L G V Sbjct: 410 TCNRVANFTVPRELASGNAVGPGAMVRVEIMSGLAHSLSGIAV 452 >UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DI62_9BACT Length = 469 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 161/470 (34%), Positives = 252/470 (53%), Gaps = 44/470 (9%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI SLGC KNLVD+E +L + G + +DAD+ +VNTC FI+ A QES AI Sbjct: 6 KICVSSLGCAKNLVDTEVMLGSMAKSGVVITGDLNDADIFVVNTCSFIEGARQESNAAIM 65 Query: 69 EAL-----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV--------- 113 +A+ ++ KV+V GCL + ++ ++ HP V G + V Sbjct: 66 DAITWKKKRKSRKVVVAGCLPQRSPEETKKNHPDVDLFLGLDDVASIGTMVNNLLRKMPT 125 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + K +L + +TP HYAY+KISEGCNH+C+FC IP+ RG L SR I Sbjct: 126 MNTIQKDDLPVYLYDENTPRLLVTPSHYAYIKISEGCNHKCSFCAIPTFRGKLRSRTIES 185 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 ++ EA+ L++ GV+EI+++SQD++ YG D+K + ++ ++L W Sbjct: 186 IVKEAQALLNRGVREIILVSQDSTGYGSDLKDGSST-------AELLKALDKLDCDEYWV 238 Query: 234 RLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL Y+YP D++I A+ K I Y+D+PLQH + ++LK M+R + R + ++R Sbjct: 239 RLLYLYPTTVTDELIETFAQSKHIAKYIDMPLQHGADKVLKTMRRGITRKRTEILLDKFR 298 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P + +R+T +VG PGE EE+FQ LDF+KE + DR+G F YS E A +L D Sbjct: 299 KAMPGVVMRTTLLVGHPGEGEEEFQECLDFVKEQQFDRLGVFTYSHEENTHARSLEDFTD 358 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILV---------------------IIDEVD 391 E R ++ M +QQ+IS E+ Q G+++ V I++E Sbjct: 359 PETSAARRDQIMAVQQEISYEKNQRFAGQDLRVIVDEAFLKTDIDPNDERFDEAIMEEAG 418 Query: 392 EEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + R+ DAP++D V+ + + + L V +E A +YDL+G V Sbjct: 419 DYYVLSRTEGDAPDVDNLVHFSADEAILDQQFLTVHIEEATDYDLYGQLV 468 >UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EE1 Length = 456 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 108/449 (24%), Positives = 212/449 (47%), Gaps = 34/449 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK S GC +++ D E+I L G ++ADM+I+NTC ++A + Sbjct: 20 PKAYVRSFGCQQSVSDGEKIKGLLGLMGCSFTEDENEADMIILNTCAVRENAEDRVFGIV 79 Query: 68 GEALN-----ENGKVIVTGCLGAK---EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + + + GC+ A+ ++I++ +P+V + G + + + + Sbjct: 80 GSMKKLKELKPSLIIGIAGCMTAQSHVAEKIKKSYPQVDFVMGTSAISSLPHLLLECLNG 139 Query: 120 PKHNPFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K + +S + + A + + GCN+ CT+CI+P +RG SR +++ Sbjct: 140 AKFSADISEYDDFSAVVPQIRDSSFKASVPVMFGCNNFCTYCIVPYVRGRERSRQPQDII 199 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWT 233 +E + LV G KEI+++ Q+ ++YG D+++ + L +L K+ W Sbjct: 200 NEVRGLVRDGYKEIMLLGQNVNSYGKDLENGM----------TFPQLLRELDKIEGDFWI 249 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P + + + K+ +L +P+Q S +L+ M R +V++ + + R Sbjct: 250 RFMSSHPKDATKKLADAIFDCTKVAKHLHLPVQSGSNDVLRRMNRRYTVEKYMETVDYIR 309 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P+ +L + IVGFP E +EDF+ LD ++ + D + F YS G A + D + Sbjct: 310 QRDPDFSLTTDLIVGFPDEKDEDFEATLDIIRRVKYDNIYSFIYSKRTGTKAAEMDDPIT 369 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEIDGA 409 +E K R R +++Q++IS+E + +GR + V+ D ++ G+S Sbjct: 370 DEEKGMRMRRLLEVQREISSEHYKRFIGRTMRVLADGKAKKREGWLTGKSSEFI-----I 424 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V G++++ G + V++ A + + G Sbjct: 425 VEFEGDSSL-IGQFVDVEITDAMNWAVSG 452 >UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXK7_HALOH Length = 438 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 24/438 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + F +LGC N ++E ++ GY VV D AD+ I+N+C + A ++S + + Sbjct: 5 VAFHTLGCKVNHYETEAMMGIFEEAGYKVVDFDDRADVYIINSCTVTNEAARKSRQLARK 64 Query: 70 ALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 A +N + +V GC + + + G + +++ V K + Sbjct: 65 ARRKNPEAVVALVGCYAQVSPDEVKKIDAIDLVLGSDRRKDIVKLVEEVRTGGKEVTDVK 124 Query: 128 LVPE-------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + K+ AY+KI EGCN C++CIIP RG + SR V+ E +R Sbjct: 125 DFKKLTTYEDLNINKVKETTRAYIKIEEGCNQFCSYCIIPYARGPVRSRKEESVIQEVER 184 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 LV AGVKEI++ AYG+D E ++V L + L K+ RL + Sbjct: 185 LVRAGVKEIVLTGTHLGAYGLD----------ENNDKALVELIQNLVKVKGLARIRLSSL 234 Query: 239 YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 DD+I +M +E K+ P+L +PLQ S ILK MKRP +V+ + + R+I + Sbjct: 235 EVTEVNDDLIRIMGSEDKVCPHLHLPLQSGSNTILKKMKRPYTVEEFKETVDKIRKIIED 294 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + + IVGFPGE +++F + +KE R+ F +S +G A + +QVP +VK+ Sbjct: 295 IAITTDIIVGFPGEGQKEFNESYNTVKELGFSRLHVFPFSIRQGTPAARMKNQVPGDVKK 354 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 E + +L +++ E + G VII+ D + + V + + Sbjct: 355 EYSKKMRELNKKLMLEYQKRFWGHLRDVIIE--DNRDSRTNLLTGVTGNYIKVMIENADD 412 Query: 418 VKPGDILRVKVEHADEYD 435 G + +V+++ A ++ Sbjct: 413 SLRGKMCKVRLDKAYNHE 430 >UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Clostridiales RepID=D1PL31_9FIRM Length = 447 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 111/449 (24%), Positives = 203/449 (45%), Gaps = 34/449 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG-- 68 S GC +N+ D E+I L+ G+ + + +DAD+++ NTC + A Q IG Sbjct: 13 FVRSYGCQQNVNDGEKIRGVLQDVGFGICDTLEDADLILFNTCAVREHAEQRVFGNIGAL 72 Query: 69 -EALNENGKVI--VTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + +N ++I V GC+ + +++R+ +P V + G +++ + + + K Sbjct: 73 KKLKEQNPRLIIGVCGCMAQQPHIVEKLRQSYPYVDLVFGVDGIDRLPAMLAERLRRGKR 132 Query: 123 -----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++V E ++ A+L I GC++ CT+CI+P +RG SR +L+E Sbjct: 133 YLETPEQRNAVVEEMPIRRDSGFRAWLPIMYGCDNFCTYCIVPYVRGRERSREPDAILAE 192 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 + L+ G KEI ++ Q+ ++YG + + L L + R Sbjct: 193 FRDLITKGYKEITLLGQNVNSYGKGLGN----------PIDFADLLNLLCAVPGDYQIRF 242 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P +I +A + + ++ +P+Q S R+L+ M R +V++ L + R Sbjct: 243 MTSHPKDASRKLIDTIAAQPHMCKHIHLPVQSGSNRLLQQMNRHYTVEQYLDLVDYARNK 302 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P +T S IVGFPGETEEDF+ L+ +++ ++ F YS G A +PD Sbjct: 303 IPGVTFSSDIIVGFPGETEEDFEATLELVRKVGYMQLFTFIYSKRNGTPAAKMPDPTTHA 362 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMA--DAPEIDGAVYL 412 K R R ++ Q +I+ + G+ + V+++ A GR+ + + V Sbjct: 363 EKAARMERLLRTQDEIAFAAIASMAGQNVRVLVE------AAGRTPGTVNGRLDNNLVVE 416 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 + G RV + + L G V Sbjct: 417 FPAPEMLIGQWARVNLTGSRAALLTGELV 445 >UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Thermotogaceae RepID=RIMO_FERNB Length = 431 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 154/444 (34%), Positives = 244/444 (54%), Gaps = 29/444 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ + LGC KN D L+ G++VV +DAD V+++TCGFI A QES++ I Sbjct: 5 KLYVIVLGCAKNEADFSLFKYHLKQLGHEVVDDVEDADGVVIDTCGFIVDAKQESIDTIL 64 Query: 69 E-----ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITG---PHSYEQVLEHVHHYVPK 119 E + KV VTGCL + + + P+V G P + + + Y+ Sbjct: 65 EFASIKKQKPDFKVYVTGCLVQRYPKDLPLEIPEVDGWFGVIPPKNLAESINKTKKYITD 124 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 P +++ +G + YAY+KI++GC+ CTFC IP +G VSR + ++ E + Sbjct: 125 P-----VAVYEFEGRVDSDLPYAYVKIADGCDRACTFCTIPKFKGGFVSRKLEDIEKEVR 179 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L++ G KEI++++QDT+ YGVD+ K + L ++++ + W R+ Y Sbjct: 180 YLIENGKKEIVLVAQDTTGYGVDLYG----------KQMLPELLKRINDIDGNFWIRVMY 229 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 ++P D+++ + K++ Y DIP+QH+S ILKLM R S + R + P+ Sbjct: 230 MHPDHVTDEILKGFSYEKVVKYFDIPIQHSSDNILKLMGRTKSTKELEELFDKIRSLYPQ 289 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 LR++ IVGFPGET++DF+ L+DF++ DR+G F YS E A + LP++V + + Sbjct: 290 AVLRTSIIVGFPGETKDDFEQLIDFIRTIEFDRLGGFVYSDEEDAASYNLPNKVSLKTAQ 349 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 +R + M++Q +IS R Q VG+ I V+ +E IGRS DAPE+DG V++ G Sbjct: 350 KRLDTLMEVQAEISFLRNQRLVGKVIDVLFEEEVNGVIIGRSYMDAPEVDGNVFVKGHGI 409 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 + G +VK+ AD YDL G V Sbjct: 410 NRFG---KVKITEADTYDLEGELV 430 >UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Bulleidia extructa W1219 RepID=D2MLZ6_9FIRM Length = 480 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 116/448 (25%), Positives = 210/448 (46%), Gaps = 28/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N+ D E + L G+ + AD+++ NTC +A ++ + I Sbjct: 43 KKYYVKTYGCQANVRDGESLSGMLEMMGFTYAEVPEKADVILFNTCAIRRAAEEKVMAEI 102 Query: 68 GEAL-----NENGKVIVTGCLGAKED---QIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G N ++ GC+ ++D ++ + HP++ I G H+ + + + K Sbjct: 103 GNLKYLKKEKPNIIFVLCGCMAQEKDVVEELLQKHPQLDLIFGTHNLYRFPALLQEVMVK 162 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + V+ P ++ I GC+ CT+CI+P RG SR + ++ Sbjct: 163 KIQKVEVYSQEGEVVESLPVKRSMSSKGFVNIMYGCDKFCTYCIVPYTRGKERSRRMKDI 222 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 L E L +G KE++++ Q+ +AYG D+ G L +S GI Sbjct: 223 LEEVSALKKSGRKEVVLLGQNVNAYGKDLHMEDG----------FTDLLRAISDTGIERI 272 Query: 234 RLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R + +P + +I LMAE K I+P+L P+Q S ILK M R +V+ ++ + Sbjct: 273 RFYTSHPRDYRSSLIDLMAERKNIMPFLHFPVQSGSNEILKRMARGYTVEHYISLYDEMM 332 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P +T + IVGFPGE++EDF+ ++ ++ + D F YSP G A ++ D + Sbjct: 333 KKIPNMTFTTDIIVGFPGESDEDFEKTMNLVEHCQYDMAYTFLYSPRVGTPAASMTDSIS 392 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +EVK+ R R Q ++I+A++ + +GR + V+ + + ++ + A E + V Sbjct: 393 KEVKKARLQRLNQRLREIAAKKNKVYLGRIVRVLCEGISKKNE--KIYAGYTEDNKLVNF 450 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSR 440 + N +I+ V++ Y L G Sbjct: 451 SCPWNCMD-EIVDVEITETHSYTLNGRV 477 >UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Acidobacteria RepID=MIAB_SOLUE Length = 445 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 123/446 (27%), Positives = 205/446 (45%), Gaps = 26/446 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC N DSE+++ L EGY+ V + + A++V NTC D A Q+ + Sbjct: 7 KTFYIETFGCQMNAHDSEKVVGTLLAEGYEQVATPEAAELVFYNTCSIRDKAEQKVFNRL 66 Query: 68 GEALNE--NGKV-IVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 E GK+ V GC+ +E ++I + P V + G SY ++ E + + Sbjct: 67 QNFKREGMKGKIFGVLGCVAQQEGEKIFDRAPHVSLVAGSASYTRLPEMLVQLEAGNRRV 126 Query: 124 PFLSLVPEQGV-----KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 LSL E+ + H AYL I EGC+ C +C++P RG SR V++EA Sbjct: 127 TGLSLDTEETFDTPFTRRDNPHRAYLTIIEGCDKACAYCVVPFTRGPERSRTSESVMAEA 186 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + L + G E+ ++ Q+ ++Y + P +L +++++ R+ Y Sbjct: 187 RGLTEKGYTEVQLLGQNVNSY----------RDPSPAGWDFATLLAKVAEIPGMRRVRYT 236 Query: 239 YPYP--HVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P V ++ M A I ++ +P+Q S ++L M R + D L RI + Sbjct: 237 TSHPRDFVRPIVDAMDANEAICDHIHLPVQSGSSKVLAAMDRLYTRDEYLRRIDWIKSAK 296 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 +L + I+GFPGET+ DF+ LD L E + D + FKYSP A A+ D++PEE Sbjct: 297 RRYSLTTDIIIGFPGETDADFEQTLDLLDEVQYDSLFSFKYSPRPNTSALAMEDRIPEEE 356 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLN 413 K+ R + Q+ I R E +G V+++ ++ IGR+ + + + Sbjct: 357 KQRRLLTLQEKQRAIQIRRNAEMIGSIQEVLVEGRNQALGQWIGRTTCNRTL--NFSHPD 414 Query: 414 GETNVKPGDILRVKVEHADEYDLWGS 439 N G L V+V + L G Sbjct: 415 TNGNELVGKYLPVRVTRSGPNSLVGE 440 >UniRef50_Q1JYQ2 MiaB-like tRNA modifying enzyme n=2 Tax=Desulfuromonadales RepID=Q1JYQ2_DESAC Length = 428 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 103/438 (23%), Positives = 196/438 (44%), Gaps = 21/438 (4%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + V+LGC N +S + LR +GY +VP A++VIVNTC + +S + + Sbjct: 4 VSIVTLGCKANQFESAAMERMLREQGYQIVPFEQGAELVIVNTCTVTSATDAQSRKLVRR 63 Query: 70 ALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 A NG +++VTGC + Q P V+ + G + +++ + P+ + S Sbjct: 64 ARRLNGQCRIVVTGCYAQIQPQQIAELPGVMYVIGNSEKQDLIDILCQEGPQVQVGDIAS 123 Query: 128 LV---PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + + A+++I GCN C++CIIP RG S V+ + +LV Sbjct: 124 QQQCPDLKIASFSEHSRAFVQIQSGCNAFCSYCIIPYARGRSRSVNTSAVVDQVNQLVAG 183 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV 244 G +E+++ YG D+ + + + +L Q G RL + P Sbjct: 184 GYREVVLTGIHIGNYGQDLTPQCTLTD------LLNALLTQTD--GCRIRLGSIEPQEVN 235 Query: 245 DDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRST 303 + +I + +I P+ IPLQ +L+ M R S+ + ++ + P +++ Sbjct: 236 EALIDCVQHSSRICPHFHIPLQSGCDDVLQQMNRHYSIRQFHDTVELLCQKIPRVSIGID 295 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRF 363 I GFPGETE + +F+ + + F +S G A +PDQ+P ++ ++R Sbjct: 296 VISGFPGETEAQHRHTCEFISSLPVHYLHVFPFSARPGTPAATMPDQIPGDIAKQRAAEL 355 Query: 364 MQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNGETNVKPGD 422 L ++ +++ ++ +GR + V+++ + G S V + GE G+ Sbjct: 356 RVLAEEKASQYREQFIGRLVDVVLESRTKNNQWQGTSAEYLT-----VLVAGEQGA-AGE 409 Query: 423 ILRVKVEHADEYDLWGSR 440 ++ V++ + L G+ Sbjct: 410 LVSVEIVGVSQNFLVGTL 427 >UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Bdellovibrio bacteriovorus RepID=MIAB_BDEBA Length = 453 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 118/449 (26%), Positives = 210/449 (46%), Gaps = 35/449 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 + + GC N+ D+ER+ L + + V A ++I+N+C + V + +G Sbjct: 23 VYISTYGCQMNVNDTERMYALLEMQNFVPVTDPKKASLIIINSCSVREKPVHKVYSEVGT 82 Query: 69 ----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH- 122 + N K+ V GC+G +E + + + P + + G + + + V + Sbjct: 83 YKYMKRKNPELKIGVGGCVGQQEKENLMKTQPMIDFVFGTDQIDSLPQLVAKSFAGERRL 142 Query: 123 --NPFLSLVPE--QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + F P + + P Y+ I++GC++ CTFC++P RG SRP+ +L++ Sbjct: 143 VNSRFEHRSPYHIETLVRNPGVATYVNITKGCDNFCTFCVVPYTRGREKSRPVQHILTDI 202 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + LV GVKE+ ++ Q+ ++Y D L +++K R+ Y Sbjct: 203 RHLVKRGVKEVTLLGQNVNSYQGDEG------------IDFADLLAKVAKETDVERIRYT 250 Query: 239 YPYP--HVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P ++ +MAE KI+ Y+ +P Q S ++L+ M R + + L RI ++ Sbjct: 251 TSHPKDFNQKLVDVMAEHSNKIMEYIHLPFQAGSTKVLERMNRNYTREEYLERIAMIQKG 310 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + + IVGFPGETEEDFQ L+ + E + + F YSP A DQ+PE+ Sbjct: 311 LPNVCFSTDIIVGFPGETEEDFQDTLNMVTEVGFETIFAFSYSPRPFTKAAKFEDQLPED 370 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPEIDGAVYL 412 VK ER NR + + ++ ER++ G + V+++ VD + GRS + V+ Sbjct: 371 VKNERLNRLFDVHEAMAFERVKRYEGTTMKVLVENVDRDHGKMQGRSTGNK-----LVHF 425 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ G + VK+ A G + Sbjct: 426 LGTADL-IGKTVDVKITKAFPAVFRGEMI 453 >UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKT1_9BACT Length = 436 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 116/446 (26%), Positives = 211/446 (47%), Gaps = 36/446 (8%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + + GC N DS+RI L G + +AD+VIVNTC + A Q++L ++G Sbjct: 6 LYLETYGCQMNEYDSDRIQNAL---GASITEDPKEADIVIVNTCAIREKADQKALSSLGR 62 Query: 70 -----ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 A N V V+GC+ + + P + + GP + Q+ + + K Sbjct: 63 FKHLKAKNPELIVGVSGCVAQLYGEDLIRRIPHLDFVLGPRAIPQLPQLIEEIKEKKSRP 122 Query: 124 PFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 S ++ + P H A++ I +GCN +C +CI+P++RG V+RPI ++++EA Sbjct: 123 VETSFDIQEPFDVLPYHQEGKPAAFVSIQQGCNKKCAYCIVPTVRGSEVNRPIEDIIAEA 182 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + L+ GVKEI +I Q +++ + L L +L R+ + Sbjct: 183 RYLIAKGVKEITLIGQTVNSW-------------KLGGLKFGDLLRVLGELDGLERIRFT 229 Query: 239 --YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 YP ++ MA+ K+ ++ +P+Q S ++L+LM R S + + + R+ Sbjct: 230 TSYPRDITKKMVEAMADVPKVCRHIHLPVQSGSDKVLRLMNRTYSRSWYIDSVNRLRDAM 289 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL---PDQVP 352 P + + S IVGFPGETE+DF+ + ++E D FKYSP G L ++V Sbjct: 290 PNIAVSSDIIVGFPGETEDDFEQTMSLVEEVGFDSSFSFKYSPRPGTVGEELWRSGERVE 349 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 + +R R + Q+ I+ E+ +++G+ V++++ + + ++ E + V Sbjct: 350 DSTAGQRLARLQEYQRAITLEKNAQRIGKSEQVLVEDASRKDSSW--LSGRTEHNRIVNF 407 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 GE + G ++ V++ L G Sbjct: 408 PGEKEL-IGKMVDVRITEGLANSLRG 432 >UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XWL0_9BACT Length = 450 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 156/447 (34%), Positives = 249/447 (55%), Gaps = 31/447 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYD--DADMVIVNTCGFIDSAVQESL 64 + +I +++GC KNLVDSE ++ + G++ + + ++ ++NTCGFI++A +ES+ Sbjct: 21 KNQIDIITMGCSKNLVDSELLMKQFEANGFECTHDTEQPEGEIAVINTCGFIETAKEESI 80 Query: 65 EAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 I E +N K+ V GCL + D++ + P+V + G +Y+Q+L + Sbjct: 81 NTILEFVNRKEKGQLNKLFVMGCLSQRYKDELEKEIPEVDKFYGKFNYKQLLTDLGKA-- 138 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ TPRHYAY+KI+EGC+ C +C IP + G SR + ++L E Sbjct: 139 ------DVTSCNGVRHLTTPRHYAYIKIAEGCDRHCAYCAIPLITGKHRSRKMEDILQEV 192 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 ++LV GVKE VI Q+ + YGVD+ K + L +++ + W RLH Sbjct: 193 EQLVAQGVKEFQVIEQELTYYGVDLDG----------KHHITELISRMADIKGVEWIRLH 242 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++ ++A + + YLDI QH S +L M R S + IK+ R Sbjct: 243 YAYPNQFPFDLLDVIAQKPNVCKYLDIAFQHISDHMLDRMHRHVSKQETINLIKEIRSRV 302 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD-ANALPDQVPEE 354 P + LR+T +VGFPGET+EDF+ L DF++E R +R+G F YS EG A D VPEE Sbjct: 303 PSIHLRTTLLVGFPGETDEDFEELKDFVREVRFERMGAFAYSREEGTYSAEHYEDDVPEE 362 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN- 413 VK++R + M +QQ+IS E + K+G+ VIID + + IGR+ +P++D V ++ Sbjct: 363 VKQQRLDELMAIQQEISTELEETKIGQTFKVIIDREEGDYYIGRTEFCSPDVDPEVLISI 422 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSR 440 GE ++ G+ V + +DE+DL+G Sbjct: 423 GEVPLRVGEFYNVYITDSDEFDLYGEV 449 >UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP4_9CHLO Length = 456 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 162/464 (34%), Positives = 255/464 (54%), Gaps = 43/464 (9%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--- 68 VSLGCPKN VD E +L +L G+D++ ++DAD +IVNTCGF++ A ES++AI Sbjct: 1 MVSLGCPKNTVDGEVMLGDLFANGFDIIDEHEDADAIIVNTCGFVEDAKNESVDAILAAA 60 Query: 69 ------EALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYV---- 117 E + KVIVTGCL + +++ + P+V + G +Y+ + + + Sbjct: 61 AMKAEQEQGGKKKKVIVTGCLAQRYAEELADEMPEVDVVMGFENYKDLPNTLGEQLGVET 120 Query: 118 -------PKPKHNPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + + + P + +LTP+HYAYL+++EGC+H+CTFC IP RG Sbjct: 121 GAAADGAKRGRVRVGTASPPFRPEALRKRLTPQHYAYLRVAEGCDHKCTFCAIPGFRGKF 180 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 S+P ++ EAK L D G +E+ +I++DT+ +G+D+K G + L E L Sbjct: 181 RSKPWDPIIEEAKALADTGARELCLIAEDTNQWGMDLKASDG--------RGLAELLEAL 232 Query: 227 SKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 + + W R+ Y YP D +I +A+ ++ Y+DIPLQH + L M RP Sbjct: 233 AVIDGVEWIRILYAYPSYFSDPLIDAIADIPQVAKYIDIPLQHITNLSLLRMNRP-PRQH 291 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 + + R+ P L LR+TFI GFPGETEE+ + L+ F +E + +R+G F YS +G Sbjct: 292 TEDLLYKLRDRIPGLALRTTFISGFPGETEEEHEDLMRFCREFKFERLGAFAYSEEDGTP 351 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMA 401 A PDQV + V++ R ++ + QQQIS + +VGRE+ VIID + E GR+ Sbjct: 352 AATYPDQVEQAVRDLRRDQLIAQQQQISEDFAASRVGREVDVIIDGYNPEFDAWTGRTSL 411 Query: 402 DAPEIDGAVYL----NGETNVKPGDILRVKVEHADEYDLWGSRV 441 +AP+ID V++ G+ ++ G + R K+ +DL + V Sbjct: 412 EAPDIDPIVFVADPTGGQRALEMGQMRRCKIVGTSLFDLEANLV 455 >UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=40 Tax=cellular organisms RepID=MIAB_SYNS9 Length = 472 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 122/463 (26%), Positives = 205/463 (44%), Gaps = 28/463 (6%) Query: 1 MSKVTPQPK---------IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVN 51 + +TP K + GC N DSER+ L + GY + DAD+V+ N Sbjct: 6 LKTLTPPSKQGLDQNRRSYWITTFGCQMNKADSERMAGILESMGYCEATAELDADLVLYN 65 Query: 52 TCGFIDSAVQESLEAIGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHS 105 TC D+A Q+ +G N N ++V GC+ +E + + P++ + GP Sbjct: 66 TCTIRDNAEQKVYSYLGRQAQRKRDNPNLTLVVAGCVAQQEGESLLRRVPELDLVMGPQH 125 Query: 106 YEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYA---YLKISEGCNHRCTFCIIPSM 162 ++ + + + + R A ++ + GCN RCT+C++PS+ Sbjct: 126 ANRLETLLQQVDSGQQVVATEEHHILEDITTARRDSAICGWVNVIYGCNERCTYCVVPSV 185 Query: 163 RGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSL 222 RG SR + E + L G KEI ++ Q+ AYG D+ T E + L Sbjct: 186 RGQEQSRRPEAIRLEMEGLAAQGFKEITLLGQNIDAYGRDLPGITAEGRREHT---LTDL 242 Query: 223 CEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPG 279 + + RL + +P + +I A+ K+ + IP Q +LK M R Sbjct: 243 LHHVHDVEGIERLRFATSHPRYFTERLIDACADLSKVCEHFHIPFQSGDNALLKSMARGY 302 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 +V+R I + R+ P+ ++ + IVGFPGET+ ++ LD + E D+V YSP Sbjct: 303 TVERYRRIIDRIRDRMPDASISADVIVGFPGETDAQYRRTLDLIDEIAFDQVNTAAYSPR 362 Query: 340 EGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAI 396 A +Q+PE VK ER L ++ + ER GR V+ + + D E + Sbjct: 363 PNTPAATWDNQLPESVKVERLKEINALVERNARERNIRYQGRTEEVLAEGINPKDPEQLM 422 Query: 397 GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 GR+ + A +G +PGD++ V+++ + L G+ Sbjct: 423 GRTRTNRLTFFSATSPDGHL-YQPGDLVNVRIDAVRSFSLSGT 464 >UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae RepID=CK5P1_ARATH Length = 640 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 128/494 (25%), Positives = 221/494 (44%), Gaps = 55/494 (11%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAV 60 S + + +I + GC N+ D E +L ++ GY +VV + A+++ VNTC ++A Sbjct: 123 SDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAE 182 Query: 61 QESLEAI----------------GEALN-ENGKVIVTGCLGAK-EDQIREVHPKVLEITG 102 Q + + G A + + KV+V GC+ + +D+I + V + G Sbjct: 183 QRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCG 242 Query: 103 PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTF 156 P +Y + + K L + E ++P A++ + GCN+ C F Sbjct: 243 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAF 302 Query: 157 CIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE--- 213 CI+P RG SRP+ ++ E L ++GVKE+ ++ Q+ ++Y D R N E Sbjct: 303 CIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESGANWEYSE 362 Query: 214 ---------PVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAEG-KILPYLD 261 + L ++LS R + P+P D+++ LM + I + Sbjct: 363 GFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIH 422 Query: 262 IPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLD 321 +P Q + RIL+ M+R + + L +K+ R I P++ + S FI GF GETEE+ Q L Sbjct: 423 LPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLS 482 Query: 322 FLKEARLDRVGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVG 380 ++ D F YS E A+ D VPEEVK+ R + ++ + +VG Sbjct: 483 LVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVG 542 Query: 381 REILVIIDEVDEEGA----IGRSMAD-------APEIDGAVYLNGE---TNVKPGDILRV 426 LV+++ ++ IG++ P D A L+G+ N GD + V Sbjct: 543 STQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFVEV 602 Query: 427 KVEHADEYDLWGSR 440 ++E + L+G Sbjct: 603 QIEKSTRASLFGEA 616 >UniRef50_C0WDC4 RNA modification enzyme n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDC4_9FIRM Length = 435 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 111/442 (25%), Positives = 191/442 (43%), Gaps = 25/442 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 I F +LGC N D+ + R GY++VP + +D+ ++NTC + +S I Sbjct: 5 ISFYTLGCKVNQSDTASMEKLFREAGYEIVPFGEASDICLINTCVVTNMGQGKSRRMIRR 64 Query: 70 ALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + + K ++VTGC + V + G +++E V + + P Sbjct: 65 TIKRDPKPLIVVTGCYPQTAPEEVAALEGVDLLVGNRDRARIVELVEERLGERDAAPVND 124 Query: 128 LVPEQ---------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ R A+LKI EGC+ C++CIIP RG L SRP+ + E Sbjct: 125 VLDLPVGSEFEDLAASVDDSRDRAFLKIQEGCDQYCSYCIIPYARGHLRSRPLSSIRREV 184 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + L + G KE++++ YG + + + S+ +LC RL + Sbjct: 185 EHLTEEGYKEVVLLGIHLGCYGKETANGERLSDAVSAALSVPALC--------RLRLGSL 236 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +++ LM E + +L +PLQ +ILK M RP R I + R P+ Sbjct: 237 ESVEVQPELLRLMQEDPRFCCHLHLPLQSGCDKILKAMNRPYDTARFKELIDRIRAAVPD 296 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + + IVGFPGETE DF L F + ++ F YS +G A DQ+ + KE Sbjct: 297 VAITTDIIVGFPGETEADFAQTLTFAEACGFAKIHIFPYSKRKGTPAAERKDQLSNKEKE 356 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 +R +R + ++ + + +GR+ V+ +++ +G VYL E + Sbjct: 357 DRVHRLEAVDRKGNEIFRKTLIGRQYPVLWEQIGRKGL----WEGLTPNYVRVYLKSEED 412 Query: 418 VKPGDILRVKVEHADEYDLWGS 439 + G + V V + + Sbjct: 413 L-TGTLTTVAVTGLFDDGVLAE 433 >UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHG4_9BACT Length = 427 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 113/442 (25%), Positives = 211/442 (47%), Gaps = 29/442 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N+ DSE I + L G+ V +AD+++ NTC A + L I Sbjct: 1 MKFYIETYGCQMNVADSELIASILTKAGHQEVTQISEADLLLFNTCSVRGHAEERVLGRI 60 Query: 68 -----GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + N N K+ V GC+ + ++I + V + G Y+ + + ++ K Sbjct: 61 QSENHRKKENPNLKIGVVGCMAQRLGEEINKEKLTVDFVIGVDQYQHLPDILNEETEKTI 120 Query: 122 HNPFLSLVPEQGVKLT--PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 +G++ + AY+ I GCN+ C++CI+P +RG SR +++ E Sbjct: 121 LTDLDETQLYKGIQPAYHNDYCAYITIMRGCNNFCSYCIVPYVRGRERSRSWQDIIEETI 180 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 + G K+I ++ Q+ ++Y NGE ++ + +L ++ R + Sbjct: 181 SAGNQGKKDITLLGQNVNSY----------LNGEVNFPRLLIILNELDEI-YRLRFITSH 229 Query: 240 PYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P +++I ++A KI ++ +P+Q S ILK M R +V ++ +++ + P + Sbjct: 230 PKDLSEELIEVLANSAKICEHIHLPVQSGSDNILKAMNRNYTVQHYISLVEKLHKFIPNI 289 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + + GFPGETE DFQ L +K D C+K+SP G A L +QVPE + Sbjct: 290 AITTDIMTGFPGETENDFQDTLSLMKTIEFDDAFCYKFSPRPGTTAETLSNQVPEAERLA 349 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPEIDGAVYLNGE 415 R + + LQ++IS ++ +E++GR++ V I+ + + +G++ + AV E Sbjct: 350 RLQQMIDLQRKISLKKNREQIGRKVEVYIESFSKKSRKMVLGKTR----DFKTAVLPGTE 405 Query: 416 TNVKPGDILRVKVEHADEYDLW 437 + G + +++V+ A L Sbjct: 406 DDF--GTLKQIEVKDATASTLI 425 >UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Campylobacterales RepID=MIAB_ARCB4 Length = 436 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 121/447 (27%), Positives = 213/447 (47%), Gaps = 21/447 (4%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTE-GYDVVPSYDDADMVIVNTCGFIDSAVQE 62 ++ K+ +LGC N DS+ I EL GY + +DAD++I+NTC + VQ+ Sbjct: 1 MSSNKKLFIQTLGCQMNDTDSQHIQAELEKHKGYVTTQNIEDADLIIINTCSVRERPVQK 60 Query: 63 SLEAIG---EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 IG + E K+ V GC + I + P V + G + ++ + V Sbjct: 61 LFSEIGQFNKKKKEGAKIGVCGCTASHLGQDIIKRAPYVDFVVGARNISKIKDVVDVKGA 120 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 E T ++ A + IS GC+ +CT+CI+PS RG+ +S P ++ + Sbjct: 121 VEVSIDNDESTYEFSTAKTNKYRASVNISVGCDKKCTYCIVPSTRGEEISIPPEMIVEQV 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 ++ V+ G E++++ Q+ ++YG + K + L + +SK+ R+ + Sbjct: 181 RKSVEQGAVEVMLLGQNVNSYGRKFSDKRE-------KYTFTKLLQDVSKIDGLERIRFT 233 Query: 239 YPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 P+P D+ I A KI + +PLQ S +LK MKR S + L R + RE+ Sbjct: 234 SPHPLHMDDEFIEEFAKNPKISKCIHMPLQSGSTSVLKAMKRGYSKEWFLNRASKMRELV 293 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-VPEE 354 P L + + IV FPGET+EDF LD +++ + D++ FKYSP G +A L D+ +P+E Sbjct: 294 PNLRITTDIIVAFPGETQEDFLDTLDVVEQVKFDQIFNFKYSPRPGTEALNLKDKELPDE 353 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 + +R ++L ++ E + + +G + ++++ + G + + V+ G Sbjct: 354 IGSQRLIDLIELHKRYLEESMPKLIGETLNILVESLKPNGEVC----GYTDNYLQVFAKG 409 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + G + VK+ L G V Sbjct: 410 SDELL-GKFVNVKITDVTRTSLKGEVV 435 >UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Opitutaceae RepID=MIAB_OPITP Length = 480 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 123/480 (25%), Positives = 210/480 (43%), Gaps = 58/480 (12%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ + GC N DSE + LR GY +V +D D++++NTC D+A Q+++ Sbjct: 1 MNRVHIKTYGCQMNERDSEAVAAMLRARGYRIVADENDCDILLLNTCSVRDAAEQKAIGK 60 Query: 67 IGEALNENGK-----VIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK- 119 G K + + GC+ + + + P V I G + QV ++ + Sbjct: 61 AGYLQQRKKKQPDFVLGILGCMAQNRGASLLDQLPDVDLIVGTQKFHQVPGYLDNLRAAR 120 Query: 120 ----PKHNPFLSLVPEQGVKLT------------------------------PRHYAYLK 145 P + + E G + T P+ A++ Sbjct: 121 DAGVPIGETIVDIGEEAGSQNTIKDHLLPQDSDSDSQPSTLNSQLRGAAAPPPQITAFVS 180 Query: 146 ISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKH 205 I +GCN C FCI+P RGD SRP+ +++ E ++L GV+E+ ++ Q ++YG Sbjct: 181 IQQGCNMDCAFCIVPKTRGDERSRPMDDIVRECEQLAARGVREVTLLGQIVTSYGR---- 236 Query: 206 RTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDI 262 + + V L E++ L R+ + P+P DD++ K+ Y+ + Sbjct: 237 --RDYTHTNGISPFVQLLERVHALDGIERIRFTSPHPRGFKDDLVAAYGRLPKLCGYVHL 294 Query: 263 PLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDF 322 PLQ S RIL+ M RP + +R + R + ++ + IVGFPGET+EDF+ + Sbjct: 295 PLQSGSNRILRAMNRPYTRERYREIVDALRAVRSDMYFSTDVIVGFPGETDEDFEQTREL 354 Query: 323 LKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGRE 382 + D FKYS G A DQVPE+VKE+R ++L +Q S R + Sbjct: 355 FEACNYDMAYVFKYSVRTGTPAAERGDQVPEDVKEQRNQLLLELLRQNSERRNALLLDTV 414 Query: 383 ILVIIDEVDEEG--AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+++ D+ G GR+ + V + T G ++ +++ A L+G Sbjct: 415 EEVLVEGPDKTGQRFTGRTRGNR------VCIFEATPDLVGRLVSLRITRASVSTLYGEL 468 >UniRef50_C9M5C2 RNA modification enzyme, MiaB-family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C2_9BACT Length = 431 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 162/446 (36%), Positives = 247/446 (55%), Gaps = 32/446 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 V+LGCPKN DSER+ + G+ + + D++++NTCGFI AV+E + Sbjct: 1 MKTAHIVTLGCPKNEADSERLAGIMARAGFSLTDKSEGVDLILLNTCGFIQPAVEEGIST 60 Query: 67 IG-----EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + +A + + V GC+ + D +++ P V +++++E + Sbjct: 61 MLDMETMKARGDVKALAVVGCMVNRYGDDLKKEFPTVDYWARSEQWQELIESMGATYLGD 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + TP YLKISEGCN +C++C IP +RG L SRPI E++ EA R Sbjct: 121 GR---------HILTRTPWTR-YLKISEGCNCQCSYCAIPGIRGRLCSRPIDELVQEAGR 170 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL---GIWTRLHY 237 LV G KE+ ++ Q+ + YG D+ K S+ L +L K +W RL Y Sbjct: 171 LVSEGAKELCLVGQELTEYGADLYK----------KRSLPKLLTELEKTLPQSVWLRLFY 220 Query: 238 VYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 ++P ++ +A K I+P+LD+P+QH ++L+ M RP + + K REI P Sbjct: 221 LHPSHLDTALLEQIASSKQIVPWLDVPIQHIDNQVLERMARPPVETKIRSLFKIAREINP 280 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + R+T +VGFPGET F LLDF+++ + DR+G F YSP +G A + PDQ+PE+ K Sbjct: 281 DFAFRTTLMVGFPGETRRQFDRLLDFVEDIQFDRLGAFTYSPEDGTKAASFPDQIPEDEK 340 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA-IGRSMADAPEIDGAVYLNGE 415 R++ M LQQ IS R VGR + V+++EVD++G GRS DAPEIDGAV L+G Sbjct: 341 GRRYDELMSLQQSISRRRQALFVGRRLDVLVEEVDQDGTRWGRSYRDAPEIDGAVALSGS 400 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 + +PGDI+ ++ + EYDL+G V Sbjct: 401 AS-QPGDIVSALIDDSSEYDLFGRPV 425 >UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridiales RepID=C7H7X5_9FIRM Length = 460 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 115/446 (25%), Positives = 210/446 (47%), Gaps = 30/446 (6%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG-- 68 S GC +N+ D ERI L GY + +DAD+++ NTC + A Q +G Sbjct: 27 FVHSYGCQQNVNDGERIKGVLVDIGYGLCDKPEDADLILFNTCAVREHAEQRVFGNVGAL 86 Query: 69 EALNENGK---VIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + L E + + + GC+ ++ +++R+ +P V + G + + + + + K K Sbjct: 87 KGLKEKKRGLMIGLCGCMANQKHVVEKLRKSYPYVDLVFGVDGIDTLPQLIAQKLQKHKR 146 Query: 123 NPFLS-----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 +V ++ A+L I GC++ CT+CI+P +RG SR G++L+E Sbjct: 147 VLMEPAQRPVIVENIPIRRESEFRAWLPIMYGCDNFCTYCIVPYVRGREKSRKPGDILAE 206 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 + LV+AG KEI ++ Q+ ++YG G + L L + R Sbjct: 207 FRGLVEAGYKEITLLGQNVNSYGK----------GLEEQVDFADLLNLLCAVPGDYQIRF 256 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P +I +A + + +L +P+Q S +LK M R ++ + + I+ R+ Sbjct: 257 MTSHPKDASHKLIDTIAAQPHLCKHLHLPVQCGSDELLKKMNRHYTIGQYMELIEYARKK 316 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P +T S IVGFPGETEEDFQ L+ +K+ ++ F YS G A +PD P Sbjct: 317 VPGITFSSDIIVGFPGETEEDFQDTLELVKKVGYMQLFTFIYSKRTGTKAAEMPDPTPRA 376 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K +R R +++Q +I+ + ++++VG+ + V+++ +++ + + V Sbjct: 377 EKTDRMTRLLKVQDEIAMDLVRQQVGQTVRVLVEGYGRSDG---TLSGRLDNNLTVEFAA 433 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + + G +V + A L G Sbjct: 434 DPAL-MGSYAQVHLTGARATVLLGEL 458 >UniRef50_B5EE49 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Geobacter RepID=MIAB_GEOBB Length = 441 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 108/455 (23%), Positives = 202/455 (44%), Gaps = 33/455 (7%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + K+ + GC N+ DSE+I+T ++ GY DAD+V++NTC +A Q Sbjct: 1 MNQAKKLYLETFGCQMNVSDSEKIVTLMKGMGYQQTQDPVDADLVLLNTCSIRATAEQRV 60 Query: 64 LEAIGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYV 117 +G+ + V GC+ +E + + + P V + G H+ + V Sbjct: 61 YGHLGKFKSIKKTKPGLIIGVGGCVAQQEGEKLLKKAPFVNLVFGTHNLHLLQGMVAAAE 120 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYA------YLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + L E+ L P A ++ + +GC++ C +CI+P +RG +SR Sbjct: 121 EGKRSSQTDFLDDEKRFDLFPHSEAEGGVTRFVTVMQGCDNFCAYCIVPHVRGREISRSA 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +V+ E + L D+GV E+ ++ Q+ ++Y + +P + L ++++ Sbjct: 181 AKVVEEVRALADSGVTEVTLLGQNVNSY----------CSKQPGEPDFPDLLRLVAQVDG 230 Query: 232 WTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + +P +I A+ K+ P++ +P Q S R+L+ M R + + LA++ Sbjct: 231 IERIRFTTSHPKDMSPRLIECFADLPKLAPHIHLPAQSGSDRVLERMNRGYTAQQYLAKV 290 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 +E CP + IVGFPGE E FQ + +++ + + F YS G A Sbjct: 291 AALKEACPAIQFTGDMIVGFPGEDEAAFQDTMALMEQVQYADLFSFIYSARPGTKAAEYA 350 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEI 406 D K+ R R Q++ + R + G V+++ + G GR+ + Sbjct: 351 DDATRAEKQGRLERLQAAQKKTTLARNRSLEGTVQKVLVEGLSSTGDSLFGRTGGNR--- 407 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + G+ ++ G +L VK+ + L G V Sbjct: 408 --GTVMAGDPSL-AGRVLDVKIVEGLQTLLKGEIV 439 >UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=27 Tax=Clostridiales RepID=MIAB_CLOPH Length = 456 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 116/450 (25%), Positives = 215/450 (47%), Gaps = 36/450 (8%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 + GC N DSE++ L T GY ++AD V+ NTC ++A IG Sbjct: 21 FNVQTFGCQMNAKDSEKLAGILETIGYVE-SDSEEADFVVYNTCTVRENANTRVYGRIGF 79 Query: 69 ----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + N + ++ + GC+ + ++I++ + V + G H+ ++ E ++ K Sbjct: 80 LGNLKKKNPHMRIALCGCMMQESHVVEKIKKSYRFVDIVFGTHNIFKLAELIYARHTTKK 139 Query: 122 HNPFLSLVPEQGVKLTP-----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + ++ V+ P + A + I GCN+ C++CI+P +RG SR +++ Sbjct: 140 MVIDIWKETDKIVEELPSEQKYKFKAGVNIMYGCNNFCSYCIVPYVRGRERSRNPEDIIK 199 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E K+LV GV E++++ Q+ ++YG + S L + + ++ R+ Sbjct: 200 EIKQLVSKGVVEVMLLGQNVNSYGKTLDE----------PVSFAQLLQMVEQVEGLKRIR 249 Query: 237 YVYPYPH--VDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 ++ P+P +DVI +M K I ++ +P+Q S +L M R + + L + + + Sbjct: 250 FMTPHPKDLSNDVIEVMKNSKKICNHIHLPVQSGSTELLMKMNRKYTKEDYLNLVDRIKM 309 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P ++L + IVGFPGETEEDF LD +++ D F YS G A + +Q+PE Sbjct: 310 AMPNISLTTDIIVGFPGETEEDFLDTLDVVRKVGYDSAYTFIYSKRSGTPAATMENQIPE 369 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAV 410 EV ER+ R + ++ S++ ++ G+ V+++EV+E+ GR + V Sbjct: 370 EVANERFQRLLTTIRESSSKISKDDEGKIAEVLVEEVNEQDNSLMTGRLSNNV-----LV 424 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + G + G+I+ VK+ + G Sbjct: 425 HFKGTKEL-IGNIVSVKLSECKGFYYMGEM 453 >UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLB8_FIBSS Length = 440 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 123/458 (26%), Positives = 216/458 (47%), Gaps = 41/458 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K + GC N DS I EL G + +DAD++IVNTC + A + ++ Sbjct: 1 MKKYHLATYGCQMNEYDSAMIAQELDMCGCVETNNQEDADIIIVNTCSVREKAEETAIVN 60 Query: 67 I-----GEALNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I N + KV+V GC+ + ++ + V I GP Y ++ E + P Sbjct: 61 ISKLKYLRKKNPDVKVVVCGCMAKNRGPELLKRLKNVNYIVGPDQYRKIPELLFGDAQSP 120 Query: 121 KHNPFLSLVPEQG---------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 H + ++ KL A++ I GCN RC++CI+P +RG R + Sbjct: 121 LHKTHHKMFIDEDRDENYLGEYAKLQNDVSAFVAIQRGCNKRCSYCIVPYLRGPEKYRDM 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +VL+E KR D G+ E++++ Q +AY + +L ++S++G Sbjct: 181 DDVLTEVKRAADKGITEVMLLGQTVNAY-------------KTPNADFTTLLTKVSEIGG 227 Query: 232 WTRLHYVYPYP--HVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + P+P + +++I L+ K+ Y IPLQ S ILK M+R ++++ + I Sbjct: 228 IKRIRFTSPHPRHYTNELIDVLLNNPKVCHYAHIPLQSGSDAILKKMRRQHNMEQYMTVI 287 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 +Q R P + + I GF GET+EDF+ + + + D F YSP +G ++ Sbjct: 288 EQLRSKDPYYAISTDVICGFVGETDEDFEQTIKAFEACQFDTAYMFIYSPRKGTESFNEA 347 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPE 405 + + E K R +R ++LQ I+ +R Q +GR ++++ D+ +G++ + Sbjct: 348 EILTPEEKSARHSRLVELQNAITLKRNQMMIGRTEEILVEHGSTRDKTELVGKT-----D 402 Query: 406 IDGAVYLNGETN--VKPGDILRVKVEHADEYDLWGSRV 441 V E +KPGD ++VK++ + L G+ V Sbjct: 403 NFKKVIFKPEEGRIIKPGDYVKVKIDDIRGWTLRGTLV 440 >UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6X2_ATOPD Length = 468 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 148/444 (33%), Positives = 231/444 (52%), Gaps = 15/444 (3%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA--- 66 + +++LGC KN VD++R+ L G+ V + AD+ I+NTC F+ SA +ES+E Sbjct: 16 VLYITLGCAKNEVDTDRMRALLLASGFGEVADPESADVAIINTCSFLASATEESIETTLE 75 Query: 67 IGEALNENGK---VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 I E +E + +I+ GC+ ++ ++ E P+V + ++ V + P+ Sbjct: 76 IAEGASEGVRKLPIIMCGCVPSRYGAELNEQLPEVAAFVPADQEDGIVSIVADVLNIPEP 135 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + + ++ A++KISEGC+ C FC IP +RG SRP E+L E K L+ Sbjct: 136 TQSI-VAAHGMLRTIDGASAFVKISEGCDRFCAFCAIPYIRGHYHSRPAEEILQEVKELM 194 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 D GV+E+++I QDT +G D+ K M + E + W R+ Y+ P Sbjct: 195 DGGVREVILIGQDTGIWGSDMPDTEDGQTPTLAK-LMQKVAEVVRSYKGWIRVLYLQPEG 253 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++I + + ++LPY+DIP+QH + RILK M R GS+ + R P + LR Sbjct: 254 MTDELISTIRDTPEVLPYIDIPIQHCNERILKRMGRSGSIQELRKLFDRLRSEIPGMVLR 313 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 +T + GFPGET+E+ L DF++E D F YSP EG + DQVP+EVK ER Sbjct: 314 TTGMCGFPGETDEESDELYDFIQEQEFDYTSVFTYSPEEGTLGAKMSDQVPDEVKIERTQ 373 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEG----AIGRSMADAPEIDGAVYLNGETN 417 R + L +Q+ VG VIID ++E IG + AP+ DGAV++ E Sbjct: 374 RLLDLVEQLGFAATARHVGERCEVIIDGIEESDEGTELIGHTWFQAPDCDGAVHI-AEGE 432 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 GDI+ + + Y++ G V Sbjct: 433 ASVGDIVLCDLVDSFCYEMIGEIV 456 >UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0W4_ACIC5 Length = 448 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 29/452 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + + GC N+ DSE+++ L+ +GY V AD+++ NTC D A Q+ Sbjct: 10 SSGKTFYLETFGCQMNVHDSEKVIGTLQQQGYTQVEEEAAADLILYNTCSIRDKAEQKVF 69 Query: 65 EAIGEALN---ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + + + V GC+ +E + I E P V ++G SY ++ E + Sbjct: 70 NRLNDYKKLHAQGKRFGVLGCVAQQEGEKIFERAPYVSLVSGSASYRKLPEMLVQLEAGA 129 Query: 121 KHNPFLSL------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 L + + H Y+ I EGC+ C +C++P RG SR V Sbjct: 130 SRITGLDDRQTEETFETEFTARSNAHRGYITIIEGCDKFCAYCVVPYTRGKERSRKSSSV 189 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L+EA+R+ +AG EI ++ Q+ ++Y + K S L + ++ R Sbjct: 190 LAEARRMAEAGYTEIQLLGQNVNSY-----------HDPEGKKSFAELLAAVGEVPGIVR 238 Query: 235 LHYVYPYP--HVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P D++ + A + ++ +P+Q S R+L+LM+R + ++ L +I Sbjct: 239 VRFTTSHPRDFTRDIVEAIDAVPALCDHVHLPIQSGSSRVLQLMQREYTREQYLEKISWI 298 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 + +++ + IVGFPGET +DF+ + E + D + FKYSP A + D + Sbjct: 299 KTARRPISMTTDMIVGFPGETPDDFEETITLAAEVQYDGIFAFKYSPRPNTPAIHMSDSI 358 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGA 409 PEE K R + Q++I VG + V+++ + IGR+ + Sbjct: 359 PEEEKSMRLQILLDRQREIQRINYARHVGEVMDVMVEGHNHARGQVIGRTSQNKTL---N 415 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + PG L+V+V + L G V Sbjct: 416 FTTSQPILPAPGSYLKVRVTRSLPNSLVGEAV 447 >UniRef50_D1U9N9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Desulfovibrio RepID=D1U9N9_9DELT Length = 443 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 164/457 (35%), Positives = 237/457 (51%), Gaps = 35/457 (7%) Query: 1 MSKVT-PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 M+ + P K+ VSLGCPKNLVD+ER+L L + AD+ ++NTCGFI A Sbjct: 1 MAHHSVPAVKVFTVSLGCPKNLVDTERLLGALGPA-MLPADTVAQADLALINTCGFIQPA 59 Query: 60 VQESLEAIGEALN----------ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQ 108 V+ES+ AI +A+ V V GCL ++ Q +RE P+V Sbjct: 60 VEESVAAILDAVRDADETRESTGRRPLVAVAGCLVSRYGQDLREELPEVDLWLSTDQLHL 119 Query: 109 VLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + + P T YAYLKISEGC+H C FC IPS+RG S Sbjct: 120 WPVMIAQAITHARPIP-----NAPRRLSTGPAYAYLKISEGCSHNCHFCTIPSIRGPHRS 174 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP+ +L EA+ L + V EI+++ QD+++YG D+ + + L Sbjct: 175 RPVEALLDEARTLAAS-VPEIIIVGQDSTSYGSDLGGDNTIKHLVSGLADLPGL------ 227 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W RL Y+YP DD++ + +LPY DIPLQHA P +L M RP + + Sbjct: 228 --AWLRLMYLYPAGLTDDLLGFLKSIGDPLLPYFDIPLQHAHPDVLASMGRPFARNP-RK 284 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 I + R + LR+TFIVG+PGET+E F L+ F++E R +G F Y P +G A A Sbjct: 285 VIDRVRAHFSDAALRTTFIVGYPGETDEHFDHLMRFVEETRFHHLGVFPYWPEDGTPAAA 344 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADA 403 LPD V ++ K +R + M LQ IS E ++ VG+ + V+I+ E GR+ A Sbjct: 345 LPDPVDDQTKLDRRDALMALQADISREIMESHVGQTLPVLIEAPSPEWPGLFTGRTWFQA 404 Query: 404 PEIDGAVYL--NGETNVKPGDILRVKVEHADEYDLWG 438 PE+DG Y+ +T + PG I+ ++++ AD YDL G Sbjct: 405 PEVDGTTYVSTPPDTTLTPGTIVTIEIDKADTYDLSG 441 >UniRef50_C0GKG0 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKG0_9FIRM Length = 440 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 170/446 (38%), Positives = 245/446 (54%), Gaps = 26/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ VSLGC KNLVDSE +L L +G+ + + A ++I+NTCGFID+A +ES+ I Sbjct: 5 KVAVVSLGCAKNLVDSETMLGLLNEDGFTLTTDPEKAHVIIINTCGFIDAAKEESIAKIL 64 Query: 69 EA---LNENGKVIVT-GCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 E +N ++++ GC+ + D++ + P+V + G + + + K Sbjct: 65 EMAAYKEKNCRLLLAAGCMAQRFADELLDELPEVDGLFGTNDVHGAAVAIRRGLAGEKVS 124 Query: 122 --HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F + TP H AYLKI+EGC++RCT+C IP++RG SR V+SEA+ Sbjct: 125 FTQGEFAGSDDAPRLLSTPSHTAYLKIAEGCDNRCTYCAIPAIRGPYQSRDGQAVVSEAQ 184 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L GVKE+ +I+QD + YG D K + L +L+ + W RL Y Sbjct: 185 SLAAGGVKELNLIAQDITLYGTD----------RTGKAQLPKLLGELAAIDGVHWIRLLY 234 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP +I +A E K+ YLD+PLQH S +IL+ M R + D+ L I+ R P Sbjct: 235 AYPERLDQRIIEAVAREEKVCKYLDLPLQHGSDKILRRMGRKTTADKILKLIETLRREVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + LRS+FI GFPGE EE+F +L FLKEA+LDRVG F YS EG A A +QVP EVK Sbjct: 295 GIVLRSSFIAGFPGEGEEEFGEMLAFLKEAQLDRVGFFAYSREEGTPAAAYSNQVPAEVK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDGAVYL- 412 EER R + LQ IS ++ Q+ VG+ + ++D D + RS APE+DG + + Sbjct: 355 EERVRRAVALQSAISEKKQQQLVGKTVTAMVDGSSAQDPSILLARSYMQAPEVDGYIRIQ 414 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 N + + G +L V + D YDL Sbjct: 415 NSDKKAQKGGLLPVTITGFDGYDLLA 440 >UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYG6_9DELT Length = 486 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 115/463 (24%), Positives = 200/463 (43%), Gaps = 49/463 (10%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P++ + GC N D+ +L LR +G+ V S +AD+V+VNTC + A Sbjct: 36 PRVYMETFGCQMNEADTALVLGRLRQDGWVRVTSPAEADLVLVNTCAVREKAEDRVYGRT 95 Query: 68 GEA-----LNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + N + + +TGC+ D++ P + + GP SY + + + Sbjct: 96 TQLLDHRNRNPDLVIGITGCMAEHLRDKLETRAPHIQLVAGPDSYRNIAALARKAITGER 155 Query: 122 HNPFLSLVPEQGVKLTPRHY------------------AYLKISEGCNHRCTFCIIPSMR 163 E L P Y+ I GC+ CTFC++P R Sbjct: 156 AVDVHLDKAEVYEGLDPVIRSPGDDGSEAATSRDDGVSGYVTIQRGCDKFCTFCVVPFTR 215 Query: 164 GDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC 223 G P EVL +A+RL +AG +E+ ++ Q ++Y S L Sbjct: 216 GRERGVPPREVLRQARRLAEAGYRELTLLGQTVNSY-------------AWEDVSFAELL 262 Query: 224 EQLSKLGIWTRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGS 280 ++ + R+ + PYP D++I ++A E K+ PY+ +P+Q + +L+ M+R + Sbjct: 263 RAVAAVEGIERIRFTSPYPVDFSDELIEVLATEPKVCPYVHMPVQAGADVVLERMRRGYT 322 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 + +++ R P + + + +VGF GETE D L ++E + D F YS E Sbjct: 323 LADYRELVRKLRAAVPHIAISTDIMVGFCGETEADHAETLALMEEVQFDFAFMFAYSDRE 382 Query: 341 GADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIG 397 A+ L D VP+E K R ++LQ++ + RL +VG+ V++ + G +G Sbjct: 383 ITYASKKLVDDVPQETKLRRLREVIELQEKHTRARLAARVGQRDRVLVVNTSKRGDKLLG 442 Query: 398 RSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 R+ P + G PG+ + V + + L+G Sbjct: 443 RT----PTFQKVLLPLG--CAAPGEFVDVTITGTTGHSLFGEL 479 >UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKI3_9ACTN Length = 460 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 145/447 (32%), Positives = 236/447 (52%), Gaps = 15/447 (3%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + I FV+LGC KN VD++R+ L +G+ V + ++AD+V++NTC F+ SA +ES+E Sbjct: 12 KKNILFVTLGCAKNEVDTDRMRALLFAQGFSEVDTPNEADIVLINTCSFLASATEESIET 71 Query: 67 ---IGEALNENGK---VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 I E + + +++ GC+ ++ ++ E P+V + ++E V + Sbjct: 72 TLQIAEGASHGVRSLPIVMCGCVPSRYGSKLPEELPEVAAFVRADEEDGIVEVVSEVL-G 130 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + P + ++ AY+KIS+GC+ C FC IP +RG SRP E+LSE Sbjct: 131 IERTPQSVIAAHGMLRTVEGASAYVKISDGCDRFCAFCAIPYIRGHYQSRPADEILSEVS 190 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 L++ GV+EI++I QDT +G D+ T + M + + + W R+ Y+ Sbjct: 191 SLMEGGVREIILIGQDTGIWGNDIAE-TNTGEVPTLAWLMRQVAQVVRPYNGWVRVLYLQ 249 Query: 240 PYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D++I + + + LPY+DIP+QH S R+L M R GS + + R P + Sbjct: 250 PEGMTDELISTIRDTPECLPYIDIPIQHCSERVLARMGRSGSAPELRSLFDRLRREIPGM 309 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 LR+T + GFPGETEE+ L DF++E D F YSP EG ++P+QVP+E+K E Sbjct: 310 VLRTTGMCGFPGETEEESDELYDFIQEQEFDYTSVFTYSPEEGTAGASMPNQVPDEIKME 369 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG----AIGRSMADAPEIDGAVYLNG 414 R R + L +++ VG VIID +++ IG + AP+ DGAV++ Sbjct: 370 RTQRLIDLVEELGFAGTARHVGERCEVIIDGIEDTDEGFELIGHAWFQAPDCDGAVHI-A 428 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + GDI+ + + Y++ G V Sbjct: 429 NGEARVGDIVLCDLVDSFCYEIIGEIV 455 >UniRef50_A0LIM0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RIMO_SYNFM Length = 444 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 156/449 (34%), Positives = 237/449 (52%), Gaps = 26/449 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 VSLGC KNLVDSE ++++L GY++ P A +++VNTCGF++SAV+ES++ Sbjct: 3 SKSAALVSLGCAKNLVDSESMVSQLIELGYEMTPEVSQAALILVNTCGFLESAVRESIDT 62 Query: 67 IGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + K++V GC+ + ++ + P+V G + + + Sbjct: 63 VLQLAGYKASGSCEKLVVAGCMVQRYGKKLLGLLPEVDLFLGTSHCHALKSFIRDHEAGS 122 Query: 121 KHNPFLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 ++ + R AY+KI+EGC +RC FC+IP +RG SR ++L Sbjct: 123 SERLRIAFPDHVDNGADRHLVEGRSSAYVKIAEGCGNRCAFCLIPRLRGPYRSRRAVDIL 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 EA RLV G KE+ +++QDT+A+G D E S++ E++ KL W RL Sbjct: 183 REAHRLVACGAKELNIVAQDTTAFGSDRGE-------EHALVSLLESLEEIEKLE-WVRL 234 Query: 236 HYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP ++I M++ K++PYLDIPLQH PRIL M R G+ + R Sbjct: 235 LYAYPDRITPELIRTMSQSRKVVPYLDIPLQHCVPRILASMGRSGTDPE--RIVDAIRSG 292 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + LR++ IVGFPGETE DFQ L F++ + +G F +SP G A +PD+VP + Sbjct: 293 IPGVALRTSLIVGFPGETEADFQALTAFVECTGFEHLGVFAFSPEPGTRAARMPDRVPPD 352 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVY 411 V +ER ++LQ+ IS RL+ VGR + V+++ E GR APE DG V Sbjct: 353 VAQERRKVLLELQRGISRRRLESLVGRVLPVLVEGFHPETDLLLTGRLAVQAPEADGTVL 412 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSR 440 + PG+I+R +V A +YD+ Sbjct: 413 ITDGIG-TPGEIMRCRVTAAHDYDVEAEL 440 >UniRef50_A1APR6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=5 Tax=Desulfuromonadales RepID=MIAB_PELPD Length = 440 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 106/446 (23%), Positives = 201/446 (45%), Gaps = 29/446 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI-- 67 + + GC N+ DSERILT L GY A ++++NTC A ++ + Sbjct: 6 VYIETFGCQMNVNDSERILTMLADIGYVPTQEPARARLILLNTCSVRAGAEEKVYRRLEN 65 Query: 68 ---GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + N + V GC+ +E + + E PK+ + G H+ + + V + + Sbjct: 66 LVVLKRHNSRLIIGVGGCVAQQEGEALLERIPKLDLVFGTHNLHLLNDMVLAAERGERKS 125 Query: 124 PFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + +Q + L P R +++ + +GC + C++CI+P +RG VSR G++L E Sbjct: 126 ETSFIDNDQRLDLFPPIRGTARISSFVTVMQGCENYCSYCIVPYVRGPEVSRRSGDILRE 185 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 ++L D GV+E+ ++ Q+ ++YG+ + S L ++ + R+ + Sbjct: 186 VRQLADQGVREVALLGQNVNSYGL----------KSSAEPSFAELIRLVAAVDGIRRIRF 235 Query: 238 VYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P ++I + + L +P Q S +L M R + + L +++ R + Sbjct: 236 FTSHPKDMSPELIACFGDLPALCSQLHLPAQSGSDNVLARMGRGYTREEYLEKVRALRAV 295 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ IVGFPGETEE+FQ L ++E R + F YSP G A L D + Sbjct: 296 RPDIVFTGDMIVGFPGETEEEFQETLSLMEEVRYIDLFSFAYSPRPGTRAAELADDLSRG 355 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K+ R R LQ++ + E +G V+++ + ++ + V +G Sbjct: 356 EKQSRLERLQALQKRTTMEINDVLLGTRQTVLVEREGKRPGQ---ISGKADNGRTVNFSG 412 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + ++ G + +++ + L G Sbjct: 413 DRSL-IGTFVDLRIIQVFQNSLLGEL 437 >UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransferase n=3 Tax=Planctomycetaceae RepID=A6CGG9_9PLAN Length = 510 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 129/477 (27%), Positives = 218/477 (45%), Gaps = 59/477 (12%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ ++GC N++DSE ++ +LR GY++ + +A+ ++ NTC + A + ++G Sbjct: 33 KLYIETVGCQMNMLDSELVVADLRKRGYELTQNVKEAETILFNTCSVREHAEHKIYSSLG 92 Query: 69 EA-----LNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 N + V GC+ K+ + I + P+V + G QV + Sbjct: 93 RLRYGARKNPKKVIGVMGCMAQKDQKLIFQKAPQVDFVVGTGQLAQVASLIDKARVNHSQ 152 Query: 123 NP----------------------FLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCII 159 N F S P + ++ P Y A+++I GC+ C++C++ Sbjct: 153 NVRSRELAVGLGRKDGKLAEITNSFQSYDPLRDPEMRPSPYQAFVRIMIGCDKFCSYCVV 212 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 PS RG SR E+LSE K L D GVKE+ ++ Q ++Y H + + Sbjct: 213 PSTRGPEQSRSPREILSEVKVLADQGVKEVTLLGQTVNSY---------KHTQDGKLFRL 263 Query: 220 VSLCEQLSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMK 276 L + + +R+ +V YP D++ + + K YL +PLQH +LK+MK Sbjct: 264 SDLLYLIHDVEGISRIKFVTSYPKDMTTDLLEAIRDLPKATRYLHVPLQHGCNDVLKVMK 323 Query: 277 RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKY 336 R +V+ +++ EI P ++ S FIVG PGETEE Q+ L+ ++E R FKY Sbjct: 324 RGYTVEDYREMMQRVNEILPGCSVSSDFIVGHPGETEESHQLSLESIREFRFKNSFIFKY 383 Query: 337 SPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--- 392 S G A D++P+ VK+ R N + +Q QIS E E +G+++ V+++ + Sbjct: 384 SERPGTKAAERFKDEIPDAVKKRRNNEMLAVQNQISEEDNAEFIGKQVEVLVEGPSKSAQ 443 Query: 393 --------EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 E +GRS D V +G + G + V++ L G V Sbjct: 444 KAIEESLAEQLVGRSNCDR-----IVVFDGNPRL-AGSLATVEIFDVTPTTLIGGIV 494 >UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C4FYU3_ABIDE Length = 515 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 124/464 (26%), Positives = 215/464 (46%), Gaps = 46/464 (9%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL-- 71 + GC N DSE+I L G++ D VI+NTC ++A Q+ +G Sbjct: 60 TFGCQMNFRDSEKIAGILEKIGFENTEDKSP-DFVILNTCTIRENADQKVYGNLGYLKKL 118 Query: 72 ---NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVP------- 118 N N + + GC+ + ++RE + + I G H+ ++ E V Sbjct: 119 KELNPNMIIALCGCMMQETTVVQKLRESYSFIDLIYGTHNIYKLAELVFAMFALKSYAAH 178 Query: 119 ---------KPKHNPFLSLVPEQGVKLTP-------RHYAYLKISEGCNHRCTFCIIPSM 162 K KH+ + + + + A + I+ GC++ CT+CI+P + Sbjct: 179 HPVKKNGKYKIKHSMLVDIWKDTDKIVEDLPDERKYSFKASVNITYGCDNFCTYCIVPYV 238 Query: 163 RGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSL 222 RG SR G+++ E K L DAGV EI+++ Q+ ++YG ++ G + +L Sbjct: 239 RGRERSRRPGDIVKEVKCLADAGVIEIMLLGQNVNSYGKGLEGEKGEP------VTFANL 292 Query: 223 CEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPG 279 + K+ R+ ++ P+P D++I ++A+ KI ++ +P Q S +L+ M R Sbjct: 293 LRMVEKVEGIKRIRFMTPHPKDFSDELIEVIADSEKICKHIHLPFQAGSNNVLRRMNRRY 352 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 + + L + + P++ L + IVGFPGETEEDF+ LD +KE R F+YS Sbjct: 353 TKESYLELAGKIKTRIPDIALTTDIIVGFPGETEEDFEDTLDVVKEVRYQSAYMFEYSKR 412 Query: 340 EGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--- 396 G A + DQV E + R+ R + + ++ KVG V+ +EV+ E + Sbjct: 413 TGTPAATMEDQVDAEAVKRRFKRLQDTVAEYADDKFGNKVGCMAEVLAEEVNSEEPLIIT 472 Query: 397 GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 GR M+D + V + + + G +L+VK+ + L G Sbjct: 473 GR-MSDNTLVHFKVPTDNKEDY-IGKLLKVKITENCRFYLMGEL 514 >UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=C4Z0P5_EUBE2 Length = 446 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 116/409 (28%), Positives = 197/409 (48%), Gaps = 28/409 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD--ADMVIVNTCGFIDSAVQESLE 65 K+ SLGC N ++E + LR EGY++VP +D AD+ I+NTC + A ++S + Sbjct: 6 KKVAIHSLGCKVNSYEAESMEIMLRDEGYEIVPFSEDVQADIYIINTCSVTNIADRKSRQ 65 Query: 66 AIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + +A N V+ GC + + V I G + ++E ++ Y Sbjct: 66 MLHKAKKMNPEAVVVAAGCYVQADPDGVKKDECVDIILGNNMKISIVEALNDYFGGADKT 125 Query: 124 PFLSLVPEQG--------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 +L + ++ + AY+KI +GCN C++CIIP +RG + SR +++ Sbjct: 126 SYLVDINDKYQEYESLKINQTGEHTRAYIKIQDGCNQFCSYCIIPYVRGRVRSRKPEDIV 185 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 +E K L GVKE+++ S+YG D+++ S++ L E + ++ Sbjct: 186 NEVKTLAATGVKEVVLTGIHISSYGTDLEN-----------ISLIELIEAIHEIEGIKRI 234 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL + P ++ +A KI P+ + LQ + LK M R + + + R Sbjct: 235 RLGSLEPRIITEEFAKRIAGLEKICPHFHLSLQSGCDKTLKAMNRKYNTEEYYEGCVKLR 294 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E+ + + IVGFPGETEEDF FL++ + FKYS +G A+ + +QV Sbjct: 295 EVFENPAITTDVIVGFPGETEEDFLETRKFLEKVHFYEMHIFKYSRRKGTVADKMKEQVA 354 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMA 401 + VK ER + L++ S E + +G+ + V+I+E+ E GRS Sbjct: 355 DTVKSERSAVLLALEKAQSLEYRKMYIGKRLEVLIEELTE--IDGRSYY 401 >UniRef50_D1H8D6 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H8D6_VITVI Length = 663 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 116/479 (24%), Positives = 221/479 (46%), Gaps = 49/479 (10%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAV 60 S++ P+ +I + GC N+ D E +L+ ++ GY +VV + A+++ +NTC D+A Sbjct: 176 SEILPRGRIYHETYGCQMNINDMEIVLSIMKKAGYNEVVEVPESAEVIFINTCAIRDNAE 235 Query: 61 QESLEA----------------IGEALNENG-KVIVTGCLGAK-EDQIREVHPKVLEITG 102 Q+ + IG A + + KV+V GC+ + +D+I + V + G Sbjct: 236 QKVWQRLNYFWFLKRHWKSNVSIGRADSLHPPKVVVLGCMAERLKDKILDADKMVDVVCG 295 Query: 103 PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTF 156 P +Y + + K L + E ++P A++ I GCN+ C+F Sbjct: 296 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSIMRGCNNMCSF 355 Query: 157 CIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVK 216 CI+P RG SRP+ ++ E L GVKE++++ Q+ ++Y + + E Sbjct: 356 CIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSY-----NDASGFDKEVEP 410 Query: 217 TSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILK 273 + L E+ + R Y P+P D+++ LM + + + +P Q S +L+ Sbjct: 411 GANWKLSEEFPE----MRFRYTSPHPKDFPDELLYLMRDRYNVCKSIHLPAQTGSSTVLE 466 Query: 274 LMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGC 333 M+R + + L +++ R I P++ + S FI GF GETEE++ + +K D Sbjct: 467 RMRRGYTREAYLDLVQKIRRIVPDVGITSDFICGFCGETEEEYADTISLVKAVGYDMAYM 526 Query: 334 FKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE 392 F YS E A+ D VP+ +K+ R +++ ++ + + ++G LV+++ ++ Sbjct: 527 FAYSMREKTHAHRNYVDDVPDNIKQRRLAEMIEVFRESTGQCYDSQIGTVQLVLVEGPNK 586 Query: 393 EGA----IGRS-------MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 IG++ + P + G N + GD + V++ + L+G Sbjct: 587 RAPDTELIGKTDRGHRVSFKNTPVPHWDDDVGGNQNPRVGDFVEVRILTSTRASLFGEA 645 >UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=10 Tax=Chlorobiaceae RepID=MIAB_CHLCH Length = 449 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 118/460 (25%), Positives = 201/460 (43%), Gaps = 39/460 (8%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M+ P + GC N DS + L+ EGY + DA +V++NTC + A Sbjct: 1 MTNANPDA-FYIHTFGCQMNQADSGIMTAILQNEGYVAASNEADAGIVLLNTCAVREHAT 59 Query: 61 QESLEAIGEALNENGK------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHV 113 + + + V VTGC+ E + + + +P V + GP +Y + + Sbjct: 60 ERVGHLLQHLHGRKKRSKGRLLVGVTGCIPQYEREVLFKNYPVVDFLAGPDTYRSLPLLI 119 Query: 114 HHYVPKPKHNP-----FLSLVPEQGVKLTPRHY--AYLKISEGCNHRCTFCIIPSMRGDL 166 K F S G++ A++ + GCN+ C +C++P RG Sbjct: 120 KQVQQAGKGATEAALAFNSAETYDGIEPVRSSSMSAFVPVMRGCNNHCAYCVVPLTRGRE 179 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 S P VL+E ++L +AG +EI ++ Q+ ++Y + + L + Sbjct: 180 RSHPKAAVLNEVRQLAEAGYREITLLGQNVNSY-----------YDPLAQCNFAELLAAV 228 Query: 227 SKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 S TR+ + +P + ++ +AE I ++ +P+Q S RIL+LM+R +++ Sbjct: 229 SCAAPATRIRFTTSHPKDISEALVRTIAEHSNICNHIHLPVQSGSSRILRLMQRGHTIEE 288 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 L +I R + P +TL + I GF GETE D Q L L+E + D F YSP Sbjct: 289 YLEKIALIRSLIPNVTLSTDMIAGFCGETEADHQATLRLLEEVQFDSAFMFYYSPRPRTP 348 Query: 344 AN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRS 399 A L D VPE +K+ R ++ Q +ISA + VG + V+ + E +GR+ Sbjct: 349 AAEKLTDDVPEALKKARLQEIIECQNRISASLFSQAVGSVVEVLAEAESRRSSEQLMGRT 408 Query: 400 MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 + + + GD+L V++ + L G Sbjct: 409 AGNR------TVVFARNGYQAGDVLHVRITGSTSATLLGE 442 >UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Bacteroidetes RepID=MIAB_SALRD Length = 503 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 113/455 (24%), Positives = 215/455 (47%), Gaps = 35/455 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++ + GC N+ DS + + L GY + AD+V++NTC ++A ++ + Sbjct: 42 KQVYIETYGCQMNVNDSGIVASVLEESGYGLTRDQAAADVVLLNTCAIRENAERKIRARL 101 Query: 68 GEALNENGK------VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +E K + V GC+ + +++ E V + GP +Y + + ++ Sbjct: 102 SMLRSEKEKRDGELMLGVLGCMAERLREKLLEQEDLVDVVVGPDAYRDLPQLLYEADATG 161 Query: 121 KHNPFLSLVPEQGVKLTPRHY-------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + L ++ + AY+ I GC++ CTFC++P RG SRP+ Sbjct: 162 QAAVNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFTRGREESRPVTT 221 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 +LSE RL + G KE+ ++ Q+ ++Y + + + S L +++S++ Sbjct: 222 ILSEVARLAEEGYKEVTLLGQNVNSY--------HYTDADGTSVSFAELVDRVSRVSPEM 273 Query: 234 RLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ Y +P DD++ + + + Y+ +P+QH + +L M+R + + LA ++ Sbjct: 274 RVRYSTSHPKDCTDDLLKVHRDRPNVCNYIHLPVQHGNTEVLDRMRRTYTREEYLALTER 333 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPD 349 +E+CP ++L + I GF GETE + L ++E R D FKYS A D Sbjct: 334 AKELCPGVSLSTDLIAGFCGETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAARKYED 393 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEI 406 VPE+ K+ R ++LQ Q + E + +VGR V+++ ++ GR+ + Sbjct: 394 DVPEDTKQRRLEEIIELQNQHAKESNEAEVGRVHTVLVEGPSKKSDAQFFGRTDTNK--- 450 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G V+ + + GD +RV++E L G+ + Sbjct: 451 -GVVF--DREDYEKGDYVRVRIEDCTSSTLLGTAI 482 >UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Thermotogaceae RepID=RIMO_PETMO Length = 435 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 150/446 (33%), Positives = 250/446 (56%), Gaps = 23/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K V LGCPKN D E L+++GY + A+ + ++TCGFI+ A +ES+E Sbjct: 1 MKKFHIVKLGCPKNDADMEIFKGLLQSKGYKYESNPQLANYIFIDTCGFIEEAKKESIET 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I E + N+N KVI GCL + D I + P++ + G S + ++E + + Sbjct: 61 IFEYVSLKDNNKNLKVIPIGCLTQRYFDDILKDIPEIDGLYGVLSPKTIVEKIENGEYFF 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 K + +L + + HYAY+KI +GC+ C FC IP+ +G SR I E+ E + Sbjct: 121 KRDIPETLYDCKIRAIPDSHYAYVKIGDGCSRNCAFCSIPTFKGKPKSRSIEEINEEVEF 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 LV GVKEI+++SQD + YG+D K ++ L ++L+ + W R+ Y+ Sbjct: 181 LVSKGVKEIILVSQDNTLYGIDNYQ----------KQALPDLLDKLNNIKGKFWIRVMYL 230 Query: 239 YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P +++I + K+L Y D+P+QH S +IL+ M R + + ++ R+ Sbjct: 231 HPDFLSEEIIESIHRNEKVLNYFDVPIQHISDKILQSMGRHKKRNELIKLFEKIRKEPS- 289 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 +R+T +VGFPGE EDF+ L+DF+KE + +R+G F +S E + LP+Q+ E++K+ Sbjct: 290 -AIRTTLMVGFPGEKAEDFEELVDFVKEIKFERMGSFIFSKEENTKSFTLPEQIDEQIKK 348 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN--GE 415 +R N M +Q +IS +++ +G + V+++E ++ +GRS DAPEIDG VY+ G+ Sbjct: 349 QRQNELMTVQSEISKNIMEKYIGETLEVLLEEKEDNVYVGRSYLDAPEIDGNVYIKNFGD 408 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 + G+ ++V + + EYDL G V Sbjct: 409 KELTFGNFVKVTITGSYEYDLEGEIV 434 >UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D7J9_PARTE Length = 504 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 112/462 (24%), Positives = 208/462 (45%), Gaps = 28/462 (6%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 ++ PK + GC N DS+ + + L +EGY +AD++ +NTC +A Sbjct: 38 VNNTNNGPKFFIETYGCQMNANDSQIVQSILSSEGYSNTNDISEADIIFLNTCSIRANAE 97 Query: 61 QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV--- 117 ++ + + E ++N + + GC+ + + V I GP SY+ + ++ + Sbjct: 98 KKVFQRMSELKSQNKVLGILGCMAERLKEQLFVQ-GANIIVGPDSYKSLPTLLNSFQLTR 156 Query: 118 -PKPKHNPFLSLVPEQGVKLTP--RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + N L+ + + + P Y+ I GCN+ C+FC++P RG SR + Sbjct: 157 DKQIDTNLSLTETYDDILPINPTDSITTYVSIMRGCNNMCSFCVVPFTRGRERSRNPESI 216 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSL-----------C 223 L E + L G+KE+ ++ Q+ ++Y + + H T + L Sbjct: 217 LEEIQILTQKGIKEVTLLGQNVNSYFFQDEKISSQHENTVGFTELYKLRSGNGLRFDQLL 276 Query: 224 EQLSKLGIWTRLHYVYPYPHV--DDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGS 280 ++++ TR+ + P+P V+ ++A I + IP+Q S ILK M+R + Sbjct: 277 DEIAVKFPKTRIRFTSPHPKNFPKKVLEVIAKHPNICKNIHIPIQSGSDEILKKMRRNYT 336 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 + + R + P +TL + IVGF ETE DF+ L L+ + + F YS E Sbjct: 337 RGAIVDLCNEARTLIPNVTLSTDVIVGFCDETEYDFEQTLSLLQLVQFENAFMFAYSMRE 396 Query: 341 GADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIG 397 A L D VPE VK R + ++ Q +I + ++G++ +V+++++ G Sbjct: 397 KTHAYRNLQDNVPESVKSSRLEKLIEQQHKIMNYKNSLEIGKKHIVLVEQLGNKPNQLKG 456 Query: 398 RSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 R+ ++ G V+ N GD + V++ + L G Sbjct: 457 RTDSNK----GVVFQNDNNIYAIGDFVEVEILGSGLKTLSGR 494 >UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S9_9BACT Length = 437 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 150/449 (33%), Positives = 252/449 (56%), Gaps = 23/449 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M ++ + ++LGC KNLVD+E +L + G + +DA++++VNTCGFID + Sbjct: 1 MKMISKSKTVALINLGCTKNLVDAEEMLGRIAANGSTICQYPEDAEVLVVNTCGFIDDSK 60 Query: 61 QESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 +ES++ I + K+IVTGCL + +++ P++ ++ G +E++ Sbjct: 61 KESIDMIFKMAKLKENAQCKKLIVTGCLAQRYSAELKSEIPEIDDVVGLKDFEKITHLTG 120 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + ++LTP+HY+YL+IS+GC++RCT+C IP +RG+ +SR I + Sbjct: 121 KRQMDNS-TIYQGDDWRNRIRLTPKHYSYLRISDGCDNRCTYCAIPGIRGNFMSRSIENI 179 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--W 232 L E++++ GVKEI +ISQDT++YG+D+ K + L E+++ + W Sbjct: 180 LEESRQMASEGVKEINIISQDTTSYGLDIYG----------KQMLHVLLEKIAAIEGIQW 229 Query: 233 TRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 RL Y +P ++I + E + I Y+D+P+QH + IL M R + I Sbjct: 230 IRLLYTHPGHFYPELINTINEHETICKYIDLPIQHINDTILGKMGRNTTRKSIETLINNL 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R + LR++ IVGFPGET+E +Q LL+F+K+ + +R+G F YS E A QV Sbjct: 290 RRSIRSIVLRTSVIVGFPGETDEQYQELLEFIKKTKFERLGVFAYSKEENTPAAKFKKQV 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGA 409 ++VK+ER N M Q++I E + +G++ VI+DE + IGR+ DAPE+DG Sbjct: 350 GKKVKQERLNEIMLAQREIVWENNKNLIGKKASVIVDEKEVVSGMLIGRTSGDAPEVDGK 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V++N + +K G+I + + + + YDL Sbjct: 410 VFIN-DKQIKVGEIRELVISNVNGYDLVA 437 >UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Synergistaceae RepID=D1B5R4_THEAS Length = 433 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 124/440 (28%), Positives = 202/440 (45%), Gaps = 28/440 (6%) Query: 15 LGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE--ALN 72 GC N+ D++++ L G+ +D+ + TC D A Q+ L IG Sbjct: 9 FGCQMNVYDADKLRAALLGMGWTQ-GEPGGSDVEVYVTCSIRDKAEQKVLSEIGRHSRSK 67 Query: 73 ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPE 131 E V + GC+ + ++ P V + GP +V E + + + L P Sbjct: 68 ERPLVALVGCMAQRTGRELARRFPWVKVVAGPRHLGKVPEALERSMADGEVRLLLDEDPR 127 Query: 132 QGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + L Y+ I+ GC+H C +CI+P +RG SR ++ E ++LV Sbjct: 128 EVDDLCCTPHVEEGAVRGYVTIAHGCDHFCAYCIVPYVRGRFRSRDPEGIVEEVRQLVAR 187 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV--YPYP 242 GV+EI ++ Q+ + YG D+ P L E ++++ +R+ + +P Sbjct: 188 GVREITLLGQNVNRYGKDL----------PGGPQFPGLLEMVARVEGISRVRFATNHPVD 237 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 +++ +M K+ P +++P+Q S R+LKLM R + D L+ + R+ PE+ + Sbjct: 238 FSRELVDVMVRCEKVCPSINLPVQSGSDRVLKLMGRGYTRDEYLSMVALLRDNLPEVGIT 297 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 S IVGFPGET EDF+ L L+E R D V YS G A + + K ER N Sbjct: 298 SDLIVGFPGETPEDFEKSLSLLEEVRFDLVHTAAYSVRPGTRAERMEGHLDVSTKAERLN 357 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 R QLQ +IS E KVGR V+++ +G G P+ D V G + K G Sbjct: 358 RVNQLQARISLEINLSKVGRVYPVLVEGPAPKGE-GMWQGRTPQ-DKVVLFKGPS--KVG 413 Query: 422 DILRVKVEHADEYDLWGSRV 441 + + V++ A + L G + Sbjct: 414 EEVPVRITSALAWYLQGELI 433 >UniRef50_B5W2N4 RNA modification enzyme, MiaB family n=5 Tax=Cyanobacteria RepID=B5W2N4_SPIMA Length = 436 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 110/438 (25%), Positives = 192/438 (43%), Gaps = 23/438 (5%) Query: 19 KNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL-----NE 73 N DSER+ L G V + AD+V+ NTC D+A Q+ +G N Sbjct: 1 MNKADSERMAGILDEMGLTFVEDPNQADIVLYNTCTIRDNAEQKVYSYLGRQAKRKQENP 60 Query: 74 NGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK---HNPFLSLV 129 N +IV GC+ +E + + P++ + GP ++ + + + P + Sbjct: 61 NLTLIVAGCVAQQEGEALLRRVPELDLVMGPQHANRLQDLLEQVFEGSQVVATEPINIVE 120 Query: 130 PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEI 189 + A++ + GCN RCT+C++P++RG SR + +E + L AG KE+ Sbjct: 121 DITKPRRDSNITAWVNVIYGCNERCTYCVVPNVRGTEQSRTPEAIRAEMEELARAGYKEV 180 Query: 190 LVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDV 247 ++ Q+ AYG D+ T + + L + + R+ + +P + + Sbjct: 181 TLLGQNIDAYGRDLPGSTPDGRHQHT---LTDLLYYVHDIPGIERIRFATSHPRYFTERL 237 Query: 248 IPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 I AE K+ + IP Q +LK M R + ++ I RE P+ ++ + IV Sbjct: 238 IRACAELPKVCEHFHIPFQSGDNDVLKAMARGYTHEKYRRIINTIREYIPDASISADAIV 297 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 GFPGETE F+ L + + D + YSP G A +Q+ EEVK +R R +L Sbjct: 298 GFPGETEAQFENTLKLVDDIGFDLLNTAAYSPRPGTGAALWENQLSEEVKADRLQRLNRL 357 Query: 367 QQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEIDGAVYLNGETNVKPGDI 423 + ER Q R V+++ + + +GR+ + + G G++ Sbjct: 358 VNVKAMERSQRYRDRIEEVLVEGTNPKDPSQVMGRTRGNR-----LTFFKGNLAELSGEL 412 Query: 424 LRVKVEHADEYDLWGSRV 441 ++VK+ + L G + Sbjct: 413 VKVKIIEVRAFSLTGEPI 430 >UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC80_9ACTN Length = 449 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 147/450 (32%), Positives = 232/450 (51%), Gaps = 17/450 (3%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 TP + +++LGC KN VD++R+ + L GY+ DAD+ IVNTC F+ SA ES+ Sbjct: 3 TPLGSVLYITLGCAKNEVDTDRMRSLLTAAGYEEAFDPQDADIAIVNTCSFLASATSESI 62 Query: 65 EAIGEALNE------NGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 E E NE + +++ GC+ ++ D + + P+V + ++ + + Sbjct: 63 ETTLELANEVQDGVRSCPIVMCGCVPSRYGDDLPDELPEVAAFVKADEEDGIVAVIDGVL 122 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + ++ Q + AY+KIS+GCN C+FC+IP +RG SR ++SE Sbjct: 123 GVERE---IAAYIPQVKRTVEGAVAYVKISDGCNRFCSFCMIPYIRGRYHSRNSESIISE 179 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRT-GFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + LV GV+EI++I QDT +G D + + + ++ E + +W R+ Sbjct: 180 VRDLVAGGVREIVLIGQDTGIWGTDFADEDVADGSPRNLAQLLRAVAEAVRPHNVWVRVL 239 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y+ P D++I + + ++LPY+DIP+QH RILK M+R GS + RE Sbjct: 240 YLQPEGMTDELIDTIRDTPEVLPYIDIPVQHCDARILKAMRRSGSRQELEDLFRDLRERI 299 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + +RST +VGFP ET+++F+ L+DF+ D F YS EG+ A + QV EEV Sbjct: 300 PGIVIRSTAMVGFPTETDDEFRDLIDFMDTVGFDYTSVFAYSREEGSLAAKMEGQVDEEV 359 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE----GAIGRSMADAPEIDGAVY 411 K ER M L + + VG VI+D ++E IG + AP+ DGAV+ Sbjct: 360 KLERAQEAMDLAESLGFAATAAHVGERAQVIVDGIEETEDGAELIGHAWFQAPDSDGAVH 419 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 L+ GDIL V+ + Y+L G V Sbjct: 420 LDASE-ASVGDILTVEFTDSFCYELIGHVV 448 >UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Bacteria RepID=RIMO_PORG3 Length = 434 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 149/449 (33%), Positives = 240/449 (53%), Gaps = 32/449 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDA--DMVIVNTCGFIDSAVQESL 64 + ++ ++LGC KNLVDSE ++ + + GY V ++V+VNTCGFI A +ES+ Sbjct: 3 RNRVDVITLGCSKNLVDSEVLMRQFLSNGYTVHHDPASVCGEIVVVNTCGFIGDAQEESV 62 Query: 65 EAIGEA--LNENGKVI---VTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 I E + G++ V GCL + + +++ P+V G ++Q++ H+ Sbjct: 63 NTILEMVEAKKAGRIGSLYVMGCLSERFREDLKKEIPEVDAYYGKFDWKQLISHLGKS-- 120 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + + TPRHYAYLKISEGC+ C++C IP + G SRP+ +++ E Sbjct: 121 ------YYAEAENRRKLTTPRHYAYLKISEGCDRSCSYCAIPIITGRHRSRPMEDLVEEV 174 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 + LV G +E +I+QD + YG+D+ + L +LS + W RLH Sbjct: 175 RMLVKHGTREFQLIAQDLTFYGLDLYG----------ANRLAELTARLSDIKGVEWLRLH 224 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++P+M E + YLD+ LQH S +L+ M+R + I++ R Sbjct: 225 YAYPAQFPLDLLPVMRERPNVCKYLDMALQHISDPMLRRMRRRITKAETYELIERIRTEV 284 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVPEE 354 P + LR+T + G PGETE DF+ LL F+++ R +R+G F YS G + D +PE Sbjct: 285 PGIHLRTTLMTGHPGETERDFEELLQFVRDIRFERLGAFTYSHESGTYCDKNYQDDIPES 344 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 VK+ER M +Q++ISA + K+G + V+ID ++ +GR+ D+PE+D V + Sbjct: 345 VKQERLGELMAVQERISAAHNEAKIGSRLRVVIDRAEDGFYVGRTEYDSPEVDPEVLIPF 404 Query: 415 --ETNVKPGDILRVKVEHADEYDLWGSRV 441 +KPG +V A+ +DL+ V Sbjct: 405 VSGQELKPGRFYMAEVTGAEPFDLYARIV 433 >UniRef50_D2QJ28 RNA modification enzyme, MiaB family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ28_9SPHI Length = 513 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 117/481 (24%), Positives = 198/481 (41%), Gaps = 52/481 (10%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + ++ S GC N DSE + +R GY S D+AD++ +NTC D+A Q+ Sbjct: 37 KKRLYIESYGCQMNFADSEIVAAVMRNAGYATTSSADEADVIFLNTCAIRDNAEQKVRHR 96 Query: 67 IGEA---LNENGKVIV--TGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + +++V GC+ + ++ E V + GP +Y + + V Sbjct: 97 LKHLTGLKRQKPELLVGMLGCMAERLKTKLLEEEKVVDIVAGPDAYRDIPKLVEEAESGQ 156 Query: 121 KHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K E ++P A++ I GC++ C+FC++P RG SR + Sbjct: 157 KAVNVFLSREETYADISPIRLNSNGVTAFVSIMRGCDNMCSFCVVPFTRGRERSRDPFSI 216 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGF------------------------- 209 + EA+ L D G +E+ ++ Q+ +Y ++ R+ Sbjct: 217 VREAQDLFDQGYREVTLLGQNVDSYKWELGVRSEELGVADRTGRPASANMDASATPNSSL 276 Query: 210 -HNGEPVKTSMVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQ 265 T+ L E ++++ + R +P DDV+ MA I Y+ +P Q Sbjct: 277 LTTNTNTTTTFAHLLEMVAQIHPDLRVRFSTSHPKDITDDVLHTMARYDNICNYIHLPAQ 336 Query: 266 HASPRILKLMKRPGSVDRQLARIKQWREICP-ELTLRSTFIVGFPGETEEDFQMLLDFLK 324 + R+LKLM R + +I + REI + + + I GF ETEE+ Q L + Sbjct: 337 SGNSRVLKLMNRTYDRPWYIGKIDRIREILGEDCGISTDMISGFCTETEEEHQDSLSLMD 396 Query: 325 EARLDRVGCFKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREI 383 D F YS G A D +PE+VK+ R N + Q SAER Q +G+ Sbjct: 397 YVHYDYAYMFAYSERPGTLAAKKYADDIPEDVKKRRLNEIIARQLAHSAERNQRHIGQVQ 456 Query: 384 LVIIDEVDEEG---AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+I+ + GR+ + + V + + + G + V V L G Sbjct: 457 RVLIEGPSKRSDDFLCGRN-----DQNKMVVFP-KGDHQKGQYVNVLVTECTSATLRGEV 510 Query: 441 V 441 V Sbjct: 511 V 511 >UniRef50_A4S5H4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S5H4_OSTLU Length = 450 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 159/458 (34%), Positives = 256/458 (55%), Gaps = 37/458 (8%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA- 70 VSLGCPKN VD E +L +L G+DV ++ AD +++N+CGF++ A ES+EAI EA Sbjct: 1 MVSLGCPKNTVDGEVMLGDLHGAGFDVTDDHESADAIVINSCGFVEDAKNESVEAILEAS 60 Query: 71 --LNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 N + K+IVTGCL + + + P+ I G +Y + + V + + Sbjct: 61 QLANGSKKIIVTGCLAQRYANDLANELPEADVIVGFENYANLPKTVGGLLGVETNGLIAP 120 Query: 128 --------------LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + +++TPRH AYL+++EGC+H+CTFC IPS RG S+P Sbjct: 121 QQARVQVGGASPPFREEIKRLRITPRHTAYLRVAEGCDHKCTFCAIPSFRGRFRSKPWQS 180 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 ++ EAK L D+GV+E+ +I++DT+ +G+D++ G + L L+++ Sbjct: 181 IIDEAKALADSGVRELNLIAEDTNQWGIDLRASDG--------RGLAELLYALAEVEGIE 232 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W R+ Y YP D++I +A+ ++ Y+DIPLQH + L M RP + + Sbjct: 233 WMRILYAYPSYFSDELIRAIADVPQVCKYIDIPLQHITNLSLLRMNRP-PRQHTEDLLYK 291 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R+ P+L LR+TFI GFPGETEE+ + L+ F ++ + +R+G F YS +G A PDQ Sbjct: 292 LRDRIPDLALRTTFISGFPGETEEEHEELMQFCRDFKFERLGAFAYSEEDGTPAMEYPDQ 351 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDG 408 VPEE++ R ++ + QQ+IS + +VG+++ V+ID DE+ IGR+ +AP+ID Sbjct: 352 VPEEIRAIRRDQLVSQQQEISEDFAMSRVGKDVDVLIDNWDEDMQAFIGRTTLEAPDIDP 411 Query: 409 AVYL-----NGETNVKPGDILRVKVEHADEYDLWGSRV 441 V++ G ++PG + R V + +DL + Sbjct: 412 VVFVTEDKSKGLPPIEPGQMRRCNVIGSSLFDLEAQPI 449 >UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Parachlamydiaceae RepID=MIAB_PARUW Length = 450 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 126/452 (27%), Positives = 209/452 (46%), Gaps = 30/452 (6%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + K + GC N +DSE ++ +L G +DAD++I NTC D A ++ Sbjct: 13 MRSLKKFFVKTYGCQMNELDSEIMIGQLENRGLTRSHDENDADLLIFNTCSIRDLAERKV 72 Query: 64 LEAIGEA---LNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 + +G+ + VTGC+ AK+D + + P + + G ++ + + + Sbjct: 73 MGKLGKLGLTKQSQAIIGVTGCMANAKKDSLFQKLPHIDFVLGTNNIHDLNHVLDEVLAS 132 Query: 120 PKH-----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K + F + K + AY+ I GC+ CT+C++P RG VSR + Sbjct: 133 GKQSIRTDDHFEFELDYLNAKREDQIKAYVSIIRGCDKFCTYCVVPYTRGSEVSRAPENI 192 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + LV+ G KEI ++ Q+ ++YG D K L QL K+ R Sbjct: 193 LEECRHLVNQGYKEITLLGQNVNSYGKDKLEW---------KCLFHDLLYQLDKIPGLER 243 Query: 235 LHYVYPYP--HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + ++ +P +++ + + K + ++ PLQ S R+LK M R +V++ L +++ Sbjct: 244 VRFMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQML 303 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +EI P + L + IVGFP ETEE+FQ LKE F YSP +G A D V Sbjct: 304 KEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPAMRWRDDV 363 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDG 408 PEEVK++R R +QLQ I + Q +G+ + V+++ D+ GR+ Sbjct: 364 PEEVKQDRLQRLLQLQDTIYMKHRQAFLGQTVEVLVERRNFKDDRLVKGRTRCWK----- 418 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V G + G + +VK+ L G Sbjct: 419 NVLFTGGDEL-VGTMQQVKIHGYSHQTLLGDL 449 >UniRef50_Q2GCU4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Alphaproteobacteria RepID=MIAB_NEOSM Length = 471 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 121/458 (26%), Positives = 204/458 (44%), Gaps = 34/458 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 K K + GC N+ DSE I + G+ + +DAD++I+NTC + A + Sbjct: 23 KKNNSLKKFHIKTYGCQMNVYDSEMIEKIVSGLGFTLSERAEDADLIILNTCNIREKAAE 82 Query: 62 ESLEAIG------EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 + +G + E ++V GC+ E ++I V + GP S + E + Sbjct: 83 KLYSELGQIRLLQKKKQERILIVVAGCVAQAEGEEIMRRAENVDVVVGPQSIHSLPELIA 142 Query: 115 HY---------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 + F L E + P+ A+L I EGC+ C FC++P RG Sbjct: 143 KVNRQSGKAIKMEFDPIEKFDYLAEETRKRRVPQSSAFLSIQEGCDKFCAFCVVPYTRGA 202 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 SR EV EA L GVKEI ++ Q+ + Y G + ++ L + Sbjct: 203 EYSRSTEEVYREALSLTTKGVKEITLLGQNVNGY-------HGTLDSGNKVLNLGQLISR 255 Query: 226 LSKLGIWTRLHYVYPYPHV--DDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVD 282 L K+ R+ Y +P ++ A E K++P++ +P+Q S +ILK M R + Sbjct: 256 LGKIPSLKRIRYTTSHPVDMHKELYDAHANESKLMPFVHLPVQSGSDKILKQMNRKYTTA 315 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 L I +++ ++ S FIVGFPGE+++DFQ L +++ + FKYSP G Sbjct: 316 DYLKIINEFQNARSDIAFSSDFIVGFPGESDDDFQQTLALIEQVNYAQCYSFKYSPRPGT 375 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD 402 P Q+ EE K R + QL ++ E ++ +G+ + V+ D+ + GR+ Sbjct: 376 PGATYP-QISEETKNTRLQKLQQLLKEKQLEFNKKMIGKTVTVLFDKKHPDKISGRT--- 431 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 E V+ + + I+ ++VE A + L + Sbjct: 432 --EYMQQVFSDDSNLLD--KIVTMRVEDASTFTLKCTA 465 >UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Proteobacteria RepID=MIAB_NITOC Length = 447 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 113/449 (25%), Positives = 204/449 (45%), Gaps = 32/449 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRT-EGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N DS R+ LR G ++ + A+++++NTC + A ++ Sbjct: 3 KKLYIKTHGCQMNEYDSSRMADVLRESHGLELTSDPEQAEVLLLNTCSVREKAQEKVFSQ 62 Query: 67 IGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + V GC+ ++E + IR P V + GP + ++ + Sbjct: 63 LGRWRQLKQSRPELVIGVGGCVASQEGETIRVRAPYVDLVFGPQTIHRLPAMLTQAKASS 122 Query: 121 KHNPFLSLVPEQGVKLTPRHYA-----YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + LS + P A ++ + EGC+ C+FC++P RG+ +SRP +V+ Sbjct: 123 QPVVDLSFPEIEKFDKLPEPRAEGPTAFVSVMEGCSKYCSFCVVPYTRGEEISRPFDDVI 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E L + GV+EI ++ Q+ +AY GE + L ++ + R+ Sbjct: 183 AEIVGLAEQGVREITLLGQNVNAY--------RGSIGEGDTADLALLIHYVASIEGIERI 234 Query: 236 HYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + +P D +I AE ++ +L +P+Q S R+L LMKR +V A++++ R Sbjct: 235 RFTTSHPVEFSDSLIQAFAEVPALVSHLHLPVQSGSDRMLSLMKRGHTVLEYKAKLRKLR 294 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 ++ P++++ S FIVG PGETE DFQ L + E D F YSP G A +LPD P Sbjct: 295 QVRPDISISSDFIVGLPGETEADFQATLALVDEVGFDHSFSFIYSPRPGTPAASLPDCTP 354 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGA 409 +K+ER + + + V V+++ ++ GR+ + Sbjct: 355 IALKKERLAILQGRLRALEIAISRGMVDTVQQVLVERPSKKDPTMLAGRTANNR-----V 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V + ++ G + +++ A L G Sbjct: 410 VNFSASQDM-VGQFVNIRITEALPNSLRG 437 >UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8D6_GEMAT Length = 451 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 118/437 (27%), Positives = 207/437 (47%), Gaps = 30/437 (6%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 +T +P + + GC N+ DSE + +L GY+ V + D AD+++VNTC ++A Sbjct: 1 MTKKPTVYIETYGCQMNVADSELMYGKLVAHGYEPVDAPDGADVILVNTCAIRENAETRV 60 Query: 64 LEAIGEAL---NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 + +GE + V VTGC+ + ++ E V + GP Y + + Sbjct: 61 IGRLGELRRYMKPDTIVGVTGCMAQRLGPRVLEQARHVSLVVGPDGYRALPALLDGARRG 120 Query: 120 PKHNPFLSLVPEQGVKLTPRHY----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K + E + R + A++ + GC++RCT+CI+P RG SR + +V+ Sbjct: 121 EKFTATDFDLEEHYEDVVARRFEGVKAWIPVQRGCDYRCTYCIVPFTRGPERSRKLDDVV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E +++V+ G+ E++++ Q ++Y L + + R+ Sbjct: 181 REVQQVVEQGLSEVVLLGQTVNSY-------------TDGTHDFADLLRAVGAVDGIRRV 227 Query: 236 HYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 Y P+P D VI MA + ++ +P+Q S +LK M R S + L + + R Sbjct: 228 RYTSPHPNDFSDRVIDAMASVATVCEHIHLPMQSGSTSMLKRMLRRYSREEYLDCVARMR 287 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-- 350 P L+L + IVGFPGET+ +F+ L +E R D FK+SP EG A +P Sbjct: 288 AAIPGLSLTTDIIVGFPGETDAEFEDTLSLCQEVRFDDAFMFKFSPREGTPATRMPADWT 347 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV 410 +P++V R++R ++ + IS E +++G + V+I+++ +G + A D Sbjct: 348 IPDDVMAARFDRLVKTVRGISRENNLKRLGDTVEVLIEKLARDGELW----QARSRDFKT 403 Query: 411 YLNGETNVKPGDILRVK 427 + K GD LRV+ Sbjct: 404 VMVPADAGKIGDYLRVQ 420 >UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWT7_9FIRM Length = 423 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 166/446 (37%), Positives = 247/446 (55%), Gaps = 41/446 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTE--GYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 K+ SLGC KN VD+E++L EL + G V +A++ IVNTC FI A +ES++ Sbjct: 1 MKLYLESLGCDKNRVDAEKLLFELLQKYPGSSVTDEPSEAEIAIVNTCSFIGPAKEESIQ 60 Query: 66 AIGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 I + K+IV GCL + D+IR+ P++ EIT Y + L+H V Sbjct: 61 CILDLAQYKETGKLEKLIVAGCLVERYKDEIRKELPEIDEITSVKDYVKRLDHQMARVES 120 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + ++ YLKI+EGC+ C++CIIP +RG S P VL EA+ Sbjct: 121 GE-----------------KYSRYLKIAEGCDKYCSYCIIPRLRGHYRSIPKELVLEEAR 163 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHY 237 LV G E+++++Q+T+ YG D+ K ++ L +LS++ W R+ Y Sbjct: 164 ALVSEGAGELILVAQETTLYGTDLYK----------KKALAELLAELSEIPNLQWIRILY 213 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP ++I M K+ YLD+P+QHAS RILK M R + +I R+ P Sbjct: 214 CYPEEIEPELIREMKRNPKVCHYLDLPIQHASDRILKRMNRRTRKEELKEKIALLRKEMP 273 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++ LR+T I GFPGETEEDFQ +LDF+ E R DR+G F YS EG A + DQ+PE++K Sbjct: 274 DIALRTTIITGFPGETEEDFQEVLDFISEMRFDRLGAFPYSQEEGTKAAEMEDQIPEKLK 333 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYLNG 414 +R ++ M+LQQ I+ + +E++GR++ V++ DEE + RS DAP++D +Y+ G Sbjct: 334 NQRLSQIMELQQNIAFRKAEEQIGRKLKVLVCGYDEEEQRVLCRSYMDAPDVDSYLYVFG 393 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 E + G L KV + YDL G Sbjct: 394 EKK-EVGSFLYAKVIDTEGYDLIGEW 418 >UniRef50_B3ES11 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=28 Tax=cellular organisms RepID=MIAB_AMOA5 Length = 486 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 197/458 (43%), Gaps = 28/458 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T + S GC N+ DSE +++ LR G+++ +Y+ AD++ +NTC D A Q Sbjct: 32 TITRNLYVESYGCQMNIADSEVVVSILRPHGFEITDTYEKADVIFINTCAIRDKAEQTVR 91 Query: 65 EAI-----GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + + + N + + V GC+ + Q + E V + GP +Y + + Sbjct: 92 KRLSQFNQLKRRNPDLVIGVLGCMAERLKQTLLEEEKLVDLVAGPDAYRDLPRLLATVDS 151 Query: 119 KPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K E ++P A++ I GC++ C+FC++P RG SR Sbjct: 152 GHKAINTFLSREETYADISPIRLNSNGVSAFISIMRGCDNMCSFCVVPFTRGRERSRDPY 211 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGV--DVKHRTGFHNGEPVKTSMVSLCEQLSKL- 229 ++ EA L + G +E+ ++ Q+ +Y + + + + L ++++ Sbjct: 212 SIVKEATELFEQGYREVTLLGQNVDSYKWSPNTDKKEQPTTPQEGVVNFAQLLAMVAQIH 271 Query: 230 -GIWTRLHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 + R +P D V+ + A I Y+ +P+Q S R+LKLM R L + Sbjct: 272 PDLRIRFSTSHPKDITDQVLYTIKAYDNICKYIHLPVQSGSSRVLKLMNRTYDRAWYLQK 331 Query: 288 IKQWREICP-ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN- 345 I+ R I + + S I GF ETEED Q L ++ + + F YS G A Sbjct: 332 IEDIRRIVGEDCGISSDMIAGFCTETEEDHQDTLSLMEHIKYEFSYMFYYSERPGTLAAR 391 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMAD 402 D VP VK+ R + Q+Q S E+ + +G+ V+++ ++ I GR+ A+ Sbjct: 392 KYADDVPLAVKKRRLQEIIDKQRQHSFEKNLKDIGKVYQVLVEGPSKKSDIEWQGRNSAN 451 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + + K G + V + + L G Sbjct: 452 K------VVVFPNVDCKKGTYVDVLITNCTTGTLLGEI 483 >UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Planctomycetaceae RepID=MIAB_RHOBA Length = 479 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 126/473 (26%), Positives = 221/473 (46%), Gaps = 48/473 (10%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 ++ + ++GC N++DSE ++ +L+ GY VV + +AD+++ NTC + A +++ Sbjct: 2 ISMTKTVYIKTVGCQMNVLDSEMVIADLKRHGYTVVDTPGEADLLLYNTCSIREQAEEKT 61 Query: 64 LEAIGEALNENGK-----VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYV 117 A+G+ + + V GC+ K+ + I P V + GP + + + Sbjct: 62 YSALGKLKETKARHPEKTIGVMGCMAQKDQETIFRRAPFVDMVVGPGQLHAIPDMLTKVT 121 Query: 118 PKPKHNPFLSLVPEQGVKLT------------------PRHYAYLKISEGCNHRCTFCII 159 +SL + G + AYL+I GC+ CT+C++ Sbjct: 122 SGEGRQMAVSLGRKDGKQTVVARSHETFDPLRDPTMRPTPFQAYLRIQIGCDKFCTYCVV 181 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 P+ RG R E++SEA+ L + G EI ++ Q ++Y H G +T M Sbjct: 182 PNTRGPEQGRSPEEIVSEARVLAEQGALEITLLGQTVNSY---------RHRGPDGETDM 232 Query: 220 VSLCEQLSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMK 276 L E+L + R+ +V YP ++ + + K+ PYL +P Q S +LK MK Sbjct: 233 AGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRDLPKVSPYLHVPAQSGSDAVLKRMK 292 Query: 277 RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKY 336 R ++ + ++ + PE ++ S FIVGF GET+EDFQ + ++ R F+Y Sbjct: 293 RGYTIADYMEMFERIETVLPEASVSSDFIVGFCGETDEDFQKSVKLIERCRFKNSFIFQY 352 Query: 337 SPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA 395 S EG A A L D VP EVK R N + +Q +IS E Q+ +G + V+++ ++ Sbjct: 353 SVREGTKAAANLIDDVPREVKAARNNELLAVQDRISKEDNQKLIGDTVEVLVEGPSKKAD 412 Query: 396 IGRSMADAPEI--------DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 +S DAP + D V +G + G ++ ++++ + L G Sbjct: 413 --KSDLDAPIVQMTGRTICDRIVVFDGNRR-QAGQLMDIQIDDVSSHTLIGRV 462 >UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=23 Tax=Proteobacteria RepID=MIAB_SPHWW Length = 453 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 132/455 (29%), Positives = 206/455 (45%), Gaps = 33/455 (7%) Query: 6 PQPK-IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 P PK S GC N+ D R+ L +G S D AD+V++NTC + A ++ Sbjct: 8 PAPKSFHVKSFGCQMNVYDGARMAELLEAQGMHAADSADAADLVVLNTCHIREKAAEKVY 67 Query: 65 EAIGEALNE---------NGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 IG + + + V GC+ E +I P V + GP +Y + + V Sbjct: 68 SDIGRIVKKAADAEEGRARPMIAVAGCVAQAEGPEIPRRAPAVDIVVGPQAYHNLPQLVA 127 Query: 115 HYVPKPK----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + P S + A+L + EGC+ CT+C++P RG +SRP Sbjct: 128 DAAEGRRALDTDMPAASKFDTLPKRRRQGPTAFLTVQEGCDKFCTYCVVPYTRGAEISRP 187 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAY-GVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 G ++ EAK LVDAG +EI ++ Q+ +A+ G D + RT +G L L L Sbjct: 188 WGAIVDEAKALVDAGAREITLLGQNVNAWTGEDDRGRTQGLDG---------LIRALDAL 238 Query: 230 GIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 R+ Y +P D +I E K++P+L +P+Q S RILK M R L Sbjct: 239 PGLARIRYTTSHPNDMSDGLIAAHGEVAKLMPFLHLPVQAGSDRILKAMNRSHDAAGYLR 298 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 I++ R P++ + FIVGFPGET+EDF+ L ++ + FKYSP G A + Sbjct: 299 LIERVRAARPDIAVSGDFIVGFPGETDEDFEATLAIVRAVDHAQAFSFKYSPRPGTPAAS 358 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 + QV V +ER R L + VG+ V+I+ ++ G+ + +P + Sbjct: 359 MDGQVAPAVMDERLQRLQALLNEQQHRFNLATVGKRCEVLIERDGKKP--GQRIGKSPWL 416 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + +G G ++ V + A L G+ V Sbjct: 417 QSVIVEDGPA---IGTLVTVDIVSAGPNSLSGALV 448 >UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=CK5P1_DROME Length = 583 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 116/476 (24%), Positives = 216/476 (45%), Gaps = 45/476 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F GC N D+E + + L+ GY ++AD++++ TC D A Q + Sbjct: 92 RKVHFEVYGCQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRL 151 Query: 68 GEALNENGK---------VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLE--HVHH 115 K + + GC+ + ++++ E V I GP SY+ + + Sbjct: 152 KHLRAMKNKRSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISR 211 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPR-----HYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LSL + R A++ I GC++ CT+CI+P RG SRP Sbjct: 212 HYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRP 271 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVK-------------- 216 + +++E K L + GVKE+ ++ Q+ ++Y D + + + Sbjct: 272 LASIVAEVKALAEQGVKEVTLLGQNVNSY-RDRTAQEEQDSLKATPVPGFSTVYKPKTGG 330 Query: 217 TSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILK 273 T +L +++ R+ + P+P D+V+ ++ + L +P Q + ++L+ Sbjct: 331 TPFAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLE 390 Query: 274 LMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGC 333 M+R S + L ++ R+ P + L S FI GF GETEE+FQ + +++ + + Sbjct: 391 RMRRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYL 450 Query: 334 FKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE 392 F YS E A+ D VP VK ER R +Q+ ++ + + ++ G+E L++I+ + Sbjct: 451 FAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQLILIEGKSK 510 Query: 393 E---GAIGRSMADAPEIDGAVYLN------GETNVKPGDILRVKVEHADEYDLWGS 439 GR+ A+ I ++Y+ + GD L V++E ++ L G+ Sbjct: 511 RSDAHWFGRNDANIKVIVPSIYVPISGDSTARKSFGVGDFLAVRIEESNSQVLKGT 566 >UniRef50_Q8EUX4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Bacteria RepID=MIAB_MYCPE Length = 491 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 109/449 (24%), Positives = 205/449 (45%), Gaps = 27/449 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC NL D+E ++ L GY+ + +D+V++NTC + A + I Sbjct: 54 KTYHIKTFGCQSNLRDTEVMMGMLELIGYEYNEDVNTSDLVLLNTCAVREHAESKVFADI 113 Query: 68 G-----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + N N V GC+ +E ++I + + V I G H+ ++L + + + Sbjct: 114 GILDRIKKSNPNFIFGVCGCMAQEEAVVNRILKSNFNVDFIFGTHNVHRILNLLEQVIFE 173 Query: 120 PKHNPFL-----SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + +++ K T ++ + GC+ CT+CI+P RG + SR ++ Sbjct: 174 KNLVVEVWSHEGNVIENLPSKRTNNLKGFVNVMYGCDKFCTYCIVPMTRGKIRSRRKEDI 233 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 L E +++ G KE+ +I Q+ ++YG+D + + +L E ++K GI Sbjct: 234 LDEVHQMISEGYKEVTLIGQNVNSYGIDFDNGENY--------LFNNLLEDVAKTGIERV 285 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R P+ ++ M + I+P++ +P+Q ILK M RP + + + R Sbjct: 286 RFTTSNPWNFTRSIVDTMKKYPNIMPHIHLPIQSGDETILKKMNRPMKIGDYIDLVDYIR 345 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P ++ + IVGFP ET+E F L+ K D F YS +G A +PD++P Sbjct: 346 ANIPNCSITTDLIVGFPNETKEQFNKTLELYKRIEFDNAFTFIYSKRDGTVAAIIPDEIP 405 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 K+ER ++ + S + ++ V + + V++D ++ S +P+ + Sbjct: 406 LSEKKERLQELNEMVKTFSKKNNEKYVNKVLDVLVDGPSKKDKTVIS-GYSPQWK---VV 461 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 N + K G+I++V + A + L G + Sbjct: 462 NFTGSAKSGEIVKVLITSASRFTLNGKMI 490 >UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R676_9PLAN Length = 475 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 126/475 (26%), Positives = 212/475 (44%), Gaps = 55/475 (11%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ ++GC N++DSE ++ LR GY++ AD+++ NTC + A ++ A Sbjct: 1 MKRLYIETVGCQMNVLDSEMVVASLRKRGYELERDEASADVLLFNTCSVREQAENKTYSA 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKEDQI-REVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G N + + V GC+ K+ Q+ + P V + GP ++ + + Sbjct: 61 LGRLRSLKKANPDKIIGVMGCMAQKDQQLVFDRAPYVDLVVGPGQLSRIPDLIDQVAAGH 120 Query: 121 KHNPFLSLVPEQGVKLTPRHY------------------AYLKISEGCNHRCTFCIIPSM 162 +SL + R AYL+I GC+ CT+CI+PS Sbjct: 121 GKQMAVSLGRKDAANEEVRRSHETFDPLRDPTMRPTPFQAYLRIQIGCDKFCTYCIVPST 180 Query: 163 RGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSL 222 RG RP ++ EA+ L D G KEI +I Q ++Y T T + L Sbjct: 181 RGPEQGRPPQQIYDEARILADQGCKEITLIGQTVNSYRYKSGEST---------TRLSDL 231 Query: 223 CEQLSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPG 279 LS++ RL +V YP +D++ + + K+ PYL +P Q S +L MKR Sbjct: 232 LVNLSEIDGIKRLKFVTNYPKDMTNDLLAAVRDLPKVSPYLHVPAQSGSNTVLTRMKRGY 291 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 SV+ + + E+ P+ + S FIVGF GETE DF+ + + R FKYS Sbjct: 292 SVEDYREMMARIYEMVPDAAVTSDFIVGFCGETEADFEATKQLVSDCRFKNSFIFKYSER 351 Query: 340 EGAD-ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE----- 393 G A L D +P +VK R N ++LQ +IS + Q+ +G+ + V+++ Sbjct: 352 PGTKGAELLADDIPFDVKHRRNNELLELQNRISEQENQKFLGQRVEVLVEGPSSRAVSRG 411 Query: 394 -------GAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 GR+ D V +G + G+++++ + + L+G+ V Sbjct: 412 EVEGDLVQLTGRTPCDR-----IVVFDGNRRL-TGELVQLAIYECAPHTLFGAIV 460 >UniRef50_B9L1I3 MiaB-like tRNA modifying enzyme YliG, TIGR01125 n=2 Tax=Thermomicrobia (class) RepID=B9L1I3_THERP Length = 470 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 163/446 (36%), Positives = 239/446 (53%), Gaps = 24/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + V+LGC KN VDSE + L G D+A +++VNTCGF+ +A ES AI Sbjct: 6 RFHIVTLGCSKNQVDSEGMAQRLIARGLQPTDEPDEAAVLVVNTCGFLAAARAESRAAIE 65 Query: 69 EA---LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV--PKPKHN 123 E +I GC+ + + E+ P + H + ++ V + P P Sbjct: 66 ELAARRRPGQIIIAAGCMVSLDQHRAELPPGLDAYVPTHDWNRIDAVVADLLGLPIPSVL 125 Query: 124 PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 +P R AY+KI++GC+HRC+FC IP ++G+ S+ E++ E + LV+ Sbjct: 126 ESTRDLPSFPRLPVRRPSAYVKIADGCDHRCSFCAIPLIKGNQRSKRPSEIVREIRELVN 185 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 AG KE+++++QDT YG D+ R G + + S+ E + L W RL Y+YP P Sbjct: 186 AGTKEVILVAQDTIRYGADLGLRNGLPD------LLRSIAEHVPDLP-WLRLLYLYPSPL 238 Query: 244 VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 + +I MAE K PYLDIPLQHA P +L+ M RP D I RE P++ LR+ Sbjct: 239 LFRLIDTMAELKPCVPYLDIPLQHADPVLLRRMMRPSDPDFYRRLIAYARERLPDVALRT 298 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 TFIVGFPGET+E F+ L DF+ E D VG F YS + + + D VP EV EER Sbjct: 299 TFIVGFPGETDEQFRRLYDFVAEMEFDHVGVFVYSREQPTPSARMEDPVPPEVAEERRAA 358 Query: 363 FMQLQQQISAERLQEKVGREILVIIDE----VDEEGAI-----GRSMADAPEIDGAVYLN 413 M+LQQ+IS R + VG+ + ++++ DE G GR+ APE+DG V++ Sbjct: 359 LMELQQRISWARNKTLVGKILPILVEGTGEVEDERGNRAPLSAGRAARHAPEVDGLVFVP 418 Query: 414 GETNVKPGDILRVKVEHADEYDLWGS 439 E + G+ + V++ A+ YDLW Sbjct: 419 EE--LPLGEFVTVRITQAEPYDLWAE 442 >UniRef50_C4V544 2-methylthioadenine synthetase n=3 Tax=Selenomonas RepID=C4V544_9FIRM Length = 519 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 110/443 (24%), Positives = 193/443 (43%), Gaps = 25/443 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + F++LGC N ++E + R GY++VP + AD+ ++NTC + ++S + I Sbjct: 92 RAAFMTLGCKVNQFETETMEGLFRARGYEIVPFEERADVYVINTCSVTHLSDRKSRQIIR 151 Query: 69 EAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKHNPF 125 A N + V GC + V + G +++++V + Sbjct: 152 RAARMNPTACIAVAGCYAQVSPEEVRGLEGVRVVIGTEERARIVDYVEEALHADGVVEEI 211 Query: 126 LSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 ++ + + P R A+LKI +GC + C+FCIIP RG + SRP+ V E + Sbjct: 212 TDVMQARAFEDIPLHGVPHRTRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREME 271 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 +L AG +E+++ AYG+D+ R + + RL + Sbjct: 272 KLAAAGFREVVLTGIHLGAYGIDLPQRPTLADACRTALRTKEV--------RRLRLGSLE 323 Query: 240 PYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 +D++ L+ E + P+L +PLQ S +L+ M R + R P Sbjct: 324 SVELSEDLLSLVRTEPRFAPHLHLPLQAGSDNVLRAMNRRYDTAAFAQLLADVRRAVPGA 383 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFPGETEEDF LDF++ R+ F YS G A DQ+ V+ E Sbjct: 384 AISTDIIVGFPGETEEDFTAGLDFVRAMGFARMHVFPYSARRGTPAARRTDQIAPPVRRE 443 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R R L ++++ + +G V+ + + A G + + + + V Sbjct: 444 RAARMQALAEEMAEAYHRAALGTVDEVLFETEHDGVADGLTGTY-------IRVYTDAAV 496 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 G+++ +++ +WG RV Sbjct: 497 PRGELVPMRLVRLCRDGVWGERV 519 >UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYJ0_9FIRM Length = 440 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 128/447 (28%), Positives = 217/447 (48%), Gaps = 36/447 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K ++ GC N DSE I L++ G ++AD+V++NTC ++A + +G Sbjct: 8 KYNIITFGCQMNERDSESIAGILKSHGLTSAS-IEEADIVVINTCSIRENANNKFYGTLG 66 Query: 69 ---------EALNENGKVIVTGCLGAKED---QIREVHPKVLEITGPHSYEQVLEHVHHY 116 + ++ V V GC+ + + ++ P V I G H+ ++V + + Sbjct: 67 IVKNIKKKLKKNGDDLVVCVCGCMMQEGEVVEDLKARFPFVDVIFGTHNIDRVYDLIIKT 126 Query: 117 VPKPKHNPFL---SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + + + + E V +H A++ I+ GCN+ CT+CI+P RG SR + + Sbjct: 127 IETKRREIEILENAEIKEMPVDRVNKHKAFVNITFGCNNFCTYCIVPYTRGREKSRSLDK 186 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 +L E V G KE+ + Q+ ++Y NGE + + + SK+ Sbjct: 187 ILGETADAVSLGAKEVTFLGQNVNSY--------RGENGE----NFRDVLVEASKIQGLE 234 Query: 234 RLHYVYPYPH--VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ ++ +P D++I +M+ KI+P++ +P+Q S ILK M R +R L I + Sbjct: 235 RIRFMTSHPKDLTDELIDVMSLDKIMPHIHLPVQSGSSEILKRMNRHYDRERYLEIIDKI 294 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 + ++ + + IVGFP ETEEDF LD ++ AR D F YS A QV Sbjct: 295 YSLNEDIAITTDIIVGFPTETEEDFSKTLDLVRRARFDAAFTFMYSKRRNTKAANFDGQV 354 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 R++ +L + IS E+ ++ +GR I V++D+++ + A GRS PE V Sbjct: 355 DRVEMGRRFDMLSELLKDISFEKNKKFIGRRIKVMVDKIEGDNAEGRS----PEF-KLVK 409 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWG 438 G N+K GDIL V V+ A + L G Sbjct: 410 FYG-KNIKKGDILDVVVDRASPFSLSG 435 >UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDC7_ANAPD Length = 431 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 109/446 (24%), Positives = 201/446 (45%), Gaps = 33/446 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + ++LGC N +SE + + +GY+ ++AD+ ++NTC + + ++S + Sbjct: 2 KNTFNIITLGCKVNQYESEAVEEIFQAKGYE--KKQNNADIYVINTCTVTNMSDRKSRQM 59 Query: 67 IGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH-- 122 I A +N + V GC + + V + G + E+V++ + + K Sbjct: 60 ISRARRDNPEAVIAVMGCYSQVKPEEVAAIEGVDVVLGSRNKEEVVDLCENVLQNKKVID 119 Query: 123 -----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + ++ + AY+KI +GCN C++C+IP RG++ SR + + E Sbjct: 120 KVLSFSETKTIEELEISNQEAMTRAYMKIQDGCNMYCSYCLIPYARGNIASRDMDSIKKE 179 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 AKRL G KEI++ ++YG D+++ TS++ + E++SK RL Sbjct: 180 AKRLAQNGYKEIVLTGIHVASYGKDLRN----------GTSLIDVIEEVSKTDGIERIRL 229 Query: 236 HYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P D + M A K + + LQ S ILK M R ++ RE+ Sbjct: 230 SSMEPRHITRDFLERMKATEKACDHFHLSLQSGSDEILKAMNRKYDTKIFKEKVDLIREV 289 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P L + IVGFP ETE++ + DF+KE + + FKYS +G A ++ +V Sbjct: 290 FPNAGLTTDIIVGFPTETEKNHEETKDFVKEIKFAKTHLFKYSKRDGTKAASMKPEVNGN 349 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAVYL 412 +K+ER +++ L+ ++G+ + V+ + E G S + + Sbjct: 350 IKKERLKELEAIEEVNRLNFLKNQIGKTLSVLFESKSDMEGYKSGYSTNY-------LRV 402 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 N + ++ +I V + +L G Sbjct: 403 NVKDDIGDNEIRDVLITEIKNDELIG 428 >UniRef50_B6GBU3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBU3_9ACTN Length = 453 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 115/449 (25%), Positives = 203/449 (45%), Gaps = 28/449 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE----- 62 + GC NL DSER+ L + G DAD+VI TC ++A Sbjct: 10 KTYFIRTFGCQMNLHDSERVSGLLDSLGCLQALDPKDADIVIFMTCCVREAADTRLYGQC 69 Query: 63 -SLEAIGEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S +++ + + V V GC+ ++ + + V I G HS V + + Sbjct: 70 SSCKSLPASPSGRRVVAVGGCIAQRDGEGLLTNLDNVDVIFGTHSIAHVGDLLADAFADG 129 Query: 121 KHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + + P H A++ I GCN+ C++CI+P +RG SRP+ E++ Sbjct: 130 DRHVRVEEIDSGAATEMPWHRETAYHAWVPIMTGCNNFCSYCIVPYVRGREKSRPMEEIV 189 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTR 234 E LV GV+ + ++ Q+ ++YG D L ++ + G+ Sbjct: 190 DEVTGLVRQGVRSVTLLGQNVNSYGRDHGSAP----------RFAELLRRVGETGVERIY 239 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +P + + I +AE ++P L + +Q S RILKLM R + ++ L + + R+ Sbjct: 240 FTSSHPKDLLPETIDAIAEVPAVMPQLHLAVQSGSSRILKLMNRKYTREQYLDLVDRVRD 299 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++ L + IVGFPGETEEDF+ + + EA+ + F YS G A + D P Sbjct: 300 RIPDIALTTDIIVGFPGETEEDFEQTVTLVDEAKFAQAFTFIYSKRAGTPAAEIDDPTPR 359 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAV 410 V ++R++R ++ + + + Q +G + ++I+ ++ G+S + + V Sbjct: 360 SVIQQRFDRLVRHVETTAFDYNQRFLGTTVPMLIEGTSKKNDAVLQGKSPWNQT-VHCPV 418 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGS 439 + G IL V+V+ A + L GS Sbjct: 419 PEGMDARQLIGKILDVRVDAARTWYLSGS 447 >UniRef50_Q2LVR5 TRNA 2-methylthioadenosine synthase-like protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVR5_SYNAS Length = 451 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 112/446 (25%), Positives = 186/446 (41%), Gaps = 29/446 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K +LGC N +SE + L GY +VP AD I+NTC +S + I Sbjct: 18 KAAIATLGCKVNQYESEGLGEALTRRGYTMVPFSSVADCYIINTCTVTARTNYQSRQIIR 77 Query: 69 EALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 +A+ N ++VTGC P V I G +Q+ + + + + Sbjct: 78 KAIRNNPEAVIVVTGCYAQTAPAEIAGIPGVTLIAGHAEKDQIPDLIARLLKERLEIRVG 137 Query: 127 SL------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + + A+LKI +GCN C++CIIPS RG S G VL + Sbjct: 138 DIGQTRQFSSLAATRFKDHTRAFLKIQDGCNAWCSYCIIPSARGRSRSLAEGSVLEQLAH 197 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 + G +E+++ AYG D ++ S+V L ++ + RL + Sbjct: 198 MGRTGYREVVLTGIHLGAYGQDFSPQS----------SLVDLLRKVEEQHPVERLRLSSI 247 Query: 239 YPYPHVDDVIPLMAEGKI-LPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P DD I L+ + + P+L IPLQ IL MKR + +++ P+ Sbjct: 248 EPTEISDDFIALLRQSALLCPHLHIPLQSGDDSILTRMKRHYTTSFFKDLLEKLCRAIPD 307 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 L + I GFPGE E F+ ++ ++ + + F YS G A A+PDQV + K+ Sbjct: 308 LAIGIDVIAGFPGEGEAAFERTVELIESLPVAYLHVFPYSVRPGTPAAAMPDQVSPDEKK 367 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYLNG 414 +R L + + GR + V+++E E + G S P + + Sbjct: 368 KRAEILRTLGTRKREAFARRFHGRSLRVLVEERRERSSGLRKGFSGNYLP-----ILMTN 422 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + +++V++E+ D + G Sbjct: 423 ADASQVNQLVQVQIENIDGTRISGRI 448 >UniRef50_A3EVU0 RNA modification enzyme, MiaB family n=3 Tax=Leptospirillum RepID=A3EVU0_9BACT Length = 483 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 167/451 (37%), Positives = 256/451 (56%), Gaps = 28/451 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 SK +G VSLGCPKNLVD+E ++ L +G+ V+P ++A++++VNTC F+ A + Sbjct: 29 SKGLKAKTVGIVSLGCPKNLVDTETMIHSLSEKGFRVIPDLEEAEVIVVNTCSFVTDARK 88 Query: 62 ESLEAIGEAL----NENGKVIV-TGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ + E N K++V TGCL ++ +++ + P+V + P + E + Sbjct: 89 ESIDTLLEMAQYKENGKAKILVGTGCLVSRYREELPGLLPEVDMLLSPSEEVSIGELLSS 148 Query: 116 YVPKPKHN----PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K S +P + +LTP H AYLKISEGC+H C+FC IP RG VSR Sbjct: 149 PESKTSLPSTPLILPSSIPFRRKRLTPNHRAYLKISEGCDHTCSFCAIPLSRGLQVSRTR 208 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG- 230 +L E + + D GV+E+ +I+QD + YG D++ G + L E++ ++G Sbjct: 209 ESLLEEVRMMADEGVREVTLIAQDLTRYGSDLEDGEG----------LPRLLEEIDRIGR 258 Query: 231 -IWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W RL Y YP D ++ ++ + IL YLDIP QH S +LK M RPG+ + + I Sbjct: 259 IPWVRLLYAYPTQVTDRLLKVIRDSSTILKYLDIPFQHVSGTVLKRMNRPGNRESTMRLI 318 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R I P++TLR+TFIVGFPGETEE+F + +FLK +RLD VG F +S EG + + Sbjct: 319 DRIRRILPDITLRTTFIVGFPGETEEEFLEIEEFLKWSRLDHVGVFPFSREEGTPSFDMD 378 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPE 405 Q+P +K +R R M +Q+ IS E+ ++ +G+ + V+I+ E+ + GR AP+ Sbjct: 379 GQIPSRLKTQRRKRLMGVQKAISLEKKKDWLGKVMPVLIEGPSEQSPLILSGRLPGMAPD 438 Query: 406 -IDGAVYLNGETNVKPGDILRVKVEHADEYD 435 IDG V + PG I+ KV+ YD Sbjct: 439 GIDGEVLVLS-GEASPGSIVSCKVKKVHAYD 468 >UniRef50_A5N6M6 Predicted oxidoreductase n=21 Tax=Clostridium RepID=A5N6M6_CLOK5 Length = 434 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 103/439 (23%), Positives = 196/439 (44%), Gaps = 23/439 (5%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 +LGC N ++E + + + Y++V + AD+ ++NTC + ++S + I A + Sbjct: 3 TLGCRVNQYETEAMAEKFIEKEYELVNFEEYADVYVINTCTVTNMGDKKSRQMIHRAKRK 62 Query: 74 N--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS---- 127 N + V GC V + G + +L V+ + +S Sbjct: 63 NSSAVIAVVGCYSQIAPDEVSKINGVDVVLGTKNKGDILHFVNKAFKDEEKIIKVSHVLK 122 Query: 128 ---LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + R A+LKI +GCN C++C+IP RG + S+ +++ E K+L Sbjct: 123 NKTFEDLNISEYQNRTRAFLKIQDGCNRFCSYCLIPFARGPVCSKEPDKIIKEVKKLQVN 182 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYP 242 KEI++ ++YGVD+ +++ + E++ K+ R+ + P Sbjct: 183 NFKEIILSGIHIASYGVDISGS----------WNLIKILEEIDKIKGIDRVRIGSIDPKF 232 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 +D+I MA K+ P+ + LQ L M R + + + R+ ++++ Sbjct: 233 FTEDIINRMASLTKLCPHFHLSLQSGCDSTLNRMNRKYTTTEYEKIVYKLRDSIKDVSIT 292 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + IVGFPGETEE+F DFL + L ++ FKYS EG A + +Q+ ++K+ER + Sbjct: 293 TDIIVGFPGETEEEFYKTYDFLNKIELSKIHVFKYSRREGTKAADMKEQIDGKIKDERSS 352 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 + ++L +++ + + +G + V+ ++ I P + + E G Sbjct: 353 KIIKLNERLENKFMNRFLGNNMDVLYEQKVSGDKI-YYEGYTPNYIKVIAESAEGENLEG 411 Query: 422 DILRVKVEHADEYDLWGSR 440 +L K+E E + G Sbjct: 412 KVLNTKLESVKEGYILGRI 430 >UniRef50_B3EPX5 Ribosomal protein S12 methylthiotransferase rimO n=11 Tax=Chlorobiaceae RepID=RIMO_CHLPB Length = 442 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 163/449 (36%), Positives = 240/449 (53%), Gaps = 28/449 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 +T I +SLGC KN VDSER++ + R +G D+AD+VI+NTCGFI A Sbjct: 7 ETMTRNRSIFLLSLGCSKNTVDSERLIGQARRKGLSFTNEPDEADIVIINTCGFIADAKT 66 Query: 62 ESLEAIGEA--LNENGKV---IVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ I A +NG++ V GCL A ++R P+V G ++L + Sbjct: 67 ESIDEILAAAEKRKNGEIEALYVMGCLSALYAAELRAELPEVDRFFGTADLPEILNILG- 125 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + L+P HYA+LK+SEGC+ C+FC IP MRG S + ++L Sbjct: 126 -------TAYDPATRFERSLLSPSHYAWLKLSEGCSRTCSFCAIPKMRGRYKSESMEDLL 178 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTR 234 EA RL GVKE+ +I+QD + YG+D+ + + L +LS L W R Sbjct: 179 QEATRLKAKGVKELNLIAQDITPYGLDLYGTS----------RLNDLMRELSDLNFDWIR 228 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y YP +VI M E I YLD+P+QH RIL MKR + ++ R+ Sbjct: 229 LLYAYPLDFPLEVIDTMRERENICDYLDMPVQHICDRILASMKRGIDKQGTIGLLESIRK 288 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVP 352 P + LR+T IVG+PGET +F+ LL F++E R DR+GCF YS E A L D +P Sbjct: 289 RNPNIRLRTTMIVGYPGETRAEFEELLQFVREFRFDRLGCFPYSHEEHTAAYDNLEDDIP 348 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 EE K+ER M+LQ+ IS ++ + + + V+++EV++ A R+ DAPE+D L Sbjct: 349 EEEKQERVGELMELQEGISEKKNRALEEKALKVLVEEVEDNLAFARTEYDAPEVDNECVL 408 Query: 413 NGET-NVKPGDILRVKVEHADEYDLWGSR 440 + +++PGD +E + Y+L G Sbjct: 409 DTAGIDIRPGDFCMATIEESSAYELVGRI 437 >UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APT3_9BACE Length = 460 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 119/457 (26%), Positives = 206/457 (45%), Gaps = 26/457 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD--ADMVIVNTCGFIDSAVQESLE 65 K +LGC N ++E + L GY++VP +D AD+ ++NTC + A ++S + Sbjct: 1 MKAALHNLGCKVNSYETEAMEQMLIAAGYEIVPFCEDEKADVYVINTCSVTNIADRKSRQ 60 Query: 66 AIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + +A N N V+ GC V + G + +++E ++ Y+ +N Sbjct: 61 MLHKAKKQNPNAIVVAAGCYVQARGDELAADDMVDIVIGNNRKNRLVEIINDYIGNNSNN 120 Query: 124 PFLSLVPE-------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + + + AY+K+ +GCN C++CIIP RG + SR +V + Sbjct: 121 EAVVDIAKTHEYEELNIYDVCEHTRAYIKVQDGCNQFCSYCIIPYTRGRVRSRRPEDVTA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDV----KHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 E +RLV+ G KE ++ S+YG+D + + ++ L E + + Sbjct: 181 EVRRLVEKGYKEFILAGIHLSSYGIDFEAPCDEAVDYRAANMPGSRLLELIEAVCSVEGV 240 Query: 232 -WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 RL P + + MAE + P+ I LQ LK M R + D K Sbjct: 241 KRLRLGSFEPRILTEAFVKRMAELEPVCPHFHISLQSGCDATLKRMNRRYTADEYEESCK 300 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R+ P + + IVGFP ET+E+F + ++L+ + FKYS +G A+ + Sbjct: 301 LLRKYFPNAAITTDVIVGFPQETDEEFAITKEYLERIHFYEMHVFKYSRRKGTAADRMDG 360 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV----DEEGAIGRSMADAPE 405 QVPE VK R ++L++++S E + +G V+ +EV D+ G + Sbjct: 361 QVPEPVKTARSAGLLELEKRMSREYRESALGSIQEVLFEEVAGTCDDCGTSVITGHTKTY 420 Query: 406 IDGAVYLNGETNVK-PGDILRVKVEHADEYDLWGSRV 441 I+ V L + +++ I VK+EH + G V Sbjct: 421 INVHVKLPADMSLEYINKICNVKLEHLSDD---GEWV 454 >UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 Length = 474 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 115/449 (25%), Positives = 205/449 (45%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N DS +I L T G ++ + +DAD++++NTC + A ++ Sbjct: 3 KKLHIKTWGCQMNEYDSSKIADLLGSTHGLELTDNAEDADVLLLNTCSIREKAQEKVFHQ 62 Query: 67 IGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + + V GC+ ++E + IRE V I GP + ++ E + Sbjct: 63 LGRWKMLKEAKPDLIIGVGGCVASQEGEHIRERASFVDIIFGPQTLHRLPEMIDSARSSH 122 Query: 121 KHNPFLSLVPEQGVKLTPRHYA-----YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 +S + P A ++ I EGCN CT+C++P RG VSRP +VL Sbjct: 123 GPVVDVSFPEIEKFDRLPEPRADGATAFVSIMEGCNKYCTYCVVPYTRGAEVSRPCDDVL 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E +L GV+E+ ++ Q+ +AY R +G S L ++ + R+ Sbjct: 183 FEIAQLAAQGVREVNLLGQNVNAY------RGATFDG--GICSFAELLRLVAAIDGIDRI 234 Query: 236 HYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + +P DD++ + + +++ +L +P+Q S RIL LMKR + A I++ R Sbjct: 235 RFTTSHPIEFSDDIVAVYEDTPELVSFLHLPVQSGSDRILNLMKRTHTALEYKAIIRKLR 294 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P++ + S FIVGFPGET++DF+ + + E D F +S G A + D V Sbjct: 295 RARPDIQISSDFIVGFPGETQQDFEQTMQLIAEVDFDMSYSFIFSARPGTPAADMLDDVA 354 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 EE K++R + Q + + +G ++++ + + ++ E + V Sbjct: 355 EEEKKQRLYILQERINQQAMRYSRHMLGTVQRILVEGTSRKNVME--LSGRTENNRVVNF 412 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ + G + V++ L G V Sbjct: 413 AGQPEM-IGRFVDVEITGVLPNSLRGVVV 440 >UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT8_9BACT Length = 416 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 152/428 (35%), Positives = 233/428 (54%), Gaps = 26/428 (6%) Query: 23 DSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNENG-----KV 77 DSE + E + +V ++ D+ IVNTCGFI AV+ES++ I + K+ Sbjct: 2 DSEVLAGRFEPENWTLVDRVEECDIAIVNTCGFIQPAVEESIDVILDLEEMKAQGTLEKI 61 Query: 78 IVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKL 136 V GCL + + +++ P V ++ + + S + + Sbjct: 62 CVVGCLVNRYGEDLKKEFPSVDLWAEAEDWDSLSRALG----------IDSPRRGRRILT 111 Query: 137 TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDT 196 YLK+ EGC+ RC+FC IPS+RG L SR ++++EA +L + G KE+ ++ QD Sbjct: 112 ESPWTRYLKVGEGCDTRCSFCTIPSIRGPLRSREPKDIVAEAVKLAEEGAKELCLVGQDL 171 Query: 197 SAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIP-LMAEGK 255 + YG D+ R + ++ E IW RL Y++P + + ++ + Sbjct: 172 TVYGSDLSKRGS-------LSGLLDAMEAELPEDIWLRLFYLHPSRVDEASLERVLNSSR 224 Query: 256 ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEED 315 ILP+LDIP+QH +L+ M RP + K R + P+ R+T +VGFPGETE+ Sbjct: 225 ILPWLDIPIQHVDADVLRRMNRPPVEEHIRKLFKAGRRMFPDFAFRTTIMVGFPGETEKA 284 Query: 316 FQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERL 375 FQ LLDF+++ DR+G F + P EG A +PDQ+P++ K+ R+ M+LQQ IS R Sbjct: 285 FQSLLDFVEDVAFDRLGAFTFCPEEGTPAALMPDQIPQDEKDRRYAELMELQQGISLARQ 344 Query: 376 QEKVGREILVIIDEVDEEGAI--GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADE 433 + VG+E+ V+I+EVDEE GRS DAPEIDG V ++G + PGD++RV + A E Sbjct: 345 RGFVGKEMDVLIEEVDEEDGTRWGRSFRDAPEIDGLVSISGAKDDVPGDMVRVSITDASE 404 Query: 434 YDLWGSRV 441 YDL+G RV Sbjct: 405 YDLFGERV 412 >UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bacterium Ellin514 RepID=B9XHC1_9BACT Length = 556 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 162/555 (29%), Positives = 268/555 (48%), Gaps = 117/555 (21%) Query: 2 SKVTPQP-KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 S +P ++G +SLGC KNLVD+E +L L G ++ AD+VIVNTC FIDSA Sbjct: 4 SDTNKRPVRVGLISLGCAKNLVDAEIMLGSLMKGGVEITNDATQADVVIVNTCSFIDSAQ 63 Query: 61 QESLEAI------GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEIT------------ 101 +ES++ I EA N +IV+GCL + +++ ++ P+V Sbjct: 64 EESVDTILQSEEVREANNRGQGLIVSGCLPQRFREELPKLLPEVDVFMGIDQVAQVTEIV 123 Query: 102 -----------------GPHSYEQVLEHVHHY---------------------------- 116 G +S ++E + Sbjct: 124 HKALDHRAEKLKNAKGKGQNSKTNIVEKIAELDKARAELKHEDEESLRGTEKFGKTKTVV 183 Query: 117 ------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + ++ +LTP+H+AY+KI+EGCNH C+FCIIP MRG SR Sbjct: 184 APAVPLMDVNARPVYIPDFETPRFRLTPKHFAYVKIAEGCNHPCSFCIIPRMRGSHRSRV 243 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVK------------TS 218 +++ EAK+L+ GVKE+ +ISQD++ YG+D++ + P K T+ Sbjct: 244 QADIVREAKQLIADGVKELNLISQDSTYYGLDLRPNHSRNIASPEKFNSAAKSLPADATT 303 Query: 219 MVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLM 275 + +L +L+ + W RL Y +P D++I +A+ K+ Y+D+PLQH +L+ M Sbjct: 304 LCTLLRELNAIPGDFWIRLLYTHPAHWTDELIQTIAKCKKVARYVDMPLQHIHENMLERM 363 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 +R S + I++ R P + +R+TFIVGFPGETE F+ LL+F+++ + +R+G F Sbjct: 364 RRETSEQYIVNLIQRIRAGIPGIAIRTTFIVGFPGETETYFKTLLNFIRDTKFERLGVFT 423 Query: 336 YSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID------- 388 YS +G A + Q+ +++K +R M Q +++ + + VG+E+ V+++ Sbjct: 424 YSKEDGTRAGNMEGQLADKIKSKRRELAMAEQLKVAKQVAESFVGKELRVLVEAEASAKE 483 Query: 389 ----------------------EVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRV 426 ++ + RS ADAP+IDG VY+ G N+ G+ +V Sbjct: 484 LKNAKISSWEHGLIRGEDKQLGQLKGRYLVARSEADAPDIDGRVYVRG--NLPIGEFAQV 541 Query: 427 KVEHADEYDLWGSRV 441 +V +YDL + Sbjct: 542 RVIGHTDYDLIAEPI 556 >UniRef50_C7MNF9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=2 Tax=Coriobacteriaceae RepID=C7MNF9_CRYCD Length = 448 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 122/452 (26%), Positives = 206/452 (45%), Gaps = 33/452 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + GC N DSERI L + G V S +AD I TC + A + + + Sbjct: 7 FSITTFGCQMNKHDSERIAGLLESLGSIAVSSPAEADFSIFMTCCVREKADERLMGQVAT 66 Query: 70 ALNENGK---------VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 N+ + V + GC+G ++ +++ V + G H+ E + + + + K Sbjct: 67 MKNDAPRKGSPFGRRFVAIGGCIGQRDGEKLLTQLDNVDVVFGTHNMETLPQLLESAIEK 126 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + P A+L I+ GCN+ CTFCI+P +RG +SRP+ E+ Sbjct: 127 GSRRAEIIDGRAEFHDELPEDREHPWAAWLPITVGCNNFCTFCIVPYVRGREISRPLDEI 186 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 +A+ V GVKEI ++ Q+ ++YG D+ ++ + ++ GI Sbjct: 187 ADQARAYVQQGVKEITLLGQNVNSYGRDLYGSP----------RFDAVLDAVAASGIERI 236 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P D VI A ++P L +P Q S RIL M R +++ I++ R Sbjct: 237 RFATSHPKDLTDGVIERFATLPNLMPALHLPAQSGSNRILAAMNRRYTIEHYEGLIEKLR 296 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P + L + IVGFPGETE+DF+ + +K ++V F YS +G A LPD P Sbjct: 297 VVRPYIALSTDIIVGFPGETEDDFEQTCELVKRVGYNQVFTFIYSRRDGTPAARLPDDTP 356 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 V +ER++R + + ++ + R + + R + V+I+ + + A MA + V+L Sbjct: 357 RSVIQERFDRLVSIVREGALARNRLSLDRTMPVLIEGISKRNAS--MMAGKSPYNQTVHL 414 Query: 413 NGETNVKP----GDILRVKVEHADEYDLWGSR 440 G I+ +E A + L GS Sbjct: 415 PLPAGTSLQQWEGTIVTAHIEEARTWYLRGSM 446 >UniRef50_D1C3B2 MiaB-like tRNA modifying enzyme n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3B2_SPHTD Length = 449 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 115/431 (26%), Positives = 194/431 (45%), Gaps = 18/431 (4%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 V +P+ +LGC N D + LR G V +A++ IVNTC A + Sbjct: 13 HVRRRPRFAICTLGCKLNQSDEADLRRSLRQAGLQEVDFGSEAEVYIVNTCTVTQLADRR 72 Query: 63 SLEAIGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S + + A +N + +V GC A P+V + G V++ + + Sbjct: 73 SRQMLRRAHRQNPEALVAAIGCYPAVNPDELHAMPEVDIVVGSIEKATVVDEILGRL-DW 131 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 ++ F S P + V+ R +KI EGC CT+CIIP RG + EV+ + Sbjct: 132 ENQAFDSDEPVEHVET--RTRRMIKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRRVQE 189 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH--YV 238 +D G +E+++ Y RT + L E + + RL V Sbjct: 190 AIDEGYREVVLTGTHVGTYKWPEGDRT---------LRLADLLELVLEATTIERLRVTSV 240 Query: 239 YPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P+ + I L+ ++ P+L + LQ S +L+ MKR + + +++ RE P++ Sbjct: 241 GPHEIDERFIALVNHPRMAPHLHMALQSGSETVLRRMKRWYNTRQFRRAVRRLREEVPDI 300 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFPGET+E+F DF++E ++ F +SP + A A+PDQV VKE Sbjct: 301 AITTDVIVGFPGETDEEFAETCDFVREMGFAKLHVFPFSPRKDTPAAAMPDQVHPRVKER 360 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS-MADAPEIDGAVYLNGETN 417 R + ++ A + +GRE+ V++++V E+ GRS + VY+ G+ Sbjct: 361 RAAELRAIGDELHAAFVARHLGREVRVLVEQVAEQLPDGRSLWSGYTGNYLRVYVPGDPG 420 Query: 418 -VKPGDILRVK 427 + V+ Sbjct: 421 EDLENRFVSVR 431 >UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJG9_9BACT Length = 423 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 122/438 (27%), Positives = 203/438 (46%), Gaps = 30/438 (6%) Query: 19 KNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE-----ALNE 73 N DS RI G+ ++ D +IVNTC + ++ AIG Sbjct: 1 MNEYDSLRIAAVFDKIGFTEAEEMEEGDYLIVNTCSVREKPQHKAESAIGRFRQIKRRRP 60 Query: 74 NGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQ 132 K+ GC+ +E + + + + + + G ++ E V H + + Sbjct: 61 EVKIGFCGCVAQQEGENLLKTNKDIDFVVGTDGLHRLEEVVAHVEAGERLSDTQVNEGGL 120 Query: 133 GVKLTPR---HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEI 189 + + R +++ I +GCN+ C++CI+P +RG SR E++ E K L D G +EI Sbjct: 121 EIDIFNREVSVSSFVTIMKGCNNFCSYCIVPYVRGREKSREQSEIIDEIKYLADKGAREI 180 Query: 190 LVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDV 247 ++ Q+ ++YG + S L +++S + R+ +V +P +++ Sbjct: 181 TLLGQNVNSYGTALTD----------PVSFPELLDKVSDVEGIKRIRFVTSHPKDFSNEL 230 Query: 248 IPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 I +M KI YL +PLQ S +L+ M R + D R+ + +E+ P+L L S FIV Sbjct: 231 IDVMRGNDKICEYLHLPLQSGSNAVLQKMNRKYTYDHYKERVLRAKEMIPDLALSSDFIV 290 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 GFPGETEEDFQ + L+E R D + F YS G A + D VP EVK+ R + + Sbjct: 291 GFPGETEEDFQSTMKALEEIRYDMIYAFNYSTRPGTKAESFNDDVPLEVKKMRLAKLLDA 350 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNGETNVKPGDI 423 Q++I AE + V+++ ++G GR+ + V + ET + GD Sbjct: 351 QKRIIAENSAAYQDLVVEVMVEGESKKGAGQYSGRNRQNR-----VVNFSSETILSSGDF 405 Query: 424 LRVKVEHADEYDLWGSRV 441 + VK+ L G RV Sbjct: 406 VNVKITEPRPNSLLGERV 423 >UniRef50_B8J4P8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4P8_DESDA Length = 442 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 164/453 (36%), Positives = 240/453 (52%), Gaps = 32/453 (7%) Query: 1 MSKVTPQPKIGF--VSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDS 58 M+ Q KI +SLGCPKN VDSER+L L V AD+V +NTCGFID Sbjct: 1 MTSANKQKKIKVWSLSLGCPKNRVDSERLLGSLGAP-VSHVEHMGRADLVFINTCGFIDP 59 Query: 59 AVQESLEAIGEA------LNENGKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVL 110 AV+ES+ A+ +A ++ + V GC+ + + + E P+V ++ Sbjct: 60 AVRESVRAVLDAGQRLGRCSKKPLLAVGGCMVGRYGAENLAEDLPEVDLWLPTADLDRWP 119 Query: 111 EHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 V + P P + + + T YA+LKI EGC H+C FC IPS+RG L S P Sbjct: 120 GMVAEALALP--TPPVRMPGGGRLLSTGPSYAWLKIGEGCRHKCAFCTIPSIRGGLHSLP 177 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 ++ EA+ L+ GV+E+ +++QD +A+G D+ + G + SL E+L+ L Sbjct: 178 AEYIVDEARALLGQGVRELALVAQDLTAWGADLGMKNG----------LPSLLEKLAALD 227 Query: 231 I--WTRLHYVYPYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W RL Y+YP +++ L+ + +LPYLDIPLQHA P +L M RP + + Sbjct: 228 GLAWLRLLYLYPSGVTPELLALIRDTGAPLLPYLDIPLQHAHPDVLSRMGRPFAGNP-RR 286 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + R+ P LR+TFIVG+PGET+E F+ L F++E+ VG F Y +G +A Sbjct: 287 VLDAVRQNLPHAALRTTFIVGYPGETDEQFESLCRFVEESAFQHVGVFAYQAEDGTEAAT 346 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADA 403 LPDQVP+ VK+ R + M +Q IS L VG + V++D E GR A Sbjct: 347 LPDQVPDAVKQWRRDTLMDIQADISERLLAAHVGSRMQVLVDAPHPEWPGLHSGRVWLQA 406 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDL 436 PE+DG Y++G V PG ++ + EYDL Sbjct: 407 PEVDGITYVSGP-GVAPGALVECDIVENTEYDL 438 >UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZF9_ABIDE Length = 449 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 119/455 (26%), Positives = 206/455 (45%), Gaps = 35/455 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA 70 F++LGC N ++E I + GY++ + AD+ IVNTC + A ++S + + A Sbjct: 2 AFLTLGCKVNAYETESIKEMFKNNGYEIKQFNEVADIYIVNTCTVTNIADRKSRQMLHRA 61 Query: 71 LNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSL 128 N V+ GC E V + G VL V Y+ K F Sbjct: 62 KKLNPEAVVVAVGCYVQAPQSKLEDDDLVDILVGTRGKSSVLSLVEEYIRSNKTRDFKHN 121 Query: 129 VPEQGVKLTP-------------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 V + G + ++ A +KI +GC+ CT+CIIP +RG + SR + ++ Sbjct: 122 VIKSGEENKDWAYDSGEVNAGGGKNRANIKIQDGCDQFCTYCIIPFVRGRIRSRDMEGIV 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWT 233 E RLV AG +E+++ +YG D+ ++ M+ L +L+K+ Sbjct: 182 EETDRLVKAGFREMVLTGIHIGSYGRDIDG----------ESRMLELLTELNKVEGDFRI 231 Query: 234 RLHYVYPYPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL V P ++ + L+ K+ P+ + LQ S +LK M R + L +K + Sbjct: 232 RLGSVEPRLITEEFLEGLVKLKKVCPHFHLSLQSGSTTVLKRMNRHYGAEEYLNSVKLLK 291 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + + + IVGFPGET+E+F+ + F+KE +V F YS +G A + +Q+ Sbjct: 292 KYYDRPGITTDIIVGFPGETDEEFEETVAFVKEVGFLKVHVFPYSKRDGTYAAKMNEQIA 351 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDGA 409 E+K+ER N +++ +++S + L+ G V+++E E+ + S Sbjct: 352 PEIKKERENILIKVCEEVSEKYLESFNGDMEQVLLEEEIKGREDYVMAHSARYIEVAVPK 411 Query: 410 VYLNGETNVKPGDILRVK---VEHADEYDLWGSRV 441 + L+G N + L VK + + L G + Sbjct: 412 MILSGRENADK-EFLNVKGMMLSDTSDGALKGMMI 445 >UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=4 Tax=Treponema RepID=MIAB_TREPS Length = 456 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 108/454 (23%), Positives = 207/454 (45%), Gaps = 27/454 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 F + GC N+ +S + L G+ D++I+NTC +A +G Sbjct: 3 YFFETYGCQMNVAESASVEQLLLARGWTKAVDAQTCDVLIINTCSVRITAETRVFGRLGL 62 Query: 70 ALNENGK----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + K +I+ GC+ + D+I++ P++ + G ++ + K Sbjct: 63 FSSLKKKRAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFESIFQEIEQKLTQKD 122 Query: 125 FLSLVPEQGVKLTP----RHYA----------YLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + + P R +A ++ I GCN+ C+FCI+P +RG +SR Sbjct: 123 YRFEFISERYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSFCIVPYVRGREISRD 182 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAY-GVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 + +L E L + GV+EI ++ Q+ ++Y G D + + +V CE ++ Sbjct: 183 LDAILQEVDVLSEKGVREITLLGQNVNSYRGRDREGNIVTF--PQLLRHLVRRCEVKDQI 240 Query: 230 GIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W R +P DD+I +A E ++ + +P+QH + +LK M+R + ++ L+ + Sbjct: 241 K-WIRFVSSHPKDLSDDLIATIAQESRLCRLVHLPVQHGANGVLKRMRRSYTREQYLSLV 299 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + + P + L + ++GFPGETEEDF+ LD ++E D + Y+P EG A P Sbjct: 300 GKLKASVPNVALSTDILIGFPGETEEDFEQTLDLMREVEFDSAFMYHYNPREGTPAYDFP 359 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG 408 D++P+ + R R + LQ + ++++ +VG+ + V+++ + E+ Sbjct: 360 DRIPDATRIARLQRVIALQMSTTLKKMRARVGKTLPVLVESRSRNNP--EELFGHTELGE 417 Query: 409 AVYLNGETNV-KPGDILRVKVEHADEYDLWGSRV 441 L G+ + G + V+V+ L V Sbjct: 418 MTVLEGKVDPTYIGRFVDVQVKEVRGRTLRAHLV 451 >UniRef50_B8E0G0 MiaB-like tRNA modifying enzyme n=2 Tax=Dictyoglomus RepID=B8E0G0_DICTD Length = 417 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 108/440 (24%), Positives = 188/440 (42%), Gaps = 38/440 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F + GC N ++E + R G+++VP +AD++ +N+C A +++ Sbjct: 1 MRKVAFYTFGCKVNQYETENLKILARNAGFEIVPFGKEADLIFINSCAVTHVAERKARRL 60 Query: 67 IGEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I N N K+ + GC + + E + + + Sbjct: 61 INLIKNRFPNAKIALAGCYAERLNLSSEKLV-LDFVLDNKQKWEF--------------- 104 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 F V R A LKI +GCN+ CT+CI+P +RG S+P +V+ EA++LV+ Sbjct: 105 FGGSEDSAFVTSEDRARAILKIQDGCNNFCTYCIVPYLRGRERSKPFDKVMEEAQKLVEN 164 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TRLHYVYPYP 242 G KEI++ AYG D+ K ++ L +L ++ RL + P Sbjct: 165 GFKEIVLTGIRLGAYGRDLGD----------KDALSKLLLKLFEMDGLVKIRLSSIEPMD 214 Query: 243 HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 + +I L K+ + IPLQ ILK M R + + RE P++ + + Sbjct: 215 ITEGLIKLADHPKLCKHWHIPLQSGDDEILKKMNRRYDTKYFEQIVYKLREKVPDVAITT 274 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVG+P E+EE+F F + R+ F YSP A L +P EV +R + Sbjct: 275 DIIVGYPEESEENFNNTYLFAERMGFMRIHVFPYSPRPFTPAYKLKP-LPYEVITKRKEK 333 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 ++L + + + + +E+ V+++E E G + V +K G+ Sbjct: 334 LIKLSNDLWERYVSKFIEKELEVMVEERKENLYRGTTDNYI-----KVEFESNLLLKEGE 388 Query: 423 ILRVKV--EHADEYDLWGSR 440 ++V++ E +WG Sbjct: 389 YIKVRLLKVDNKEEKVWGEV 408 >UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7K6_GEMAT Length = 473 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 166/452 (36%), Positives = 248/452 (54%), Gaps = 35/452 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K G V+LGC KN VDSER L +L G + V DAD+V+VNTCGFID+A ES+EAI Sbjct: 3 KFGLVTLGCDKNTVDSERYLADLVAHGAEAVQDLRDADVVVVNTCGFIDAAKAESIEAIV 62 Query: 69 EALNEN-----GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 +A V GC+ + +D++ E P+V G ++++ + + Sbjct: 63 DAARLKDEGRCKAVFAIGCMVERHKDELLEALPEVDVFLGNSETDRLVPELVE-----RG 117 Query: 123 NPFLSLVPEQGVKLTPR---HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 SLV GV+L H YLKISEGC+H C FC IP MRG S + E++ EA+ Sbjct: 118 LIGGSLVEHPGVRLFSGDAAHVRYLKISEGCDHGCAFCAIPLMRGKHRSFALDELVREAQ 177 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHY 237 L G +EI +++QD + YG D + G + L E L + W R Y Sbjct: 178 LLEVQGAREINLVAQDLAHYGRDRRDGHG----------LPELLEALVRETSIPWIRNMY 227 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +Y ++ ++A +I+ YLD P+QH S +L M+RP R+ ++R+I P Sbjct: 228 LYSTGITPRLLEVIAAHPRIVRYLDTPMQHGSDAVLTRMRRPERQKTIRERLARYRDIVP 287 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +L +R++ IVGFPGETE+DF +L DFL+E + DRVG F YSP EG A+A+ D V + +K Sbjct: 288 DLAVRTSVIVGFPGETEDDFNILCDFLEEMQFDRVGVFTYSPQEGTRAHAMEDDVADSIK 347 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAVYLNG 414 +ER R +LQ+ I+AER + +GRE V+++ + + R+ A +IDG V+++ Sbjct: 348 QERKERIEELQRAITAERYERFLGREARVLVERRGDYPDVWMARAPWQADDIDGLVHVDV 407 Query: 415 ETN-----VKPGDILRVKVEH-ADEYDLWGSR 440 + V PG + V ++H D+YD + Sbjct: 408 PESMRKVLVSPGAFVDVTIDHVVDDYDFAATL 439 >UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=14 Tax=Desulfovibrionales RepID=MIAB_DESVH Length = 449 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 126/450 (28%), Positives = 193/450 (42%), Gaps = 28/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC N+ DS+ + L G+ P + A + IVNTC D Q+ + Sbjct: 4 RTFHIETFGCQMNVNDSDWLARALMERGFSPAPFGE-ARLTIVNTCSVRDKPEQKVYSLL 62 Query: 68 GEA-----LNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + V V GC+ + P+V + G + + V +P Sbjct: 63 GRIRQATSKKPDAFVAVGGCVAQQIGSGFFSRFPQVRLVFGTDGLAMAPQALDRLVEEPD 122 Query: 122 HN----PFLSLVPEQGVKL---TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 F PE+ L ++ I +GC++ C +CI+P RG SR G + Sbjct: 123 LKLSLLDFSEDYPERDAVLGQGAVPASVFVNIMQGCDNFCAYCIVPYTRGRQKSRATGTI 182 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + L+D G +EI ++ Q+ +++G D T+ L +++ L R Sbjct: 183 LDECRALLDRGAREITLLGQNVNSFGQDSHGDG---------TTFAQLLHKVAALPGLER 233 Query: 235 LHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 L +V P+P +V+ + P L +PLQ S RILKLM R + R L + Sbjct: 234 LRFVTPHPKDIAPEVVEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDL 293 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P++ L S IVGFPGETEEDF +D L+ F YS G A LPD++ Sbjct: 294 RAARPDIVLSSDIIVGFPGETEEDFMETMDALETVGYAASYSFCYSDRPGTRAEMLPDKL 353 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-GAIGRSMADAPEIDGAV 410 EVK ER R LQ +++ LQ+ VGR++ V+++ + + G G S V Sbjct: 354 SREVKLERLERLQTLQNRLTERCLQDMVGRKVEVLLEGMSRKPGDEGDSWQGRDPYGNLV 413 Query: 411 YLNGETNVKP-GDILRVKVEHADEYDLWGS 439 + G L V V A ++ L Sbjct: 414 NVALPQGSDVRGRFLPVVVAQAKKHSLLAE 443 >UniRef50_Q96SZ6 CDK5 regulatory subunit-associated protein 1 n=33 Tax=Eukaryota RepID=CK5P1_HUMAN Length = 601 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 116/490 (23%), Positives = 211/490 (43%), Gaps = 56/490 (11%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 Q K+ + GC N+ D+E + L+ GY + +AD++++ TC + A Q Sbjct: 99 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNR 158 Query: 67 IGEALNENGK---------VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 + + + + + GC+ + +++I V + GP +Y + + Sbjct: 159 LHQLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVA 218 Query: 117 VPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + L + E + P A++ I GC++ C++CI+P RG SRP Sbjct: 219 ESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRP 278 Query: 171 IGEVLSEAKRLVDA--------------GVKEILVISQDTSAYGVDV------------- 203 I +L E K+L + G+KE+ ++ Q+ +++ + Sbjct: 279 IASILEEVKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLS 338 Query: 204 KHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYL 260 + T + + L +Q+S++ R+ + P+P D+V+ L+ E I + Sbjct: 339 RGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQI 398 Query: 261 DIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLL 320 +P Q S R+L+ M+R S + + + RE P ++L S FI GF GETEED + Sbjct: 399 HLPAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTV 458 Query: 321 DFLKEARLDRVGCFKYSPVEGADA-NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKV 379 L+E + + F YS + A + L D VPEEVK R + + ++ + + Q V Sbjct: 459 SLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSV 518 Query: 380 GREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLNGETN------VKPGDILRVKVEH 430 G LV+++ + + A GR+ + I + N +PGD + VK+ Sbjct: 519 GCTQLVLVEGLSKRSATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQPGDYVLVKITS 578 Query: 431 ADEYDLWGSR 440 A L G Sbjct: 579 ASSQTLRGHV 588 >UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6E2_9ACTN Length = 504 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 143/479 (29%), Positives = 234/479 (48%), Gaps = 40/479 (8%) Query: 2 SKVTPQPKIG--FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 S + QPK FV+LGC KN VD++R+ L G++ AD+VI+NTC F++SA Sbjct: 27 SNASKQPKASCLFVTLGCAKNQVDTDRMRALLLKSGFEESRDASSADVVIINTCSFLESA 86 Query: 60 VQESLEAIGEALNE------NGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEH 112 ES+E + + +I+ GC+ ++ + + P+V + ++ Sbjct: 87 TSESIEVTLDLAQKRTSGITKLPIIMCGCVPSRYGAALDKELPEVSAFVKATDEDSIVGI 146 Query: 113 VHHYVP-KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 V + + F + + ++ A++KISEGC+ C FC IP +RG SR Sbjct: 147 VSDVLGIEHPTFSFSQELSARALRTIEGTSAFVKISEGCDRYCAFCAIPFIRGHYASRCP 206 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT-------------- 217 E+ SE L++ GVKEI++I QDT +G D R Sbjct: 207 EEIFSEITMLMEGGVKEIILIGQDTGIWGEDFSSRGAASVLHKDSDLHDPSSASSFDKNS 266 Query: 218 ------SMVSLCEQLSKL----GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQH 266 ++ L +++++ W R+ Y+ P +D+I + + ++LPY+DIP+QH Sbjct: 267 TQHESMNLAWLLREVARIVRPYKAWIRVLYLQPEGMTEDLIATIRDTPEVLPYIDIPIQH 326 Query: 267 ASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEA 326 + R+LK M R GS + R P++ LR+T +VGFP ET+E+ L+DF K+ Sbjct: 327 CNERLLKKMGRSGSASQLHKLFAHLRHEIPQMVLRTTGMVGFPTETDEEAAELVDFFKQE 386 Query: 327 RLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVI 386 D + F YS G A + Q+ E K ER +++ + VG + VI Sbjct: 387 EFDYMSVFSYSQELGTTAAKMRGQISAETKIERTQTLRDTAEELGFAATAKHVGEVVDVI 446 Query: 387 IDEVD----EEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ID +D ++ IG + AP+ DG V++ +T+ PGD++RVK++ A Y+L G V Sbjct: 447 IDSIDMDSPDKERIGHAWFQAPDCDGCVHIL-DTDANPGDVVRVKLKEAYCYELVGELV 504 >UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=MIAB_SORC5 Length = 498 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 121/466 (25%), Positives = 212/466 (45%), Gaps = 33/466 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P+ + GC N+ DSER+ LR GY S D+AD++++NTC + A Q+ Sbjct: 1 MPRYSITTFGCQMNVHDSERMHDVLRCAGYTEAGSADEADVLVLNTCSVREKAEQKLRSE 60 Query: 67 IGEALN-----ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHY---- 116 +G + ++V GC+ +E + + + + + GP + ++ + Sbjct: 61 VGRLARWKRERADRVLVVAGCVAQQEGERLLKQMRAIDVVVGPDNIPELPGLLGDLAIGG 120 Query: 117 ---------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + P+ P A++ + +GC+ RC+FCI+P RG Sbjct: 121 LPIARTVFDLDAPRFLVASPPSPSSSSSPRAAPTAFVTVMKGCDERCSFCIVPHTRGPER 180 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVD----VKHRTGFHNGEPVKTSMVSLC 223 RP E+++E LV AG +E+ ++ Q ++Y D + G +P ++ +L Sbjct: 181 YRPSDEIVAEIAALVAAGTREVTLLGQTVNSY-RDPLGALPRAPGASADDPDESEFAALL 239 Query: 224 EQLS-KLGIWTRLHYVYPYP--HVDDVIPLMAEGKILP-YLDIPLQHASPRILKLMKRPG 279 +++ + RL Y P+P ++ AE +LP ++ +P+Q S R+L+ M R Sbjct: 240 RRVAADVPGLARLRYTSPHPRHLTPSLVLAHAELPVLPRHVHMPVQSGSDRVLRRMIRRY 299 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 + +AR + E P LTL + IVGFPGETE+DF L ++E + FKYS Sbjct: 300 TRAEYVARTRALVEAVPGLTLSTDIIVGFPGETEDDFAATLSLVREVGFKGLFGFKYSRR 359 Query: 340 EGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS 399 A LPD VPE VK ER R + + + A L VG V+++ D+E G + Sbjct: 360 PHTPALKLPDDVPEGVKGERLARLFEESEALLAAHLSALVGTTQEVLVEGRDKERGHGGA 419 Query: 400 ----MADAPEIDGAVYLNGETNV-KPGDILRVKVEHADEYDLWGSR 440 + +++G + G+++ V + A+++ L Sbjct: 420 GGALWSGRTGRHEIAHIDGAGELDLLGEVVEVSIARANKHSLQAEL 465 >UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=MIAB_UNCTG Length = 418 Score = 403 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 112/439 (25%), Positives = 202/439 (46%), Gaps = 34/439 (7%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 ++GC N+ DS+ +++ G + +AD+VI+NTC A Q++ +G Sbjct: 5 IETIGCQMNVCDSDMLVSIFSAYGASKANNLSEADVVILNTCSVRSQAEQKAFSYLGRVK 64 Query: 72 -----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 N K++V GC+ + I++ V I G + + Sbjct: 65 EFKQKNPCIKIVVIGCMAERLGPNIKKRFSSVDLIIGAKDIGNAALKIMNLFRTDYSAKK 124 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 ++ ++ + Y+ I GC++ C++C +P +RG VS +++E +V G Sbjct: 125 VN------SEIKSKIVRYITIMRGCDNYCSYCAVPFVRGREVSINCETIVNECSSMVKNG 178 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV--YPYPH 243 +EI+++ Q+ ++Y + + SL ++ + + R+ ++ +P Sbjct: 179 AREIILLGQNVNSY-------------QYEDVNFASLIKKTAAIENLERIRFMTNHPKDL 225 Query: 244 VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 DD+I +MA E K+ P++ IP+Q AS +ILK M R S + L IK+ R P++++ + Sbjct: 226 SDDLIKIMATEPKVCPHIHIPMQSASDKILKAMNRKYSYEHYLGLIKKLRTAVPDVSVTT 285 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVGFPGET+EDF+ L +K R + F+YSP A + D VP E K+ R Sbjct: 286 DIIVGFPGETDEDFEDTLKAVKTIRFGGLYVFRYSPRPDTKAAEMIDDVPFEEKKRRHAV 345 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 ++ +IS E + E +G V+ +E+ R+ V+ G G Sbjct: 346 VLKESNKISIEIVSEMLGSTQQVLAEEIKNGIIKARTKNGR-----KVFAEGRKEY-IGK 399 Query: 423 ILRVKVEHADEYDLWGSRV 441 + V ++ A L+G V Sbjct: 400 HINVNIKEAKINSLFGDIV 418 >UniRef50_B0PFX8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0PFX8_9FIRM Length = 441 Score = 403 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 111/445 (24%), Positives = 185/445 (41%), Gaps = 30/445 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K F +LGC N +++ + + GY++VP AD+ +VN+C S Q++ + Sbjct: 1 MKAAFYTLGCKVNQYEAQILAQQFADAGYEIVPPEAPADVYVVNSCTVTASGDQKTRRVL 60 Query: 68 GEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY-------VP 118 + V++TGC + I G ++E V V Sbjct: 61 RRFRTLCPDATVVLTGCYPQAFPDDAARLAEADVIAGARDRAALVELVRRARETRGRIVA 120 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 H P + R A++KI +GC+ C +CIIP RG + S+P GE+ +E Sbjct: 121 VAPHERGEPFEPMRAAAFRERTRAFVKIEDGCDRYCAYCIIPQARGPVRSKPPGELRAEL 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 + L AG +E +++ + +YG ++ R ++ E +G RL Sbjct: 181 EGLARAGYREAVLVGINLPSYGRELGLR------------LIDAVELACAVGGIERVRLG 228 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P DD I MA K+ P + LQ L M+R + ++ R Sbjct: 229 SLEPELLTDDDIARMARQPKLCPQFHLSLQSGCDATLARMRRHYDTAEYMRIVRALRAHF 288 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 + + +VGFPGET+ +F L F++ L + F YS G A +P Q+P V Sbjct: 289 ENCAITTDVMVGFPGETDAEFGQSLCFVESLGLAKAHVFAYSRRPGTRAADMPGQLPGAV 348 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 KE R R ++ + A L + GR + V+ + D G + P V + + Sbjct: 349 KEARSARMIEATDRTRAAFLAGQAGRTVGVLFETRDGGAFDGYAENYTP-----VRVFTD 403 Query: 416 TNVKPGDILRVKVEHADEYDLWGSR 440 +++ G I RV + AD G+ Sbjct: 404 EDLR-GQIRRVLITSADGARCVGTL 427 >UniRef50_Q1MQJ5 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Desulfovibrionaceae RepID=RIMO_LAWIP Length = 440 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 155/455 (34%), Positives = 242/455 (53%), Gaps = 37/455 (8%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVV--PSYDDADMVIVNTCGFIDS 58 M+ +P + +SLGCPKN VD+ER+L L G + ++AD V +NTC FI + Sbjct: 1 MNSHSPSLRCHAISLGCPKNRVDTERLLGSL---GIPLTFIDYPNNADFVFINTCSFIHT 57 Query: 59 AVQESLEAIGEA------LNENGKVIVTGCLGAKEDQ--IREVHPKVLEITGPHSYEQVL 110 AVQES+ I + L+E +IV GC + + +++ P+V E Sbjct: 58 AVQESVNTILQLVADVEELSEKPFIIVAGCFVGRYGEKILKKDIPEVDLWLDNKEIESWN 117 Query: 111 EHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 E + + N + + + T + YA+LKIS+GC H C+FC IPS+RG L S Sbjct: 118 EQILLAL-----NIKSTFLVTDRIITTGKSYAWLKISDGCQHSCSFCTIPSIRGSLHSYS 172 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I E++ E++ ++D GVKE+++++QD +A+G D+ + G + +L + L L Sbjct: 173 IDELVKESRHILDQGVKELVLVAQDVTAWGRDLPNNYG----------LKTLLDHLLVLD 222 Query: 231 I--WTRLHYVYPYPHVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 RL Y+YP D + + +PY D+P+QHA P IL M RP + + Sbjct: 223 GLKRLRLMYLYPTGLTKDFLLYLKSVGEPFVPYFDVPIQHAHPDILSCMGRPFAKNP-RK 281 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 I R + PE LR++ I GFPGETE L F++E + +G F Y G A Sbjct: 282 VIDNIRSVFPEAVLRTSVITGFPGETEGHHVYLSKFIEEIKFQHLGIFSYVAEAGTPAAV 341 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADA 403 +P+QV E+VKE+R M++Q +IS + L+ VG+ + +I+D V E GR+ A Sbjct: 342 MPNQVGEKVKEQRKAELMEIQLKISEKWLKNFVGKRLSLIVDNVHPEWPELYTGRAWFQA 401 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 PE+DG VY++G N+KPG+++ + + YDL Sbjct: 402 PEVDGMVYISGP-NIKPGELIEADIMESHSYDLVA 435 >UniRef50_A5GE34 MiaB-like tRNA modifying enzyme n=5 Tax=Geobacter RepID=A5GE34_GEOUR Length = 444 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 104/449 (23%), Positives = 191/449 (42%), Gaps = 25/449 (5%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 + T + +LGC N +S + L +G+ V+P D AD+ ++NTC E Sbjct: 5 QETAMNTVAITTLGCKINQFESAAMSEALGKDGFQVIPFDDVADIYVINTCTVTSRTDAE 64 Query: 63 SLEAIGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S I A +N +++VTGC + P V I G + + + + Sbjct: 65 SRRLIRRASRQNPSARIVVTGCYAQVAFEELSDMPGVNLILGNSEKKGIAALLKE-IGDG 123 Query: 121 KHNPFLSLVPEQGV------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + E+ A+L++ GC+ C++CI+P RG S P+ E Sbjct: 124 RQVLVSDISREKDAGGAQLESFAEHTRAFLQVQNGCDAFCSYCIVPYARGRSRSVPLDEA 183 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L+ + G KE+++ YG+ P+ + + + +L R Sbjct: 184 LAGIRTFAAQGFKEVVLTGIHLGGYGL--------DLTPPLTLLDILIAAEKQQLVERIR 235 Query: 235 LHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + V P D +I +A K + P+L IPLQ + ++L M R + + +++ Sbjct: 236 VGSVEPTEVSDALIAFLAGSKLVCPHLHIPLQSGNDQVLSRMNRKYAANLFREVVEKLVC 295 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++ + + I GFPGE+ E+F+ FL+ + F +SP G A + D V Sbjct: 296 ALPDICIGTDIITGFPGESAEEFEQGYRFLESLPVAYFHVFPFSPRTGTPAATMGDHVRS 355 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYL 412 V +ER +L ++ + +G+E+ V+I +E G + G S P V++ Sbjct: 356 SVIKERAKALRKLSEEKKKAYYRTFLGKELPVLIQNREENGMLKGLSRNYMP-----VFV 410 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ ++ + RV++ ++ G V Sbjct: 411 KGDDSLINNE-QRVRITGVVREEVKGEVV 438 >UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUN0_DESHD Length = 439 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 120/437 (27%), Positives = 203/437 (46%), Gaps = 28/437 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + FV+LGC N +SE + R GY VV S + AD+V+VNTC ++ +S + I Sbjct: 12 VCFVTLGCKVNQTESEALGQLFRNNGYHVVSSTEKADVVVVNTCTVTNTGGAKSRQTIRR 71 Query: 70 ALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL- 126 + + V+V GC V + G ++LE + + + + Sbjct: 72 MVKAHPDAFVVVMGCYAQTAPGEILGIAGVDLVLGTQDRGKILELIDQVKKEQQPKSSVR 131 Query: 127 ------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + ++ R A LKI EGCN CT+CIIP RG + SR ++EA++ Sbjct: 132 TIWDAKTFEELPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEK 191 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 LV AG KEI++ T +YG D+ + L + L+++ RL + Sbjct: 192 LVAAGYKEIVLTGIHTGSYGEDLGED----------WDLARLVKALAQIKGLHRLRLSSI 241 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P ++I ++ + P+L IPLQ S IL MKRP +V I++ + P Sbjct: 242 EPMEFTPELIDVIINYPAVCPHLHIPLQCGSDAILTRMKRPYTVKEFKELIQRLTSLQPG 301 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + + IVGFPGETE++FQ L+ ++ + F YS EG A P+Q+P ++KE Sbjct: 302 IAITTDVIVGFPGETEQNFQETLETVRSCGFSGIHVFPYSKREGTPAAKYPEQIPNKIKE 361 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER +++ ++ + ++ +G+ + V+I+ V EG + V+L Sbjct: 362 ERVKALLEVARESQEDYVRRFIGQRVEVLIERVSPEGVAAGHTGNY----IQVHLPPREG 417 Query: 418 --VKPGDILRVKVEHAD 432 + G+++ +E Sbjct: 418 KPWEGGELVECVLEKNH 434 >UniRef50_A4SAH0 Predicted protein n=3 Tax=Mamiellales RepID=A4SAH0_OSTLU Length = 579 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 108/487 (22%), Positives = 198/487 (40%), Gaps = 61/487 (12%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI-- 67 + + GC N+ DSE ++ L GYD +DAD++++NTC D A + + + Sbjct: 69 VYVETYGCQMNVNDSEVMMAVLEGAGYDETKEVNDADVILINTCAIRDKAEAKIWQRLAY 128 Query: 68 ------GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 G+ +E V V GC+ + ++++ E + GP +Y + + V P Sbjct: 129 FRSLGNGKKRSEKPVVGVLGCMAERIKEKLLEADRLADIVAGPDAYRDLPNLIDAVVGNP 188 Query: 121 K----------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + ++P V+ H A++ I GC++ C FCI+P RG SR Sbjct: 189 GGKAMNVQLSVEETYADIIP---VREAGSHSAFVTIMRGCDNACAFCIVPYTRGRERSRD 245 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTS----------------AYGVDVKHRTGFHNGEP 214 + ++ E + L + GVKE+ ++ Q+ + Y R Sbjct: 246 LASIMYEIRLLSEQGVKEVTLLGQNLANASTERLASASGSAFVGYADGFASRYDPERKRA 305 Query: 215 VKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRI 271 L ++++ + R+ + P+P DDV+ ++ + + L +P Q S Sbjct: 306 GTIQFAELLDKVASVDPEMRIRFTSPHPKDFPDDVLRVIRDRPNVSKCLHMPAQSGSSAT 365 Query: 272 LKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRV 331 L+ M R + + A I + + + P + + I GF GETE+D + + + ++ Sbjct: 366 LERMARGYTRESYFALIDRVKAMIPGCAITTDIISGFCGETEDDHEDTVSLMSAIGYEQA 425 Query: 332 GCFKYSPVEGADANALP-DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV 390 F YS EG D VPE+VK+ R + + +AE+ Q ++G V+++ Sbjct: 426 FMFAYSEREGTAGQRHQIDDVPEDVKQRRLQEVIDAFRARAAEKQQMEIGSTHCVLVEGP 485 Query: 391 DEEGAIGRSMADAPEIDGAVYLN-----------------GETNVKPGDILRVKVEHADE 433 ++ + + V G VKPGD + V+V Sbjct: 486 SKKNSDE--WTGKTDTSKWVVFEKNDAIGKYAGDEDAPTSGSYGVKPGDYVAVRVTGCST 543 Query: 434 YDLWGSR 440 L+G Sbjct: 544 GTLFGQV 550 >UniRef50_B2A5M5 RNA modification enzyme, MiaB family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5M5_NATTJ Length = 451 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 117/449 (26%), Positives = 206/449 (45%), Gaps = 15/449 (3%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD-ADMVIVNTCGFIDSA 59 M ++LGCP N +S+ + L GY + DD AD+ I+N+C +A Sbjct: 1 MIIGEKNKSFKIITLGCPLNQSESDLMRARLHQAGYSETGTGDDTADIYIINSCTVTQNA 60 Query: 60 VQESLEAIGEAL--NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY 116 ++S + +A N + V + GC G E ++I+E P++ I G + E+ +E + Sbjct: 61 ARKSRKEARKAKKGNPDAWVCLVGCYGEMEYEEIKEKIPEIDLIIGTRNREKAIEKL--V 118 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + N F + + + +KI EGC+ C++CI+ RG SR ++ Sbjct: 119 GQELDLNQFHNFPQDNNEIRPDKIRPAIKIQEGCDQSCSYCIVTLARGRPKSREFRQIKQ 178 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + K ++ G +EI++ + YG DVK ++ +VS L R+ Sbjct: 179 QVKSYLEEGYQEIILAGTNMGLYGKDVKGQSKHSYKFIDLPMLVSELATLPYDDYRIRIS 238 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P ++++ M E KI YL +PLQ S RILKLM R + D +++ + + Sbjct: 239 SLEPLEMTEELLYAMKEHDKICNYLYLPLQSGSDRILKLMNRKYTTDDFARIVEKAKTLL 298 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + + IVGFPGE EED + ++F++E +L ++ F YSP A + QV ++ Sbjct: 299 PGVGIMTDLIVGFPGEKEEDHKATMEFVEELKLSKLHVFPYSPRPKTLAASFNVQVRPDI 358 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLN 413 K R +L Q+++ QE + + V+ + E + +G + E V Sbjct: 359 KRARTEEMKELGQKLARRFYQENLNTRLRVLYERNYETSDKILGEGFS---ENYCLVRFE 415 Query: 414 GET---NVKPGDILRVKVEHADEYDLWGS 439 + K G+ + V ++ L GS Sbjct: 416 TKGTNLTNKKGEFVNVISHQNYDWGLMGS 444 >UniRef50_A9HM32 MiaB-like tRNA modifying enzyme n=12 Tax=Alphaproteobacteria RepID=A9HM32_GLUDA Length = 420 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 123/443 (27%), Positives = 197/443 (44%), Gaps = 32/443 (7%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 +T +P+ ++ GC N +SE + G+ D++IVNTC A +++ Sbjct: 1 MTAKPE--ILTFGCRLNTYESEVMR------GHAAALD----DVIIVNTCAVTAEAERQA 48 Query: 64 LEAIGEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQV----LEHVHHYV 117 +AI A +++VTGC + P V + G + + Sbjct: 49 RQAIRRAHRDRPGARIVVTGCAAQIDPDRWSALPGVTRVLGNREKLEAASWTPAAMQDGH 108 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 VP + R A++++ +GC+HRCTFCIIP RG S P+G V+ + Sbjct: 109 AVSDIMAATETVPHLVTEFAGRTRAFVEVQQGCDHRCTFCIIPFGRGPSRSVPVGAVVEQ 168 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + LV +G +EI++ D +++G D+ R ++V E+L RL Sbjct: 169 VRALVASGYREIVLTGVDITSWGGDLPGRPALGQLCRRVLALVPELERL-------RLSS 221 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 V P DD+ L+A EG+ +PYL + LQ S +LK MKR V+ + + R P Sbjct: 222 VDPVEIDDDLWRLLAQEGRFMPYLHLSLQAGSDMVLKRMKRRHLVEDVARVLDRARACRP 281 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +L + + I GFP ET+ F LDF++ RL + F YS G A +P VP V+ Sbjct: 282 DLGIGADVIAGFPTETDALFAETLDFVRAQRLPYLHVFPYSERPGTPAARMP-AVPVAVR 340 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 +ER + Q + + +GR + V+++ G S AP L+G T Sbjct: 341 KERAAQLRAAGQAAARDYHASLLGRTLNVLLETAT----TGHSEEFAPVRLAPDRLDG-T 395 Query: 417 NVKPGDILRVKVEHADEYDLWGS 439 + G I+ V+ DE L Sbjct: 396 AAEAGRIVTVRATAIDENGLVAE 418 >UniRef50_Q726F7 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Desulfovibrionales RepID=RIMO_DESVH Length = 430 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 151/444 (34%), Positives = 225/444 (50%), Gaps = 34/444 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + +SLGCPKN VD+E +L L V AD+V++NTCGFI AV+ES+ I E Sbjct: 4 VYSISLGCPKNRVDTEHLLGSLGVA-VQPVEHLSRADVVLINTCGFILPAVEESVRTIVE 62 Query: 70 ------ALNENGKVIVTGCLGAKE--DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 L + + V GCL + ++ P+V + H + Sbjct: 63 TIDDLSGLRKRPLLAVAGCLVGRYGAKELASELPEVDVWLPNQDITAWPAMLAHALK--- 119 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 V + T YA+LKIS+GC H C+FC IPS+RG S P + EA+ L Sbjct: 120 ---LEGAVTPGRLLSTGPSYAWLKISDGCRHNCSFCTIPSIRGGHRSTPADVLEREARDL 176 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVY 239 V GV+E+++++QD +A+G D+ G + +L E+L + RL Y+Y Sbjct: 177 VAQGVRELVLVAQDVTAWGEDIGAPHG----------LATLLERLLPVPGLARLRLMYLY 226 Query: 240 PYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P +++ M + ++PY D+PLQHA P IL M RP + D +++ R+ P+ Sbjct: 227 PAGLTRELLGFMRDAGAPLVPYFDVPLQHAHPDILSRMGRPFARDP-RRVVERVRDFFPD 285 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 LR++ IVGFPGET+E + L F++E R +G F Y EG A +P+QV + VKE Sbjct: 286 AALRTSLIVGFPGETDEHYAALTSFVEETRFTHMGVFAYRAEEGTPAAEMPEQVEDRVKE 345 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYLNG 414 R + M++Q +IS E L G V++D EE GR+ APEIDG Y++G Sbjct: 346 WRRDALMEVQAEISEELLAVHEGTRQQVLVDAPHEEWPGLHTGRTWFQAPEIDGITYVSG 405 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 V+PG ++ + YDL Sbjct: 406 P-GVEPGALVEADIVETRTYDLVA 428 >UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=Parachlamydiaceae RepID=Q6MAB2_PARUW Length = 434 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 112/437 (25%), Positives = 194/437 (44%), Gaps = 20/437 (4%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 K ++LGC N +S+ +L GY + AD+ IVNTC +SA S Sbjct: 3 NETNKFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESADSSSR 62 Query: 65 EAIGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 AI + EN +++V GC ++ ++ + V + EQ+L + Sbjct: 63 HAIRQLARENQGTQLLVAGCFAERQPEVIQKIDGVTHVIPNREKEQLLARLF-------- 114 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 P +L + A++K+ +GCN CT+CIIP +RG SR + EVL EAK L+ Sbjct: 115 -PKENLPEFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSRSVEEVLEEAKALI 173 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 G KEI++ + D + + +V + +QL L RL + P Sbjct: 174 SNGYKEIVLTGINIG----DFDGKVAKGETPVRLSELVRMVDQLPGLE-RLRLSSIDPDE 228 Query: 243 HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++ + GK + I LQ S ILK M R + L I + + + T Sbjct: 229 VDDELSDAILNGKHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAHSDFTFT 288 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + IVGFPGET+ DFQ ++ +K + +V F YS +N +P++V E+ R Sbjct: 289 TDIIVGFPGETDLDFQDTIEVMKHVKFAKVHMFPYSDRPRTRSNLMPNKVSPEMIRMRKQ 348 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 +++ +Q + + + + R + ++ + +DE + E +V++ + ++ Sbjct: 349 EILRVAEQTAYKLREGYLNRRMKILTESIDEARP--GEIHGHTENFLSVWIQ-DEGIQSN 405 Query: 422 DILRVKVEHADEYDLWG 438 I+ V++ L G Sbjct: 406 KIVEVELVANTPAGLIG 422 >UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY00_ACIFD Length = 487 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 126/471 (26%), Positives = 200/471 (42%), Gaps = 43/471 (9%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL---EAIG 68 + GC N DSERI L G DA +V+ NTC +A + + Sbjct: 7 VRTFGCQMNEHDSERIAGVLEGLGLTRGDDPADASVVVFNTCTIRANADERFFGQVNQLR 66 Query: 69 EALNENG--KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHY--------- 116 EA N +++V GCL E + E P V I G H ++ E + Sbjct: 67 EARRRNPSMRIVVAGCLAQGEGAGLLERAPHVDVIVGTHQVGRLAELLGAADGAEAVVDV 126 Query: 117 -VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 P+P P A++ I GC++RC FCI+P +RG SRP ++ Sbjct: 127 REPEPGSVGLDDPTPWGEAVSEEPWRAWVTIQVGCDNRCAFCIVPRVRGPEASRPFDAIV 186 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEP--------------------V 215 +E + L GV E+ ++ Q+ ++YG D+ E V Sbjct: 187 AEVRELAARGVSEVTLLGQNVNSYGRDLVLAMRRAEDERERAQVASRSGVAFLGQGVPRV 246 Query: 216 KTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRIL 272 + L + + R+ + P+P + MAE + L PLQ S RIL Sbjct: 247 RPLFADLVRAVGAVPGIRRVRFTSPHPKDMRTETFQAMAETPTVCESLHFPLQSGSDRIL 306 Query: 273 KLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVG 332 M R S DR LA++ + R +L + + IVGFPGET+ DF+ L+ EA D Sbjct: 307 AAMHRGYSADRFLAKLAEARATIDDLAVSTDIIVGFPGETDADFEATLEVAAEAAFDLAY 366 Query: 333 CFKYSPVEGADANALPDQ-VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD 391 F YSP G +A AL D+ V +V ER++R +++ ++ +A + +VGR+ ++I+ Sbjct: 367 TFIYSPRPGTEAAALVDRFVDPDVVHERFDRLVRVTERSAAAAHRARVGRDEEILIEGPS 426 Query: 392 EEGAIGRSMADAPEIDGAVYLNG-ETNVKPGDILRVKVEHADEYDLWGSRV 441 + R+ V++ G + G R ++ A + L G + Sbjct: 427 RKDP--RTATARTRQHKLVHIPGLDARALGGRYGRARIVDARAHYLIGEII 475 >UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=534 Tax=Proteobacteria RepID=MIAB_PSYCK Length = 497 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 119/466 (25%), Positives = 209/466 (44%), Gaps = 46/466 (9%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 K+ + GC N+ DS ++L L + G +V + D+AD++++NTC + A ++ Sbjct: 42 ATKKVFVTTQGCQMNVYDSGKMLDVLGDSHGMEVTHNIDEADVLLMNTCSIREKAQEKVF 101 Query: 65 EAIGEA-----LNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVH---- 114 +G + + V GC+ + D I++ P V + GP + ++ E Sbjct: 102 SELGRWRKLKEKRPDLVIGVGGCVASQEGDNIQKRAPYVDMVFGPQTLHRLPELYDQSHQ 161 Query: 115 --HYVPKPKHNPFLSLVPE-QGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDL 166 PK + P + P A++ I EGC+ C+FC++P RG+ Sbjct: 162 QREIAPKNRIGTVDVSFPSIEKFDFLPEPRVEGFKAFVSIMEGCSKYCSFCVVPYTRGEE 221 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 +SRP+ +VL+E L GV+EI ++ Q+ + Y + L + Sbjct: 222 LSRPLDDVLAEIDSLAAQGVREINLLGQNVNGY--------RGEKDDGSICRFAELLHYV 273 Query: 227 SKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 S + R+ Y +P DD+I A+ +++ +L +P+Q S IL MKR ++D Sbjct: 274 SHVDGVERIRYTTSHPLEFTDDIIDAYAQLPELVSHLHLPVQSGSNAILAAMKRNHTIDV 333 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 + +I + + I P++ L S FI+GFPGET++DFQ L+ KE D F YS G Sbjct: 334 YINQINKLKAIRPDIHLSSDFIIGFPGETDQDFQDTLNLAKELNFDHSYSFIYSKRPGTP 393 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIG------ 397 A LPD V + K+ER F ++ + + E VG V++++V Sbjct: 394 AAELPDDVSFKTKKERLAEFQKVIIDSTLAKTHEMVGTTTRVLVEQVANRHPDCLIGTAD 453 Query: 398 --RSMADAPEIDGAVYLNGETNVKPGDILRVKVEH-ADEYDLWGSR 440 R++ ++D + G I+ V++ + + G Sbjct: 454 NTRTVMFPYDVDKM-------DEMLGKIVSVRITDFVSPHMVKGEI 492 >UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Cystobacterineae RepID=MIAB_ANASK Length = 464 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 115/453 (25%), Positives = 202/453 (44%), Gaps = 36/453 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ + GC N DS+R++ L Y S D+AD++++NTC + A Q+ L A+ Sbjct: 27 RKVYVHTFGCQMNESDSDRMVELLGRHAYARAASADEADLILLNTCAVREKAEQKLLSAL 86 Query: 68 GE----ALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP-- 120 G + V+GC+ +E D++ P V + GP + ++ E V + Sbjct: 87 GRYREVKARRGALIAVSGCVAQQEKDRLLARVPYVDFVFGPDNIGRLPEMVERARDERFA 146 Query: 121 ----KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + R A++ +GC++ C FCI+P RG VSRP +V++ Sbjct: 147 ETGWMDSEEYVFPRADPEAARGRVTAFVTAMKGCDNVCAFCIVPHTRGREVSRPFPDVVA 206 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E L GV+E+ +I Q+ ++Y + L +++ + R+ Sbjct: 207 ECAALAGVGVREVTLIGQNVNSY--------------TGGCTFADLLRRVAAVPGIDRIR 252 Query: 237 YV--YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + +P+ D ++ + E K++P+ +P+Q S +L+ M+R SV L R + R Sbjct: 253 FTTSHPHDLSDALVEVFRDEPKVMPHFHLPVQSGSDAVLRRMRRDYSVAEYLDRFDRLRA 312 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD---- 349 P + + + FIVGFPGET+ DF+ L L+ AR ++ F +SP A Sbjct: 313 ARPGIAITTDFIVGFPGETDADFEASLALLERARFEQSFSFVFSPRPHTVAAVRLGSAPE 372 Query: 350 --QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 VP E R R + Q++I+ E L ++G+ + V+++ +E G + PE Sbjct: 373 WRDVPREAAVARLERLLAAQRRIAGEILAGELGKVVEVLVEGPSDEP--GERLGRTPENR 430 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 E G + V++ A L G+ Sbjct: 431 VVHLAADEAAAPAGARVAVRITRAGGSSLSGTL 463 >UniRef50_Q29AM2 GA19527 n=9 Tax=Bilateria RepID=Q29AM2_DROPS Length = 589 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 114/473 (24%), Positives = 208/473 (43%), Gaps = 41/473 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F GC N D+E + + L+ GY+ +DAD+V++ TC + A Q+ + Sbjct: 98 RKVHFEVYGCQMNTNDTEVVWSILKQHGYERCQELEDADLVMLVTCAVREGAEQKIWNRL 157 Query: 68 GEAL----NENGK-----VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLE--HVHH 115 K + + GC+ + + + + V I GP SY+ + V Sbjct: 158 RHLRAMKQKRGAKRQPLQLTLLGCMAERLKERLLDQEQCVDVIAGPDSYKDLPRLLAVSR 217 Query: 116 YVPKPKHNPFLSLVPEQGVKL-----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LSL + + A++ I GC++ CT+CI+P RG SRP Sbjct: 218 HYGNSAINVLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRP 277 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYG-------VDVKHRTGFHNGEPVKTS---MV 220 + +++E + L GVKE+ ++ Q+ ++Y D GF KT Sbjct: 278 LASIVNEVRALQVQGVKEVTLLGQNVNSYRDKGAGQTSDTSLVPGFKTVYKPKTGGIPFS 337 Query: 221 SLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKR 277 L + +++ R+ + P+P D+V+ ++ + + L +P Q + +L M+R Sbjct: 338 ELLQSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTEVLARMRR 397 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 + + L ++ REI P + L S FI GF GETE +F+ + + + + F YS Sbjct: 398 GYTREAYLELVEHIREILPTVGLSSDFICGFCGETEAEFEDTISLINTVQYNVAYLFAYS 457 Query: 338 PVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--- 393 E A+ D VP VK R R +Q + + + + G++ L++I+ + Sbjct: 458 MREKTTAHRRYVDDVPVAVKTARLQRMVQAFRDGATQLHKNFEGKQQLILIEGKSKRSDA 517 Query: 394 GAIGRSMADAPEIDGAVYLNGETN-------VKPGDILRVKVEHADEYDLWGS 439 GR+ A+ I A+ L +T + GD + +++ ++ L G+ Sbjct: 518 HWFGRNDANIKVIVPAMDLPTDTGDAARRRSIAVGDFVVAQIDESNSQVLKGT 570 >UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=51 Tax=Epsilonproteobacteria RepID=MIAB_HELAH Length = 439 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 112/435 (25%), Positives = 211/435 (48%), Gaps = 25/435 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ ++GC N DSE +L+EL Y AD++++NTC + ++ IG Sbjct: 3 KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKIADLILINTCSVREKPERKLFSEIG 62 Query: 69 ---EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + N K+ V GC + I + P V + G + ++ + +H Sbjct: 63 QFAKIKKPNAKIGVCGCTASHMGADILKKSPSVSFVLGARNVSKISQVIHKEKAVEVAID 122 Query: 125 FL-SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 + S + + + L IS GC+ +CT+CI+P RG +S P+ +L EA++L + Sbjct: 123 YDESSYAFEFFEKKAEVRSLLNISIGCDKKCTYCIVPHTRGKEISIPMDLILKEAEKLAN 182 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP- 242 G KE++++ Q+ + YGV E K + L ++LS++ R+ + P+P Sbjct: 183 NGTKELMLLGQNVNNYGVRFSS-------EHAKVNFSDLLDKLSEIPGIERIRFTSPHPL 235 Query: 243 -HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 D+ + A K+ + +PLQ S +LK+M+R + + L R+++ + + PE+ + Sbjct: 236 HMNDEFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYNKEWFLNRVEKLKALVPEVGI 295 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + IVGFP E+++DF+ ++ L++ D + F YSP +A A ++VP EV R Sbjct: 296 STDIIVGFPNESDKDFEDTMEVLEKVCFDTLYSFIYSPRPFTEAGAWKERVPLEVSSLRL 355 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDE-----EGAIGRSMADAPEIDGAVYLNGE 415 R ++I E+ + +VG+ +V+++ E G GRS + + + + Sbjct: 356 ERLQNRHKEILEEKARLEVGKTHVVLVENRHEVDGQIVGFEGRS-----DTGKFIEVTCK 410 Query: 416 TNVKPGDILRVKVEH 430 PG+++ V++ Sbjct: 411 EKRNPGELVEVEIIS 425 >UniRef50_C6X0V6 MiaB family protein, possibly involved in tRNA or rRNA modification n=70 Tax=cellular organisms RepID=C6X0V6_FLAB3 Length = 454 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 107/402 (26%), Positives = 178/402 (44%), Gaps = 14/402 (3%) Query: 5 TPQPK-IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 T QPK + +LGC N ++ I +L GY V D AD+ ++NTC ++A +E Sbjct: 8 TLQPKTAAYHTLGCKLNFSETSTIARQLTGAGYQKVGFDDKADVYVINTCSVTENADREC 67 Query: 64 LEAIGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + A N +G V++ GC + + V + G +L ++ Sbjct: 68 KYHVKRAMKANPDGLVVILGCYAQLKPEEISAIEGVDLVLGAKEKFNILSYLGDLQKTAN 127 Query: 122 HNPFLSLVPEQ------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 H S ++ + R A+LK+ +GC+++CT+C IP RG S I V+ Sbjct: 128 HGLIHSCEIDETDFFIGSYSIGDRTRAFLKVQDGCDYKCTYCTIPLARGISRSDTIENVV 187 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 A + G+KEI++ + YG K G E ++S + + + R+ Sbjct: 188 QNAAEIAAKGIKEIVLTGVNIGDYG---KGEFGNKKHEHTFLDLISELDLVEGIE-RIRI 243 Query: 236 HYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P D+ I L+A K +P+ IPLQ S +LK MKR RI + R + Sbjct: 244 SSIEPNLLKDESIELVARSKRFVPHFHIPLQSGSDDLLKKMKRRYLTALYSERINKIRSV 303 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P+ + I+GFPGETEE F FL + + + F YS E +A A+ VP Sbjct: 304 VPDACIGVDVIIGFPGETEEKFLETYRFLSDLPISYLHVFTYSERENTEAAAMDGAVPVP 363 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 ++ R L ++ Q + G+ + V+ + ++ G + Sbjct: 364 ERKRRNKMLRILSEKKKMAFYQSQTGKTLPVLWEHENKNGLM 405 >UniRef50_D0J9M2 RNA modification protein n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0J9M2_BLASP Length = 466 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 112/456 (24%), Positives = 205/456 (44%), Gaps = 35/456 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV---QESLEA 66 S GC N+ D+E I++ L G+ + + A ++++NTC A + LE Sbjct: 15 YYIESYGCQMNISDTEIIISILSKNGFLLTNNLKKAHIILLNTCAIRKKAELSIKNRLEN 74 Query: 67 IGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY---------- 116 + + N K+ + G LG + + + GP+SY ++ + + Sbjct: 75 LRYLKSNNQKIPLFGILGCLSKSEKYSNL-IDFSIGPNSYRKIPDIIRLVMMNDEKKIKP 133 Query: 117 --VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + ++ + ++ P +K + +L I+ GC++ CTFCI+P RG S + Sbjct: 134 ILLSENQNETYENISPSPSIK---KITTFLSITRGCDNMCTFCIVPFTRGRERSSSPYSI 190 Query: 175 LSEAKRLVDAGVKEILVISQDTSAY---GVDVKHRTGFHNGEPVKTSMVSLCEQL-SKLG 230 + E + L + G KE+ ++ Q+ +Y G +K + N L + L SK+ Sbjct: 191 IKECENLYEKGYKEVTLLGQNVDSYLWFGGGLKKQIKIDNNNEKIIDFSRLLDLLASKIP 250 Query: 231 -IWTRLHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 + R P+ D VI ++ I ++ +P+Q S +ILKLM R + ++ L+ I Sbjct: 251 FMRIRFSTSNPHDMSDRVIEVISKHSNICKHIHLPVQSGSNKILKLMNRKYTREKYLSLI 310 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-AL 347 ++ R I PE ++ I GF E EED + + + + D F YSP G A L Sbjct: 311 QKIRSIIPECSISHDIITGFCNEEEEDHLETISLMNKVKYDYGYMFSYSPRAGTYAYKKL 370 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAP 404 D VPE +K++R + LQ+ S R+++ +G V+I+ ++ GR+ + Sbjct: 371 KDNVPENIKKKRLKEIIDLQRIHSIFRMKKYLGTIQEVLIEGKSKKNNQDWYGRNTQN-- 428 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + + K G+ + VK+ + L G Sbjct: 429 ----IVVVFPKKLSKIGETVFVKITNCTSATLIGRI 460 >UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Chloroflexi (class) RepID=MIAB_ROSS1 Length = 476 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 118/451 (26%), Positives = 210/451 (46%), Gaps = 36/451 (7%) Query: 3 KVTPQPKIGFV-SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 TP+ + +V ++GC N+ DSER+ L+ GY +DA +++N+C SA + Sbjct: 20 DATPRERRYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEE 79 Query: 62 ESLEAI-----GEALNENGKVIVTGCLGAKEDQ--IREVHPKVLEITGPHSYEQVLEHVH 114 L + + + + KV++ GC+ +Q + P V P + ++VL Sbjct: 80 RILGKLSEVQRLKRKHPDTKVVLWGCMVGPGNQSIFQSRLPMVDHFVSPSAVDEVLA--- 136 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 P P + +P P ++ I GCN C+FC+IP RG SRP+ E+ Sbjct: 137 -LAPNPIYQLEEPALPVARWDHPPVSV-HVPIQYGCNMSCSFCVIPLRRGRERSRPLDEI 194 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E +R+V G KEI ++ Q ++G D+ P + + L + + R Sbjct: 195 VEECRRIVARGAKEITLLGQIVDSWGHDL----------PGRPDLADLLRAVHDIPGLLR 244 Query: 235 LHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 L ++ +P D +I +AE + +P +++P+Q +LK+M+R +V R I + Sbjct: 245 LRFLTSHPAWMTDRLIAAVAELPRCMPDINLPVQAGDDALLKIMRRGYTVQRYRDLIAKI 304 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ- 350 R+ P+++L + IVG PGET E F+ L++ R D+V +S G A + Sbjct: 305 RDAIPDVSLTTDVIVGHPGETRERFEGTKRLLEDIRFDKVHIAAFSSRPGTRAADMELDP 364 Query: 351 ---VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 VPE K+ R +LQ+QI+AER + + + V+++ + GR+ + Sbjct: 365 TLAVPEGEKQLRRIELERLQEQIAAERNARFLHQTVEVLVEGEHKGKWRGRTPGNK---- 420 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 + + + G + RV + H + L G Sbjct: 421 --LVFFSDPDDWTGRLARVIITHTGPWSLQG 449 >UniRef50_Q1PXT1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXT1_9BACT Length = 447 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 105/453 (23%), Positives = 189/453 (41%), Gaps = 32/453 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 F++ GC N +++ + L +G+ + AD+ ++NTC ++ ++S Sbjct: 6 SKTCAFITFGCKVNQYETQALRESLIAKGFMEISPEMAADVYVINTCTVTSASDEKSRNY 65 Query: 67 IGEALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHH--------- 115 I ++ K ++VTGC + + V + + E + Sbjct: 66 IKRLKKKSPKSSIVVTGCYAESDAAAIKKIDGVSHVITKADESSLAEIIVGNDDPCIPQI 125 Query: 116 -----YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 Y+ + S+ + A+LKI +GC+ C++CIIP +RG + SR Sbjct: 126 TSLPPYLLQNNTFQKDSIYRLNISRFHGHTRAFLKIEDGCDMYCSYCIIPYVRGAIKSRK 185 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 ++ EAKRL+ G KEI++ AYG ++ S+V + E+LS+ Sbjct: 186 WQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSD----------GISLVKILERLSEFS 235 Query: 231 I--WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL + +++ L+AE K I P+L IPLQ ILK M R + Sbjct: 236 GLGRIRLSSIEVNEITPELMHLIAERKTICPHLHIPLQSGDDLILKRMNRKYTAAYYQEI 295 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + R + + +VGFPGETE FQ +DF +A R+ F +S +G A ++ Sbjct: 296 LDTIRSNIKLPAITTDVMVGFPGETERHFQNTVDFCTKAGYSRMHIFPFSIRKGTPAASM 355 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 + +R + +S ++ + V+++ E A + E Sbjct: 356 QNHCASPSITQRKDLLKAHADTLSYAYKKQFLNHIGEVLVEW--ERDAKTNKLCGYTERY 413 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V +G +K I+ V++E + D++G Sbjct: 414 IKVLFDGPDTLK-NSIVPVQIERIERSDVFGKL 445 >UniRef50_B8DM03 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DM03_DESVM Length = 461 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 159/456 (34%), Positives = 240/456 (52%), Gaps = 31/456 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + VSLGCPKN VD+ER+L L V +AD+V+VNTCGFI AV+ES+ + E Sbjct: 4 VYSVSLGCPKNRVDTERLLGALGAP-VRPVARMAEADVVLVNTCGFILPAVEESVRTVVE 62 Query: 70 ALNE------NGKVIVTGCLGAKEDQ--IREVHPKVLEITGPHSYEQVLEHVHHYVPK-- 119 A++E + V GCL + + + P+V S E + + V Sbjct: 63 AVDEISGLARRPLLAVAGCLVGRYGERDLAAELPEVDLWLPNQSIETWPDLLARAVGARV 122 Query: 120 ------------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + T YA+LKIS+GC H C+FC IPS+RG Sbjct: 123 AMGGGLAGSGTLAPGAVAPGYAGGTRLLSTGPSYAWLKISDGCRHNCSFCTIPSIRGAHR 182 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 S P E+ EA++L+D GV+E+++++QD +A+G D+++ G G+ ++ L Sbjct: 183 STPAAELEREARQLLDMGVRELILVAQDVTAWGGDLENGPGGSAGKGDLRPLLDRLLPLP 242 Query: 228 KLGIWTRLHYVYPYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 L RL Y+YP DD++ +A +PY D+PLQHA P +L M RP + + ++ Sbjct: 243 GLD-RLRLMYLYPAGLNDDLLAYLAAAGAPFVPYFDVPLQHAHPDVLGRMGRPFARNPRV 301 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 + + R+ P+ LR++ IVGFPGETEE + L DF+ E R +G F Y EG A Sbjct: 302 -VVDRIRKHFPDAALRTSIIVGFPGETEEHYAALTDFVAETRFHHLGVFAYRAEEGTPAA 360 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMAD 402 A+P QV ++VKE R + M++Q +IS E ++ VG+ + V++D +E GR+ Sbjct: 361 AMPGQVDDKVKEWRRDALMEVQAEISEEIMESCVGQRLPVLVDAPHDEWPGLHTGRTWFQ 420 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 APEIDG Y++G V PG ++ + A YDL Sbjct: 421 APEIDGVTYVSG-AGVIPGALVEADIVEARTYDLVA 455 >UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Treponema denticola RepID=RIMO_TREDE Length = 467 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 146/463 (31%), Positives = 233/463 (50%), Gaps = 37/463 (7%) Query: 16 GCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL--NE 73 GC KN VD+E I+ + + D+AD++IVN+CGFI+SA +ES+ A+ +A + Sbjct: 5 GCAKNQVDAELIIGIMENLSWKNTSDPDEADLIIVNSCGFINSAKEESINAVLQAKAAHP 64 Query: 74 NGKVIVTGCLGAKEDQIRE-VHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS----L 128 KV++ GCL + I + P+ I G + + + + PK + + Sbjct: 65 KAKVLLAGCLAERYADILKNDLPEADGIFGNGNLSLLPQLIDSMFPKKTSDEKFIEKTLV 124 Query: 129 VPEQGVKLTPRH-------YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 P+ G+ R Y+KI+EGC++ C+FC IP +RG L SRPI ++ E K Sbjct: 125 PPQIGICGGERPKILNFPRSTYIKITEGCDNFCSFCAIPIIRGRLRSRPIKDICDEIKTF 184 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVY 239 + E +I QD +AY + + + L + +SK+ RL Y++ Sbjct: 185 LKKSFYEFNLIGQDLAAYQTGKDDLSEDELHRENCSGLALLLKSISKIKGNFKIRLLYIH 244 Query: 240 PYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC--- 295 P D++P+M A+ + LPY DIP Q + +I++ M R G+ + L IK RE Sbjct: 245 PDHFPLDILPIMTADKRFLPYFDIPFQSGAQKIIRAMNRNGAAEVYLDIIKNIREAFEKT 304 Query: 296 ----PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 E +R+TF+VGFPGET+EDF + FLKE R G F YS E + + +V Sbjct: 305 NSPYGEPQIRTTFLVGFPGETDEDFNETIKFLKELRPLWSGGFTYSREEDTPSYSFKGKV 364 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-----AIGRSMADAPEI 406 P++ E R Q I+ ++L +G+EI V+++E+ + A+GR+ APE+ Sbjct: 365 PKKTAEARLAEIQNAQTSITEKKLDSFIGKEIEVLVEELIQAEDKTFLALGRAWFQAPEV 424 Query: 407 DGAVYLNGETN--------VKPGDILRVKVEHADEYDLWGSRV 441 DGAV LN N + PG I++ ++ + +DL V Sbjct: 425 DGAVVLNFNLNKKDIDGNPIAPGSIVKARIAARNGFDLEAVAV 467 >UniRef50_Q7VGP6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Campylobacterales RepID=MIAB_HELHP Length = 462 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 115/444 (25%), Positives = 204/444 (45%), Gaps = 19/444 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELR-TEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ +LGC N DS ++ ELR + Y + AD++++NTC + ++ Sbjct: 1 MKLFIQTLGCAMNERDSAHMIAELRDKKHYTLTNDIKQADLILINTCSVREKPEKKLFSE 60 Query: 67 IG---EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 IG + K+ V GC + ++I + P V + G + ++ + + Sbjct: 61 IGAFAKEKKAGAKIGVCGCTASHLGEEIIKKAPSVDFVLGARNVSKITQVLERPKAVEVD 120 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + A+L IS GC+ +C++CI+P RG +S P ++SEAK+ V Sbjct: 121 IDYDDSTYVFASSQGMGIKAHLNISIGCDKKCSYCIVPFTRGKEISVPKDLLISEAKKCV 180 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 +G KE+L++ Q+ + YGV H KT+ L LS++ R+ + P+P Sbjct: 181 ASGAKELLLLGQNVNNYGVRFSHSHP-------KTNFTQLLRALSEIDGLYRIRFTSPHP 233 Query: 243 --HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D+ + A I + IPLQ S +ILK+M+R L RI + + + P + Sbjct: 234 LHMDDEFLEEFASNPVIAKGIHIPLQSGSSQILKMMRRGYDKQWYLNRIAKLKSLVPNVG 293 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ--VPEEVKE 357 + + IVGFP E+E+DF+ ++ L D + F YSP A V EV + Sbjct: 294 IGTDIIVGFPTESEQDFEDTMEVLSLVEFDTLYSFVYSPRPHTSAFEYDKSMLVSPEVAK 353 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER R L ++I +++ Q ++GR V+I+ + G+ ++ + + Sbjct: 354 ERLARLQNLHKEILSKKAQLEIGRIHNVLIE--NHYNGEGQCWSEGRSSSNKLIKILDKK 411 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 + G I++V++ H + L G + Sbjct: 412 CEIGSIVKVEITHNEGGGLMGRFI 435 >UniRef50_D0LST9 RNA modification enzyme, MiaB family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LST9_HALO1 Length = 521 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 200/475 (42%), Gaps = 60/475 (12%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P++ + GC N+ DS+ + L GY S D AD++++NTC + A + L Sbjct: 44 PRVYLETYGCQMNVADSDMLTGILLDAGYRRAASADAADVILINTCAVRERAEDKVLARA 103 Query: 68 GEA-----LNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHY----- 116 + + + + GC+ +D + E P V + GP SY ++ E + Sbjct: 104 RQLSALKRQRPDMVLGIAGCMAEHLKDSLLEQAPYVDIVAGPDSYRRMGELLARARDLAA 163 Query: 117 ----------VPKPKHNPFL-------------SLVPEQGVKLTPRHYAYLKISEGCNHR 153 P+P P + + G ++ I GC+ Sbjct: 164 PAAGERADSDAPRPVRAPGVGAQVVDVQLDKGETYEGLSGALGGDGISGFVTIQRGCDKF 223 Query: 154 CTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE 213 CTFC++P RG E+L + + V+AG +E++++ Q ++Y Sbjct: 224 CTFCVVPFTRGRERGSAPREILRQVRAYVEAGYREVVLLGQTVNSY-------------R 270 Query: 214 PVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPR 270 L ++++ R+ + PYP +VI +A E K+ Y+ +PLQ S Sbjct: 271 YEDVGFAELLRAVARVDGLERIRFTSPYPVDFTAEVIDAIASEDKVCKYVHLPLQSGSDE 330 Query: 271 ILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDR 330 +L M+R +VD A + R P++ + + + F GETE D Q L ++E R D Sbjct: 331 VLARMRRGYTVDDFRAIVAALRARMPDIAISTDILSSFSGETEADHQATLALMRELRFDS 390 Query: 331 VGCFKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 F+YS A LPD V E K+ R + LQ++ISAE ++G+ V++ Sbjct: 391 AFMFRYSERSLTYAAKKLPDDVSEADKKRRLAEIIALQERISAEVFAAQIGKRERVLLHN 450 Query: 390 VDEE---GAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + +GR+ +V + + GDI+ V++E A L+G + Sbjct: 451 RSKRSDQQLVGRTDG-----FKSVIVPA-AGLAIGDIVEVEIERATMATLFGRPI 499 >UniRef50_A0LEL6 RNA modification enzyme, MiaB family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEL6_SYNFM Length = 440 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 184/446 (41%), Gaps = 28/446 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE--SL 64 K+ +LGC N +S ++ L + V AD+ +V++C SA + L Sbjct: 3 SKKVAVETLGCKVNQYESSVMMESLMQANWQPVSFKGAADLYVVHSCAVTSSAAFQTRQL 62 Query: 65 EAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGP---HSYEQVLEHVHHYVPKPK 121 LN + V GC + I G + +E + + Sbjct: 63 LRRARRLNPGALIAVVGCDAQLDHDRLAAGELATHILGTAEKFDIARWIEVPASFAAPCR 122 Query: 122 HNPFLSLVPEQGVKL-----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 ++ +P + T R AYLK+ +GCN C++C++P RG S P EVLS Sbjct: 123 AVKGVNDIPRLSAQAVSCMHTGRTRAYLKVQDGCNAYCSYCVVPYTRGRSRSLPADEVLS 182 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTR 234 +R V+ G +E+++ +G D+ + L +++ R Sbjct: 183 RLRRFVEVGYREVILTGIHLGQWGKDLTPT----------RDLAGLLDRIGDSDSPPRVR 232 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + P ++ ++ I P+ IPLQ +L M RP + + I++ R Sbjct: 233 LSSLEPLEWSAGLLRRISTVPWICPHFHIPLQSGDDDVLAAMHRPYTALQYANLIRELRM 292 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + PE L + +VGFPGET+ F L ++E L + F +SP G A +P ++P Sbjct: 293 LFPEAALGADVMVGFPGETQRRFLNTLHLVEELPLTYLHVFPFSPRPGTPAADMPGRIPG 352 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-GAIGRSMADAPEIDGAVYL 412 + ++R + + + + +GR + V+++ G + + A+ + V Sbjct: 353 DETKKRARLLQDIGTRKRRQFSERFLGRSVEVLVESAAPRAGWLRGTTANYLQ----VLF 408 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 V PG I+RV+V + + +L Sbjct: 409 PAGPPVLPGSIVRVQVVRSGDRELIA 434 >UniRef50_Q0AWM7 MiaB-like tRNA modifying enzyme n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWM7_SYNWW Length = 456 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 106/403 (26%), Positives = 185/403 (45%), Gaps = 21/403 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F +LGC N V++E++ + GY +V + AD+ IVNTC S+ ++S Sbjct: 1 MKKVAFHTLGCKVNQVETEQLKEKFIQRGYQLVDFNESADLYIVNTCTVTHSSDRKSRAM 60 Query: 67 IGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + A N V+ TGCL + P + I G E +LE + V + Sbjct: 61 LRRAARRNPGAMVVATGCLAQVDAAQLAAIPGLNLIVGSQQKEAILELIEGQVSSRSESE 120 Query: 125 FL----------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 L L P K R A++KI +GC C++CI+P RG S+ +V Sbjct: 121 PLIVCPPLVAGKKLPPVIYSKRHERSRAFVKIQDGCQSYCSYCIVPFARGPSRSKLPEDV 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 +E ++LVD G EI++ T YG D++ + ++ L + R Sbjct: 181 AAELQQLVDLGYHEIVLTGIHTGLYGNDLED--------WNLSRLLRLLFARVEGNYRIR 232 Query: 235 LHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + P ++++ + A G ++ + IPLQ S RIL+ M R + ++ + Sbjct: 233 LSSLEPVEIDEELLEMAAGGERLCRHFHIPLQSGSSRILRAMNRRYDREFYYKLVQHIVQ 292 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + + +VGFPGE ++D+Q L L++ + + FKYS G A + QV + Sbjct: 293 RVKGAAVTADVMVGFPGEEKKDYQDTLALLQDLPVLDLHVFKYSKRPGTAAAKMEPQVSD 352 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI 396 KE R +QL + + +++G+E+ V+++++ E + Sbjct: 353 REKEMRSAELIQLAEAKKRSFINQQLGQELEVLVEQIVGEDSF 395 >UniRef50_O66772 Putative methylthiotransferase aq_474 n=3 Tax=Aquificaceae RepID=Y474_AQUAE Length = 410 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 114/433 (26%), Positives = 200/433 (46%), Gaps = 35/433 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F +LGC N D++ + + +GY+VV D AD+ ++NTC + S +AI Sbjct: 1 MKVAFETLGCRMNQFDTDLLKNKFIQKGYEVVSFEDMADVYVINTCTVTVGGDRSSRQAI 60 Query: 68 GEALNENGKVIV--TGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 +A N K IV TGC Q +V + G ++L+ + Y+ + + Sbjct: 61 YQAKRRNPKAIVVATGCYAQVNPQELAKLKEVDLVVGNTHKSELLKILEEYLERREKKVV 120 Query: 126 L-SLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + E+ V+ +LK+ EGCN CTFC+IP RG + S + +++ + Sbjct: 121 VGEIFREKEVRNFDTVLYFEGVRPFLKVQEGCNKFCTFCVIPYARGKVRSVDLEKIVHQV 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TRLH 236 K L G KE+++ S YG D + ++ +L +L K+ RL Sbjct: 181 KLLAQKGFKEVVLTGTQLSQYGWDKGY------------NLYTLLTELIKIEGIELIRLS 228 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 ++ +++ L+ +E KI P+ + LQ S RIL+LM R + + + E Sbjct: 229 SMHIKEMDKELLKLIVSEEKIAPHFHLSLQSGSNRILELMDRGYTREEYEEVVNFIVENR 288 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P ++ + IVGFP E+EEDFQ +FLK + + F YS A+ L ++PE + Sbjct: 289 PISSIGTDVIVGFPTESEEDFQETYEFLKRIPISYMHIFPYSDRPFTKASKLKPKLPERI 348 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +L Q+ E ++ G+E+ ++ E + + + + E Sbjct: 349 KKERVRILKELDQKKRQEFYEKNKGKELRALVIEE-----------NRLLTENYIDIKRE 397 Query: 416 TNVKPGDILRVKV 428 + G ++RV + Sbjct: 398 GYKEVGKLVRVLI 410 >UniRef50_D1AKP3 MiaB-like tRNA modifying enzyme n=17 Tax=Fusobacteriaceae RepID=D1AKP3_SEBTE Length = 430 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 119/446 (26%), Positives = 196/446 (43%), Gaps = 24/446 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 ++ K+ F +LGC N ++E I + GY+ V D AD+ ++NTC A +++ Sbjct: 1 MSISKKVAFYTLGCKVNQYETEIIKKDFLENGYNEVEFEDRADVYVINTCTVTSIADKKN 60 Query: 64 LEAIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + + A N + VI TGC + + +V I G E+V + + + Sbjct: 61 KKMLRRAKKINPDSVVIATGCYAQTNVEDLKEIKEVDYIIGNVKKEEVYKIFSKKLSNYQ 120 Query: 122 HNPFLSLVPEQGVKLT---PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + K + A++KI +GC C++C IP RG SR VL E Sbjct: 121 VDNIFDQKEYSSQKYAVSRDKARAFVKIQDGCTKFCSYCKIPYARGMSRSRQPESVLEEI 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLH 236 K L +AG KEI+V + S YG D F + E++ K+ R+ Sbjct: 181 KFLGEAGYKEIVVTGINLSEYGSDFGENINFDY----------ILEKILKIEEIDRVRVS 230 Query: 237 YVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 VYP + I L+ E K ++P+L + +Q +ILKLMKR + + +K+ +E Sbjct: 231 SVYPDTLSEKFISLLKENKKLMPHLHVSIQSLDDKILKLMKRNYRAEFVVELLKKVQEEV 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P+ + + I GFP E EE+F + +K+ F YS E A A ++ EV Sbjct: 291 PDSAITADIITGFPQEEEENFWNTFENMKKINFSDFHIFPYSDREKTAAAAFTGKIEPEV 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +L++ E ++ + V I+E+ A G + V +N Sbjct: 351 KKERVKILEKLKKSKIKEFREKFLDTVQKVYIEEIKAGKAYGYTENYL-----RVEVNS- 404 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 + K DI+ VK+ + L G + Sbjct: 405 VSHKVADIVEVKIMSSAGDLLKGEVI 430 >UniRef50_Q4FNN5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Candidatus Pelagibacter RepID=MIAB_PELUB Length = 446 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 112/451 (24%), Positives = 213/451 (47%), Gaps = 34/451 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI + GC N DS RI ++ G++ Y+DA+ ++NTC D A ++ I Sbjct: 3 KKIFIKTFGCQMNEYDSNRIFDTVKKIGFEKTEKYEDANCYLLNTCHIRDKAKEKVYHEI 62 Query: 68 GEALN-----ENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + V+V GC+ E ++ + P + + GP SY ++ E + +++ K Sbjct: 63 GRVKKIFREKKKPIVVVAGCVAQAENQEMLKREPYIDIVIGPQSYHKINEAILNHLKNKK 122 Query: 122 HNPFLSLVP-------EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 Q + ++L I EGC+ C FC++P RG SRP ++ Sbjct: 123 KEEETEFDTISKFNYLSQIKNKDSKVSSFLTIQEGCDKFCHFCVVPYTRGPEYSRPFDQI 182 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 ++EAK LV +G KEI+++ Q+ +AY D + + K + L +L R Sbjct: 183 INEAKELVQSGAKEIILLGQNVNAYSYDEEGK---------KYRLSDLLIKLDSFDKLER 233 Query: 235 LHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + Y +P DD+I + K++P + +P+Q S +IL LM R +++ L ++ Sbjct: 234 IRYTTSHPKDMTDDLINVYKTSSKLMPLVHLPVQSGSNKILNLMNRKHTIEEYLLVYEKL 293 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R+I P++ S FI+G+P E E+DF+M ++ +++ + F +SP G A L V Sbjct: 294 RKINPKIEFSSDFIIGYPEEDEQDFKMTMELIEKVKFINSYSFIFSPRPGTVAANLT-LV 352 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGA 409 ++ ++R + ++ + + + V+++ ++G GR+ E + Sbjct: 353 DQKKSKQRLEIIQEKLFNNQIKKNKSLENKILNVLVENKMKDGIKLFGRT-----EYMTS 407 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V +G G +++V++ +++ L+G Sbjct: 408 VIFDGNIE-NIGKLVQVEIISSNQNSLFGKL 437 >UniRef50_Q9UXX9 Putative methylthiotransferase PYRAB17290 n=9 Tax=Thermococcaceae RepID=Y1729_PYRAB Length = 425 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 118/443 (26%), Positives = 211/443 (47%), Gaps = 33/443 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI + GC +N D E + L G+++V D+ ++V+VN+C D ++ I Sbjct: 3 KIYIENYGCARNRADGEIMAALLHLAGHEIVYDPDEGEIVVVNSCAVKDPTERKIARRIK 62 Query: 69 EALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS- 127 E L+ KVIVTGCL + + +V I G S +++++ V + + K Sbjct: 63 ELLDSGKKVIVTGCLPHVNPDVIDE--RVSGILGVKSIDRIIQAVEYALRGEKLISVPDW 120 Query: 128 ----LVPEQGVKLTPRH-YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 L +L+PR Y + I+EGC + CT+C RG L S +++ K + Sbjct: 121 RKRNLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGWVKWAI 180 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYP 240 G KEI + ++DT YG D+ T++ L ++++ + R+ + P Sbjct: 181 KQGYKEIWLSAEDTGCYGFDIG------------TNLAKLLDEITAIEGEFRVRVGMMNP 228 Query: 241 YP---HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +D++I + KI +L +P+Q IL+ M R +V+ +K++R+ P+ Sbjct: 229 NHVLKFLDELIEAYQDEKIYKFLHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKFPD 288 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 L L + IVGFPGE +E FQ ++ ++ R D+V +YSP G A Q+P + + Sbjct: 289 LNLHTDIIVGFPGEDDEAFQRSVELIRRIRPDKVNVSRYSPRPGTIAAKWK-QLPGWIVK 347 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER +++ QIS E Q+ +G+++ V+I ++G + DA ++ + N Sbjct: 348 ERSRLLHRIRLQISYEINQKYIGKKVEVLIHGEGKKGNV-----DAVTMNYKHVILPFGN 402 Query: 418 VKPGDILRVKVEHADEYDLWGSR 440 G+ ++++A L G Sbjct: 403 --SGEFRIAEIKNATSTYLLGEV 423 >UniRef50_D1PM52 2-methylthioadenine synthetase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM52_9FIRM Length = 465 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 117/440 (26%), Positives = 192/440 (43%), Gaps = 34/440 (7%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 K T ++ F +LGC N ++ + GY VV + + AD+ +VN+C + Q+ Sbjct: 28 KGTITMRVTFYTLGCKVNQNETGALAQLFEESGYTVVSNEEAADVYVVNSCTVTNFGDQK 87 Query: 63 SLEAIGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S + + A EN ++TGC + + +TG + +L V + Sbjct: 88 SRKWLRRAKRENPGAVTVLTGCYPQAFPEEASEIAEADVVTGSGNRRSILHDVQMVLNGE 147 Query: 121 KHNPFLSLVPEQGVKL--------TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + E+G + A++K+ +GCN RC +C+IP RG + SR Sbjct: 148 QERVIDIRPHEKGERFEELPMDKFAEHTRAFVKVEDGCNRRCAYCVIPRARGPVRSREES 207 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 +L E RL +AG KEI++ + +YG D TS+V L E+ + + Sbjct: 208 SILQELHRLTEAGYKEIVLTAISLPSYGTDSG------------TSLVELVEKAAAVPGV 255 Query: 232 -WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 RL + P D+VI ++ K+ P + LQ + L+ M+RP + + Sbjct: 256 ERLRLGSLDPDMLHDEVILRLSRVKKLCPQFHLSLQSGCDKTLRAMRRPYTTAQFAKIAD 315 Query: 290 QWREICP--ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + R ++ + IVGFPGETEEDF+ + F+ +V F YS EG A Sbjct: 316 KLRHAFGAENVSFTTDVIVGFPGETEEDFEASMAFVTGQHFLKVHVFPYSRREGTPAYDF 375 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEI 406 PDQ+PE KE+R R + + AE + GR V+++ G + P Sbjct: 376 PDQIPEHEKEDRSRRMTAAVEAVRAEEAVKMQGRTAEVLLETPLSATLFTGYTKQYLP-- 433 Query: 407 DGAVYLNGETNVKPGDILRV 426 V + + GDI++V Sbjct: 434 ---VLVTAP-DHHTGDIVQV 449 >UniRef50_C7RAG6 MiaB-like tRNA modifying enzyme n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAG6_KANKD Length = 447 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 105/434 (24%), Positives = 195/434 (44%), Gaps = 28/434 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + +LGC N + + + G + D AD++++NTC A ++S + + Sbjct: 3 VHLSALGCRLNEAELQNWANSFQRLGLSLTSEVDAADLIVLNTCAVTAEAARKSRQTVRR 62 Query: 70 --ALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 N + +VTGC + E + V + + ++E + P F + Sbjct: 63 FHRANPQARKVVTGCYASLEPEEVAQIMGVDLVVVNEDKDALVEQAKQLLDIPAMPEFAT 122 Query: 128 LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 E + R A++KI +GC +RCT+CI+ RG+ SR I +++ E +L GV+ Sbjct: 123 EPGESALFARNRERAFIKIQDGCRYRCTYCIVTVARGEERSRTIQDLVDEVNQLHAEGVQ 182 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY--VYPYPHVD 245 EI++ YG D+ +S+ L E + + R+ + V P+ + Sbjct: 183 EIVLAGVHVGGYGSDID------------SSLYELVETILRDTDMPRIRFASVEPWDLGE 230 Query: 246 DVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 + L A +++P++ +P+Q + +L+ M R + Q + + + I Sbjct: 231 NFFELFANPRLMPHMHLPIQSGADTVLRRMSRRCKTSSFSELVNQAKTQVAGFNVTTDVI 290 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VGFPGET+E+F++ + +++E + F YS EG A LP ++ +E+K+ER +R + Sbjct: 291 VGFPGETDEEFELTMQYIEEVGFGHIHIFTYSDREGTKAARLPGKITKEIKKERSHRLHE 350 Query: 366 LQQQISAERLQEKVGREILVIIDEVDEEGAIG--RSMADAPEIDGAVYLNGETNVKPG-- 421 L ++ L+ +VG + V+ + ++ G R P Y T + PG Sbjct: 351 LAARLKVAELERQVGLIVPVLWESSNQYTEEGNQRYFGYTPN-----YHKIATEIPPGLS 405 Query: 422 ---DILRVKVEHAD 432 IL K+E D Sbjct: 406 PERTILNTKIESVD 419 >UniRef50_Q3ZYS0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=5 Tax=Dehalococcoides RepID=MIAB_DEHSC Length = 418 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 108/445 (24%), Positives = 194/445 (43%), Gaps = 42/445 (9%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P ++GC N +S+R+ GY + +DA++V+VN+C + A + + Sbjct: 1 MPGYYLWTIGCQMNQAESDRLGRLFELWGYSLADKAEDAELVLVNSCVVREHAENKVVNR 60 Query: 67 I-----GEALNENGKVIVTGCL-GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + N K+ +TGCL G I++ P V I GP S +P Sbjct: 61 LHLLRSLKNKNPKLKIALTGCLVGQDISLIKKKFPFVDYIFGPGS-----------MPDW 109 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + P ++P L P A + I +GCN+ CT+C++P RG SR I E+ E Sbjct: 110 REIPEGFILP-----LRPPVSANVTIMQGCNNFCTYCVVPYRRGREKSRSIAEIGCEVAE 164 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 LV G +E++++ Q+ +YG D+ P K + L L + R+ ++ Sbjct: 165 LVRRGSREVVLLGQNVDSYGHDL----------PEKPCLADLLSALHDITGLLRIRFLTS 214 Query: 241 YP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P +I MA K+ L +P+Q IL M+R + + +++ + P+ Sbjct: 215 HPKDISQKLIDAMAHLPKVCRSLSLPVQSGDDTILASMRRGYTNQQYRELVERIKTAMPD 274 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPDQVPEEVK 356 ++L++ IVGFP E EE F + + D + YSP A + D VP K Sbjct: 275 ISLQTDLIVGFPSENEEQFNQSYKLMADIGYDAIHVAAYSPRPQTVAARDMADDVPVIEK 334 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 + R LQ++ + + V+++ + + GR++ V+L + Sbjct: 335 KRRLKLIEDLQKETVGKANAALMDTFAEVLVEGLQKNKWQGRTLGGK-----LVFLESDL 389 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 ++ G +++VK+ + L V Sbjct: 390 PLE-GCLVKVKIFKTSPWSLQAKLV 413 >UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms RepID=CK5P1_DICDI Length = 607 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 118/487 (24%), Positives = 211/487 (43%), Gaps = 58/487 (11%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES---- 63 K+ + GC N+ D E I + +++ GY + ++ AD+V +NTC ++A + Sbjct: 107 RKVWIETYGCQMNVSDEEVICSIMKSSGYTISNDFNTADIVFLNTCSIRENAEAKIWLRL 166 Query: 64 --LEAIGEAL-NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 L AI N V V GC+ + ++++ E KV + GP +Y + + Sbjct: 167 TELRAIRRKQGRPNLIVGVLGCMAERLKEKLLESDMKVDIVVGPDAYRSLPSLLATLEDG 226 Query: 120 PKHNPFLSLVP--------EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + ++ + K + AY+ I GCN+ C++CI+P RG SRPI Sbjct: 227 EQQTAINVILSADETYADIKPVRKSDNQVSAYVSIMRGCNNMCSYCIVPFTRGRERSRPI 286 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGV-----------------------DVKHRTG 208 +L E K L D G KEI ++ Q+ +++ +K R G Sbjct: 287 DSILREVKDLSDQGFKEITLLGQNVNSFNYYEESNNNNNENFIDTQKNKLELESLKPREG 346 Query: 209 FHNGEPVKT---SMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDI 262 F + L E +SK+ R+ + P+P DD++ L+ I L I Sbjct: 347 FKTIYKSPKKGITFTKLMELVSKVDPEIRIRFTSPHPKDFPDDLLELIKNQPNICKQLHI 406 Query: 263 PLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDF 322 P Q S ++L+ M+R + + + I + + P + S FI GF GE+++D + Sbjct: 407 PAQSGSSKVLESMRRGYTRESYIELIDTIKRVLPGCAISSDFISGFCGESDQDHNETISL 466 Query: 323 LKEARLDRVGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGR 381 ++ + F YS E A+ L D VP +K R + + + E+ Q ++G Sbjct: 467 MEYVGYENAFMFMYSLREKTHAHRQLKDDVPTTLKNSRLTQVVDTFYKRLKEKNQLEIGN 526 Query: 382 EILVIIDE---VDEEGAIGRSMADAPEIDGAVYLNGE---TNVKPGDILRVKVEHAD-EY 434 LV++D E+ +GR+ + + V ++ + ++K G+ V++ D E Sbjct: 527 HHLVLVDGFSKRSEKDFVGRT-----DTNKKVLISNDIENQDIKVGEYYIVEIIKGDSEV 581 Query: 435 DLWGSRV 441 L G + Sbjct: 582 TLKGKPI 588 >UniRef50_C1DVQ2 Putative uncharacterized protein n=3 Tax=Hydrogenothermaceae RepID=C1DVQ2_SULAA Length = 445 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 111/444 (25%), Positives = 197/444 (44%), Gaps = 31/444 (6%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + + K+ F +LGC N ++ + + +GYD+ AD+ IVNTC + A Sbjct: 1 MRLESRKLKVAFATLGCRMNQFETSALEDQFSLKGYDITDFESVADIYIVNTCTVTNDAD 60 Query: 61 QESLEAIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + S + + +A N N V+ TGC Q P++ + G VLE V +Y+ Sbjct: 61 RTSRKTLRQAKRRNPNAIVVATGCYAQVSPQELAKIPEIDLVIGNSHKTAVLEIVENYIN 120 Query: 119 KPKHNPFL--------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LK+ EGCN C+FCIIP RG + S Sbjct: 121 EKFENKVFIDNIFRENDFKTFFISTFYEGSRPILKVQEGCNSFCSFCIIPFARGKVRSAK 180 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +++++ K LVD G KEI++ S +G D K ++ L +QL + Sbjct: 181 IQDIVNQVKFLVDKGYKEIVLTGTQLSQFGYDHKEGY-----------LLDLLKQLVNVE 229 Query: 231 I--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL + D +I + + KI P+ + +Q A R+LK MKR SV + + + Sbjct: 230 GLYRIRLSSMGINELDDYLIDFLTTQEKIAPHFHLSIQSADDRVLKDMKRNYSVKQYVEK 289 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 +++ + P+ + + I GFP E E F+ + ++E + F YS + A Sbjct: 290 VEKILKNRPDTAIGTDIITGFPTEDETAFKNTVKNVEEIPFAYIHVFTYSMRDNTSAVKF 349 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 D+V +VK+ER ++ ++ S + ++ +G+++ +I E+ IG + Sbjct: 350 GDRVSPQVKKERTKILREIGERKSIDFRKKFLGKDMEFLIITEKEDYKIGLTGNY----- 404 Query: 408 GAVYLNGETNVKPGDILRVKVEHA 431 ++ +T+ I++ K+ Sbjct: 405 --IHAKIKTDQPLNSIVKSKLTKV 426 >UniRef50_B4JIJ9 GH19109 n=4 Tax=cellular organisms RepID=B4JIJ9_DROGR Length = 647 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 112/476 (23%), Positives = 201/476 (42%), Gaps = 45/476 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++ F GC N D+E + + L GY AD+V++ TC D A Q+ + Sbjct: 158 RRVHFEVYGCQMNTNDTEVVWSILHENGYQRCEDVASADVVMLVTCAVRDGAEQKIWHRL 217 Query: 68 G--EALNENG-------KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLE--HVHH 115 AL E ++ + GC+ + + + E V I GP SY+ + V Sbjct: 218 RHLRALKERRGTRRHPLQLTLLGCMAERLKERLLEQEQCVDVIAGPDSYKDLPRLLAVAR 277 Query: 116 YVPKPKHNPFLSLVPEQGVKL-----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LSL + + A++ I GC++ CT+CI+P RG SRP Sbjct: 278 HYGNSAINVLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRP 337 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAY-------------GVDVKHRTGFHNGEPVKT 217 + ++ E + L GVKE+ ++ Q+ ++Y G + + + Sbjct: 338 LDSIVREVRTLQQQGVKEVTLLGQNVNSYRDRSGENNQATTDGNMASGFSTVYKPKTGGL 397 Query: 218 SMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKL 274 L + +++ R+ + P+P D+V+ ++ + + L +P Q + +L Sbjct: 398 PFAVLLQSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTAVLAR 457 Query: 275 MKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF 334 M+R + D L + R++ PE+ L S FI GF GETE +F+ + ++ R + F Sbjct: 458 MRRGYTRDAYLQLVTHIRQMLPEVGLSSDFICGFCGETEAEFEDTVTLIESVRYNVAFLF 517 Query: 335 KYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE 393 YS E A+ D VP VK R R +Q + + + G++ L++I+ + Sbjct: 518 AYSMREKTTAHRRYVDDVPTAVKTARLQRMVQAFRAGATHLHKRFEGQQQLILIEGKSKR 577 Query: 394 ---GAIGRSMADAPEIDGAVYLN--------GETNVKPGDILRVKVEHADEYDLWG 438 GR+ A+ I A + N+ GD + ++ ++ L G Sbjct: 578 SDSHWFGRNDANIKVIVPAASIPTTADAGESSRRNIGVGDFVVARIVESNSQVLKG 633 >UniRef50_A4YEI0 RNA modification enzyme, MiaB family n=3 Tax=Sulfolobaceae RepID=A4YEI0_METS5 Length = 418 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 110/440 (25%), Positives = 204/440 (46%), Gaps = 28/440 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 +I F + GC N D+ ++T L+ +++V S + AD++++NTC ++ + I Sbjct: 1 MRIYFETYGCALNKGDTYSMMTLLKGRNHEIVNSEEQADVLVINTCAVRMETEEKMKKRI 60 Query: 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 E K++V GCL E + + GP S V++ V + + Sbjct: 61 LELSKTGKKLVVAGCLAGAEPGLVMSLAPQSSLIGPQSIGDVVKAVES---RERIVSLHG 117 Query: 128 LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 +P + + + I++GC C FCI R +L S P ++ A++ ++ G K Sbjct: 118 ELPSVLPSVFEGLISVIPIADGCAGSCNFCITKLARKELRSYPPRMIVETARKAIEKGAK 177 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVYPYP--- 242 EI + QDT+AYG+D+ + L ++S L R+ + P Sbjct: 178 EIELTGQDTAAYGLDLGRDI----------RLADLVGEVSSLEGDFMVRVGMMTPELAMR 227 Query: 243 HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +DD++ K+ + +P+Q + ++L+ M R ++D +++ R+ P + + + Sbjct: 228 QLDDLLDAWDNPKVYKFFHLPVQSGNDQVLRAMNRKYTLDEFREIVREIRKRFPLVNITT 287 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVG PGE E F+ L+ +KE R +R+ YS + + QVP +K+ER R Sbjct: 288 DIIVGHPGEDENAFEDTLNLMKELRFERIHIAMYSLRPNTRSAMMT-QVPGPIKKERLKR 346 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNGETNVKPG 421 + L +++S E +E VGR++ V++ E ++ IGR++ P I + G Sbjct: 347 AVTLYEELSREIHREYVGRKMKVLVLENGKDNTKIGRTLNYIPVI--------VKDADLG 398 Query: 422 DILRVKVEHADEYDLWGSRV 441 ++ + +DL GS V Sbjct: 399 KWYEAEITDSSFFDLRGSIV 418 >UniRef50_D0GPB7 Protein YqeV n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPB7_9FUSO Length = 453 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 115/448 (25%), Positives = 196/448 (43%), Gaps = 19/448 (4%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 K + + F +LGC N ++E I + Y V + AD+ IVNTC + A ++ Sbjct: 16 KNNAERTVAFYTLGCKVNQYETEIIRKDFLDHNYKEVDFDEKADVYIVNTCTVTNVADKK 75 Query: 63 SLEAIGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + + A N N V+ TGC + ++ I G E V ++ V Sbjct: 76 NRKMLRRAKNTNPDSLVVATGCYAQTNLDDLKEMKEIDFIIGNSKKENVFNIINKNVSHY 135 Query: 121 KHNPFLSLVPEQGVKLT---PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + K T + A++KI +GC+ C++C IP RG SR VL E Sbjct: 136 QVDNIFDEKEYSSNKYTILREKARAFVKIQDGCSKFCSYCKIPYARGLSRSRATEHVLEE 195 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 L + G KE+++ + S YG+D++ KT +L E++ + R+ Sbjct: 196 INYLGEQGYKEVVLTGINMSEYGLDLEP----------KTDFDTLLEKILAVKSVERVRV 245 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 VYP D + ++ K++P+L + +Q +IL+LM+R + + +++ + Sbjct: 246 SSVYPDTITDKFLGMLKNNPKLMPHLHVSVQTLDDKILRLMRRNYKAEFVVNTLEKVKRE 305 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 PE+ L + IVGFP E EE+F + L + F YS E A L ++ Sbjct: 306 VPEVALTADIIVGFPQEEEENFANTMKNLDSLGFADLHVFPYSDREKTTAMLLDGKIDAV 365 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE-IDGAVYLN 413 K+ R + +L AE ++ VG + V I+E+ E+ A G + ID Sbjct: 366 EKKRRVKKVEELNNIKYAEFRKKTVGSKQRVYIEEIVEDKAFGYTENYLKVFIDLKKGEK 425 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 +VK D++ K+ D L G + Sbjct: 426 NNLDVKVSDLVNTKIVDFDGILLEGDII 453 >UniRef50_Q607P8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q607P8_METCA Length = 436 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 107/427 (25%), Positives = 182/427 (42%), Gaps = 18/427 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 +I SLGC N + E E + G+ +V DAD++++N+C AV++S + I Sbjct: 1 MRINLQSLGCRLNEAELESWAREFQAAGHRLVSETGDADLIVLNSCAVTAEAVRKSRQMI 60 Query: 68 GE--ALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 L+ +++++GC V + +++E + F Sbjct: 61 RRTQRLSPRARLVLSGCYATLHGDEAAAL-GVDLVVSNADKSRLVEIAARELALEAMPEF 119 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 + E + R A++K+ +GC +RCTFCI+ RG+ SR EV+ E +RL G Sbjct: 120 STEPGEAALFALGRQRAFVKVQDGCRYRCTFCIVTVARGEERSRLPAEVIREIRRLQAEG 179 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVD 245 V+E+++ YG D+ G P+ + S+ ++ RL + P+ Sbjct: 180 VQEVVLTGVHLGGYGSDL--------GLPLDALIRSILQETE--IPRLRLGSLEPWDLPP 229 Query: 246 DVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 L + +P+L +PLQ S +LK M R + R P++ + + I Sbjct: 230 GFFDLFENPRFMPHLHLPLQSGSDTVLKRMARRCKSEEFARLADHARRQVPDINITTDII 289 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VGFPGETE +++ L F++ + F YS EG A A+ VP E+K+ER + Sbjct: 290 VGFPGETEREWEESLQFIETIGFGDIHVFTYSVREGTKAAAMGGHVPAEIKKERSRVLHE 349 Query: 366 LQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILR 425 L L VGRE+ V+ + + G + V + I Sbjct: 350 LALGQKRALLGRFVGREMPVLWENRRDGADRGYTPNYL-----RVAIQTPETGLTNRITP 404 Query: 426 VKVEHAD 432 V++ D Sbjct: 405 VRLVKVD 411 >UniRef50_B9YB19 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YB19_9FIRM Length = 439 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 183/413 (44%), Gaps = 27/413 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + +LGC N +SE LR GY V + AD+ I+ TC ++A +S + I + Sbjct: 10 VAISTLGCKVNAYESESTAQALRQRGYQTVDFKEKADVYIIFTCAVTNTAASKSRQKIHQ 69 Query: 70 ALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH----- 122 A +N +V GC + K+ + G +++ + + + + + Sbjct: 70 ARRQNPDALVCAVGCYVQIQADQMAEQEKIDILVGSSGKDKLPQLIDEALRQRREPIVEL 129 Query: 123 ---NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + + AYLK+ +GCN C +CIIP RG S P+ E L EA+ Sbjct: 130 HDVRTSAEFEMLPLDEFEHQTRAYLKVQDGCNQFCAYCIIPYARGRERSLPLDEALKEAR 189 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 RL KEI++ T YG D TS+ L + ++ R+ Sbjct: 190 RLAQK-HKEIVLAGIHTGRYGKDRD------------TSLCDLIRGMCEIEPLERIRISS 236 Query: 238 VYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 + D+++ LM + KI +L IPLQ LK M RP + + +AR+++ R Sbjct: 237 IEITEITDELLTLMETQPKIARHLHIPLQAGCDATLKRMGRPYTTAQFMARVEEIRTRID 296 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +++ + IVGFP E+E +F + FLK+ + + F +SP G A + Q+ EVK Sbjct: 297 GISISTDLIVGFPQESEAEFAATMAFLKQIQFSFIHVFPFSPKTGTPAQRMSGQISSEVK 356 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAP-EIDG 408 ++R + + + +G+++ VII+ A G S P +IDG Sbjct: 357 KQRARQVGEFSRNSYYAVKSSWIGKDVDVIIETCVNGVAFGHSSEYLPVQIDG 409 >UniRef50_C0R0S3 MiaB, 2-methylthioadenine synthetase n=2 Tax=Brachyspira RepID=C0R0S3_BRAHW Length = 440 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 151/447 (33%), Positives = 237/447 (53%), Gaps = 25/447 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 I SLGC KN VD E IL L+ +G+++ + +DAD++++NTC FI+ + +ES++AI Sbjct: 4 IYLHSLGCEKNTVDGEHILAILQKKGFNITNNPEDADIIVINTCAFIEDSKKESIDAIFD 63 Query: 69 ----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + + ++IV+GC+ + + E+ +V G + E +L+ V Sbjct: 64 HSMYKKYGKCKRLIVSGCMSERYKENFLEMFKEVDSAIGIYDLENILKAVEEDGFHDAKE 123 Query: 124 PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 V ++ Y++IS+GC+ C+FC IP +RG+ SR I +++ EA+ Sbjct: 124 NTEYKEYGDRVNTGTKYSVYIRISDGCHANCSFCAIPGIRGEHRSRKIEDIVKEAENYAK 183 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPY 241 G KEI +I+Q+T+ YG D+ K ++ L + LSK+ W R+ Y P Sbjct: 184 NGAKEINLIAQETTFYGYDIYK----------KLALPDLLKALSKVEGIEWIRVLYQNPV 233 Query: 242 PHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPG-SVDRQLARIKQWREICPELT 299 D++I K++PY DIPLQH ILK M R S I + R + Sbjct: 234 VLNDEIIESFFNTEKVVPYFDIPLQHVDKDILKDMNRGTRSYKFYREMIDKIRSYNNDAV 293 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 +R++ IVGFPGET E F+ L+ F++ A+LDRVG F YS E A + K+ Sbjct: 294 IRTSLIVGFPGETAESFKKLIKFVRNAKLDRVGVFTYSEEENTKALLINKPKMSRNKKLI 353 Query: 360 WNR-FMQLQQQISAERLQEKVGREILVIID-EVDEEGAIGRSMADAPEIDGAVYL---NG 414 M+ ++S +RL+ +GR I V+I+ + D+ IGRS+ DAPE+DG V + N Sbjct: 354 LREKLMRAAIEVSEKRLERFIGRTIDVLIEKKEDDNKFIGRSIYDAPEVDGYVEVYNENT 413 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 N+ GDI++V V H EYDL G+ + Sbjct: 414 NNNINIGDIVQVAVTHNTEYDLIGNVI 440 >UniRef50_D2L881 RNA modification enzyme, MiaB family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L881_9DELT Length = 446 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 112/451 (24%), Positives = 187/451 (41%), Gaps = 28/451 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K +++GC N+ D + + L+T G+ P ++ AD+ I+ TC + Q+ + Sbjct: 1 MKFHVITMGCQMNVGDGDWLTRSLQTTGFTPAPEHE-ADLFILFTCSVREKPEQKVASEL 59 Query: 68 GEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G N N V V GC+ + + P V + G + +P Sbjct: 60 GRIADRHRDNPNACVAVGGCVAQQLGTSLWRRFPMVRLVFGTDGIAAAPRALARLAEEPG 119 Query: 122 HN----PFLSLVPEQGV---KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 F PE+ + A++ I +GC++ C +CI+P +RG SR V Sbjct: 120 LRLSLLDFTESYPERDQSWPEDRLPPRAFVSIMQGCDNYCAYCIVPFVRGRQKSRGAAAV 179 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + L + GV+E+ ++ Q+ ++YG+D TS L + ++ + R Sbjct: 180 VEECRNLAERGVREVTLLGQNVNSYGLDASGDG---------TSFARLLDAVAAVPGIAR 230 Query: 235 LHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P DDVI ++ P L +P+Q S RIL+ M R + + Sbjct: 231 IRFTTSHPKDLSDDVIERFGSLPQLCPALHLPVQSGSDRILRRMGRRYDTADYRRLVAKL 290 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P+L L + IVGFPGETE DF+ LD ++E R + F Y G + L ++ Sbjct: 291 RRARPDLALTTDLIVGFPGETEADFKETLDLVREVRFESGFSFMYGDRPGTASERLEPKI 350 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD-EEGAIGRSMADAPEIDGAV 410 E K R L L +VG ++I+ +GA G S V Sbjct: 351 APEAKAARLAELQTLLDAGLTASLAARVGTSAEILIEGPSRRDGAAGPSWRGRDPWGRIV 410 Query: 411 YLNGET-NVKPGDILRVKVEHADEYDLWGSR 440 L G I+ ++ A ++ L G Sbjct: 411 NLPLPGHGDAAGTIVPARIVQAKKHSLIGEA 441 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 495 e-138 UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO... 491 e-137 UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO... 488 e-136 UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 487 e-136 UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO... 483 e-135 UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO... 482 e-134 UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO... 482 e-134 UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO... 482 e-134 UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mit... 481 e-134 UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 481 e-134 UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransfer... 480 e-134 UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax... 479 e-134 UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 478 e-133 UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 478 e-133 UniRef50_C4Z0L1 2-alkenal reductase n=16 Tax=Bacteria RepID=C4Z0... 476 e-133 UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 473 e-132 UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO... 472 e-131 UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO... 471 e-131 UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxyd... 471 e-131 UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 470 e-131 UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransfer... 469 e-131 UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Ba... 468 e-130 UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicute... 466 e-130 UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO... 466 e-130 UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostri... 466 e-130 UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransfer... 465 e-129 UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO... 464 e-129 UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 463 e-129 UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rho... 463 e-129 UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Breviba... 463 e-129 UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransfer... 462 e-129 UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dic... 461 e-128 UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 460 e-128 UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransfer... 460 e-128 UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 460 e-128 UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 460 e-128 UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=... 459 e-128 UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransfer... 459 e-128 UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fu... 459 e-127 UniRef50_Q2LQ68 Ribosomal protein S12 methylthiotransferase rimO... 458 e-127 UniRef50_A7NIS8 Ribosomal protein S12 methylthiotransferase rimO... 458 e-127 UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO... 458 e-127 UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Vic... 458 e-127 UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotran... 458 e-127 UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransfer... 458 e-127 UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 457 e-127 UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 457 e-127 UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO... 457 e-127 UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Seb... 457 e-127 UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO... 456 e-127 UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 455 e-126 UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO... 455 e-126 UniRef50_A9F1Y8 Ribosomal protein S12 methylthiotransferase rimO... 455 e-126 UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO... 455 e-126 UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO... 454 e-126 UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 454 e-126 UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 453 e-126 UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillone... 453 e-126 UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 453 e-126 UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavo... 453 e-126 UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Vic... 453 e-126 UniRef50_A6NW35 Putative uncharacterized protein n=1 Tax=Bactero... 453 e-126 UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerof... 452 e-125 UniRef50_A0L887 Ribosomal protein S12 methylthiotransferase rimO... 452 e-125 UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sph... 452 e-125 UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Aci... 451 e-125 UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO... 451 e-125 UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Cor... 451 e-125 UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransfer... 451 e-125 UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Cal... 451 e-125 UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO... 451 e-125 UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fu... 450 e-125 UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Cht... 450 e-125 UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO... 450 e-125 UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO... 450 e-125 UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransfer... 449 e-125 UniRef50_B1I695 MiaB-like tRNA modifying enzyme n=6 Tax=Clostrid... 449 e-124 UniRef50_B6GBU3 Putative uncharacterized protein n=2 Tax=Collins... 449 e-124 UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 449 e-124 UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bactero... 448 e-124 UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 447 e-124 UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdema... 447 e-124 UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pir... 446 e-124 UniRef50_Q0AXI3 Ribosomal protein S12 methylthiotransferase rimO... 446 e-124 UniRef50_B5EE49 (Dimethylallyl)adenosine tRNA methylthiotransfer... 446 e-124 UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 446 e-124 UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 446 e-124 UniRef50_C7RHT5 RNA modification enzyme, MiaB family n=3 Tax=Ana... 446 e-123 UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 446 e-123 UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO... 446 e-123 UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 445 e-123 UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halother... 445 e-123 UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 445 e-123 UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Sub... 445 e-123 UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO... 445 e-123 UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 ... 445 e-123 UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mi... 445 e-123 UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Vei... 444 e-123 UniRef50_A9A0B5 Ribosomal protein S12 methylthiotransferase rimO... 444 e-123 UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax... 444 e-123 UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candida... 444 e-123 UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bac... 443 e-123 UniRef50_D2RJ51 RNA modification enzyme, MiaB family n=1 Tax=Aci... 442 e-122 UniRef50_B0TAE1 Miab-like tRNA modifying enzyme n=2 Tax=Clostrid... 442 e-122 UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 ... 442 e-122 UniRef50_B2A1N3 RNA modification enzyme, MiaB family n=1 Tax=Nat... 442 e-122 UniRef50_C8WY42 MiaB-like tRNA modifying enzyme n=58 Tax=Bacilla... 442 e-122 UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisp... 441 e-122 UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Rum... 441 e-122 UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 440 e-122 UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclass... 440 e-122 UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 439 e-121 UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2... 439 e-121 UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoni... 439 e-121 UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 438 e-121 UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 438 e-121 UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eub... 438 e-121 UniRef50_C0WDC4 RNA modification enzyme n=1 Tax=Acidaminococcus ... 438 e-121 UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Syn... 438 e-121 UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 437 e-121 UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 437 e-121 UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 437 e-121 UniRef50_A1APR6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 436 e-121 UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 436 e-121 UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 436 e-121 UniRef50_B0P6Q6 Putative uncharacterized protein n=1 Tax=Anaerot... 436 e-121 UniRef50_A8UT74 Putative uncharacterized protein n=1 Tax=Hydroge... 435 e-120 UniRef50_B2KB59 Ribosomal protein S12 methylthiotransferase rimO... 435 e-120 UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiot... 435 e-120 UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 434 e-120 UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 434 e-120 UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 434 e-120 UniRef50_Q6MBU9 Ribosomal protein S12 methylthiotransferase rimO... 434 e-120 UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 434 e-120 UniRef50_Q1JYQ2 MiaB-like tRNA modifying enzyme n=2 Tax=Desulfur... 433 e-120 UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO... 433 e-120 UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostri... 433 e-120 UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2... 432 e-119 UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae Rep... 432 e-119 UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 431 e-119 UniRef50_C0QIB5 2-methylthioadenine synthetase n=1 Tax=Desulfoba... 431 e-119 UniRef50_B3ES11 (Dimethylallyl)adenosine tRNA methylthiotransfer... 431 e-119 UniRef50_B5W2N4 RNA modification enzyme, MiaB family n=5 Tax=Cya... 430 e-119 UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO... 430 e-119 UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bact... 429 e-119 UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 429 e-119 UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisp... 429 e-119 UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO... 429 e-119 UniRef50_C7MNF9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 429 e-118 UniRef50_Q8EUX4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 429 e-118 UniRef50_D2QJ28 RNA modification enzyme, MiaB family n=1 Tax=Spi... 429 e-118 UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransfer... 429 e-118 UniRef50_Q7UK39 Ribosomal protein S12 methylthiotransferase rimO... 428 e-118 UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pir... 428 e-118 UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fib... 428 e-118 UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransfer... 427 e-118 UniRef50_A4WRD4 Ribosomal protein S12 methylthiotransferase rimO... 427 e-118 UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 427 e-118 UniRef50_D1H8D6 Whole genome shotgun sequence of line PN40024, s... 426 e-118 UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 426 e-118 UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 426 e-118 UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=C... 425 e-117 UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=... 425 e-117 UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genom... 424 e-117 UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO... 424 e-117 UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Ato... 424 e-117 UniRef50_A0LIM0 Ribosomal protein S12 methylthiotransferase rimO... 424 e-117 UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bactero... 424 e-117 UniRef50_C4V544 2-methylthioadenine synthetase n=3 Tax=Selenomon... 423 e-117 UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostri... 423 e-117 UniRef50_Q2LVR5 TRNA 2-methylthioadenosine synthase-like protein... 423 e-117 UniRef50_Q2GCU4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 422 e-116 UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO... 422 e-116 UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 422 e-116 UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransfer... 421 e-116 UniRef50_A5GE34 MiaB-like tRNA modifying enzyme n=5 Tax=Geobacte... 421 e-116 UniRef50_B9L1I3 MiaB-like tRNA modifying enzyme YliG, TIGR01125 ... 421 e-116 UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIH... 421 e-116 UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobi... 421 e-116 UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clo... 420 e-116 UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 420 e-116 UniRef50_Q3ZYS0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 419 e-116 UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 419 e-116 UniRef50_A5N6M6 Predicted oxidoreductase n=21 Tax=Clostridium Re... 419 e-116 UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP... 419 e-116 UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransfer... 419 e-116 UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Des... 419 e-115 UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicu... 419 e-115 UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 419 e-115 UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO... 418 e-115 UniRef50_C0GKG0 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Det... 418 e-115 UniRef50_C9M5C2 RNA modification enzyme, MiaB-family n=1 Tax=Jon... 418 e-115 UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO... 418 e-115 UniRef50_D1C3B2 MiaB-like tRNA modifying enzyme n=1 Tax=Sphaerob... 418 e-115 UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collins... 417 e-115 UniRef50_C7MNG6 MiaB-like tRNA modifying enzyme YliG, TIGR01125 ... 417 e-115 UniRef50_Q0AWM7 MiaB-like tRNA modifying enzyme n=1 Tax=Syntroph... 416 e-115 UniRef50_Q96SZ6 CDK5 regulatory subunit-associated protein 1 n=3... 416 e-115 UniRef50_B0PFX8 Putative uncharacterized protein n=4 Tax=Clostri... 416 e-115 UniRef50_B8E0G0 MiaB-like tRNA modifying enzyme n=2 Tax=Dictyogl... 416 e-115 UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Aci... 416 e-114 UniRef50_D1U9N9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Des... 415 e-114 UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmati... 415 e-114 UniRef50_B3EPX5 Ribosomal protein S12 methylthiotransferase rimO... 415 e-114 UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Ta... 414 e-114 UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=... 414 e-114 UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_A4SAH0 Predicted protein n=3 Tax=Mamiellales RepID=A4SA... 414 e-114 UniRef50_D0J9M2 RNA modification protein n=1 Tax=Blattabacterium... 414 e-114 UniRef50_Q7VGP6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 414 e-114 UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 413 e-114 UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 413 e-114 UniRef50_Q9UXX9 Putative methylthiotransferase PYRAB17290 n=9 Ta... 411 e-113 UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotro... 411 e-113 UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 411 e-113 UniRef50_D2L881 RNA modification enzyme, MiaB family n=1 Tax=Des... 411 e-113 UniRef50_Q29AM2 GA19527 n=9 Tax=Bilateria RepID=Q29AM2_DROPS 410 e-113 UniRef50_A0LEL6 RNA modification enzyme, MiaB family n=1 Tax=Syn... 410 e-113 UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=... 409 e-113 UniRef50_D1AKP3 MiaB-like tRNA modifying enzyme n=17 Tax=Fusobac... 409 e-112 UniRef50_B4JIJ9 GH19109 n=4 Tax=cellular organisms RepID=B4JIJ9_... 409 e-112 UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 409 e-112 UniRef50_Q1PXT1 Putative uncharacterized protein n=1 Tax=Candida... 408 e-112 UniRef50_Q9WZT7 Putative methylthiotransferase TM_0830 n=6 Tax=T... 408 e-112 UniRef50_B2A5M5 RNA modification enzyme, MiaB family n=1 Tax=Nat... 407 e-112 UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bac... 407 e-112 UniRef50_A3EVU0 RNA modification enzyme, MiaB family n=3 Tax=Lep... 406 e-112 UniRef50_Q607P8 Putative uncharacterized protein n=2 Tax=Gammapr... 406 e-112 UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmati... 406 e-112 UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=... 406 e-111 UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase... 405 e-111 UniRef50_D0LST9 RNA modification enzyme, MiaB family n=1 Tax=Hal... 405 e-111 UniRef50_A9HM32 MiaB-like tRNA modifying enzyme n=12 Tax=Alphapr... 404 e-111 UniRef50_A4S5H4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 404 e-111 UniRef50_A4YEI0 RNA modification enzyme, MiaB family n=3 Tax=Sul... 404 e-111 UniRef50_B8J4P8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 404 e-111 UniRef50_Q726F7 Ribosomal protein S12 methylthiotransferase rimO... 404 e-111 UniRef50_UPI000180B378 PREDICTED: similar to CDK5 regulatory sub... 403 e-110 UniRef50_B9YB19 Putative uncharacterized protein n=1 Tax=Holdema... 403 e-110 UniRef50_D0GPB7 Protein YqeV n=1 Tax=Leptotrichia goodfellowii F... 402 e-110 UniRef50_O66772 Putative methylthiotransferase aq_474 n=3 Tax=Aq... 402 e-110 UniRef50_A8F640 MiaB-like tRNA modifying enzyme n=1 Tax=Thermoto... 402 e-110 UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms... 401 e-110 UniRef50_UPI00006CFA0B RNA modification enzyme, MiaB family n=1 ... 401 e-110 UniRef50_D1PM52 2-methylthioadenine synthetase n=1 Tax=Subdoligr... 401 e-110 UniRef50_A6LKT7 MiaB-like tRNA modifying enzyme n=3 Tax=Thermoto... 401 e-110 UniRef50_C1DVQ2 Putative uncharacterized protein n=3 Tax=Hydroge... 400 e-110 UniRef50_B5YKW1 Putative uncharacterized protein n=1 Tax=Thermod... 400 e-110 UniRef50_O29021 Putative methylthiotransferase AF_1247 n=3 Tax=A... 400 e-110 Sequences not found previously or not previously below threshold: >UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=190 Tax=Firmicutes RepID=MIAB_ANOFW Length = 527 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 117/453 (25%), Positives = 211/453 (46%), Gaps = 27/453 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + K + GC N D+E + GY+ +DA+++++NTC ++A + Sbjct: 80 MGNGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKV 139 Query: 64 LEAIGEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHH 115 IG N + + V GC+ +E ++I + V I G H+ ++ + Sbjct: 140 FGEIGHLKPLKQNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNIHRLPYILKE 199 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + ++ P+ A++ I GC+ CT+CI+P RG SR Sbjct: 200 AYMSKEMVVEVWSKEGDVIENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRR 259 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 +++ E + L G KEI ++ Q+ +AYG D +K + L ++L K+ Sbjct: 260 PEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDFTD---------MKYGLGDLMDELRKID 310 Query: 231 I-WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 I R +P D +I ++A+G ++ ++ +P+Q S +LK+M R + ++ L + Sbjct: 311 IPRIRFTTSHPRDFDDRLIEVLAKGGNLVEHIHLPVQSGSSEVLKMMARKYTREQYLELV 370 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ +E P + L + IVGFP ET+E F+ L +E D F YSP EG A + Sbjct: 371 RKIKEAIPGVALTTDIIVGFPNETDEQFEETLSLYREVEFDSAFTFIYSPREGTPAAKMV 430 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG 408 D VP EVK+ER R L +ISA++++E G+ + V+++ + +A + Sbjct: 431 DNVPMEVKKERLQRLNALVNEISAKKMKEYEGQVVEVLVEGESKNNPD--VLAGYTRKNK 488 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V G + G ++ V++ A + L G V Sbjct: 489 LVNFVGPKSA-IGQLVNVRITEAKTWTLNGEMV 520 >UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO n=48 Tax=cellular organisms RepID=RIMO_PSE14 Length = 447 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 311/446 (69%), Positives = 362/446 (81%), Gaps = 6/446 (1%) Query: 1 MSKVT--PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDS 58 MS VT PK+GFVSLGCPK LVDSERILT+LR EGY+VV +Y+DAD+V+VNTCGFID+ Sbjct: 1 MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT 60 Query: 59 AVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 A ESLE IGEA+ ENGKVIVTGC+G + IR+VHP VL +TGP YEQV+ VH VP Sbjct: 61 AKAESLEVIGEAIKENGKVIVTGCMGVDANVIRDVHPSVLSVTGPQQYEQVVNAVHDVVP 120 Query: 119 -KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + HNP + LVP QGVKLTPRHYAYLKISEGCNH C+FCIIPSMRG LVSRP+G+VL E Sbjct: 121 PRKDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 AKRLV +GVKE+LVISQDTSAYGVDVK+RTGF +G+PVKT M LC+ L +G+W RLHY Sbjct: 181 AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPVKTRMTELCQALGSMGVWVRLHY 240 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 VYPYPHVD++IPLMA GKILPYLDIP QHASP+ILKLMKRP D+ LARIK WRE CP+ Sbjct: 241 VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD 300 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-VPEEVK 356 L +RSTFIVGFPGETEEDFQ LLD+L EA+LDRVGCF+YSPVEGA AN L VP++VK Sbjct: 301 LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK 360 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 ++RW+RFM QQ ISA RLQ K+G+EI V+IDEVD+ GA+GR DAPEIDG V++ E Sbjct: 361 QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLEE 420 Query: 417 N--VKPGDILRVKVEHADEYDLWGSR 440 V+PGD + +V ADEYDLW Sbjct: 421 GSTVQPGDKIMCRVTDADEYDLWAEM 446 >UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Clostridiales RepID=RIMO_DESHY Length = 445 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 168/453 (37%), Positives = 259/453 (57%), Gaps = 27/453 (5%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T K+ V+LGCPKN VDSE + + T+ Y +V + AD++I+NTC FI+SA ES+ Sbjct: 3 TLNKKVAVVTLGCPKNQVDSEIMTGHMMTK-YQIVNEPEQADIIIINTCTFIESAKAESI 61 Query: 65 EAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + I + ++ TGCL + D++ P++ I G + ++LE + Sbjct: 62 DMILQMSQYKEEGQCQTLVATGCLAQRYGDELLAEIPELDGIMGTGNVAEILETLEEAEK 121 Query: 119 KPKHN------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 F+ V+L+P+ YAY+K++EGC++ CT+CIIP +RG SR Sbjct: 122 SKVRRISAEAPAFIYDETMPRVRLSPKQYAYVKVAEGCDNYCTYCIIPHVRGHFRSRTQE 181 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 +L E + + GVKE+L+I+QDT+ YG D + SL ++++++ Sbjct: 182 SILREVEAMASEGVKEVLLIAQDTTRYGKDRYGEY----------RLPSLIKEIARIEGI 231 Query: 232 -WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RL Y YP D++I +M E K+ YLD+PLQHA ++L M R G++ I Sbjct: 232 EWIRLMYCYPELFTDELITVMKETPKVCRYLDLPLQHAHDKVLAEMNRRGTIREAEGLIH 291 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + R+ P++ LR+T I GFPGETEE+FQ +++F K+ R DR+G F YS E A D Sbjct: 292 KLRQEIPDIRLRTTMITGFPGETEEEFQAVVEFAKKIRFDRLGAFAYSQEESTPAAQRED 351 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDG 408 QVPEE++++R ++ M+LQ I+ E+ Q VG+ + V+I+E + +GRS DAPEIDG Sbjct: 352 QVPEEIRQQRRDQLMELQHDIAYEQQQRWVGQTLKVLIEEALPDQRWVGRSEGDAPEIDG 411 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 VY++ ++ GD + VK+ AD YDL G V Sbjct: 412 VVYVDSPGELEIGDFVLVKITRADSYDLMGEVV 444 >UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_CLOTH Length = 480 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 125/458 (27%), Positives = 218/458 (47%), Gaps = 35/458 (7%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 K + + GC N DSE++ L GY + +++D+VI NTC ++A + Sbjct: 38 KTGKKKLYCLNTFGCQMNEHDSEKLAGMLAEMGYAETDNVNESDLVIYNTCCVRENAELK 97 Query: 63 SLEAIGEAL-----NENGKVIVTGCLGAKED---QIREVHPKVLEITGPHSYEQVLEHVH 114 +G + + V GC+ + + I++ + V I G H+ + E ++ Sbjct: 98 VYGHLGMLKPLKNQKPDLVIAVCGCMMQQPEVVEHIKKTYSHVDLIFGTHNLYKFPELLY 157 Query: 115 HYVPKPKHNPFLSL-----VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + + ++ A++ + GCN+ CT+CI+P +RG SR Sbjct: 158 SAMDSQTTVVDVWDCDGQIAENVAIERKDGVKAWVTVMYGCNNFCTYCIVPYVRGRERSR 217 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 + ++L E + L G KEI ++ Q+ ++YG D+ TS L +++K+ Sbjct: 218 SMDDILEEVRMLGRQGFKEITLLGQNVNSYGKDIGDG----------TSFAELIREVNKI 267 Query: 230 GIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 R+ + +P DD+I M + K+ +L +P Q S RILKLM R + + + Sbjct: 268 PGIERIRFTTSHPKDLSDDLIYAMRDCEKVCEHLHLPFQAGSTRILKLMNRKYTKEDYIN 327 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + +E P++ L + IVGFPGETEEDF LD L++ R D F YS G A Sbjct: 328 LVAKIKENIPDIALTTDIIVGFPGETEEDFSDTLDILEKVRFDNAYTFLYSKRTGTPAAK 387 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADA 403 + DQVPEEVK+ER+ R ++ Q +IS E +G+ + V+++ V + + GR+ + Sbjct: 388 MEDQVPEEVKKERFQRLLETQNRISKEINDTFLGKVVEVLVEGVSKTNDKIFTGRTRGNK 447 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + ++ G ++ V++ + L GS V Sbjct: 448 -----VVNFEADASL-IGKLVNVRINTVKTWSLEGSIV 479 >UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO n=232 Tax=cellular organisms RepID=RIMO_PSYCK Length = 531 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 285/444 (64%), Positives = 349/444 (78%), Gaps = 9/444 (2%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 V PKIGFVSLGCPK LVDSERI+TEL +GY V Y+ AD+V+VNTCGFI+SAVQES Sbjct: 84 VNAAPKIGFVSLGCPKALVDSERIITELSRDGYQVASDYEGADLVVVNTCGFIESAVQES 143 Query: 64 LEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 L+AIGEA+++NGKVIVTGCLG + D+IRE+HP VL +TG H+Y+ V+ V +VPKP Sbjct: 144 LDAIGEAISKNGKVIVTGCLGKEADKIREMHPAVLAVTGAHAYDDVIRAVALHVPKPDCG 203 Query: 122 ----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++P + L+ E G+KLTP HYAYLKISEGCNHRCTFCIIPS+RGDLVSRPI V++E Sbjct: 204 LDASYDPKIDLINEAGIKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIDSVMNE 263 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A L AGVKE+L+ISQDTSAYG+D+K++T F NG P+K+ LC+ L+ LGIW RLHY Sbjct: 264 ALALKKAGVKELLIISQDTSAYGLDLKYKTSFWNGMPLKSKFYDLCQALNDLGIWVRLHY 323 Query: 238 VYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 VYPYPHVD V+ LM E K+LPYLDIP QHAS RILK MKRP + LARI WREICP+ Sbjct: 324 VYPYPHVDKVVELMGEKKLLPYLDIPFQHASHRILKAMKRPAHSENTLARIHAWREICPD 383 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + +RSTF+VGFPGETEEDFQ LLD+L EARLDRVG F YS VEGA AN LP+ VPE+VK+ Sbjct: 384 IVIRSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEVEGAVANDLPNHVPEDVKQ 443 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVYLNG- 414 ER+ R M LQQ ISA++LQEK+G+ ++V++DE+D E AI RS ADAPEIDG VY++ Sbjct: 444 ERYERLMTLQQDISAQKLQEKIGKTLMVLVDEIDREEGVAICRSYADAPEIDGHVYVDDI 503 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 + +VK G L V ++ A EYDL+ Sbjct: 504 DAHVKVGQFLTVTIDDASEYDLFA 527 >UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Cystobacterineae RepID=RIMO_MYXXD Length = 476 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 173/455 (38%), Positives = 266/455 (58%), Gaps = 26/455 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M TP + ++LGCPKN VDSE +L LR GY +V DA +++VNTC FI A Sbjct: 1 METTTP-KSLYMMTLGCPKNRVDSEVMLGTLRHRGYTLVQEASDAQVIVVNTCAFIGPAK 59 Query: 61 QESLEAIGEALNENG-----KVIVTGCLGAKEDQIR-EVHPKVLEITGPHSYEQVLEHVH 114 QES+++I E ++VTGCL + + + P+V G +Y Q+ + + Sbjct: 60 QESVDSILEMAELKKSGACKTLVVTGCLSQRYGEELSKEMPEVDHFLGTSAYAQIGDLLA 119 Query: 115 HYVPKPKHNP---FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + P ++ + P++ AYLKISEGC++ C FCIIP++RG SRPI Sbjct: 120 AEASPRQVIPDPDYIHDANTPRINSMPKYTAYLKISEGCDNACAFCIIPTLRGGQRSRPI 179 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 ++++EAK+L D+GV+E+ +++QD +AYG D+ R + L + L ++ + Sbjct: 180 DDIVAEAKQLADSGVQELNLVAQDLTAYGHDLPGRPK----------LHDLLKALVQVDV 229 Query: 232 -WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RLHY YP D++I +MA E KI YLD+P+QH S ++L MKR + + + Sbjct: 230 KWIRLHYAYPRIFPDELIEVMASEPKIARYLDMPVQHVSDKLLLSMKRGRNSEFLKGLLT 289 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + RE P L +R++ IVG PGETEEDF+ML +F+K R +R+G F+YS EG A LPD Sbjct: 290 KLRERVPGLVMRTSLIVGLPGETEEDFEMLKEFVKTQRFERLGVFQYSDEEGTAAYDLPD 349 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEI 406 +VP+++ E RW M +Q++I+ E+ ++ VG+ + V+++ E +GR AP+I Sbjct: 350 KVPQKLIERRWREVMAIQKRINREQNKKLVGKRLEVLVEGPAPETEHLLVGRHQGQAPDI 409 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 DG VY+N + PG+I+ V+V A +YDL V Sbjct: 410 DGMVYIN-DGLAYPGEIVTVEVTEAHDYDLVARVV 443 >UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO n=26 Tax=Bacteria RepID=RIMO_ALKMQ Length = 446 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 167/447 (37%), Positives = 262/447 (58%), Gaps = 25/447 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + SLGC KNL+D+E +L L GY + + AD++IVNTCGFI++A +ES+ I E Sbjct: 5 VYVESLGCSKNLIDAEVMLGILNQYGYKLTNNEVKADVIIVNTCGFIEAAKEESINKIIE 64 Query: 70 A----LNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 ++ +IV GCLG + + E P+V I G Y ++++ +H + + Sbjct: 65 LGQLKKDKLKLLIVAGCLGERYQKDLLEELPEVDAIVGTGGYHEIVKVIHQTMKGQRIVE 124 Query: 125 FLS-----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 ++ T H AY+KIS+GC++ CT+CIIP +RG SR + ++ EA+ Sbjct: 125 IGDINRPYDETLPRIQTTASHSAYIKISDGCDNYCTYCIIPKLRGKYRSRKMENIIQEAQ 184 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L + GVKEI++I+QDT+ YG+D+ + +L ++LS++ W R+ Y Sbjct: 185 TLANNGVKEIILIAQDTTRYGIDLYDEY----------RLSALLDKLSEVEGIQWIRILY 234 Query: 238 VYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D++I + K+ Y+DIP+QH S +ILKLM R S + ++ I++ ++ P Sbjct: 235 CYPEMITDELIATIKNNDKVCKYIDIPIQHCSTKILKLMNRRTSKEEIVSLIEKLKKNVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + +R++ IVGFPGE+EEDF L F+++ + DR+G F YS EG A L +QVP E+K Sbjct: 295 NIVIRTSIIVGFPGESEEDFNELKAFIEDIKFDRLGVFTYSQEEGTPAAQLAEQVPSELK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAPEIDGAVYLNG 414 E R M+LQQ+IS + + +G+ I V+I+E ++ +GRS DAPEIDG VY+ Sbjct: 355 ESRQKILMELQQRISLNKNRLYIGQSIEVLIEEEIAEKTEYLGRSQGDAPEIDGIVYVKS 414 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + G I++VK+E+A EYDL G + Sbjct: 415 TVPLCVGQIVKVKIENALEYDLMGEGI 441 >UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Clostridiales RepID=RIMO_SYMTH Length = 485 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 177/450 (39%), Positives = 267/450 (59%), Gaps = 30/450 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+GF+SLGC KNLVD+E ++ LR GY + ++AD+++VNTCGFID+A QES++AI Sbjct: 20 KVGFISLGCAKNLVDTESMIGLLRNTGYQITNRAEEADVLVVNTCGFIDAAKQESVDAIL 79 Query: 69 EALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 EA + ++V GC+ + +++ P++ + G Y ++ E V + + Sbjct: 80 EAAQHKTRGRCQALVVAGCMVPRYGEELAREIPEIDALVGTADYPRIGEVVAGILAGQRV 139 Query: 123 NPFLS-----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + V TP + AYLKI+EGC+ C FC IP MRG SRPI ++ E Sbjct: 140 QQISDPDSITDWNFERVLATPGYTAYLKIAEGCDCACAFCSIPLMRGRHRSRPIESIVDE 199 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A+RL GV+E++VISQDT+ YG+D+ K + L +L+++ W R+ Sbjct: 200 ARRLAGMGVRELVVISQDTTYYGLDLYR----------KPMLARLLRELAQVDGIRWIRI 249 Query: 236 HYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY YP D++I ++ E K+L YLD+PLQH S R+L++M RP + + L +++ RE Sbjct: 250 HYSYPTRITDELIEVIVTEPKVLNYLDLPLQHGSNRVLRIMNRPANAEGYLRLVQKLRER 309 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LRSTFI G PGETEEDF++LLDFL+ D VG F YS EG A + Q+PEE Sbjct: 310 VPDICLRSTFIAGHPGETEEDFELLLDFLRACEFDHVGVFAYSQEEGTKAGQME-QLPEE 368 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVY 411 V+ R +R M++QQ+I+ R Q +VGRE+ V+++ +G +GR +P IDG V Sbjct: 369 VRLARRDRAMEVQQEIARRRNQLQVGRELEVLVEGRSPQGRGWFVGRCYGQSPGIDGVVL 428 Query: 412 L--NGETNVKPGDILRVKVEHADEYDLWGS 439 +KPGD+++V++ +YDL G Sbjct: 429 FRAPAGAELKPGDMVQVRITGVQDYDLLGE 458 >UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ61_9FIRM Length = 455 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 175/451 (38%), Positives = 265/451 (58%), Gaps = 27/451 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K GF+SLGC KNLVD+E +L L+ G ++ + +AD++IVNTC FI SA +ES+ I Sbjct: 1 MKAGFISLGCSKNLVDTEVMLGILKQHGIELTANPAEADILIVNTCAFIQSAKEESITTI 60 Query: 68 GEALNEN-----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 +IV GCLG + ++ + P+ I G ++ +++E V + + Sbjct: 61 LNMAEYKESGRCRSLIVAGCLGQRYKQELLDEIPEADAIIGTGAWGRIMEAVEETLKGHR 120 Query: 122 H-----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + L + TP + AY+KI+EGCN+RC FC IP +RGD SR I ++ Sbjct: 121 VVIAGKDEALYDENTPRITTTPSYTAYVKIAEGCNNRCAFCAIPYIRGDYRSRRIEDICD 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E + L + GV+E+++I+QD++ YG D+ + L ++ K+ W R Sbjct: 181 EVRHLTENGVREVVLIAQDSTEYGRDLYGAPK----------LSELLREIVKVPKLQWVR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 Y YP D++I +A E KI Y+D+PLQHA +L+ M+RP + + A IK+ RE Sbjct: 231 TLYSYPKYFSDELIETIASEPKICKYVDLPLQHAHDAVLRSMRRPDTQEEMRALIKKLRE 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P +T+RSTFIVGFPGET+ + L +F++E RLD+VG F YS EG A +P+QVPE Sbjct: 291 RIPGVTIRSTFIVGFPGETDAQYHTLRNFIEEMRLDKVGVFTYSREEGTPAYDMPNQVPE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAV 410 E+ +ER++ M LQ +IS + Q G+E+ V+++ DEE +GRS +APE+DG V Sbjct: 351 EIMQERYHDLMSLQCKISEQINQSLEGKELDVLVEGRDEEQPNISVGRSYREAPEVDGQV 410 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 Y+ +T+ KPGDI+RV+V YD+ G R+ Sbjct: 411 YVENDTDSKPGDIVRVRVLQGFTYDIVGERI 441 >UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacillus RepID=D2LS97_BACS4 Length = 516 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 120/459 (26%), Positives = 211/459 (45%), Gaps = 33/459 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + K + GC N DSE + L G++ + DDAD++++NTC ++A Sbjct: 66 MQAIGKGKKFLIRTYGCQMNEHDSENMAGILLNMGFESTSNSDDADVILLNTCAIRENAE 125 Query: 61 QESLEAIGEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEH 112 + IG V V GC+ +E ++I + H V I G H+ ++ Sbjct: 126 NKVFGEIGHLKTMKRERPELIVGVCGCMSQEESVVNRILQKHQHVDLIFGTHNIHRLPTL 185 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLV 167 + + + + + ++ PR ++ I GC+ CT+CI+P RG Sbjct: 186 LKNAIFNKEMVVEVWSKEGDIIENMPRARKGQIQGWVNIMYGCDKFCTYCIVPYTRGKER 245 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR +++ E + L G KEI ++ Q+ +AYG D+ + L +++ Sbjct: 246 SRRPEDIIEEVRHLARNGYKEITLLGQNVNAYGKDLVDMDYG---------LGDLMDEIR 296 Query: 228 KLGI-WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 K+ I R +P D +I ++A+G ++ ++ +P+Q + +LKLM R + + + Sbjct: 297 KIDIPRVRFTTSHPKDFDDHLIEVLAKGGNLVEHIHLPVQSGNSDVLKLMARKYTREEYV 356 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 K+ +E P + + IVGFP ET+ F+ L ++E D + YSP EG A Sbjct: 357 TLAKKIKEAIPHASFTTDIIVGFPNETDAQFEDTLSLVREMEYDSAYTYVYSPREGTPAA 416 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMAD 402 + D +P EVK+ER R L +ISAE+ + GR + V+++ ++ GR+ + Sbjct: 417 KMNDNIPMEVKKERLQRLNALVNEISAEKNKSYQGRVVEVLVEGESKKNPDILAGRTRTN 476 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V G + G+I+ VK+ A + L G V Sbjct: 477 R-----LVNFKGAKS-SIGEIVYVKITEAKSWSLDGHVV 509 >UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Clostridia RepID=MIAB_PELTS Length = 448 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 134/452 (29%), Positives = 217/452 (48%), Gaps = 36/452 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K + GC N DSE + L + GY + +D D++++NTC +A + Sbjct: 1 MKKYRIIVFGCQMNEHDSEVLAGILESMGYCQAGNSEDPDIILINTCCVRKTAENKVFSL 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 +G N N + V GC+ +E ++I+++ P V I G H+ Q+ E + + Sbjct: 61 LGRLRRQKAQNPNLIIGVCGCMPQQEGMAERIKQLFPHVDLIFGTHNVHQLPELIGKVIE 120 Query: 119 KPKHNPFL------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K + L E VK A++ I GCN+ CT+CI+P +RG SR Sbjct: 121 GQKQVLEIWPGYGGELREELPVKRKEGVRAWVTIMYGCNNFCTYCIVPYVRGREKSRSPE 180 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 V E RL G KE++++ Q+ ++YG D+ VKT SL E L + Sbjct: 181 AVYEEVARLAGEGFKEVILLGQNVNSYGKDLG----------VKTDFASLLESLENIDGI 230 Query: 233 TRLHYV--YPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ Y+ +P ++ +A K + + +P+Q S RILK M R + + + I+ Sbjct: 231 DRIRYMTSHPRDFSLRLVEAIAASKKVCEHFHLPVQAGSNRILKKMNRGYTREEYVDLIR 290 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + + P T+ + +VGFPGET+EDF LD ++E R D F Y+ G A +PD Sbjct: 291 YIKSLIPHATVTTDIMVGFPGETDEDFNDTLDLVREIRFDSAYTFVYNIRPGTPAAEMPD 350 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEI 406 QV E VK+ER ++LQ +IS ER +E+VG+ V+++ + G GR+ + Sbjct: 351 QVAENVKKERIQALIKLQNKISLERNEEEVGQTQEVLVEGEKDRGSGFIYGRNRGNKT-- 408 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 V +G+ ++ G ++ V V A L G Sbjct: 409 ---VIFSGDPSL-VGKVVPVTVTGARLAHLTG 436 >UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridia RepID=B9MJU1_ANATD Length = 471 Score = 479 bits (1233), Expect = e-134, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 223/454 (49%), Gaps = 34/454 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 K V+ GC N+ DSE++ L GY + +AD++I NTC + A Sbjct: 34 KNKKYHIVTYGCQMNVHDSEKLAGMLNAMGYIETENIQEADLIIFNTCSVREHAESRVYG 93 Query: 66 AIG-----EALNENGKVIVTGCLGAK---EDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 IG + + V V GC+ + ++ ++ P + I G S + + ++ + Sbjct: 94 NIGPLKRLKEKKPDLIVGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQLLYTAI 153 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + K +S + V+ P A++ I GCN+ C++CI+P +RG SR Sbjct: 154 TEKKTVIEVSEDEDVVVEGIPTARRQGVSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPE 213 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 E++ E ++L G+KE+ ++ Q+ ++YG D+ + + L E+++++ Sbjct: 214 EIIYEIEQLAQNGIKEVTLLGQNVNSYGKDLGNSI----------TFPKLLEKVNEIKGI 263 Query: 233 TRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ +V +P D++I M + K+ ++ +P+Q S RILK M R + + L ++ Sbjct: 264 ERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLVE 323 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + + P++ + + IVGFPGET+EDF+ LD ++ D F YS G A +P+ Sbjct: 324 KLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVEFDSAYTFIYSKRRGTPAEKMPN 383 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI--GRSMADAPEID 407 QVP+++K +R+ R ++L ++I+ ++ ++ +G+ ++ID + + GR+ + Sbjct: 384 QVPDDIKYQRFQRLVKLVEEIALKKNRQMLGKTYEILIDSHSKRNNLLAGRTRTNK---- 439 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + VK+ A E+ L+G + Sbjct: 440 -VVNVKCSEEFMF-KFVNVKIFEAAEHWLYGEVI 471 >UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Firmicutes RepID=MIAB_NATTJ Length = 451 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 121/452 (26%), Positives = 216/452 (47%), Gaps = 35/452 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K ++ GC N DSE + L G++ S ++AD++I+NTC + A Q+ L I Sbjct: 10 KKFYTLTFGCQMNEHDSEVLAGMLDQMGFEKAASEEEADLLIINTCAVREKAEQKVLGKI 69 Query: 68 GEAL-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + K+ + GC+ +E ++I V I G H+ + + + H + K Sbjct: 70 GTLRYLKENKPDMKIAIGGCMVQQEHVANKIYRDFTHVDIIFGTHNINRFPQLLEHVMQK 129 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K +S Q + P A++ IS GC++ C +CI+P +RG SR + Sbjct: 130 GKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVRGQQRSRDPEHI 189 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 E ++L G+KEI ++ Q+ ++YG D+ S +L E+LSK+ R Sbjct: 190 KYEVEKLAKEGLKEITLLGQNVNSYGKDLDQNI----------SFTNLLEELSKIEGIER 239 Query: 235 LHYV--YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + ++ +P ++I + E KI + +P+Q S +ILK M R + + + + Sbjct: 240 IRFMTSHPKDFDKELITTLKESNKICEHFHLPVQAGSNKILKKMGRGYTREHYVDIVNDI 299 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P ++ + IVG+PGE EEDFQ LD ++ + D F YS G A + +QV Sbjct: 300 RAELPNASITTDIIVGYPGEEEEDFQETLDLVQNVKFDSAFTFVYSKRSGTPAAEMAEQV 359 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDG 408 E+ K+ R + + +QQ+IS +R ++ ++++ V + GR+ D Sbjct: 360 DEQTKKGRIQKLISVQQEISEQRNKDLENTVQRILVEGVSKNNEDMLSGRTRT-----DK 414 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ G+ + G+++ VK+ ++L+G Sbjct: 415 LVHFPGDKEL-IGELVDVKITRGHSWNLYGEI 445 >UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Clostridia RepID=MIAB_SYMTH Length = 470 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 123/457 (26%), Positives = 214/457 (46%), Gaps = 26/457 (5%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 P+P++ + GC N DSE + L GY DDAD+++ NTC +SAV+ Sbjct: 15 HGKPEPRVHIETFGCQMNEHDSEIMYGILAQMGYVKAQGPDDADLLLFNTCAVRESAVEH 74 Query: 63 SLEAIGEAL-----NENGKVIVTGCLGAKEDQ---IREVHPKVLEITGPHSYEQVLEHVH 114 + IG+ N + + V GC+ E Q I+ + P + I G H+ ++ E V Sbjct: 75 AFGRIGQLKPLKYTNPDLIIGVCGCVPQVEGQVERIKRMFPYLDLIFGTHNIHRLPELVE 134 Query: 115 HYVPKPKHNPFL------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + + A++ I GC+ CT+CI+P+ RG S Sbjct: 135 RARSERETVVDVWESMGDDFPDILPAAREGDLKAWVTIMYGCDKHCTYCIVPTTRGKERS 194 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP +L+E + L G KEI ++ Q+ +AYG D+ R G G ++ L ++ S Sbjct: 195 RPYEVILAEVQELARQGFKEITLLGQNVNAYGKDLYGRHG--EGAFDFGDLIELIDRNSP 252 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 R +P ++ +A K+ + +P+Q S +L+ MKR + + L Sbjct: 253 GIERIRFTTNHPKDFTRKMVEQIARAEKVCEWFHLPVQSGSDSVLRRMKRSYNRKQYLRL 312 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + RE+ P+ + + IVGFPGETEE+FQ L ++E + D F YS G A + Sbjct: 313 VGWIRELIPDAVITTDIIVGFPGETEEEFQETLSLVEEVQYDAAFMFMYSERAGTPAAQM 372 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAP 404 D++ K+ER R M++Q +I+ + + +VG+ ++++ +D+ G + + Sbjct: 373 EDRLSVPEKKERLQRLMEVQNRIARAKNEARVGKVYDILVEGLDKGKPDVVFGWTRGNI- 431 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V G+ +++ G I+ V++ A + L G V Sbjct: 432 ----LVTFPGDESLR-GRIVPVRITRAGTWTLEGELV 463 >UniRef50_C4Z0L1 2-alkenal reductase n=16 Tax=Bacteria RepID=C4Z0L1_EUBE2 Length = 450 Score = 476 bits (1225), Expect = e-133, Method: Composition-based stats. Identities = 161/454 (35%), Positives = 252/454 (55%), Gaps = 26/454 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M +V KI F SLGC KNLVD+E +L L +G++ AD+++VNTC FI A Sbjct: 1 MQEVMQYMKIMFASLGCDKNLVDTENMLGILNDKGFEFTDDETQADVIVVNTCCFIGDAK 60 Query: 61 QESLEAIGEALNEN-----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVH 114 QES+ I E +IVTGCL + +I + P+V G SY+++ E V Sbjct: 61 QESINTILEMAQHKEDAVCKALIVTGCLAHRYKDEIIKEIPEVDAFLGTTSYDKIAEVVT 120 Query: 115 HYVPKPKHNPFLS-----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + N +V E+ + TP ++ YLKI+EGC+ CT+CIIP +RG+ S Sbjct: 121 SVLEGKGFNVVDDANRLPIVKEKRIITTPGYFEYLKIAEGCDKHCTYCIIPKVRGNFRSY 180 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 P+ ++ +AK LV G KE+++++Q+T+ YG D+ K S+ L +L+K+ Sbjct: 181 PVEYLVEQAKHLVHNGAKELILVAQETTLYGTDLYG----------KKSLPMLIHELAKI 230 Query: 230 G--IWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W R+ Y YP D++I + E K+ YLD+P+QHAS +LK M R L Sbjct: 231 EDLKWIRIQYCYPEEINDELIEAIKNEPKVCHYLDMPIQHASDNVLKRMGRKTDKQELLD 290 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + R+ P++ LR+T I GFPGET+ D + +++F+ E DR+G F YS E A Sbjct: 291 IVAKLRKEIPDIALRTTLIAGFPGETQADHEEVMEFIDEIEFDRLGVFTYSREEDTPAAT 350 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAP 404 +PDQ+ +++ + + M LQQ+IS ++ + VG+ I V+++ ++ +GRS DAP Sbjct: 351 MPDQIDQDIMDTWRDELMALQQEISIDKSAQMVGKTIDVMVEGYIAEDNTYVGRSYKDAP 410 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 +DG V+ + + GD + VK+ + EYDL G Sbjct: 411 NVDGMVFFECDRELMSGDFVSVKITSSTEYDLMG 444 >UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIQ8_9FIRM Length = 444 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 127/448 (28%), Positives = 219/448 (48%), Gaps = 34/448 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG-- 68 + GC N D+ER++ +LRT GY+ S ++AD++++NTC ++A IG Sbjct: 13 YLLVYGCQMNQSDAERMMGQLRTIGYERTESMEEADLILINTCCVRETAEDRVYGKIGEI 72 Query: 69 -EALNENGKVI--VTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 EN ++I +TGC+ KE + + P + + G + ++ V + H Sbjct: 73 KRLKRENPELIFGITGCMAQKEGDALIKRAPHIDFVLGTNKVHELTHVVQEIQAEHGHVV 132 Query: 125 FLSLVPEQGVKLTPRHYA-----YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + L + P A ++ I GCN+ CT+CI+P +RG SR +++ E + Sbjct: 133 DVQLGETELPDDVPVARAGSLSAWVPIMYGCNNFCTYCIVPYVRGRERSRLPEDIVHEVE 192 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 V G +E+ ++ Q+ ++YG D K L + + K+ R Sbjct: 193 EAVKNGYEEVTLLGQNVNSYGKDHK-----------LADFADLLKMVDKVPGIRRVRFMT 241 Query: 238 VYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +P D VI + + + ++ +P+Q+ S RILK M R +V+ +++ R P Sbjct: 242 SHPKDLSDKVIAAIRDGEHLCEHIHLPVQYGSNRILKAMNRVYTVESYRDLVRRIRAAIP 301 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +++L + IVGFPGET+EDFQ +LDFL+E R D F YS G A + +QV E VK Sbjct: 302 DVSLTTDLIVGFPGETDEDFQQMLDFLREIRYDSAYTFIYSKRSGTPAATMENQVDESVK 361 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLN 413 +ER N M +Q +IS ++ +G+ + ++++ + +GR+ + + L Sbjct: 362 KERLNALMAVQNEISLAINEKLLGKTLEIMVEGPSKNEPSVWMGRTRTN------KIVLF 415 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 KPGD + V++ H + L G RV Sbjct: 416 AHAGEKPGDFIDVRITHPQTWVLKGERV 443 >UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Bacteria RepID=RIMO_HELMI Length = 460 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 175/449 (38%), Positives = 243/449 (54%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI SLGC KN VD+E ++ LR GY++ +DA +++VNTCGFI A +ES++ I Sbjct: 18 MKIHITSLGCAKNRVDTEVMMGLLREAGYELTQREEDAHVLLVNTCGFILPAKEESIQTI 77 Query: 68 GEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E ++V GCL ++ P+V GP +V V + + Sbjct: 78 LELARYKETGRCRALLVAGCLPQGYAGELAAELPEVDAFFGPGDVPRVTSIVAEVLRGKR 137 Query: 122 HNP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 FL V TP HYAY+KI++GC++RC +C IP++RG SR ++ Sbjct: 138 SLEVGKPDFLYDHTMPRVLSTPFHYAYVKIADGCDNRCGYCAIPNLRGRFRSRSEESIVE 197 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E + LVD G++E L+I+QDT+ YGVD + L +L+ + W R Sbjct: 198 ETRSLVDRGIQEALLIAQDTTCYGVDRYGEF----------RLAQLIGKLASIDGLRWIR 247 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y YP ++I MA E K+ Y+D+PLQHA +L+ M R VD I+ RE Sbjct: 248 LMYCYPSHFTPELIEAMAAEPKVCRYVDLPLQHADDELLRSMNRHAGVDEIRRLIRTLRE 307 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P L +R++FIVG PGETEE FQ LLDFL E R DRVG F YS E A L DQVPE Sbjct: 308 RLPGLAIRTSFIVGLPGETEEKFQRLLDFLAEMRFDRVGIFTYSREENTPAGKLADQVPE 367 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-DEEGAIGRSMADAPEIDGAVYL 412 EVKEER++R M LQQ+IS QE +G+ + V+++E GRS +APE+DG + Sbjct: 368 EVKEERYHRAMVLQQEISLSIQQEWIGKTLEVLVEEEVAPGLYRGRSEREAPEVDGHIEF 427 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G + G+ V++ A YDL G + Sbjct: 428 KGRHRM-IGEWANVRITAASHYDLMGEAI 455 >UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Bdellovibrio bacteriovorus RepID=RIMO_BDEBA Length = 457 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 177/460 (38%), Positives = 257/460 (55%), Gaps = 25/460 (5%) Query: 1 MSKVTPQ-PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 M + T Q K+ F+SLGCPKNLVDSE + L +GY+VV D AD VIVNTCGFI+ + Sbjct: 1 MKQETAQNKKVHFISLGCPKNLVDSEIMAGTLMKDGYEVVGEADQADTVIVNTCGFIEDS 60 Query: 60 VQESLEAIGEALNEN-----GKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHV 113 +ES++ I + + KV+V GCL + + E P+ G ++ + + + Sbjct: 61 KKESIQRILDMSDLKQEGKIKKVVVAGCLTQRYKDDLVEGLPEADLFVGSGEFQNIAKIL 120 Query: 114 HHYVPKPKHNPFLSLVPE------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + K F +L V P H AYLKISEGC RC FC IP +RG+L Sbjct: 121 KNSDEGEKQKTFFNLPTYLQEEATPRVNSQPGHRAYLKISEGCMKRCAFCAIPLIRGNLQ 180 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I +++EAK LV GVKE+++IS D + YG D++ + P V L + L Sbjct: 181 SRSIDAIVAEAKLLVAGGVKELIIISHDFTDYGFDIRRKDPTRKESP-----VELLKALD 235 Query: 228 KLGI--WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 ++ W RL Y+YP +++ ++ KI+ Y D+PLQH + ++LK M R + D Sbjct: 236 QVEGLQWIRLMYLYPDGITQEMVQVIKNSTKIVKYFDMPLQHVNDQVLKSMNRKMTRDEI 295 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 + RE PE +R+ FIVGFPGET+E F+ LL+F+ E + DRVGCFKYSP E Sbjct: 296 ETALMNIREHLPEAVIRTQFIVGFPGETQEQFEELLNFVAEQQFDRVGCFKYSPEENTPG 355 Query: 345 NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMA 401 + +Q+ EE K+ R + M++QQ IS E+ + VG+ + VI++ EE GR Sbjct: 356 GRMENQIDEETKQYRHDALMEVQQNISREKHSDFVGKTLQVIVEGFSEETDLLLQGRFWG 415 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 AP+IDG V +N + + GD+++V + EYDL G V Sbjct: 416 QAPDIDGVVLIN-DGQAQVGDMVKVHITDNMEYDLIGEIV 454 >UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF04_CARHZ Length = 434 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 127/447 (28%), Positives = 209/447 (46%), Gaps = 27/447 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F +LGC N ++E + +GY++V D AD+ ++NTC + ++S + Sbjct: 1 MKKVAFYTLGCKVNQYETEALKGAFLEKGYEIVDFSDYADIYVINTCTVTHLSDRKSRQM 60 Query: 67 IGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I +A+ +N + +V GC + P+V + G +++E V + + Sbjct: 61 IRKAVQKNPRAVVAAVGCYAQVAPEEILKIPEVNLVLGTVHKNRLVELVEKVLRERTKIN 120 Query: 125 FLSLVPE-------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++ E + A++KI EGCN C +CIIP RG L SRP+ +V++E Sbjct: 121 AVASFEELLEFEEMPLKLAPGKARAFVKIQEGCNSYCAYCIIPYARGPLRSRPLEDVVAE 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRL 235 K+L +G EI++ T AYG + + + L +L K+ RL Sbjct: 181 VKKLCQSGFSEIVLTGIHTGAYGQE----------KQDLPKLADLVAELFKIPELKRLRL 230 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P +++ ++A K +L +PLQ ILK M+R + L I+ RE Sbjct: 231 SSIEPQDFTVELLDVLANSPKFCRHLHLPLQSGDDDILKAMRRKYTSYEYLRLIETIRER 290 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ L S IVGFPGETEE F + +K+ + FKYSP G A +P Q+PE Sbjct: 291 IPDIALTSDVIVGFPGETEEQFLNTYNLVKKVGFMDIHVFKYSPRAGTPAAKMPGQIPER 350 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 KE R + L++++ + +G+ + VI +E D EG + V +G Sbjct: 351 EKERRSLLLLNLKEELFKNYASKFLGKILEVIPEEQDTEGF----WEGHSDNYLRVKFSG 406 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 N+K G+I VK+ E + G V Sbjct: 407 N-NIKRGEIYPVKITEMKEGYVSGELV 432 >UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR79_9FIRM Length = 478 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 128/460 (27%), Positives = 215/460 (46%), Gaps = 34/460 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 + +V+ K + GC N D+ERI +L GY DDAD+VI+NTC +A Sbjct: 33 LKEVSFDKKYFIETYGCQMNESDTERISGQLEELGYVPADILDDADVVILNTCSIRQNAE 92 Query: 61 QESLEAIGEALNENGK-----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVH 114 ++ IGE GK + + GC+ + ++ E P + + GP+ + + V Sbjct: 93 EKVYGKIGEVKKLKGKKPGVLLGIAGCMAQENKGKLIERMPVIDFVIGPYHIHDLKDIVS 152 Query: 115 HYVPKPKHNPFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + H + P + R +A++ I +GCN CT+CI+P +RG Sbjct: 153 RRGAEGSHVVMTQMNPNRVNDYSELHSVRKSRIFAWVPIMQGCNKFCTYCIVPYVRGRET 212 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I ++ E ++L G KEI ++ Q+ ++YG+D T SL + Sbjct: 213 SRTIDDICREIEKLAREGYKEITLLGQNVNSYGLDFHDG----------TDFGSLIHAID 262 Query: 228 KLGIWTRLHYV--YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 K+ R+ Y+ +P ++ MA K++ ++ +P+QH + IL+ M R +++R Sbjct: 263 KIDGIKRVRYMTSHPKDMTFGMVDAMAASPKVVRHMHLPVQHGANEILRRMNRGYTIERF 322 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 +K RE P +T+ + I GFPGETE+ + L LKE + D F YSP G A Sbjct: 323 KELLKYVREKMPGITVTTDLITGFPGETEDMHEETLTLLKEMKFDSAYTFIYSPRRGTPA 382 Query: 345 NALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMA 401 + +QV + V R M ++ +IS +E G+ VI + + + GR+ Sbjct: 383 ARMTNQVSDAVCHRRLQEIMNVENEISLSLNKEMEGKVYTVIAEGETKQNPDNWFGRTSG 442 Query: 402 DAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + V ++ GDIL+V+V+ A + L G+ V Sbjct: 443 NK-----MVIFPKAGSLSVGDILKVRVDTAQTWILKGTIV 477 >UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=MIAB_DICT6 Length = 440 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 119/449 (26%), Positives = 210/449 (46%), Gaps = 28/449 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 PK ++ GC N DSE++ L GY ++AD++++NTC + A ++ Sbjct: 1 MPKYYIITYGCQMNKSDSEKVAGILENLGYTPSEKMEEADIILLNTCSVRERAEEKVFGK 60 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +GE + + + GC+ + ++++ E P V + G + + ++ + + K Sbjct: 61 LGELRKLKKRNQNLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKILESLDGKK 120 Query: 121 KH-----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K P V + +K + A++ I GCN+ CT+CI+P +RG SR E++ Sbjct: 121 KVVLAEDIPSPQDVDFRVIKRENKFQAWIPIIYGCNNFCTYCIVPYLRGREKSRDPEEII 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWT 233 E + L GV E+ ++ Q+ +YG D+ + + L ++ ++ Sbjct: 181 REVEYLASQGVVEVTLLGQNVDSYGKDLGN-----------VDLADLLVEIHRIPRIKRI 229 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P D +I ++A K+ P+ +PLQ S RIL+ M R + A I++ R Sbjct: 230 RFLTSHPRDVSDKLIRVVATHPKVCPHWHLPLQAGSDRILRRMGRGYTYSEYKALIEKIR 289 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P+ + + IVGFPGE EEDF L+E + D V YS G A D +P Sbjct: 290 AEIPKASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAANYEDLIP 349 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 E K+ ++ LQ++I E+ +VG+E +V+ +EV+ + R ++ E V+ Sbjct: 350 YETKKRWFDELENLQRKIIYEKNLSRVGKEEIVLAEEVNPKNP--RELSGRTENYRLVFF 407 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 E + G L VK+ A + L G + Sbjct: 408 EAEKEL-IGKFLLVKITEARLWSLKGEVI 435 >UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Bacillales RepID=C5D4T7_GEOSW Length = 451 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 140/445 (31%), Positives = 215/445 (48%), Gaps = 19/445 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + F +LGC N ++E I + GY+ AD+ ++NTC ++ ++S + Sbjct: 1 MPTVAFHTLGCKVNHYETEAIWQLFKKAGYERKDFDSRADVYVINTCTVTNTGDKKSRQV 60 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I A N + V VTGC P V + G ++LE++ + + + Sbjct: 61 IRRAIRRNPDAVVCVTGCYAQTSPAEVMAIPGVDIVIGTQDRGKILEYIERFQRERQPIN 120 Query: 125 FLS-------LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 +S + T R A LKI EGCN+ CTFCIIP RG + SR EV+ + Sbjct: 121 GVSNIMKTRVFEEMDVPEFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQ 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 A++LVDAG KEI++ T YG D+K + + L EQ+ L R+ Sbjct: 181 AQQLVDAGYKEIVLTGIHTGGYGTDLKDYSFA-------ALLRDLDEQVVGLK-RLRISS 232 Query: 238 VYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 + D++I ++ KI+ +L IPLQ S +LK M+R +V+ R+++ RE+ P Sbjct: 233 IEASQITDEIIEVLQRSDKIVRHLHIPLQSGSNTVLKRMRRKYTVEFFAERLQRLREVFP 292 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 EL + S IVGFPGETEE+F F++E R + F YS G A +P+QV EEVK Sbjct: 293 ELAITSDVIVGFPGETEEEFMETYHFIREQRFSELHVFPYSKRTGTPAARMPNQVDEEVK 352 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 ER +R + L Q++ E + G+ + VI +E D+E + V Sbjct: 353 NERVHRLIALSDQLAKEYASQFEGQVLEVIPEERDKENPESGLYIGYTDNYLKVKFPATE 412 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 + G+I++VK+ A G V Sbjct: 413 EM-VGEIVKVKITKAGYPYNEGEFV 436 >UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicutes RepID=B7GKD2_ANOFW Length = 467 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 138/451 (30%), Positives = 215/451 (47%), Gaps = 19/451 (4%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 +S+V P + F +LGC N ++E I + GY+ AD+ ++NTC ++ Sbjct: 12 LSEVIYMPTVAFHTLGCKVNHYETEAIWQLFKQAGYERKDFESHADVYVINTCTVTNTGD 71 Query: 61 QESLEAIGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 ++S + I A N + V VTGC P V + G ++LE++ + Sbjct: 72 KKSRQVIRRAVRRNPDAVVCVTGCYAQTSPAEVMAIPGVDIVIGTQDRGKILEYIEQFKQ 131 Query: 119 KPKHNPFLSL-------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + + T R A LKI EGCN+ CTFCIIP RG + SR Sbjct: 132 QRQPINGVRNIMKTRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDP 191 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 EV+ +A++LVDAG KEI++ T YG D+K + + EQ+ L Sbjct: 192 KEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKDYNFAM-------LLRDMDEQVKGLK- 243 Query: 232 WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R+ + D+VI ++ + KI+ +L IPLQ S +LK M+R + + R+ + Sbjct: 244 RLRISSIEASQITDEVIDVLRQSDKIVRHLHIPLQSGSNAVLKRMRRKYTTEFFAERLAR 303 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE+ P+L + S IVGFPGETEE+F +F++E R + F YS G A +PDQ Sbjct: 304 LREVFPDLAVTSDVIVGFPGETEEEFMETYEFIREQRFSELHVFPYSKRTGTPAARMPDQ 363 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV 410 V EEVK ER +R + L Q++ E + G+ + VI +E+ +E + V Sbjct: 364 VDEEVKNERVHRLITLSDQLAKEYASKFEGQVLEVIPEELYKEDPASGLYVGYTDNYLKV 423 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + G +++VK+ A G V Sbjct: 424 KFPATEEM-VGQLVKVKITKAGYPYNEGEFV 453 >UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RIMO_CARHZ Length = 438 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 159/446 (35%), Positives = 260/446 (58%), Gaps = 22/446 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K +SLGC KN DSE I+ L ++GY + +++D++IVNTCGFI +A++ES+E I Sbjct: 1 MKYFILSLGCTKNQADSEVIMGILESKGYVRSLNPEESDLLIVNTCGFIAAAIEESIEEI 60 Query: 68 G---EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK-- 121 K++V GCL +E ++ + P+V P + + + K Sbjct: 61 LNLVHLKKPGQKILVAGCLVQREGKELAKHLPEVDLFFTPREINNLDKLLADLGENNKLV 120 Query: 122 -HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P + ++ + Y Y+KI++GC++RCT+C IP++RG SRP+ ++L E K Sbjct: 121 LSEPGFLNLEKKPRAKSNEVYRYIKIADGCDNRCTYCTIPAIRGKYTSRPLDDILEEIKD 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 + G+KEI++++QDT+AYG+D+ +V L ++ + W RL Y+ Sbjct: 181 TLKQGIKEIILVAQDTTAYGIDLYGEFK----------LVELLRKIGSIKGNFWVRLMYL 230 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP ++I + E K++ Y+D+PLQH P ILK M R GS + ++ +++ R+ P+ Sbjct: 231 YPDKITPELINEIKENPKVIKYVDVPLQHIHPEILKKMGRKGSSEEIISTLERLRKEIPD 290 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 +T+R+TFIVGFPGETEE F LLDF+K+ + +R+G F Y +G A + Q+P++VKE Sbjct: 291 ITIRTTFIVGFPGETEEQFNYLLDFVKKFKFNRLGAFPYYREKGTPAAKMKGQIPKKVKE 350 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDE--VDEEGAIGRSMADAPEIDGAVYLNGE 415 +R+ + M++QQ+IS + VG++I VI+++ E +GR+ DAPEIDG + + E Sbjct: 351 QRYEKLMEVQQEISLNLNKALVGKKIPVIVEKKIRGENLYLGRTYMDAPEIDGIIEIKAE 410 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 +K G I+ V + D YDL G + Sbjct: 411 KRLKKGQIINVLITDYDIYDLKGEFI 436 >UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostridia RepID=B0KA65_THEP3 Length = 467 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 109/446 (24%), Positives = 207/446 (46%), Gaps = 25/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + F +LGC N ++E + + GY+VV + AD+ ++NTC + + +S + Sbjct: 32 KKTVAFYTLGCKVNQYETEVMAELFKKAGYEVVDFNEKADVYVINTCTVTNRSDMKSRQE 91 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I +A N + V+ GC + P+V G + ++++E V + K + Sbjct: 92 IRKARKKNPDALVVAVGCYVQVSPEEAFSLPEVDIAIGTKNKDKIVELVEEFTQKNQKLS 151 Query: 125 FLSL-------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++ T R AY+KI +GCN CT+CIIP RG + SR +VL E Sbjct: 152 VVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYCIIPYARGPVRSRDPKKVLDE 211 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 KR D+G KEI++ ++YG D+K+ ++ + + + ++ RL Sbjct: 212 VKRFADSGYKEIVLTGIHIASYGKDLKNIG-----------LLDIIKMIHEIDGIKRIRL 260 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P ++ + +A K+ + + LQ LK M R + + I + RE Sbjct: 261 SSIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREY 320 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 ++ + + +VGFPGETEE+F F++E ++ FKYS +G A P+QV Sbjct: 321 IKDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQVANH 380 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 +KE+R + ++L + + ++ +G+ + V+ ++ + G + ++ + G Sbjct: 381 IKEDRSKKLIELSNRCEYKFMESFIGKTLEVLFEQPVKN-MEGYVE-GLTDNYLSIAVKG 438 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + + +I VK++ + L G Sbjct: 439 DIKLLRNEIFPVKIKEIKDNFLIGEI 464 >UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Aquificales RepID=MIAB_SULSY Length = 437 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 128/451 (28%), Positives = 219/451 (48%), Gaps = 34/451 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N+ DSE++ L+T GY ++++AD+++VNTC + Q+ L A+ Sbjct: 1 MKFYIKTFGCQMNVNDSEKMAGILQTLGYTPTENWEEADVILVNTCSVREKPDQKVLSAL 60 Query: 68 GEAL-----NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 GE N N + V GCL + +I + P + + G + + + K Sbjct: 61 GEFKKVKKHNPNAVIGVCGCLAQRAGYEIYQKAPFIDIVFGTTNIHHLPNLLEEAKSGNK 120 Query: 122 HNPFLSLVPE-------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 L + E ++ A++ + GC+ +CT+CI+P+ RG SR IG++ Sbjct: 121 AIEILEEIDENENLLDQFPTVRENKYTAFVTVIRGCDKKCTYCIVPTTRGRERSRRIGDI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + LV+ GVKEI +I Q+ +AYG D L + ++++ R Sbjct: 181 LREVQYLVEDGVKEIHLIGQNVTAYGKDFGDVK-----------FWELLKAVAEVDGVER 229 Query: 235 LHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P +D I +MA+ +I L +P+Q S RIL+ M R + L +I+ Sbjct: 230 IRFTTGHPRDLDEDTIKVMADLPQICEALHLPIQAGSDRILQAMDRGYTQKEYLQKIELL 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 ++ P + L + IVGFPGET ED+ + +KE D+V FKYSP G A LP Sbjct: 290 KKYIPNIALSTDIIVGFPGETYEDYLETVKVIKEVEYDQVFAFKYSPRPGTPAADLPMTE 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD-EEGAIGRSMADAPEIDGAV 410 E +R N + LQ+ I+ ++ E + + ++++E++ E +GR+ + V Sbjct: 350 SPEELSKRLNDLINLQKDITFKKNLEYQDKIVEILVEEINQENKLVGRTRTNK-----LV 404 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 Y G G ++ VK+E + + L GS + Sbjct: 405 YAEGSPEYL-GKLVNVKIEKVNRFSLEGSII 434 >UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Desulfuromonadales RepID=RIMO_PELPD Length = 450 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 168/456 (36%), Positives = 255/456 (55%), Gaps = 29/456 (6%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 + T + K+ VSLGC KNLVD+E +L L + Y++ +AD++IVNTC FI A QE Sbjct: 2 ESTEKQKVSMVSLGCSKNLVDAEVMLGLLARQEYEITTDEREADIIIVNTCSFIKEAKQE 61 Query: 63 SLEAIGEALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY 116 S++AI + +IV+GCL + +++ P+V G Y ++ E + Sbjct: 62 SIDAILDLAERKNDGRCHTLIVSGCLPQRYQEELARELPEVDIFIGTGDYPRIAEILAEK 121 Query: 117 VPKPKHNPFLSLVPE------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + ++ + +P ++YLKI EGC++RC++CIIP +RG SRP Sbjct: 122 SGTDEQLCYIGDPDFVFDETLPRLNSSPAWFSYLKIGEGCSNRCSYCIIPKLRGPYRSRP 181 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 + +++EA++L GVKE+ +ISQD + YG D++ T++ +L +L ++ Sbjct: 182 LEALVAEAEQLASRGVKELNIISQDITRYGSDMEDG----------TTLETLLRRLVQID 231 Query: 231 I--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 W RL Y YP D +I L+ E KI YLDIPLQH S +LKLM+R + + Sbjct: 232 GIQWIRLLYAYPDGISDALIALIRDEPKICKYLDIPLQHISDPVLKLMRRRSNEQQIREL 291 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + + R P L LR++ IVGFPGET EDF L+ F+++AR DR+G F YS EG A + Sbjct: 292 LAKLRREIPTLALRTSLIVGFPGETMEDFTSLMQFVEQARFDRLGVFCYSREEGTPAATM 351 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAP 404 PDQV E VK ER + M++Q ++S +R +E +G VI++ EE GRS AP Sbjct: 352 PDQVSERVKRERHRKLMRIQARLSFKRNRELIGTTEQVIVEGYSEETELLLKGRSSRQAP 411 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 +IDG VY+ GDI+ +++ + +YDL G Sbjct: 412 DIDGQVYITA-GTADVGDIVALRITDSSDYDLIGEI 446 >UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=174 Tax=Actinobacteria (class) RepID=MIAB_MYCA1 Length = 715 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 129/449 (28%), Positives = 209/449 (46%), Gaps = 22/449 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD-ADMVIVNTCGFIDSAVQESLEA 66 + GC N+ DSER+ L GY + AD+V+ NTC ++A + Sbjct: 29 RTYQVRTYGCQMNVHDSERLAGLLEAAGYRRAAEGAEVADVVVFNTCAVRENADNKLYGN 88 Query: 67 I-----GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + N ++ V GCL K+ + + P V + G H+ + + Sbjct: 89 LSHLAPRKRSNPQMQIAVGGCLAQKDREAVLRRAPWVDVVFGTHNIGSLPTLLERARHNK 148 Query: 121 KHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 ++ +Q P A++ IS GCN+ CTFCI+PS+RG V R ++L Sbjct: 149 AAQVEIAEALQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRGKEVDRSPDDIL 208 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E + LV GV E+ ++ Q+ +AYGV + + L ++ R+ Sbjct: 209 AEVRSLVADGVLEVTLLGQNVNAYGVSFAD----PALPRDRGAFARLLRACGEIDGLERV 264 Query: 236 HYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + P+P DDVI MA+ + P L +PLQ S R+L+ M+R +R L I + R Sbjct: 265 RFTSPHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVR 324 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P + + IVGFPGETEEDF LD ++ AR F+YS G A L Q+P Sbjct: 325 AAMPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAELDGQIP 384 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIID--EVDEEGAIGRSMADAPEIDGAV 410 + V +ER+ R ++LQ+ IS + Q VG+ + +++ E ++ A R A + V Sbjct: 385 KAVVQERYERLVELQESISLQGNQALVGQTVELLVATGEGRKDSATARMSGRARD-GRLV 443 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGS 439 + + V+PGD++ + A + L Sbjct: 444 HFAADDRVRPGDLVTTVITGAAPHHLIAD 472 >UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIN5_RHOVA Length = 469 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 130/460 (28%), Positives = 205/460 (44%), Gaps = 35/460 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + P+ ++ + GC N+ DSER+ L G+ + +DAD+VI+NTC + A + Sbjct: 16 TANAPEKRVFIKTFGCQMNVYDSERMADALGAAGFVETGAPEDADLVILNTCHIREKAAE 75 Query: 62 ESLEAIGEAL----------NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLE 111 + +G N + V GC+ E + V I GP SY ++ E Sbjct: 76 KVFSELGRLRVLREARRQDGGGNLMIAVAGCVAQAEGEEIARRAAVDIIVGPQSYHRLPE 135 Query: 112 HVHHY--VPKPKHNPFLSLVPEQGVKLTPRHYA----YLKISEGCNHRCTFCIIPSMRGD 165 + P + P+ A +L + EGC+ CTFC++P RG Sbjct: 136 LIERRASTRGPVIETEFPAAEKFASLPAPKLRAAPSAFLTVQEGCDKFCTFCVVPYTRGA 195 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 SRP+ +++ EAKRL + GV+EI ++ Q+ +A+ ++ L Sbjct: 196 EYSRPVAQIIEEAKRLAERGVREITLLGQNVNAW--------AGEGPSGKTWTLPDLLAA 247 Query: 226 LSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVD 282 LS++ RL + +P D +I + K++PYL +P Q S RILK M R ++ Sbjct: 248 LSEVNGIARLRFTTSHPNDMSDALIAAHRDLPKLMPYLHLPFQSGSDRILKAMNRKHRME 307 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 L + + R+ P+L L + IVGFPGET+ DF+ + ++ + FKYSP G Sbjct: 308 DYLRIVHRLRDARPDLALSTDIIVGFPGETDADFEETMRMVERVHFAQAYSFKYSPRPGT 367 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID--EVDEEGAIGRSM 400 A QVPE+VK ER R L VGR + V+ + +E +GRS Sbjct: 368 PAADRAAQVPEDVKSERLARLQALLFAQQTAFNAAMVGRTLSVLWESRGRNEGQVVGRSP 427 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 P VY G+ + G I V++ A + L Sbjct: 428 YLQP-----VYAEGDPAL-IGHIADVEIVAASQNSLRAVI 461 >UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF18_BREBN Length = 448 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 167/456 (36%), Positives = 256/456 (56%), Gaps = 26/456 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 KV + K+ V+LGC KNLVDS+ + + +GY++V + ++A +VIVNTCGFID+A + Sbjct: 3 EKVGTREKVAIVTLGCEKNLVDSDMMAHLIDEKGYELVDNPEEATVVIVNTCGFIDAAKE 62 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHH 115 ES+ I E ++V GCL + + I P+V I G + + + Sbjct: 63 ESVNKILEMGELKESGKLKSLVVAGCLTQRYKEDILNEIPEVDGIVGTGDFMSITGIIEE 122 Query: 116 YVPKPKHN-----PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + F + + AY+KI+EGC++ CTFC IP MRG SR Sbjct: 123 SLEGKRPIFVGNPIFTYEDVVKRKVKQGTYTAYIKIAEGCDNACTFCSIPLMRGGFRSRT 182 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I ++ EA+ L GV E+ +I+QD++ YG D+ K + L +L+++ Sbjct: 183 IESIVEEARHLAAQGVVEVSLIAQDSTNYGTDIYD---------GKLMLPELLNRLAEVE 233 Query: 231 I--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 W RLHY YP D++I A K+ Y+D+PLQH+ ILK M+RPG A Sbjct: 234 GIEWIRLHYAYPGFFTDELIHTFATNPKVCKYVDMPLQHSEDHILKRMRRPGRQTDIRAL 293 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + + R P++ LR++ IVGFPGETEEDF+ L +F+K+ R DR+G F YS + A+ L Sbjct: 294 VAKIRAQVPDVALRTSLIVGFPGETEEDFERLSEFVKDIRFDRLGVFTYSNEDDTPASRL 353 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPE 405 PD V EEVKE+R N M++Q++++ +R VG+ + V+I+ + +GR+ DAPE Sbjct: 354 PDHVDEEVKEKRANMLMEIQREVAGDRNGRFVGQVLDVLIERYEGRNDIYVGRTQYDAPE 413 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 IDG V++ G + G +++VK+ H+ EYDL G V Sbjct: 414 IDGEVFVTGFKG-ELGTVVKVKITHSYEYDLAGEVV 448 >UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=11 Tax=Clostridiales RepID=MIAB_DESHY Length = 447 Score = 462 bits (1190), Expect = e-129, Method: Composition-based stats. Identities = 121/457 (26%), Positives = 216/457 (47%), Gaps = 34/457 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 MS K+ ++ GC + D++ + +GY + AD++IVNTC +SA Sbjct: 1 MSITKVPKKVVTLAYGCQMSERDADTLTEISSQKGYVRSQELEQADLIIVNTCCVRESAE 60 Query: 61 QESLEAIGEAL-----NENGKVIVTGCLGAKEDQI---REVHPKVLEITGPHSYEQVLEH 112 + L IGE N K+ ++GC+ + + R+ P V G H+ + Sbjct: 61 NKILGKIGELKHLKEANPQLKIAISGCMVQQPGALERLRKRAPHVDIWAGTHNIHEFQRL 120 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + K K E + + AY+ IS GCN+ CT+CI+P +RG S Sbjct: 121 LEEAEEKGKVAEVWEKPRETQESVLLAAKGKLKAYVNISYGCNNFCTYCIVPHVRGRERS 180 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 R E+L+E + LV+ G +E+ ++ Q+ ++YG D+ L + + Sbjct: 181 RQPEEILAEIRALVETGCREVTLLGQNVNSYGQDLDRAYD----------FADLLKDVDS 230 Query: 229 LGIWTRLHYV--YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ ++ +P D +I +A G + ++ +P Q S ILK M R + + L Sbjct: 231 IDGLWRVRFMTSHPKDLSDKLIETIAAGTHLCEHIHLPFQAGSDEILKGMNRKYTREYYL 290 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 +RI Q + I P+++L + IVGFPGETEEDF+ L+ +++ R + F YS G A Sbjct: 291 SRIAQIKVIIPQVSLTTDIIVGFPGETEEDFEQTLELIRQVRYSQAFTFMYSKRSGTPAA 350 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMAD 402 + +Q+P ++K+ R + + +Q S QE +G+ V+++ + + GR+ Sbjct: 351 QMAEQIPLDIKKRRLQQLITVQNAQSLAWRQEMIGKTCEVLVEGPSKSNPDRLTGRTRGY 410 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 V GE + G +++V ++ A+ + L+G Sbjct: 411 -----ELVVFPGEAQL-IGTLVQVLIQDANSWTLFGE 441 >UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E278_DICTD Length = 441 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 118/453 (26%), Positives = 212/453 (46%), Gaps = 35/453 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 PK ++ GC N DSE++ L + GY ++AD++++NTC + A ++ Sbjct: 1 MPKYHIITYGCQMNKSDSEKVAGILESLGYIPSEKMEEADLILLNTCSVRERAEEKVFGK 60 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +GE K + + GC+ + ++++ E P V + G + + ++ + + Sbjct: 61 LGELRKLKKKNQKLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKVLESLNDNN 120 Query: 121 KHNPFLSLVPEQ------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K P+ ++ + A++ I GCN+ CT+CI+P +RG SR E+ Sbjct: 121 KKIVLAEDNPKPEEVDFRIIRRENKFQAWIPIIYGCNNFCTYCIVPYLRGKEKSRDPQEI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + L + GV E+ ++ Q+ +YG D+ + + L ++ K+ R Sbjct: 181 IKEIEHLANQGVVEVTLLGQNVDSYGKDLGN-----------VDLADLLVEIHKIPGIKR 229 Query: 235 LHYV--YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + ++ +P D +I ++A KI P+ +PLQ S RIL+ M R + + A I++ Sbjct: 230 IRFLTSHPRDVSDKLINVVATHPKICPHWHLPLQAGSDRILRRMGRGYTYNEYKALIEKI 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P + + IVGFPGE EEDF L+E + D V YS G A + D V Sbjct: 290 RAKIPRASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAASYDDPV 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDG 408 P E K++ ++ LQ++I ER +G+E LV+ + V+ + GR+ Sbjct: 350 PYETKKKWFDELENLQRKIIYERNLSMIGKEELVLAEGVNPKNPKELSGRTENYR----- 404 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V+ + + G L V++ A + L G + Sbjct: 405 LVFFEADRKL-IGKFLLVRIIEARLWSLRGEAI 436 >UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacteria RepID=B9KY11_THERP Length = 458 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 125/443 (28%), Positives = 212/443 (47%), Gaps = 26/443 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + ++GC N +S + LR GY DAD+VIVNTC A ++L I Sbjct: 21 KRFHIWTIGCQMNEAESAKAAALLRQAGYVPAVREWDADIVIVNTCVVRQQAEDKALGYI 80 Query: 68 G-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + + ++ VTGCL +E ++ E P V GP +E+++ V + Sbjct: 81 GALARLKRRRPDVRIAVTGCLVTGQERRLAERFPWVDLWYGPSEFERLVSLVPE-LADVD 139 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + + P A++ + GCN C++CI+P RG SRP+ +V++E ++L Sbjct: 140 IDLVELPHYYDEGQADPEVTAFVPVIYGCNFVCSYCIVPYRRGRERSRPVEQVVAEVEKL 199 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV--Y 239 GV+E+ ++ Q +AYG D+ + + L E++ + R+ ++ + Sbjct: 200 AARGVREVTLLGQTVNAYGHDLPGQP----------DLADLLERVHDVPGIERIRFLTSH 249 Query: 240 PYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D +I +A+ K+ ++++P+Q +L+ M+R +V+ RI + RE+ P++ Sbjct: 250 PKYFSDKLIRAVADLPKVCEHVNLPVQSGDNEVLRRMRRHYTVEEYRERIARIRELIPDV 309 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 TL + IVGFPGETEE F L+E R D+V YSP G + PD VP E K Sbjct: 310 TLSTDIIVGFPGETEEQFLNTYRLLEEIRFDKVHVAMYSPRPGTLSARWPDDVPREEKRR 369 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R QLQ++I+ ER + VGR + +++D + + V+ + Sbjct: 370 RHRAVEQLQERIARERNERYVGRTVEILVDGLARGR-----WRGRTRGNTLVFFEAPGDW 424 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 + G + V+V A + L G V Sbjct: 425 R-GRFVEVRVTQASPWYLLGEPV 446 >UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Proteobacteria RepID=MIAB_SYNAS Length = 461 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 119/452 (26%), Positives = 221/452 (48%), Gaps = 34/452 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + I +LGC N+ DSE+I + +GY ++AD++I+NTC + A Q++ Sbjct: 17 KKHIYIQTLGCQMNVHDSEQIAALMEEKGYICTEDANEADLIILNTCSIREKAAQKAKSQ 76 Query: 67 IGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G N K + V GCL + D++ P + I G H+ Q+ + + Sbjct: 77 LGRYRNLKRKKRNLLIGVGGCLAQQLGDELLTKVPDIDFIFGTHNIHQLPDFISRIEKSR 136 Query: 121 KHNPFLSLVPEQG------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K +L P + + +++ I +GCN+ C++CI+P +RG SRP ++ Sbjct: 137 KKIVETTLHPSTPSIGVLALPCNGQVSSFVTIMQGCNNFCSYCIVPYVRGREESRPPEDI 196 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + L D GVKE+ ++ Q+ ++Y G L ++ K+ R Sbjct: 197 IHEIRMLADHGVKEVTLLGQNVNSYARKTSGEMG----------FAELLREIEKIKGIER 246 Query: 235 LHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P + +I ++ K+ ++ +P Q S RIL LM R + LA++++ Sbjct: 247 MRFTTSHPKDLSEFLITAFSDLSKLCHHIHLPFQSGSDRILALMNRGYTKSDYLAKVERL 306 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R +CP++++ + IVGFPGE++EDF+ +D + + R D + FKYS EG A + +V Sbjct: 307 RTVCPDISITADVIVGFPGESDEDFKETIDMMNQIRFDNLFSFKYSEREGTAAVKMDGKV 366 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPEIDG 408 E +K ER LQ+Q + E+ + G++ V+++ + + GR+ + Sbjct: 367 SEPLKLERLQILQALQEQHTLEKNKAMEGKQEDVLVEGFSKNCRKDLTGRTSTNK----- 421 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V +G ++ GD++ V ++ A + L G Sbjct: 422 IVNFSGCVDL-IGDMVSVLIKEAYLHSLRGEM 452 >UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Anaerococcus RepID=C7HUB2_9FIRM Length = 452 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 114/450 (25%), Positives = 203/450 (45%), Gaps = 29/450 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K + GC N DSERI L GY +DAD ++ NTC ++A + Sbjct: 15 NKKYNITTFGCQMNEHDSERISYILEDLGYTKTDDRNDADFILFNTCLVRENAELKLYGQ 74 Query: 67 IGEAL-----NENGKVIVTGCLGA---KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + N + V+GC+ + I + H +V I G + + + + Y+ Sbjct: 75 VSSLKKLKEENPEKIIAVSGCMMQTSVAREVIEKKHKEVDIIFGTKNINSLPDLLFKYLE 134 Query: 119 KPKHNPFLSLV----PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + +S AY+ I GC++ C++CI+P RG SR + Sbjct: 135 TGERVIDVSEDNVKDDYVNYNSKNNFQAYVNIMRGCDNFCSYCIVPQSRGREESRRPSHI 194 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E + LV G KEI ++ Q+ ++YG N + L E+ +K+ R Sbjct: 195 IEEIENLVKNGYKEITLLGQNVNSYG----------NKSDFNVTFPELLEKCAKIEGLQR 244 Query: 235 LHYV--YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 L + +P DD+I ++ E I Y +P+Q S ++LK M R + ++ L + ++ Sbjct: 245 LRFTTSHPKDLSDDLIRVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEKARKL 304 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +E P + + + IVG+P ETEEDFQ LD ++ D FKYSP A L D + Sbjct: 305 KEEIPGIAISTDIIVGYPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKL-DPI 363 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 +++ ++R++R + I E+ +E VG+ + V+++ + + + V+ Sbjct: 364 DDKIVQDRFDRLLDTLYPIFNEKNKEYVGKVVEVLLESESKNNKNVLT--GRTDTFKLVH 421 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + N+ G I++VK+ + + G V Sbjct: 422 VKADKNL-IGQIVKVKITDNTSFTISGELV 450 >UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=8 Tax=Deinococci RepID=MIAB_THET2 Length = 465 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 130/443 (29%), Positives = 206/443 (46%), Gaps = 25/443 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + ++ GC N DS + +EL + G+++V S ++AD V+VNTC V++ + Sbjct: 26 MRAHIITYGCQMNEYDSHLVASELVSLGWELVDSVEEADFVLVNTCAVRGKPVEKVRSLL 85 Query: 68 GEALNENGK----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 G+ E + + + GCL ++ Q V + GP + + E + Sbjct: 86 GQLRKEKERRGLLIGMMGCLAQLDEGQQMAKKFGVDVLLGPGALTSLPEALKANERFFDL 145 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 ++ A++ I GCNH CT+CI+P+ RG VSR +L E + L Sbjct: 146 TFREDVLDYIPPPPKGALSAHVTIIRGCNHHCTYCIVPTTRGPEVSRHPDLILKEIELLK 205 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYVYPY 241 AGV E+ ++ Q+ ++YG D +P S L + +GI R +P Sbjct: 206 QAGVVEVTLLGQNVNSYGKD----------QPGFPSFAELLRMVGGMGIPRVRFLTSHPV 255 Query: 242 PHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 DD+I +AE I Y+ +P+Q S R+L+ M R L RI++ RE P+ L Sbjct: 256 NFTDDIIEAIAETPAICRYIHLPVQSGSDRVLRRMAREYRRAHYLERIRKIREALPDAVL 315 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 + IVGFPGETEEDFQ L E D+ F YSP G A +P EVK ER Sbjct: 316 STDIIVGFPGETEEDFQETLSLYDEVGYDQAYMFIYSPRPGTPAYKHFQDLPREVKVERL 375 Query: 361 NRFMQLQQQISAERLQEKVGREILVII--DEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R ++ Q++ S R E VG+ + V++ + +E G + P V + Sbjct: 376 MRLIEKQKEWSYRRNLEWVGKTVEVLVRGEAKEEGFVQGHDRGNHP-----VLVPASQAP 430 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 PG + +V+++ A + L+G V Sbjct: 431 VPG-LYQVEIKQATPHLLFGEVV 452 >UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=Leptospirillum RepID=A3EV78_9BACT Length = 468 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 130/449 (28%), Positives = 214/449 (47%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE-- 65 + GC N+ DSER+ L EG + V AD+++VNTC D A Q++L Sbjct: 28 KTFYIKTFGCQMNVHDSERMAGLLTAEGGNPVSEPAAADIILVNTCTIRDKADQKALSDL 87 Query: 66 -AIGEALNENG--KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 I + E + VTGC+ +E ++I + P V I GP ++ + Sbjct: 88 GRIRQVRKEGPGTILAVTGCMAQREGEEIFRLVPDVDLILGPSQIRNLIPLLDAASTSRA 147 Query: 122 HNP----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + P A++ + EGC+ C +C++P+ RG SRP+ +++ E Sbjct: 148 RVDGTLWPVPEMTTPPAIRPPGVTAFVTVQEGCDKACAYCVVPATRGAERSRPVTDIVRE 207 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 + LV +G +EI ++ Q+ + YG G+ S L ++LS + RL + Sbjct: 208 VENLVSSGFREITLLGQNVNGYG---------QKGDTAGASFPELLQRLSDIPGLLRLRF 258 Query: 238 V--YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P +D+I +MA +++P+L +P+Q S R+L+ M+R S+D I++ R+ Sbjct: 259 TTSHPMDMSEDLIDVMATSSRVMPHLHLPVQSGSDRMLERMQRGYSLDDYRRWIEKLRKK 318 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 PE L + IVGF GETEEDF+ L ++E R D F YSP A++ D P E Sbjct: 319 VPEAALTTDLIVGFCGETEEDFEKTLAAVEEFRFDGAFAFIYSPRPSTPAHSWEDVPPRE 378 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYL 412 + ER R + +Q + ER Q VG + ++ ++ D E A+GR+ A+ Sbjct: 379 MSVERLERLQKKVEQQAMERNQSLVGSRVEILTEKWDPETRTAVGRTPQFQTV--RALVA 436 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 + PGD+L V + L G+ V Sbjct: 437 PERPDPSPGDLLWVTITQGARAGLKGNAV 465 >UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=9 Tax=Fusobacterium RepID=MIAB_FUSNN Length = 435 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 122/451 (27%), Positives = 212/451 (47%), Gaps = 32/451 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K ++ GC N+ +S +I + GYDV D+AD V +NTC + A + Sbjct: 1 MKKASIITYGCQMNVNESAKIKKIFQNLGYDVTEEIDNADAVFLNTCTVREGAATQIFGK 60 Query: 67 IGEAL----NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 +GE + VTGC ++ +++ + P + + G + ++ + + Sbjct: 61 LGELKALKEKRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIEKIENNES 120 Query: 122 HNPFL-----SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + L P + A + I+ GCN+ CTFCI+P +RG S P+ E++ Sbjct: 121 THEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYVRGRERSVPLEEIVK 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 + ++ V G KEI+++ Q+ ++YG D K + L +++ K+ R Sbjct: 181 DVEQYVKKGAKEIVLLGQNVNSYGKDFK----------NGDNFAKLLDEICKVEGDYIVR 230 Query: 235 LHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +P DDVI ++A+ K I L +PLQ S +ILK M+R + ++ LA + + + Sbjct: 231 FVSPHPRDFTDDVIEVIAKNKKISKCLHLPLQSGSSQILKKMRRGYTKEKYLALVDKIKS 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P + L + IVGFPGETEEDF +D +++ D F YS +G A + +Q+ E Sbjct: 291 KIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSFDNSYMFMYSIRKGTKAATMDNQIEE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAV 410 VK+ER R M++Q + S + GR + V+++ ++ GR+ + V Sbjct: 351 SVKKERLQRLMEVQNKCSFYESSKYKGRIVKVLVEGPSKKNKEVLSGRTSTNK-----IV 405 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G +K G + VK+ + L+G V Sbjct: 406 LFRGNLALK-GQFINVKINECKTWTLYGEIV 435 >UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fusobacteriaceae RepID=C7NCD8_LEPBD Length = 441 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 121/452 (26%), Positives = 206/452 (45%), Gaps = 32/452 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL--- 64 + ++ GC N+ +S ++ L+T GY++ ++ D+V +NTC + A + Sbjct: 3 KRATIITYGCQMNVNESAKMKQMLQTMGYNMTEDIENTDLVFLNTCTVREGAAVKVYGKL 62 Query: 65 ---EAIGEALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + I E + + VTGCL D+ + P V + G + ++ + + Sbjct: 63 GDLKRIKEEKDGKMIIGVTGCLAQEVRDEFIKKTPYVDLVLGNQNIGRIPDILERIESGE 122 Query: 121 K-----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + L A + I+ GCN+ CTFCI+P +RG S P+ E++ Sbjct: 123 DTHIVMVDDEDELPTRVDADFGDDIVASISITYGCNNYCTFCIVPYVRGMERSVPLNEII 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 + ++ G KEIL + Q+ ++YG D + + L EQ + + + Sbjct: 183 RDVEQYTKKGYKEILFLGQNVNSYGSDFANGQD---------NFAELLEQSANVEGDFWI 233 Query: 236 HYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 YV P+P D+VI ++A KI L +PLQ S +IL M R + + +A K+ + Sbjct: 234 KYVSPHPKDFSDEVIDVIARNPKIARMLHLPLQSGSTKILDSMNRGYTKEEFIALAKKIK 293 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E P++ L + IVGFPGET+EDFQ +D + E + F YS G A + +QV Sbjct: 294 EKIPDIGLTTDIIVGFPGETDEDFQDTMDVVNEVGFENAFMFMYSKRTGTPAATMEEQVD 353 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD---EEGAIGRSMADAPEIDGA 409 E+ K ER + M+LQ + E Q+ +G+ + V+++ E GRS Sbjct: 354 EQTKNERLQQLMRLQNMKAKEESQKYLGQTVKVLVEGPSRKNPEMLTGRSSTHK-----I 408 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + G + VK+ A + L+G V Sbjct: 409 ILFKSDRKDLKGQFVNVKIYDAKTWTLYGEMV 440 >UniRef50_Q2LQ68 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophus aciditrophicus SB RepID=RIMO_SYNAS Length = 453 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 161/454 (35%), Positives = 243/454 (53%), Gaps = 32/454 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + VSLGCPKNL+DSE + L G +V ++AD++++NTC FI A +ES++ I Sbjct: 6 VHIVSLGCPKNLIDSEVMAALLEQAGCRIVSGPEEADILLLNTCAFILPAREESIDEIFR 65 Query: 70 ALNENGK-----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP--- 120 +IVTGCL + ++ P+V G + +H+ + Sbjct: 66 LAEWKKAGKCRHLIVTGCLPQRYGAELAAELPEVDLFLGISEVPNIADHLRVLMEGKHSE 125 Query: 121 ------KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + FL + TP + AYLKI+EGC++RC++CIIP +RG SRPI ++ Sbjct: 126 KNRVIVTNPLFLMDAGHPRLLSTPPYSAYLKIAEGCSNRCSYCIIPRLRGKARSRPIEDI 185 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IW 232 L EA+ LVD GV+E+++++QDT+AYG D++ K ++ L +L+ L W Sbjct: 186 LREAEDLVDRGVRELILVAQDTTAYGRDLEG----------KPTLALLLRELAGLNTLAW 235 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R+ Y YP D+++ ++A +I YLD+P+QH IL MKR G +++ Sbjct: 236 IRILYTYPTGLTDELLNVIANQDRICSYLDVPIQHIDDDILAAMKRRGDSHLIRNSLERA 295 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R + P+L LR++ I GFPGET F L+ F++E R D +G F YSP EG A LP QV Sbjct: 296 RAVIPDLALRTSLITGFPGETPAKFHRLIAFVQETRFDHLGVFPYSPEEGTPAEKLPRQV 355 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD---EEGAIGRSMADAPEIDG 408 + KE R N M+ Q IS E Q VG V+I+ + IGR AP+IDG Sbjct: 356 SQRTKETRRNLLMEEQAVISHEINQTLVGSLQEVLIEGPSSSPDYPMIGRCRRQAPDIDG 415 Query: 409 AVYLNGET-NVKPGDILRVKVEHADEYDLWGSRV 441 Y+ G PG +++ ++ AD+YDL+ + Sbjct: 416 LTYVKGGKQPFLPGSLVQCRIVAADDYDLFAEVI 449 >UniRef50_A7NIS8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Chloroflexi (class) RepID=RIMO_ROSCS Length = 482 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 172/474 (36%), Positives = 247/474 (52%), Gaps = 48/474 (10%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ ++LGCPKN VDSE + L +G+ + S DDAD+VIVNTC FI +A +E+L Sbjct: 1 MMKVHIITLGCPKNQVDSEGMSGILAAQGHTLAASADDADVVIVNTCSFIAAAREETLAV 60 Query: 67 IGE---ALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + + +++ GC+ I P V G + ++ E V + P Sbjct: 61 LRDVAACKTPEQRLVAAGCMAESHRAIVAATPGVDATLGTREWTRIAEVVETFQPAATMA 120 Query: 124 P------------------------------FLSLVPEQGVKLTPRHYAYLKISEGCNHR 153 P + + AYLKIS+GCN R Sbjct: 121 PLNAASAREIIPLTSAGVPSPAPHDLSVPGAYADWRTAPIRRRAVGPSAYLKISDGCNLR 180 Query: 154 CTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE 213 C FC IPS +GD+ S+ IG +L EA+ L AGVKEI++++Q + YG D+ + G Sbjct: 181 CAFCTIPSFKGDMRSKAIGAILGEAQELAAAGVKEIVLVAQHLTDYGRDLGLKDG----- 235 Query: 214 PVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRIL 272 + + +C L + +W RL Y YP+ + +I MA +I YLD+PLQHA P L Sbjct: 236 -LAILLDEICAVLPE-NVWVRLMYAYPHGIGERLIATMARHPQICHYLDMPLQHAHPETL 293 Query: 273 KLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVG 332 + M+RP DR I R P++ +RSTFIVGFPGET +F+ LL FL++ + DRVG Sbjct: 294 RRMRRPPDTDRTRRLIDDLRAAIPDIAIRSTFIVGFPGETNTEFRALLAFLEDVQFDRVG 353 Query: 333 CFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE 392 F+YS G A ALPDQ+ + E RW+ M+LQQ+IS ER + +GR + V+++ + Sbjct: 354 VFRYSREPGTPAAALPDQLAPRIIERRWHEIMRLQQRISRERNRRWLGRVVRVLVEGQGQ 413 Query: 393 EG-----AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++GRS DAPE+DG V G PG + V+V A +YDLWG V Sbjct: 414 TDDGRMLSVGRSFRDAPEVDGQVLFWG--AATPGTFVDVRVTQALDYDLWGDVV 465 >UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RIMO_MOOTA Length = 432 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 176/445 (39%), Positives = 263/445 (59%), Gaps = 26/445 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ ++LGCPKN V+SE +L L +VV A++VI+NTC FI +A +E+L+ Sbjct: 1 MIRVAVITLGCPKNQVESEYMLGILEKNHLEVVSDPRQAEVVIINTCSFITAAREEALDT 60 Query: 67 IGEALN--ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH- 122 I E + ++IV GCL + ++ + P+ GP + ++ E ++ + + Sbjct: 61 ILELARAANHPRLIVAGCLAQQYASELWQELPEAAAFIGPGATGRLPEIINRVLKGERVL 120 Query: 123 ---NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 P + + + +AYLKI+EGCN+RCT+C IPS++G SRP+ +V++EA Sbjct: 121 DVPGPEMITGELPRLIEDGKPFAYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVAEAV 180 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L G+KE+++++QDT+AYG+D + L +L+++ W RL Y Sbjct: 181 SLAARGIKELVLVAQDTTAYGLDCYGEY----------RLPELLRRLARIEGIEWVRLLY 230 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP ++I +MA E ++PYLD+PLQHAS +L+ M RPG+ L I+ R P Sbjct: 231 AYPTRITPELIEVMATEPGVVPYLDLPLQHASEGVLRRMGRPGTGAAGLRAIESLRRAIP 290 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 E+T+RSTFIVGFPGE EEDFQ+LLDFL +ARLD VG FK+SP EG A +LP QVPEEVK Sbjct: 291 EITIRSTFIVGFPGEEEEDFQILLDFLTDARLDWVGAFKFSPEEGTIAASLPGQVPEEVK 350 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 EER+ R M QQ I+ + +GRE+ V+ + + +GRSM APE+DG VY+ G+ Sbjct: 351 EERYQRLMLHQQSITRACNEGWLGREVQVLKEGPE----VGRSMRQAPEVDGVVYVKGDP 406 Query: 417 NVKPGDILRVKVEHADE-YDLWGSR 440 + G ++ VK+ YD G Sbjct: 407 S-PAGSMVTVKLTQLYNIYDFLGEI 430 >UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N968_9BACT Length = 446 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 117/455 (25%), Positives = 205/455 (45%), Gaps = 30/455 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI + GC N DSE L G+ +V S + AD+++ NTC + A ++++ I Sbjct: 1 MKIFIKTYGCQMNERDSEAFAGMLVEAGHTMVDSEEQADVLLFNTCSVREQAERKAIGKI 60 Query: 68 GEALNENGK-----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G K + GC+ + + + P + + G ++ + + Sbjct: 61 GFMKKLKAKHPELIIGAMGCMAQRLGNDLLKELPHLDFVLGTGQLHTLVPLIESIRADRR 120 Query: 122 HNPFLSLVPEQGVKLTPRHY---------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 L+ + + A + I+ GCN C++CI+P +RG +SR G Sbjct: 121 QVASLNESEAVLTGMGSHYRPAGDVRNWHAQIAITRGCNRFCSYCIVPYVRGREISRDPG 180 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG-- 230 +V+ EA+ LV AG +E++++ Q+ +AYG+ + E + L E+L ++ Sbjct: 181 DVVREARELVAAGARELMLLGQNVAAYGL----GGNTNPPEDGSSPFAELLEELDRIPEL 236 Query: 231 IWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 + R YP +I +A+ + + + +PLQ S R+LK M R + D L + Sbjct: 237 LRIRFTSPYPTYFNGRLIDAIAKSRTVCHNIHLPLQSGSDRMLKAMNRQYTHDSYLEVVN 296 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + R P++T + IVGFPGET+ DF+ + + D FKYSP GA + AL D Sbjct: 297 RIRAAMPDVTFSTDVIVGFPGETDGDFKQTREVMNTVGFDNSFIFKYSPRPGARSAALAD 356 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEI 406 VP+EVKEER + + L++++G ++++ V GR+ + Sbjct: 357 SVPQEVKEERNQILLNDLKLRVEAFLKQQIGTTQEILVEGVSPRNPARWCGRTGTNR--- 413 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ++ E ++ G + V V A L+G V Sbjct: 414 --LIHFEPEEGLQAGTLRSVTVTRAGSVSLFGELV 446 >UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotransferase n=3 Tax=Cyanobacteria RepID=UPI0001C33830 Length = 439 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 172/449 (38%), Positives = 263/449 (58%), Gaps = 23/449 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + +P I LGC KN +DSE IL L EGY V + + AD V+VNTC FI A +ES Sbjct: 1 MVKKPAIAISHLGCEKNRIDSEHILGLLAAEGYSVSSNENLADYVVVNTCSFIQQAREES 60 Query: 64 LEAIGEALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + + E N K+I+ GC+ +DQ+ E P+V+ I G +Y+++++ V + Sbjct: 61 VRTLVELAENNKKIIIAGCMAQHFQDQLLEELPEVVAIVGTGNYQEIVKTVQRVELGERV 120 Query: 123 NPFLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + PR+ AYL+I+EGCN+RCTFCIIP +RG+ SR I +++ Sbjct: 121 IDISQKPTFIADETVPRYRTTNEGVAYLRIAEGCNYRCTFCIIPHLRGNQRSRTIESIVA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG-IWTRL 235 EA++L + GV+EI+++SQ T+ YG+D+ K + L + L K+ W R+ Sbjct: 181 EAQQLANEGVQEIIIVSQITTNYGLDLYG----------KVKLAELLQALGKVNVPWIRV 230 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY YP +V+ + E ++PYLD+PLQH+ P+ILK M RP IK R Sbjct: 231 HYAYPTGLTAEVLKAVKEVPNVIPYLDLPLQHSHPKILKAMNRPWKEAINDEIIKSIRAS 290 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LR+TFIVGFPGET+E F+ L+ F+K D VG F +SP EG + +PDQVP E Sbjct: 291 IPDVVLRTTFIVGFPGETDEYFEHLVKFIKRHHFDHVGVFVFSPEEGTPSYKMPDQVPLE 350 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYL 412 + +ER + M++QQ IS + Q+ VG+ + V+I++ + + IGRS+ +P++DG V++ Sbjct: 351 IAQERRDYLMEIQQPISNRKNQQYVGKIVKVLIEQENTKTHQYIGRSIKSSPDVDGVVFV 410 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ + I+ V++ AD YDL+G V Sbjct: 411 KGKAQL--NSIIPVEITKADAYDLYGKVV 437 >UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_BACFN Length = 457 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 122/458 (26%), Positives = 202/458 (44%), Gaps = 32/458 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + K+ + GC N+ DSE I + ++ GY V + ++AD V +NTC D+A Q Sbjct: 12 ATADDNKKLFIETYGCQMNVADSEVIASVMQMAGYSVAETLEEADAVFMNTCSIRDNAEQ 71 Query: 62 ESLEAI-----GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 + L + + ++ V V GC+ + H V + GP +Y + E + Sbjct: 72 KILNRLEFFHSMKKKKKHLIVGVLGCMAERVKDDLIEHHHVDLVVGPDAYLTLPELIASV 131 Query: 117 VPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 K E + P ++ I GCN+ CT+CI+P RG SR Sbjct: 132 EAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTRGRERSRD 191 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL- 229 + +L+E LV G KEI ++ Q+ ++Y F + L +++ Sbjct: 192 VESILNEVADLVSKGYKEITLLGQNVNSY--------RFEKEGGEVVTFPMLLRLVAEAA 243 Query: 230 -GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 GI R +P D+ + ++A+ + ++ +P+Q S RILKLM R + + L R Sbjct: 244 PGIRVRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDR 303 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA- 346 + + I P+ L + GF ETEED + L ++ D FKYS G A+ Sbjct: 304 VAAIKRIVPDCGLTTDIFSGFHSETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKH 363 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADA 403 L D VPEE+K R N + LQ ++SAE +G+ V+++ V + + GR+ + Sbjct: 364 LEDNVPEEIKVRRLNEIIALQNRLSAESNNRCIGKTYEVLVEGVSKRSRDQLFGRTEQNR 423 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + GD + V++ A L G V Sbjct: 424 ------VVVFDRGTHRIGDFVNVRITEASSATLKGEEV 455 >UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=MIAB_THEYD Length = 431 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 126/446 (28%), Positives = 210/446 (47%), Gaps = 36/446 (8%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + + GC N DSER+L L T+G+ V AD+VI NTC A Q+ ++G Sbjct: 6 VYIKTFGCQMNEHDSERMLGILGTKGFIEVDEPKKADIVIFNTCAIRHKAEQKFFSSLGR 65 Query: 70 -----ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 N K+IV GC + + + P + I GP + + + + V H Sbjct: 66 VKHLKKKNPQLKIIVAGCSAQLQGEKLLNKLPYIDYIIGPDNLHVIENIIENQVS---HR 122 Query: 124 PFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F PE P A++ I GCN+ CT+C++P RG SRP+ +++ E Sbjct: 123 IFTDENPEVANINLPVKRKDCVKAWVNIIYGCNNYCTYCVVPYTRGKERSRPVDDIIKEI 182 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 L + G KE+ ++ Q+ ++Y + T+ L E++ K+ R+ ++ Sbjct: 183 SLLAEQGYKEVTLLGQNVNSY-------------KDGNTNFPLLLEKVEKIEGIKRIRFI 229 Query: 239 --YPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P +++ +M + K I ++ +PLQ S +ILKLM R + + +I RE Sbjct: 230 TSHPKDLSKELVDVMKDYKKICEHIHLPLQAGSNKILKLMNRKYTYEEYFEKICWLREAI 289 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P++ + S IVGFP E EDF+ ++ LKE R D + FK+SP G A L + EEV Sbjct: 290 PDIAITSDIIVGFPQEQHEDFEKTINALKEIRFDGIFAFKFSPRLGTAAAKLDGHISEEV 349 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K R ++LQ +I+ + + G+ V+++ DEEG + V + + Sbjct: 350 KAARLIEVLKLQDEITERKNKRLEGKIQEVLVEGKDEEGFT----TGKTRTNKVVKIYSD 405 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 +K G+I+ VK+ + L G + Sbjct: 406 --IKAGEIVNVKIAKTHRHSLEGDII 429 >UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD6_9DELT Length = 463 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 177/469 (37%), Positives = 250/469 (53%), Gaps = 40/469 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 I SLGCPKNLVDSE +L +L EG V +AD+++VNTCGFI SAV+E ++ Sbjct: 1 MKTIHLTSLGCPKNLVDSELMLGQLVEEGLRPVSEPGEADVLLVNTCGFIQSAVEEGIDT 60 Query: 67 IG----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVH------- 114 I + + +V+V GCL + + E P+V G + + Sbjct: 61 ILGLIEQKKSPAVRVVVCGCLVQRYGSGLVEELPEVDLFLGTEEVSSIAARLRALEEGRA 120 Query: 115 -----------------HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFC 157 Y P FL TP H AYLKI+EGC +RC++C Sbjct: 121 APESGSVPAGAPAADSLRYRPVDDLQRFLPNATLPRRLTTPAHRAYLKITEGCGNRCSYC 180 Query: 158 IIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT 217 +IP++RG L SR ++L EA+ L AGVKE+ +++QD +AYG+D+ G + Sbjct: 181 MIPAIRGPLRSRRPADILHEARALAAAGVKELTLVAQDLTAYGLDLGPG-----GPRLPD 235 Query: 218 SMVSLCEQLSKLG-IWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLM 275 + L +L W RL Y+YP D+++ L+A +ILPY D+P QH + +LK M Sbjct: 236 LLAQLHRELPAAQVPWIRLLYLYPSRVNDELLELVAANPRILPYFDLPFQHVADPVLKAM 295 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 RP + + R + P +RSTF+VGFPGE EED + L FL++ RL+ VG F Sbjct: 296 NRPYGEALVRELVDRVRRLVPRAVIRSTFMVGFPGEREEDVEALAAFLRDCRLEHVGMFT 355 Query: 336 YSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG- 394 Y EG+ A LP QVPEE+KE+R+ R M LQ +IS Q +VG+ V+++ V E Sbjct: 356 YCNEEGSAAATLPGQVPEELKEQRFQRLMALQAEISLAANQARVGQVEEVLVEGVSSETE 415 Query: 395 --AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 GR+ APEIDG VY+N E N + G+++RV + A YDL G V Sbjct: 416 LLLEGRAWFQAPEIDGCVYIN-EGNCRAGELVRVLISEAHPYDLVGGIV 463 >UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RIMO_NATTJ Length = 444 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 156/450 (34%), Positives = 245/450 (54%), Gaps = 28/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+G +SLGC KN VD+E + L Y + Y DAD++IVNTCGFID A +ES++ I Sbjct: 1 MKVGIISLGCAKNQVDTEVMQGILENSNYKMTDDYYDADIIIVNTCGFIDDAKEESVDHI 60 Query: 68 GEALNEN-----GKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP- 120 E +IV GCL + + ++E P++ + G + +++ E + + Sbjct: 61 LEVAQLKETGKLKVLIVAGCLSQRYQESLKEEIPEIDAMIGTDTQDKITEVISSALKGNY 120 Query: 121 ----KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + P AY+KI+EGC++ C++C IP +RG SR I ++ Sbjct: 121 ISFYDRLNKIDEQLFLRQPYQPGPSAYIKIAEGCHNYCSYCAIPLIRGGYRSRTIEDIKI 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 EA ++ G KE+ +I+QDT+ YG D+ K S+ +L ++L+ + W R Sbjct: 181 EANHFIEKGSKELTLIAQDTTNYGSDIYG----------KFSLDTLLDELATIPGDFWIR 230 Query: 235 LHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP D +I ++ KI YLDIPLQH IL M R G+ ++ L I R+ Sbjct: 231 VLYAYPTRITDSLIEVINRHEKICSYLDIPLQHIDDDILTSMNRGGNKEQILNLIHNLRK 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++TLR++ IVGFPGET+E +Q L+ F++E D G FKYS E A D+V E Sbjct: 291 NIPDITLRTSLIVGFPGETDEKYQNLISFMQEIEFDHAGIFKYSDEEDTQAYNFKDKVSE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAV 410 +VKE+R+ ++Q++I+ ++ + VG E+ V+I+E E+ +GR+ APE+DGAV Sbjct: 351 DVKEQRYQEAWEVQKEITRKKNEGLVGTEMRVLIEEALEDEPTTKVGRTEGHAPEVDGAV 410 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + GD + V++ A +YDL G Sbjct: 411 IIP-DCEASSGDFINVEIVQALDYDLIGEM 439 >UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG09_SEBTE Length = 445 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 120/451 (26%), Positives = 205/451 (45%), Gaps = 32/451 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K ++ GC N+ +S ++ L++ GY +V +D+V++NTC + A + + Sbjct: 10 KKATIITYGCQMNVNESAKMKKMLQSIGYKIVDDIKISDLVLLNTCTVREGAAVKVYGKL 69 Query: 68 GEALN-----ENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP- 120 GE N + VTGCL ++ + P V + G + ++ + + Sbjct: 70 GELKKLKEKRNNMIIGVTGCLAQEVREEFIKRTPFVDLVIGNQNIAKLPDIIEKIQKGTV 129 Query: 121 ----KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 L A + I+ GCN+ CTFCI+P +RG S P+ E+L Sbjct: 130 DHIVMVEDEDELPKRVDADFGDDIVASVSITYGCNNYCTFCIVPYVRGMERSVPMREILD 189 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + K+ D G KEIL + Q+ ++YG D + L + + + L Sbjct: 190 DVKQYADKGYKEILFLGQNVNSYGSD---------RIEMGEDFAGLLTKAANIEGDFWLK 240 Query: 237 YVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 Y+ P+P D VI +AE K+ L +PLQ S +IL M R + + + + ++ Sbjct: 241 YISPHPKDFTDSVIKAIAENPKVARMLHLPLQSGSTKILGAMNRGYTKEEFIELALKIKK 300 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++ + + IVGFPGET+EDFQ LD +++ + F YS G A L +QVPE Sbjct: 301 EIPDIGITTDIIVGFPGETDEDFQDTLDVVEQVGFENAFMFMYSKRSGTPAAVLEEQVPE 360 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD---EEGAIGRSMADAPEIDGAV 410 +VK+ER + M+LQ + E ++ G+ + V+++ + GR+ V Sbjct: 361 QVKKERLQQLMRLQNARAKEESKKYYGQTLKVLVEGPSSKNPDMLTGRTSTHK-----IV 415 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ + G + VK+ + L+G V Sbjct: 416 LFKGDEELS-GKFVNVKIYETKTWTLYGELV 445 >UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Dictyoglomus RepID=RIMO_DICT6 Length = 440 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 158/450 (35%), Positives = 242/450 (53%), Gaps = 25/450 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K G + LGC KN VD+E ++ L+ GY P +AD+V+VNTC FI A QE+ E Sbjct: 1 MKKAGIIHLGCSKNQVDTEILMGFLKELGYTFTPYLGEADLVLVNTCAFIKPAWQEAEEN 60 Query: 67 IGEAL-----NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHV----HHY 116 I N+N K++VTGC + E ++ + +P V GP Y++ + + Sbjct: 61 INFLKEYKENNKNLKIVVTGCYVERFEKELEDRYPFVDLFIGPGEYDKFVSLITSNGERK 120 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + F+ V ++P + Y+KISEGCN+ C++C IP +RG L SR I +++ Sbjct: 121 IHSSPASSFMYTHKMPRVLISPNFWVYVKISEGCNNFCSYCTIPFIRGRLRSRSIDDIIK 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TR 234 E + LV GVKEI +I+QDT+ YG D+ K+++V L + + + R Sbjct: 181 EVEILVQKGVKEINLIAQDTTRYGEDLYG----------KSALVDLLKSIENIKGDFYVR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP D+I + K++PY DIP+QH + ILK M R D + RE Sbjct: 231 ILYSYPSRVTKDLINFIKVSEKVVPYFDIPIQHVNDEILKKMNRSYKKDDIIRVWSTIRE 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + +R+T +VGFPGETEE+F+ L+ F+K DR+G F Y EG + Q+ E Sbjct: 291 NFEDAVIRTTVMVGFPGETEENFEELIAFIKAYPFDRLGAFTYYNEEGTISKNFDGQIDE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 + K R++ M Q++IS + + +GRE VII+ + IGRS +APE+DG + + Sbjct: 351 DEKIRRYDILMSTQKEISKKLNAKLLGREFDVIIENEKGKYFIGRSWREAPEVDGVIMIP 410 Query: 414 --GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ GD +RVK++ YDL G V Sbjct: 411 KEGSRSISIGDRVRVKIKKYRAYDLLGELV 440 >UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Thermotogaceae RepID=MIAB_THEP1 Length = 443 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 125/446 (28%), Positives = 211/446 (47%), Gaps = 28/446 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + + GC N DSE + L EG+ + ++AD+VI+NTC + +++ + Sbjct: 1 MRFYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSEL 60 Query: 68 GEA----LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 G+ V V GC+ KE + + G + +V E V + K Sbjct: 61 GQMLKIKRKRKLVVGVAGCVAEKEREKLLE-RGADFVLGTRAVLKVTEAVKRALQGEKVA 119 Query: 124 PFLSLVPEQGVKL----TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F + E +L + +H+A++ I GC+ CT+CI+P RG SRP+ ++L E + Sbjct: 120 LFEDHLDEYTHELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEVR 179 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV- 238 L G +E+ + Q+ AYG D+K + S+ L E+ SK+ R+ ++ Sbjct: 180 ELAKQGYREVTFLGQNVDAYGKDLKDGS----------SLAKLLEEASKIEGIERIWFLT 229 Query: 239 -YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP D++I ++A K+ + +P+Q S RILKLM R + + LA +++ R P Sbjct: 230 SYPTDFSDELIEVIARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVP 289 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVPEEV 355 ++ + S IVGFP ETEEDF +D +++A+ +R+ YSP +G A D+VP E Sbjct: 290 DVAISSDIIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKGTVAWKHYKDEVPYEE 349 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K R M LQ++I+ + + G+ + VI++ + G +I + Sbjct: 350 KVRRMQFLMNLQKRINRKLNERYKGKTVRVIVEAQAKNGLF-----YGRDIRNKIIAFEG 404 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 G VK+E L+G V Sbjct: 405 EEWMIGRFADVKIEKITAGPLYGKVV 430 >UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO n=65 Tax=Bacteria RepID=RIMO_CLOB8 Length = 465 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 170/455 (37%), Positives = 268/455 (58%), Gaps = 26/455 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + + K+G VSLGC KN VDSE IL ++ E Y++ + +AD++IVNTCGFI+SA Q Sbjct: 17 EEASSKYKVGMVSLGCDKNRVDSEIILGKMSDE-YEITNNPKNADIIIVNTCGFIESAKQ 75 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGAKEDQIRE-VHPKVLEITGPHSYEQVLEHVHH 115 ES++ I E N +I TGCL + + + + P++ + G + Y ++ E + Sbjct: 76 ESIDTILEMANYKINYKCKLLIATGCLTQRYGEELKTLIPEIDIMLGVNDYNKINEIITE 135 Query: 116 YVPKPKHNPFL------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 ++ K L ++ + + T R AY++I+EGCN+ CT+CIIP +RG SR Sbjct: 136 FIDGNKLATELLNYSDENINEGKRIITTQRESAYIRIAEGCNNFCTYCIIPKIRGKFRSR 195 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL 229 + +++EA+ L ++GVKEI++I+QDT+ YG D+ K ++ L ++LSK+ Sbjct: 196 KMENIINEARDLSESGVKEIILIAQDTTLYGSDIYG----------KKNLHVLLKELSKI 245 Query: 230 GI--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W R+ Y YP D++I +A K++ YLDIP+QH S +ILKLM R S + Sbjct: 246 EGIEWIRVLYCYPEEIYDELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSKKDIIN 305 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 +I+ RE PE+ +R+TFIVGFP ET+EDF ++DFLKE +L++VG F YS E A Sbjct: 306 KIQILRERVPEIVIRTTFIVGFPNETDEDFNEIIDFLKEYKLEKVGAFTYSQEEDTPAAK 365 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 + Q+ EE+KE+R M LQ+ IS E + K+G+ ++++ + + GRS AP+I Sbjct: 366 MDGQIDEEIKEKREEDLMLLQKNISEEINKLKIGKLYDILVEGYNGKCYYGRSYEMAPDI 425 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 D V ++ G+ ++VK+ +YDL G V Sbjct: 426 DANVLFESNAKIENGEFVKVKIVETMDYDLVGVVV 460 >UniRef50_A9F1Y8 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Myxococcales RepID=RIMO_SORC5 Length = 488 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 167/450 (37%), Positives = 254/450 (56%), Gaps = 20/450 (4%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 K+ FVSLGCPKN VDSE +L R G+ V +A++++VNTCGFI A +ES++ Sbjct: 2 SSRKVHFVSLGCPKNRVDSEVMLGVARAAGFAHVDDAAEAEVIVVNTCGFIGEAKKESID 61 Query: 66 AIGEALNEN-----GKVIVTGCLGAKEDQIRE-VHPKVLEITGPHSYEQVLEHVH---HY 116 AI E +++V GCL + + P+V G ++ + Sbjct: 62 AIFEMAQHKEHGSCKRLVVAGCLSQRHPEELAREMPEVDHFLGSSDMLKLGRVLAGDAER 121 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + +L + TP AY+KI+EGCN C+FC+IP +RG SRPI +V+ Sbjct: 122 MLVGNPAEWLIQAGDPRTLSTPGGSAYVKIAEGCNRTCSFCVIPDLRGAQRSRPIPDVVR 181 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E ++L AGV+EI +ISQDT AYG D R+ + ++ L E+++ + W R Sbjct: 182 EVEQLAAAGVREINLISQDTIAYGRDAAGRSEGG----ARATLAQLVERVADVPGVRWVR 237 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y+YP DD++ L+A +++PY+D+PLQHA+ +L+ M+R DR + RE Sbjct: 238 LFYLYPETMTDDLVELLAGHPRVVPYVDMPLQHAADAMLRRMRRGHGGDRLRRVVSTLRE 297 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P+LT R+ FIVG PGET+ +F+ L DF++ A +RVG F+YS E + + L +VP Sbjct: 298 RVPDLTFRTAFIVGHPGETDAEFEELCDFVRWAEFERVGVFRYSDEEASRSYELEGKVPA 357 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAV 410 R+ R M LQ++IS ++ +GRE+ V+++ +E +GR APEIDG V Sbjct: 358 RTAASRYRRLMTLQRRISHKKSAAMIGRELEVLVEGTSDEHEYVLMGRHAGQAPEIDGQV 417 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSR 440 YL+G V+PG++ RV++ A +YDL G Sbjct: 418 YLSG-GEVRPGEMCRVRITQASDYDLVGEL 446 >UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO n=47 Tax=Bacteria RepID=RIMO_DEIGD Length = 485 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 269/460 (58%), Positives = 338/460 (73%), Gaps = 24/460 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 PK+GF+SLGCPK LVDSERILT+LR EGY+V P+Y+DA VIVNTCGFI AV+ES Sbjct: 10 TVAAPKVGFISLGCPKALVDSERILTQLRAEGYEVAPNYEDAQAVIVNTCGFITPAVEES 69 Query: 64 LEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 L AIGEAL+ GKVIVTGCLG + ++I E HPKV ITG + + V+ HV +P + + Sbjct: 70 LSAIGEALDATGKVIVTGCLGERPEKILERHPKVAAITGSEAVDDVMAHVRELLP-IELD 128 Query: 124 PFLSLVP------------EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 PF L+P VKLTPRHYAY+KI+EGCNH C+FCIIP +RG VSR Sbjct: 129 PFTGLLPVAAPGMRQGDTLAPSVKLTPRHYAYVKIAEGCNHTCSFCIIPKLRGRQVSRDA 188 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 G VL EA RL+ G KE+++ISQDTSAYGVD++HRT GE V+ ++ L E+L ++G Sbjct: 189 GAVLYEAYRLIAGGTKELMIISQDTSAYGVDLRHRTSEFQGEQVRAHLIDLAEKLGEMGA 248 Query: 232 WTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 W R+HYVYPYPHV+ ++ LM++GKILPYLD+PLQHASP +LK M+RPG+ + L I++W Sbjct: 249 WVRMHYVYPYPHVERIVELMSQGKILPYLDVPLQHASPAVLKRMRRPGAGKQ-LDTIRRW 307 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 REICPEL +RSTFIVGFPGETEEDFQ+LLDFL+EARLDRVG F YS VE ADANAL + Sbjct: 308 REICPELVIRSTFIVGFPGETEEDFQLLLDFLEEARLDRVGAFTYSDVEEADANALDGAI 367 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-------AIGRSMADAP 404 PEEVK+ER RFM++ Q+IS E+L EKVGR + VIIDE +++ IGR+ DAP Sbjct: 368 PEEVKQERLARFMEVAQRISREKLAEKVGRVLDVIIDEFNDDEGDEPGTRLIGRTKGDAP 427 Query: 405 EIDGAVYL---NGETNVKPGDILRVKVEHADEYDLWGSRV 441 IDG VYL + VK GDI++ ++E +DEYDL+G + Sbjct: 428 GIDGQVYLYAGDFAGQVKIGDIVQARIEDSDEYDLYGEVI 467 >UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Deltaproteobacteria RepID=RIMO_DESPS Length = 443 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 167/450 (37%), Positives = 257/450 (57%), Gaps = 26/450 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K +SLGC KNLVDSE +L LR G+++ DAD+++VNTCGFI AV+E++E I Sbjct: 1 MKFHLISLGCAKNLVDSEVVLGCLRDAGWEMT-DEQDADLLLVNTCGFIQPAVEEAVEEI 59 Query: 68 GEALN-----ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 ++ K++V GCL + + + E P+V G + E+V + + Sbjct: 60 LALVDIKADFPEKKIVVLGCLVQRYKEQLLESLPEVDLFVGTEGVANIAEYVGKLIAGEE 119 Query: 122 HN------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + FL + TP A++KI+EGC++RC++C+IPS+RG L SR + +VL Sbjct: 120 QDKVIMPTEFLMTAKVPRQQSTPFFRAWVKITEGCDNRCSYCMIPSIRGPLRSRSVADVL 179 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E + +V +GV+EI +I+QD +AYG D+ + S+ W RL Sbjct: 180 EEVQAMVASGVQEISLIAQDLTAYGDDLGDDVNLLVLLKELLAKTSV--------PWIRL 231 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+YP +D+++ LMA +I+ YLDIP+QH + R+L LM RP + + R Sbjct: 232 LYLYPSELLDELLQLMAANPRIVKYLDIPIQHVNDRVLHLMNRPYGRADLEEFVDKARAH 291 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ LR+TF+VGFPGETEE++ + +FL+ +LD VG F YS EGA + PDQV +E Sbjct: 292 MPDIALRTTFLVGFPGETEEEYAEIGEFLRVRKLDHVGVFPYSNEEGAPSEHFPDQVDDE 351 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVY 411 +KE R R ++LQQ++S E ++ VG V+++ V EE GR+ A ++DG VY Sbjct: 352 IKESRCARLLELQQELSTEIQKKYVGTVQKVLVEGVSEETDLLLEGRTQYQAADVDGRVY 411 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 +N E V G+I+ + + + +YDL G V Sbjct: 412 IN-EGQVVAGEIVDILITDSQQYDLVGGVV 440 >UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=MIAB_COPPD Length = 426 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 121/439 (27%), Positives = 202/439 (46%), Gaps = 23/439 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N DSE + L++ G++ + D+D+V++NTC A + ++ I Sbjct: 1 MKYYIFTYGCQMNKNDSEMVSGILKSSGWEEAKNVVDSDLVVINTCSVRLHAEERAIGTI 60 Query: 68 GEALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 KV+V GC+ + ++I P V + GP +L+ ++ + + Sbjct: 61 SALKKLGKKVVVMGCMSEVRGNEIMSRFPHVQAVLGPSYEAHILDVLNGERRILVGDEKV 120 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 +H Y+ I +GC+ CT+CI+P RG + SR +L E + VD G Sbjct: 121 DFEKYSSANRKEKHSVYVSIMKGCDDFCTYCIVPFTRGRVQSRDPESILEEVRVCVDNGA 180 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV-- 244 EI ++ Q+ + YG D+ VSL E+++ + R+ ++ P+P Sbjct: 181 VEITLLGQNVNDYGKDLSG-----------WDFVSLVERVATIDGVRRIRFMSPHPANFK 229 Query: 245 -DDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRST 303 DD+ L ++ PY +PLQ IL+ M R + + RE P + + + Sbjct: 230 KDDITRLANLPQVAPYYHLPLQSGDDEILRRMNRKYTTGEFAELVGFIRESVPNVAIGTD 289 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP-DQVPEEVKEERWNR 362 IVGFPGE++E FQ FL++ + D V YSP G A VP EV + R++ Sbjct: 290 LIVGFPGESDEHFQNTFKFLEKMQFDVVYMAIYSPRPGTAAARQETSFVPAEVAKARYDE 349 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLNGETNVKP 420 ++LQ++IS Q VG V+ID D+ IGR+ + V +V P Sbjct: 350 LLRLQEKISYSINQRYVGTLQEVLIDREDKTTGKFIGRTPTNKT-----VVFTSIRHVSP 404 Query: 421 GDILRVKVEHADEYDLWGS 439 G+ + V++ A + L+G Sbjct: 405 GEFVDVRINEAKSWVLYGE 423 >UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Verrucomicrobia RepID=MIAB_METI4 Length = 467 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 126/455 (27%), Positives = 225/455 (49%), Gaps = 33/455 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + + GC N+ DSE++L + GY + S AD++++NTC A +++++ Sbjct: 1 MPSVFIKTFGCQMNVRDSEQVLQDFIERGYQIASSEKWADIILINTCSVRAMAEEKAIDK 60 Query: 67 IG-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + N N + + GC+ + +I E + V + G + +V E + + P Sbjct: 61 LASLKTAKKKNPNLVLGIIGCMAQNRGREIAEKYRFVDLVLGTQKFHKVAEIADNLLKNP 120 Query: 121 KH---------NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + + AY+ I +GC+ C+FCI+P+ RG+ SRPI Sbjct: 121 DRSSSYVDLSKEEAAHNAINKHLSTKAQPIAYVSIMQGCSMHCSFCIVPTTRGEERSRPI 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 E+ E KRL + VKEI+++ Q + YG K+ V L E+LS + Sbjct: 181 DEIFEEVKRLAETSVKEIVLLGQIVNRYG------AKEFPWVKGKSPFVQLLEKLSTIEE 234 Query: 232 WTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + P+P +D+I + + ++ ++ +P+Q S +ILK M+R S + L+ + Sbjct: 235 IKRIRFTSPHPLGFKEDLIAALRDIPQLCEHVHLPVQSGSDKILKAMRRGYSRSKFLSLV 294 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R+ P+L L + IVG+PGETEEDFQ L E R D F+YS EG A +L Sbjct: 295 DKLRKAIPQLALSTDIIVGYPGETEEDFQQTCSLLNEVRFDNAFIFRYSAREGTTAASLG 354 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPE 405 DQ+ EEVK ER R +++Q +I+ E+ Q+ VG+ + ++++ ++ GR+ + Sbjct: 355 DQLSEEVKFERNYRLLEIQNKITMEKAQKWVGQVVEILVEGESKKNASKFQGRTRTN--- 411 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + + G+ L V++ + +G+ Sbjct: 412 --HLVIIPKNERWR-GEFLPVRIVETTGHTFYGTP 443 >UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillonella RepID=D1BMG0_VEIPT Length = 431 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 118/444 (26%), Positives = 205/444 (46%), Gaps = 28/444 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + F +LGC N D++ + Y+ V + AD+ ++NTC + ++S + Sbjct: 1 MKTVAFTTLGCRVNQYDTDAMKGLFLQNNYEAVDFDEKADIYVINTCSVTNMGEKKSRQL 60 Query: 67 IGEALNEN--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I +A +N VIVTGC + V + G ++ +++E V + Sbjct: 61 IRKAKRQNEDAYVIVTGCYAQLDPDAIAAIDGVNLVIGTNNRSKIVELVEQLESTERQIN 120 Query: 125 FLSLVPEQGV--------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + ++ + + A++KI EGCN+ C FCIIP RG L SR + +++ Sbjct: 121 AVRDIMKESNFEEMPLFGNESDKTRAFMKIQEGCNNYCAFCIIPYTRGKLKSRKVDDIVQ 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTR 234 EAKRLVD G EI++ YGV++ R ++ + + L ++ R Sbjct: 181 EAKRLVDHGFHEIVLTGIHLGNYGVELPGRP----------TLADVVKALLEIPNLYRIR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + D+++ LMA ++ P+L +PLQ S +LKLMKR ++ I R Sbjct: 231 FGSIESVEVSDELVELMATNKRVCPHLHLPLQAGSDHVLKLMKRHYTLQEYKDLITSLRS 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 +L++ + I GFP ET+EDF+ L+ ++E + F YS EG A + DQVPE Sbjct: 291 RIKDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHIHAFPYSIREGTPAATMADQVPE 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 VK+ R L Q + ++G+ ++I++ + +G + I+G V Sbjct: 351 AVKKTRVALLNGLSQSGYERYAKSRIGKPGEILIEKEENGYYMGLTNEY---INGKV--K 405 Query: 414 GETNVKPGDILRVKVEHADEYDLW 437 + K GD++ V ++ L Sbjct: 406 SDGTRKIGDLVGGTVVGLEDNYLI 429 >UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MIAB_SYNFM Length = 456 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 120/460 (26%), Positives = 197/460 (42%), Gaps = 36/460 (7%) Query: 1 MSKVTPQPKI-GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 ++K P P+ + GC N DS+R L L GY DAD++ +NTC D A Sbjct: 5 LAKTAPAPRYLYVRTFGCQMNEYDSQRALRLLCAVGYRPTSDIADADVIFLNTCSVRDKA 64 Query: 60 VQESLEAIGEALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHV 113 Q+ +G K++V GC+ + + + V + G + + Sbjct: 65 EQKVYSFLGRLRRLKAHRPWLKIVVAGCVAQQLGDGLLKRFEHVDLVVGTRGIGSIASLL 124 Query: 114 HHYVPKPKHNPFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + L QG T A + I +GCN+ CT+CI+P +RG Sbjct: 125 EEVERSKRRVAHLPAEELQGFTTDKCRTVGTGDVVAQVTIMQGCNNFCTYCIVPHVRGRE 184 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 SR ++L E L G +E+L++ Q+ ++YG + P S L ++ Sbjct: 185 RSRAPDDILREIDFLASRGAREVLLLGQNVNSYGRGL----------PDPISFPDLLRRI 234 Query: 227 SKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 K R +P +D+I A + +L +P Q S ILKLM R + + Sbjct: 235 GKETSIRRVRFTTSHPKDLTEDLIECFAGLPFLCKHLHLPFQSGSDGILKLMHRGYTARQ 294 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 L +I + RE+CPE+ L + IVGFP E+EED+ L ++E R D + F+YS Sbjct: 295 YLEKIARLREVCPEIALSTDVIVGFPAESEEDYLQTLRLIEEVRFDSLFSFRYSDRPLTR 354 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSM 400 A PD+VP +VK R R +Q I+ ++ + G V+++ + GR+ Sbjct: 355 AAGFPDKVPMDVKVRRLARLQSIQADITLQKNLAETGTVREVLVEGPSKASNGQMTGRTQ 414 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + ++ G I+ V++ A + L G Sbjct: 415 QNR-----IINFQCPVDLT-GKIVPVRIVAAYSHSLKGEL 448 >UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavobacteriales RepID=C6WZM1_FLAB3 Length = 508 Score = 453 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 124/464 (26%), Positives = 203/464 (43%), Gaps = 29/464 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 K K+ S GC N DSE + + L +GY+ ++++AD++++NTC + A Q Sbjct: 42 EKPQNSKKLFLESYGCQMNFSDSEIVASILSKQGYNTTLNHEEADLILLNTCSIREKAEQ 101 Query: 62 ESLEAIGEALN-----ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHH 115 + + N N V V GC+ + + E V + GP +Y + + Sbjct: 102 TVRMRLSQFKNLKKERPNLTVGVLGCMAERLKTKFLEEEQLVDLVVGPDAYRDLPNLLKE 161 Query: 116 YVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSR 169 + E + P A++ I+ GC++ CTFC++P RG SR Sbjct: 162 TDSGRDAINVILSKDETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTRGRERSR 221 Query: 170 PIGEVLSEAKRLVDAGVKEILVISQDTSAY-----GVDVKHRTGFHNGEPVKTSMVSLCE 224 ++ E K L + G KEI ++ Q+ +Y G + + L E Sbjct: 222 DPHSIVEECKTLWENGYKEITLLGQNVDSYLWYGGGAKKDFKNASEMQQLTAIRFAQLLE 281 Query: 225 QLSKL--GIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSV 281 ++ + R P+ DV +MA I Y+ +P+Q S RIL+ M R + Sbjct: 282 MVAVAVPEMRIRFSTSNPHDMTVDVFEVMAKHDNICKYVHLPVQSGSDRILEKMNRQHTR 341 Query: 282 DRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEG 341 L I + +EI PE++ I+GF GETEED Q+ L ++E D F YS G Sbjct: 342 AEYLNLINRAKEIVPEISFSQDMIIGFCGETEEDHQLTLSLMREVEYDYGYMFAYSERPG 401 Query: 342 ADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIG 397 A+ + D VP +VK+ R + LQ ++S +R+Q GR V+I+ ++ G Sbjct: 402 TPAHRKMEDDVPADVKQRRLAEVIALQGELSRKRMQGYAGRMHEVLIEGTSKKNQNQWKG 461 Query: 398 RSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 R+ +A + + K GDI+ V V + L G+ V Sbjct: 462 RNSQNA-----VCVFDKLEDQKLGDIVTVFVHGNTQGTLLGTTV 500 >UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2J3_9BACT Length = 452 Score = 453 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 172/446 (38%), Positives = 245/446 (54%), Gaps = 23/446 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 + VSLGC KNLVD+E I L T G + D+AD+ ++NTC FI +A E+ EAI Sbjct: 15 LYLVSLGCSKNLVDTEVIAGTLLTSGRTLAFEPDEADLYVINTCAFIPAARDEAREAIED 74 Query: 69 ----EALNENGKVIVTGCLGAKEDQ--IREVHPKVLEITGPHSYEQVLEHVHH--YVPKP 120 + ++V GCL + +R+ +P+V TG + ++ + +P+ Sbjct: 75 GIVWKQEKPGRLLVVAGCLTEWDKDGSVRKEYPEVDLWTGVNQVAEIARLLDRQSTLPEN 134 Query: 121 KHNPFLSLVP-EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 P ++LT H AYLKI++GCN+RCT+C IP +RG L +RP+ V+ EA+ Sbjct: 135 AEEPVYLYDDCTPRLQLTLPHLAYLKIADGCNNRCTYCSIPGIRGRLRTRPMESVVREAR 194 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TRLHY 237 L++ GV+E+LVI+QD + YG D + L L+ L RL Y Sbjct: 195 NLIEGGVRELLVIAQDITVYGNDRPESGDT---------LARLLTALNALEGNFVIRLLY 245 Query: 238 VYPYPHVDDVIPLMAEG--KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P + ++ I MA G K+LPYLDIPLQH S RILK M R + + + + RE Sbjct: 246 THPAHYTEEFIDFMARGNTKVLPYLDIPLQHISDRILKQMNRHVTRKQTEELLTKLRERI 305 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P LTLR+TFI GFPGETEE++Q L F K+ + +R G F YSP A A PDQVP E+ Sbjct: 306 PGLTLRTTFITGFPGETEEEYQELKSFAKKFKFERCGVFPYSPEPRTPAAAFPDQVPAEL 365 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 E+R M+ Q I + + +VG+ + V++D+VDE GA+ R DAPEID +Y+ Sbjct: 366 AEQRSTELMKQQISIMKKLSKNQVGKTVRVLVDDVDENGAVARGAMDAPEIDNVIYIPKP 425 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 +KPG VK+ D DL V Sbjct: 426 KRLKPGKFCLVKITGTDGCDLIAELV 451 >UniRef50_A6NW35 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW35_9BACE Length = 449 Score = 453 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 170/452 (37%), Positives = 256/452 (56%), Gaps = 24/452 (5%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 Q KI FVSLGC KNLV++E+++ R G+ VV + + AD+ ++NTCGFIDSA E Sbjct: 5 HAVNQYKIAFVSLGCAKNLVNTEQMMALCRDAGHQVVANPEGADVAVLNTCGFIDSAKSE 64 Query: 63 SLEAIGEALNEN-----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHY 116 +++ I E GK++VTGCL + ++ E P+V + G SY ++ V Sbjct: 65 AIDNILELAELKSKGTLGKLLVTGCLSQRYKDELMEEMPEVDGVLGTGSYTDIVPAVESV 124 Query: 117 VPKPKHNPFLSLV----PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + F + + TP + AYLKI+EGC++RC++CIIP +RG SR + Sbjct: 125 MEGDQPTFFGDIDHTVEDGARMVSTPAYTAYLKIAEGCDNRCSYCIIPYLRGRYRSRTME 184 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 +L+EAK L D GVKEI+VI+QD + YG D+ K + L ++L KL Sbjct: 185 SLLAEAKELADRGVKEIIVIAQDITRYGTDLYK----------KRMLGELLKELCKLPFH 234 Query: 232 WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W RLHY+YP DD+I ++A E KIL Y+DIPLQH + ++L+ M R G+ LA + + Sbjct: 235 WVRLHYLYPDELDDDLIDVIASEPKILKYIDIPLQHINDKLLRSMNRRGTKAEILALLDK 294 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R P L LR++ I G PGE EE+F+ L DFL+EA ++R G F++SP EG A +PDQ Sbjct: 295 LRARIPGLVLRTSLIAGLPGEGEEEFEELCDFLREAHIERAGIFQFSPEEGTPAAVMPDQ 354 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDG 408 V + R + LQ ++ + ++G + V+ + D + GRS AD+P++DG Sbjct: 355 VDPDTAARRVELLVDLQSRVMDAFNESRLGETLEVLCEGFDPDMGCYAGRSYADSPDVDG 414 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ V G + V++ ++ DL G Sbjct: 415 KVFFTAAGLVPAGTFVNVRITGTEDGDLMGEI 446 >UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA07_9FIRM Length = 448 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 169/454 (37%), Positives = 255/454 (56%), Gaps = 29/454 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 K+ ++LGCPKN VDSE I+ L +GY++V +D +I+NTC FI A++ES+ Sbjct: 3 NNMKKVFVLTLGCPKNTVDSENIMYLLSKQGYEIVDDATVSDYIIINTCTFIHDAMEESI 62 Query: 65 EAIGEAL-----NENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 +I EA K+IVTGCL + ++E P+V G + + + + Sbjct: 63 NSILEATLVKKDRSEVKIIVTGCLAQRYSKDLKEEIPEVDAFVGTGEFYNMDKIIKSMET 122 Query: 119 KPKHNPFL-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + + TP H+AYLK+SEGC+ CT+C+IPS+RG SR I Sbjct: 123 EESDEVIVKVDNIDCPIFETDRTLTTPSHFAYLKVSEGCDKHCTYCVIPSIRGKQRSRKI 182 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG- 230 +++SEAKRL D GVKE+++I+QD YG D+ + + L E+L+K+ Sbjct: 183 EDIVSEAKRLADRGVKELILIAQDVGEYGTDLYG----------ERKLPELLEELNKIES 232 Query: 231 -IWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W R+ Y+YP D++I K+L Y+D+PLQH + ILK M R S + L I Sbjct: 233 IHWIRVLYIYPETVSDELIDKFVNLDKVLKYIDMPLQHINDNILKKMGRKTSKEDILTLI 292 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ R + +RSTFI FPGETEE+ + LL+F+K +LDRVG FKYS EG A + Sbjct: 293 RKLRSKVNGIKIRSTFITAFPGETEENHKELLEFIKLYQLDRVGFFKYSREEGTPAYDMD 352 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPE 405 +QV EE+K+ER+ M Q+ +S E ++ + + + V+I+E E+ IGRS D PE Sbjct: 353 NQVSEEIKDERYMELMSAQEDVSEELMESYLDKTLEVLIEEKVEDEDNVYIGRSYMDCPE 412 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 IDG VY+ + ++ G+ + +E + EYDL G Sbjct: 413 IDGEVYVYADKPLEIGNFYDIVIEDSMEYDLIGR 446 >UniRef50_A0L887 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Magnetococcus sp. MC-1 RepID=RIMO_MAGSM Length = 487 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 169/452 (37%), Positives = 256/452 (56%), Gaps = 25/452 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + +G +SLGC KN VDSE++L EGY +V +AD+++VNTCGFI A +ES Sbjct: 33 ANAKGTVGVISLGCSKNTVDSEQMLGRFVREGYLLVADPLEADLLVVNTCGFIADAERES 92 Query: 64 LEAIGEALN-----ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYV 117 E+I E + + K+IVTGCL + ++ E HP++ + G Y+ ++ + Sbjct: 93 RESIDEMAHIKQLYPHKKLIVTGCLSQRYGAKLLEDHPQIDLLLGAGHYDTLIPLLEAKA 152 Query: 118 PKPKHNPFLSL----VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 P+ + + T AY+KI+EGCN+ CTFCIIP +RG SR + + Sbjct: 153 PQTVDHVTEPDAAASHDVPRLITTGESSAYVKIAEGCNNSCTFCIIPKLRGPFRSRTLDD 212 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK--LGI 231 + +E L D G E++++SQDT+ YG D+ P ++S+ L +++ Sbjct: 213 IAAEVALLTDEGCHELILVSQDTTWYGRDL----------PQRSSLTELLQRILASCEAP 262 Query: 232 WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W R+ Y+YP +++ L+A E ++LPY DIPLQHA ++LK M+R ++ +K Sbjct: 263 WIRMLYLYPTLVKKELLQLIAREDRLLPYFDIPLQHADSQVLKRMQRSERLETVRQLVKD 322 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R P+ LRSTFIVGFPGE+E +FQ LLDF++E++LD VG F YS +G A LPD+ Sbjct: 323 VRASVPDAILRSTFIVGFPGESEAEFQTLLDFIQESQLDWVGVFTYSDEQGTAAYDLPDK 382 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDG 408 V V E R ++ M LQQ I++ RLQ VG + V+++ DEE +GR A APE+DG Sbjct: 383 VDARVAEARRDQLMALQQPITSARLQRWVGEIVAVLVESYDEEHACFVGRFWAQAPEVDG 442 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + ++ G + V + YDL+G Sbjct: 443 QVLIQCNEELEMGIFVPVAITQVLGYDLYGDL 474 >UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2I9_SPHTD Length = 460 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 120/447 (26%), Positives = 208/447 (46%), Gaps = 26/447 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 V + ++GC N +S + L GY ++AD++IVN+C +A + Sbjct: 17 VQAAKRYCIWTIGCQMNEAESAKAAAMLSQAGYLQTHLEEEADVIIVNSCVVRQAAEDKV 76 Query: 64 LEAIG-----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYV 117 +G + + + ++ +TGC+ ++Q + E P V GP +E+++E Sbjct: 77 AGKLGSLARLKRVRPDVRIALTGCMVTGQEQALAERFPHVDLFYGPSQFERLVEIAPELA 136 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 L + + A++ I GCN C++CI+P RG SRP+ EV++E Sbjct: 137 HVDTDLAELPHFYQPDAAGSDVT-AFVPIIYGCNFVCSYCIVPYRRGRERSRPMAEVIAE 195 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHY 237 +RL + GVKE+ ++ Q +AYG D+ + L ++++ R+ + Sbjct: 196 VERLAERGVKEVTLLGQTVNAYGHDLPGSP----------DLADLLTAVNEIPGIERIRF 245 Query: 238 V--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + +P D ++ +A K ++++P+Q +L+ M+R +VD RI RE Sbjct: 246 LTSHPKYMSDRIVQAVATLPKACEHINLPVQAGDDEVLRRMRRTYTVDFYRERIAYIRET 305 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P +T+ + IVGFPGETEE FQ LD L E RLD+V YSP + D +P + Sbjct: 306 IPGVTVSTDIIVGFPGETEEQFQRTLDLLAELRLDKVHVAMYSPRPRTLSARWEDDIPWD 365 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K R +LQ QI ER + +G +++D + + GR+ + V+ Sbjct: 366 EKRRRHQAVEKLQAQILGERNRGYLGATFEILVDGMAKGRWRGRTRGND-----LVFFEA 420 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + K G + V++ A + L G V Sbjct: 421 PGDWK-GKFVDVRITEASPWYLLGEPV 446 >UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6H1_ACIC5 Length = 512 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 174/494 (35%), Positives = 253/494 (51%), Gaps = 65/494 (13%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + +P+IGFVSLGCPKNLVDSE ++ L G + AD+++VNTC FID+A Q Sbjct: 13 AADSARPRIGFVSLGCPKNLVDSEVMMGLLDRAGGVMTQDAASADILVVNTCSFIDAAKQ 72 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ I E K+IV GCL + D+I++ P+V + G E+VLE Sbjct: 73 ESVDTILEMAQHKTTGRAQKLIVAGCLVERYRDEIQKNIPEVDAVVGTGELEKVLEAAGL 132 Query: 116 YVP----------------------------------------KPKHNPFLSLVPEQGVK 135 +P +L ++ Sbjct: 133 ALPPAPAASDSPFTILSAGVAARPEGELREQQGRFDREQWDGATAALPQYLYDHTTPRLR 192 Query: 136 LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQD 195 T AY+KI+EGC+H C+FC+IP++RG SR V++EA+ LV GV+EI +I QD Sbjct: 193 ATRSASAYIKIAEGCDHPCSFCVIPNLRGKFRSRRFESVVAEAQSLVAQGVREITLIGQD 252 Query: 196 TSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIPLMA- 252 T+ YG D+ +K + L E+L+++ W R Y YP ++ +A Sbjct: 253 TTCYGEDLG----------LKDGLALLLERLAQIEGLLWLRFLYAYPNKITGKLLDTIAK 302 Query: 253 EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGET 312 I YLD+PLQHAS +LK MKR + + L I++ R P L LR++FIVGFPGET Sbjct: 303 HDNICKYLDVPLQHASGAVLKSMKRGANAEILLKTIEKARARVPGLVLRTSFIVGFPGET 362 Query: 313 EEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISA 372 EDF L F+++A++D +G F YS EG+ A L ++P E+R M+ QQ IS Sbjct: 363 AEDFATLQQFVRDAQIDWLGVFTYSDEEGSKAFDLEGKLPRRTIEQRKRALMKQQQGISR 422 Query: 373 ERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNG---ETNVKPGDILRV 426 Q+ VGR + V+++ EE GR+ APEIDG VYLN ++ PG R Sbjct: 423 RAKQQWVGRVVDVLVEGESEETPLLWQGRTAWHAPEIDGVVYLNDFGPFESLTPGRFYRC 482 Query: 427 KVEHADEYDLWGSR 440 ++ A +YD+ Sbjct: 483 EITEAHDYDVVARV 496 >UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO n=56 Tax=cellular organisms RepID=RIMO_SYNR3 Length = 487 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 168/449 (37%), Positives = 248/449 (55%), Gaps = 24/449 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 +P + F LGC KN VD+E +L L GY V DA +V+VNTC FI A ES+ Sbjct: 37 RPTVAFAHLGCEKNRVDTEHMLGLLAQAGYGVSADEADAQVVVVNTCSFIQDARAESVRT 96 Query: 67 IGEALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN-- 123 + + + ++++ GCL ++++ E P+ I G Y+ ++E + + N Sbjct: 97 LVDLAEQGKQIVIAGCLAQHFQEELLESLPEARAIVGTGDYQHIVEVLEQVEAGERVNRV 156 Query: 124 ----PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F++ + T AYLK++EGC++RC FCIIP +RGD SRPI +++EA+ Sbjct: 157 SQVPTFVADENLPRYRTTSEAVAYLKVAEGCDYRCAFCIIPKLRGDQRSRPIESIVAEAQ 216 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTRLHYV 238 +L GVKE+++ISQ T+ YG+D+ K + L L ++ I W R+HY Sbjct: 217 QLAAQGVKELILISQITTNYGLDLYG----------KPQLAELLRALGEVEIPWIRVHYA 266 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP +V+ E +LPYLD+PLQH+ P +L+ M RP +++ RE P+ Sbjct: 267 YPTGLTPEVLAAYREVPNVLPYLDLPLQHSHPEVLRAMNRPWQEGVNGQLLQRIREQLPD 326 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 LR+TFIVG+PGETEE F+ LL+F++E R D VG F +SP +G A LP+ VP EV E Sbjct: 327 AVLRTTFIVGYPGETEEQFEHLLEFVQEQRFDHVGVFCFSPEDGTPAADLPNAVPAEVAE 386 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVII--DEVDEEGAIGRSMADAPEIDGAVYLN-- 413 R R M+ QQ ISAER VGR + V++ + IGR + AP++DG V + Sbjct: 387 ARRGRLMEAQQAISAERNGAWVGRIVDVLVEQENPSSGELIGRCLRFAPDVDGEVRIRAG 446 Query: 414 -GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ V++ AD YDL G V Sbjct: 447 SHGAAASAGTMVPVRITAADIYDLEGEVV 475 >UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Coriobacteriaceae RepID=C8WHJ1_EGGLE Length = 459 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 122/462 (26%), Positives = 207/462 (44%), Gaps = 33/462 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + GC N DSERI L G V + +DAD+V TC ++A Sbjct: 1 MHTPFTNLTFCIRTFGCQMNKHDSERIAGMLEGMGALQVDAIEDADVVAFMTCCVREAAD 60 Query: 61 QESLEAIGEALN---------ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVL 110 + N V V GC+G ++ + + + + + G H+ + Sbjct: 61 TRLYGQVASLKNVPLRAGTPLSKRIVAVGGCIGQRDGEKLVDELKHLDVVFGTHNLGSLP 120 Query: 111 EHVHHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGD 165 + + + H + P A+L I+ GCN+ C++CI+P +RG Sbjct: 121 RLLEAALEEGSHQVEVLDAASSFPTELPTAREHEWAAWLPITIGCNNFCSYCIVPYVRGR 180 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 SRP+ ++++EA+R V AGVKEI ++ Q+ ++YG D+ + + Sbjct: 181 EKSRPLEDIVAEAERYVAAGVKEITLLGQNVNSYGRDLYGSP----------RFAQVLDA 230 Query: 226 LSKLGI-WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDR 283 L + GI R +P D+V+ A + ++P L +P+Q S +L M R + D Sbjct: 231 LDQTGIERLRFATSHPKDLNDEVVGRFATLRSLMPALHLPVQSGSDAVLAAMNRRYTRDH 290 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 A + + R+ P++ L + IVGFPGET +DF+ + E +V F YS EG Sbjct: 291 YRALVAKLRDAVPDIALSTDIIVGFPGETAKDFEDTYRLVDEVGYHQVFTFIYSKREGTP 350 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADA 403 A ++ D P EV ++R++R + L QQ + E Q +G + V+++ + R +A Sbjct: 351 AASMDDDTPREVIQQRFDRLVDLVQQRAFEANQRDLGSTVDVLVEGASKRDE--RLLAGK 408 Query: 404 PEIDGAVYLNGETNVK----PGDILRVKVEHADEYDLWGSRV 441 + V+ V+ G +RV+V+ A + L G V Sbjct: 409 SPKNQTVHAPAPAGVRAEDLAGSTVRVRVDEAKTWYLAGEIV 450 >UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=20 Tax=cellular organisms RepID=MIAB_PROM3 Length = 480 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 110/458 (24%), Positives = 199/458 (43%), Gaps = 27/458 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + Q + GC N DSER+ L GY P+ +AD+V+ NTC D+A Q Sbjct: 23 TTAQHQGSFWIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQ 82 Query: 62 ESLEAIGEALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHH 115 + +G K++V GC+ +E + + P++ + GP ++ + Sbjct: 83 KVYSYLGRQARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQ 142 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHY---AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + + R A++ + GCN RCT+C++PS+RG SR Sbjct: 143 VDNGQQVVATDDNHILEDLTTARRDSTICAWVNVIYGCNERCTYCVVPSVRGKEQSRSPE 202 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 + E + L G +EI ++ Q+ AYG D+ T + ++ L + + Sbjct: 203 AIRLEIEGLAARGFREITLLGQNIDAYGRDLPGITPEGRRQN---TLTDLLHHIHDVEGI 259 Query: 233 TRLHYV--YPYPHVDDVIPL-MAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R+ + +P + +I K+ + IP Q +LK M R +V+R + Sbjct: 260 ERIRFATSHPRYFTERLIEACFDLPKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVN 319 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + RE+ P+ + + IV FPGET+ FQ L+ ++E D+V YSP A + Sbjct: 320 RIRELMPDAAISTDVIVAFPGETDAQFQNTLNLVEEVGFDQVNTAAYSPRPNTPAATWSN 379 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEI 406 Q+PE VK ER + L ++++ +R G+ V+ + ++ + +GR+ + Sbjct: 380 QLPEVVKVERLKQLNALVERVALQRNSRYSGKVEQVLAEGINPKKPQQLMGRTRTNR--- 436 Query: 407 DGAVYLNGETN----VKPGDILRVKVEHADEYDLWGSR 440 + E PGD++ V++ + L G+ Sbjct: 437 --LTFFAAEGPQSCRYSPGDLVDVQINSVRAFSLSGTP 472 >UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKJ7_CALS8 Length = 434 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 127/448 (28%), Positives = 219/448 (48%), Gaps = 29/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI F +LGC N +++ I GY++V +AD+ ++NTC + + ++S +AI Sbjct: 1 MKIAFYTLGCKVNQYETQAIAETFERLGYEIVDFDQEADIYVINTCTVTNVSDRKSRQAI 60 Query: 68 GEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 A + V+V GC Q + V I G E+++E+V Y+ + K Sbjct: 61 KRAKKTSPDSIVVVMGCYPQVYPQEVQKIEGVDIIVGTRDREKIVEYVTEYLKQKKKILA 120 Query: 126 LSLVPEQG-------VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ ++ R A++KI EGC C++CIIP RG +VSR + +L E Sbjct: 121 VNNEYKRDTFEELKISSFNERTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSLSSILDEV 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 +RL G KE ++ + SAYG D+ + K ++V + E++SK+ RL Sbjct: 181 QRLASNGYKEFVITGINISAYGKDLDY----------KVTLVDVIEEISKIEKVRRIRLS 230 Query: 237 YVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P +D I L+ K+ +L + LQ S +ILKLM R + D ++ R Sbjct: 231 SLEPIVMKEDFIKRLVKIEKLCHHLHLSLQSGSDKILKLMNRHYTTDEYRQIVEMVRGYW 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 ++ + IVGFPGE++EDF+ ++F+KE R+ F++SP +G +A +P QV Sbjct: 291 NDVAFTTDIIVGFPGESDEDFERTVEFVKEIGFSRIHVFRFSPKKGTNAYNMPYQVNSAE 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAVYLN 413 KE+R + +++S ++ G+ + V+I+E E G S + Sbjct: 351 KEKRSEILKSVARKLSFGFHKKFEGKIVDVLIEENSSLEGYFEGYSGNYI-----RTLVP 405 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 +++ G+I +VKV+ A E + G + Sbjct: 406 KTESIRVGEIYKVKVKEAFEQYVIGDII 433 >UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RIMO_ACIBL Length = 504 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 183/498 (36%), Positives = 262/498 (52%), Gaps = 72/498 (14%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T K+GFVSLGCPKNLVDSE ++ L T G ++ +DAD+++VNTC FID+A QES+ Sbjct: 16 TKPKKVGFVSLGCPKNLVDSEVMMGLLATNGAEITARAEDADIIVVNTCSFIDTAKQESV 75 Query: 65 EAIGEALNENG-----KVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEH------ 112 + I E K+IV GCL + +I++ P+V + G E +L Sbjct: 76 DTILEMAGHKATGRAQKLIVAGCLVERYRNEIQKNIPEVDAVVGTGELEAILAASGIEPR 135 Query: 113 -----------------------VHHYVPKPKHNP------------------FLSLVPE 131 + +L Sbjct: 136 KSEANSPFVILNSTSASQQLKSGIADRPEGAAREEAGRFARTDWDGAVADLPNYLYDENT 195 Query: 132 QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILV 191 V TP++ AY+K++EGC+H C+FCIIP +RG SR V++EA+RL GVKEI + Sbjct: 196 PRVLATPKYMAYIKVAEGCDHPCSFCIIPQLRGKFRSRRFESVVAEAERLAKQGVKEITL 255 Query: 192 ISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIP 249 I QDT+ YG D+ +K + L E+L+++ W R Y YP ++ Sbjct: 256 IGQDTTCYGEDLG----------LKDGLAQLLERLAQIEELQWVRFLYAYPNKITKRLLQ 305 Query: 250 LMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGF 308 +A+ KI Y+D+PLQH++ +LK MKR D L I++ R + P+LTLR++FIVGF Sbjct: 306 TIADNPKIPKYMDVPLQHSAANVLKRMKRGAHGDIFLKSIEEMRRVIPDLTLRTSFIVGF 365 Query: 309 PGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQ 368 PGETEEDF L +F+K A++D +G F YS EGA A AL ++VP E R + M LQ+ Sbjct: 366 PGETEEDFNQLCEFVKAAQIDWLGVFSYSDEEGAKAFALDEKVPPREIERRRKKLMSLQK 425 Query: 369 QISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNG---ETNVKPGD 422 QIS ++ + +GRE VI++ EE GR+ APEIDG VY+N NV+PG Sbjct: 426 QISKKKRKALIGREFDVILEGPSEETDLLWEGRTAMHAPEIDGKVYINDFAEHENVEPGQ 485 Query: 423 ILRVKVEHADEYDLWGSR 440 + R ++ A +YDL Sbjct: 486 VFRCEITEAHDYDLVARL 503 >UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBM1_FUSMR Length = 445 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 182/452 (40%), Positives = 260/452 (57%), Gaps = 29/452 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ +SLGC KNLVDSE L L + + ++ +AD+VIVNTCGFI A +ES+E Sbjct: 1 MKLALISLGCSKNLVDSEHYLGILSKRKEMELTSELSEADIVIVNTCGFIGDAKEESIET 60 Query: 67 IGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I E K+IV GCL K ++I + P+V + G +++ + V + Sbjct: 61 ILEVSEFKETGNLKKLIVAGCLAQKYSEEILKELPEVDAVIGTGDIDKIEKVVDEILENK 120 Query: 121 KHNP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K FL+ + V T H AYLKISEGCN CT+CIIP MRG L SR I +++ Sbjct: 121 KVVETKNMTFLANANTERVLTTASHTAYLKISEGCNRACTYCIIPQMRGRLRSRSIEDIV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 EAKRLV +GV+EI +++Q+T+ YG+D+ + +L ++L K+ W Sbjct: 181 EEAKRLVASGVREINLLAQETTEYGIDLYGD----------KKLAALMKELCKIEGLKWL 230 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +Y++P D++I +M E KI Y D+P+QH S IL+ M R S ++ + + R Sbjct: 231 RTYYMHPEYVTDELIEVMKSEEKICKYFDVPIQHVSDNILRNMARAKSGEQVKDVLNRIR 290 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + PE T+R+T IVGFPGETEE+FQ L+D+++E D G FKYS E A LP+QVP Sbjct: 291 KAIPEATIRTTLIVGFPGETEENFQELMDYVREFEFDYAGVFKYSREEDTVAYNLPNQVP 350 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGA 409 EE+KE+R+ + LQ +I+ + + +G EI V+ID V E GR+ A EIDG Sbjct: 351 EEIKEKRYAELVNLQSEIAERKNRRLLGEEIEVMIDGVSSESEYLLEGRTRGQALEIDGK 410 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V L + KPG+I++VK E EYD G V Sbjct: 411 V-LTTDGTAKPGEIVKVKFEQNFEYDFVGPIV 441 >UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT Length = 480 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 171/483 (35%), Positives = 263/483 (54%), Gaps = 48/483 (9%) Query: 1 MSKVTPQ-PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 MS T K+G +SLGC KNLVD+E +L + ++G + + D+AD++IVNTC FIDSA Sbjct: 1 MSTKTATPKKVGMISLGCAKNLVDAEIMLGGVLSKGMQITSNADEADVLIVNTCAFIDSA 60 Query: 60 VQESLEAIGEA-------LNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLE 111 +ES+EAI EA ++IV+GC+ + ++ P+V G Sbjct: 61 KEESIEAILEAHESRGLKKRAGQRLIVSGCMAQRFAKELTHEMPEVDAFIGLDQVADAAG 120 Query: 112 HVHHYVPKP---------------------------KHNPFLSLVPEQGVKLTPRHYAYL 144 + +P + ++ +LTP H A+ Sbjct: 121 IIEQVFSRPAAPVPAAKAKAPDVLLDEQWEPLNLVTRKPVYIPDYDTPRFRLTPAHTAFT 180 Query: 145 KISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVK 204 KI+EGCNH C+FC+IP MRG SR I V++E + LV GVKEI +ISQDT+ +G+D+ Sbjct: 181 KIAEGCNHPCSFCVIPQMRGKHRSRTIESVVAEVRSLVAEGVKEINLISQDTTYFGMDLW 240 Query: 205 HRTGFHNGEPVKTS---MVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILP 258 + + ++ L +L K+ W RL Y +P D++I +AE K+ Sbjct: 241 EEKAGPRQQVDSSRGPTLIKLLRELDKIEGDFWIRLLYTHPAHWSDELIACIAECKKVCR 300 Query: 259 YLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQM 318 Y+D+PLQH PR+L+LM+R S + I + R P + +R+TFIVGFPGET+E+F Sbjct: 301 YIDMPLQHIHPRMLELMRRETSSEHIENLIARIRAGIPGIAIRTTFIVGFPGETDEEFNY 360 Query: 319 LLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEK 378 LLDF++ R +R+G F YS EG+ A + DQVP++VK R+ R M+LQQ+I+ E + + Sbjct: 361 LLDFIERTRFERLGVFTYSQEEGSRAAKMDDQVPQKVKAARYKRAMKLQQKIAREISETQ 420 Query: 379 VGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 VG+ + ++D+ + R+ ADAP+IDG + L+ G+ + V++ YDL G Sbjct: 421 VGQRVRAVVDQP----LVARAAADAPDIDGRILLSSP--APVGEFIDVEITGTQVYDLVG 474 Query: 439 SRV 441 + Sbjct: 475 DPI 477 >UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Acidobacteria RepID=RIMO_SOLUE Length = 465 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 165/450 (36%), Positives = 247/450 (54%), Gaps = 27/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+GF+SLGCPKNLVDSE ++ +L +G+++ D AD+++VNTC FID A +ES++ I Sbjct: 1 MKVGFISLGCPKNLVDSEVMMGQLVAKGHELTSHPDQADVLVVNTCSFIDPAKKESVDTI 60 Query: 68 GEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK-P 120 E K+IV GCL + IR P+V + G + + +++ P Sbjct: 61 LEMAEYKKIGRAKKLIVAGCLVERYRGDIRTEMPEVDALIGTNELDSIVDICEGMPPSTN 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P+L V TPRH+AY+KI+EGC+H CTFC+IP RG SR V+SEA R Sbjct: 121 PLEPYLYHDLTPRVLATPRHFAYMKIAEGCDHPCTFCVIPQYRGAFRSRRFESVVSEATR 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG----IWTRLH 236 L G++EI +I QDT+ YG D+ +K + L +L+++ W R Sbjct: 181 LFQQGIREINLIGQDTTCYGEDLG----------LKDGLAELLARLAQIETPQEKWIRFL 230 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP ++ +AE + Y+D+PLQHAS +LK MKR S D L I++ R Sbjct: 231 YAYPNKVTQKLLDTLAEHAALAKYIDMPLQHASANVLKRMKRGASGDIFLKLIERIRRTI 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + +R++FIVGFPGET DF L F++ A+ D +G F YS + + + AL +V Sbjct: 291 PGVAIRTSFIVGFPGETAADFDELCAFVEAAKFDNLGVFTYSDEDTSASYALDGKVDGRT 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYL 412 + R R M +Q++I+ R + VG+E+ V++ V E R APEIDG + Sbjct: 351 IQNRKRRLMAIQRKIARARNRGLVGKEVPVLVSGVSGETDLLWEARMSTQAPEIDGVTLI 410 Query: 413 NGETNVKP--GDILRVKVEHADEYDLWGSR 440 N +P G+I R+++ A +YD+ G+ Sbjct: 411 NDFEGSEPRAGEIRRLRITEAHDYDVVGTL 440 >UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Verrucomicrobia RepID=RIMO_OPITP Length = 471 Score = 450 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 165/460 (35%), Positives = 245/460 (53%), Gaps = 34/460 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ +SLGC KNLVDSE ++ L G V+P + AD+VIVNTC FIDS+ +ES+ Sbjct: 1 MIKVSLISLGCAKNLVDSEIMVGHLHQAGMAVIPEAEKADVVIVNTCSFIDSSKEESIGH 60 Query: 67 IG--------EALNENGKVIVTGCLGAKEDQIREV--HPKVLEITGPHSYEQVLEHVHHY 116 I + K+IV GC+ + + H +V G +V + Sbjct: 61 ILEVHQHRGLRKRRKEQKLIVAGCMSQRFSKDLSSSLHDEVDAFIGLDQVTKVAPIIQEI 120 Query: 117 VPKPK------------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRG 164 + + + F+ +LTP+H+AY+KI+EGCNH CTFCIIP +RG Sbjct: 121 YARERTKTDDPVSFVEGRSTFIPDYDTPRFRLTPKHFAYVKIAEGCNHPCTFCIIPQIRG 180 Query: 165 DLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS---MVS 221 SR + V++E ++LV GVKEI +ISQDT+ +G+D + + + Sbjct: 181 RHRSRTVESVVAEVRQLVREGVKEINLISQDTTFFGMDTWEQRPNPRTPVDSGRGTALTT 240 Query: 222 LCEQLSKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRP 278 L QL+ + W RL Y +P D++I +AE K+ Y+DIPLQH S +L M+R Sbjct: 241 LLRQLNAIEGDFWIRLLYTHPAHWSDELIRTIAECPKVARYIDIPLQHISDAMLSRMQRE 300 Query: 279 GSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSP 338 S I + R P + +R+TFIVGFPGET+ D L F+ E + +R+G F+YS Sbjct: 301 TSGGYIRDLIARIRAGIPGIAVRTTFIVGFPGETDADVDELCAFISETKFERLGVFRYSQ 360 Query: 339 VEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGR 398 +G A +P+Q+ + KE RW+R M LQ+QI+A+ + VGR + V+++E + R Sbjct: 361 EDGTRAAKMPEQLSAKTKEARWHRTMALQKQIAADVSKTYVGRTLRVLVEEPG----VAR 416 Query: 399 SMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 ADAP+IDG VY+ + G+ V V +YDL Sbjct: 417 GEADAPDIDGRVYVP--RELPVGEFADVTVTGYHDYDLLA 454 >UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=18 Tax=Clostridia RepID=MIAB_ALKMQ Length = 476 Score = 449 bits (1156), Expect = e-125, Method: Composition-based stats. Identities = 117/458 (25%), Positives = 211/458 (46%), Gaps = 35/458 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + K V+ GC N DSE++ L+ GY ++A+++I NTC ++A Sbjct: 33 ERTGKRKKHLTVTYGCQMNEHDSEKLAGILQNIGYIETNDKNEANLIIYNTCCVRENAEL 92 Query: 62 ESLEAIGEALNENGK-----VIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHV 113 + IG N + + V GC+ + +I+ + V + G H+ + E + Sbjct: 93 KVYGNIGSLKNLKKEKHDLTIAVCGCMMQQPHVVKEIKSKYRHVDLVFGTHNLHKFPELL 152 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + V+ P A++ I GCN+ CT+CI+P RG S Sbjct: 153 STSMESDNMIIDVWDKEGDIVEGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRERS 212 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 R + E++ E + L G KEI ++ Q+ ++YG ++ +T +L + L+K Sbjct: 213 REVQEIIDEVEELAKNGTKEITLLGQNVNSYGKTLEE----------ETDFGNLLKVLNK 262 Query: 229 LGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ ++ +P D +I M K+ +L +P Q S ILK M R + + L Sbjct: 263 IEGIERIRFMTSHPKDLSDSLISAMTVCTKVCAHLHLPFQAGSNDILKAMNRKYTKEAYL 322 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 +++ R P + L + IVGFPGETE+DF+ L+ +++AR + + YS + A Sbjct: 323 ELVEKVRSKVPNVALTTDIIVGFPGETEDDFKETLNVVEKARFNSAYTYLYSLRQETPAA 382 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMAD 402 + + VP++VK ER+NR ++ +IS E + + + + V+++ + +GR+ Sbjct: 383 KMENHVPDDVKHERFNRLIEAVNRISGEINKAYLNKVVEVLVEGTSKTDDAKLMGRTPQS 442 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V G G I+RVK+ + L G Sbjct: 443 K-----LVNFAGNKE-DIGQIVRVKITEPKTFSLNGEL 474 >UniRef50_B1I695 MiaB-like tRNA modifying enzyme n=6 Tax=Clostridia RepID=B1I695_DESAP Length = 450 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 117/455 (25%), Positives = 193/455 (42%), Gaps = 38/455 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F +LGC N +++ + R GY V+P + AD+ +VNTC ++S + Sbjct: 1 MKKVAFYTLGCKVNQAETQGLAALFRDRGYKVIPFEETADVYVVNTCTVTREGDRKSRQV 60 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY-------- 116 + A N V+VTGC + P V + G E++++ V Sbjct: 61 VRRAVRANPEALVVVTGCYAQVAPEEAGAIPGVSLVIGTSGRERIVDLVEQAAARCPVPA 120 Query: 117 --------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + G R A++K+ EGC CT+CI+P RG L S Sbjct: 121 EKKGPGPFLAVGDIEQAREFEDLPGTADPGRTRAFIKVQEGCRDFCTYCIVPYARGPLRS 180 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP VL A+ LVD G E+++ + AYG D+ ++ L +L + Sbjct: 181 RPPERVLELARGLVDRGYSELVLTGVNLGAYGRDLGT-----------ENLPGLVRRLVR 229 Query: 229 LGI--WTRLHYVYPYPHVDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQL 285 + RL V P +++ +AE + P+ IPLQ S +L M R S Sbjct: 230 IPGLARLRLSSVEPNEITRELVEAVAENPVCAPHFHIPLQSGSDSVLSRMGRRYSTGEFT 289 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 + R PE+ + + +VGFPGET + + L++++ + F YSP G A Sbjct: 290 GLVDMVRARVPEVAVTADVMVGFPGETAAEHRESLEYVRRIGFAGLHVFVYSPRRGTPAA 349 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE 405 + PD VP VK+ER + L +++ GR + V+++ V A G + Sbjct: 350 SFPDPVPYRVKKERSREMLALGRELRDRFASRYRGRTVEVLVESVSGGVASGYTPNYL-- 407 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ + G I++V + A++ +L G Sbjct: 408 ---RVFFKNGPEL-AGRIVKVYADGAEQGNLRGII 438 >UniRef50_B6GBU3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBU3_9ACTN Length = 453 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 28/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE----- 62 + GC NL DSER+ L + G DAD+VI TC ++A Sbjct: 10 KTYFIRTFGCQMNLHDSERVSGLLDSLGCLQALDPKDADIVIFMTCCVREAADTRLYGQC 69 Query: 63 -SLEAIGEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S +++ + + V V GC+ ++ + + V I G HS V + + Sbjct: 70 SSCKSLPASPSGRRVVAVGGCIAQRDGEGLLTNLDNVDVIFGTHSIAHVGDLLADAFADG 129 Query: 121 KHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + + P H A++ I GCN+ C++CI+P +RG SRP+ E++ Sbjct: 130 DRHVRVEEIDSGAATEMPWHRETAYHAWVPIMTGCNNFCSYCIVPYVRGREKSRPMEEIV 189 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTR 234 E LV GV+ + ++ Q+ ++YG D L ++ + G+ Sbjct: 190 DEVTGLVRQGVRSVTLLGQNVNSYGRDHGSAP----------RFAELLRRVGETGVERIY 239 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +P + + I +AE ++P L + +Q S RILKLM R + ++ L + + R+ Sbjct: 240 FTSSHPKDLLPETIDAIAEVPAVMPQLHLAVQSGSSRILKLMNRKYTREQYLDLVDRVRD 299 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P++ L + IVGFPGETEEDF+ + + EA+ + F YS G A + D P Sbjct: 300 RIPDIALTTDIIVGFPGETEEDFEQTVTLVDEAKFAQAFTFIYSKRAGTPAAEIDDPTPR 359 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAV 410 V ++R++R ++ + + + Q +G + ++I+ ++ G+S + + V Sbjct: 360 SVIQQRFDRLVRHVETTAFDYNQRFLGTTVPMLIEGTSKKNDAVLQGKSPWNQT-VHCPV 418 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 + G IL V+V+ A + L G Sbjct: 419 PEGMDARQLIGKILDVRVDAARTWYLSG 446 >UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESPS Length = 447 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 132/454 (29%), Positives = 206/454 (45%), Gaps = 28/454 (6%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 Q + GC NL DSE I L GY AD+V++NTC A Q+ + Sbjct: 2 EQRSFFIKTYGCQMNLRDSEIIAQILNNNGYVETSEIGGADLVLLNTCSIRAKAEQKVMS 61 Query: 66 AIGEALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 +GE ++ V GC+ +E + I+ P V + G + E + + Sbjct: 62 KLGELRRNKKINPRMQICVAGCVAQQEGKQIQAKMPHVDLVIGTQYIYAINELLERSRTE 121 Query: 120 PKHNPFLSLVPEQGVKLTPRHYA---------YLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + P ++ I +GCN+ CT+C++P RG VSR Sbjct: 122 GPITATNLDDKYVIPQFIPETTGKEHEGEFRKFVTIMQGCNNFCTYCVVPYTRGREVSRS 181 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +++ E LV +G+KEI ++ Q+ ++Y +T + + L Q++ + Sbjct: 182 IKDIVEEITVLVKSGIKEITLLGQNVNSY-----AQTNTVTEDDTPATFSDLLRQVAAVE 236 Query: 231 IWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL + P +D++ + + P +P+Q S ++LK M R +V+ L Sbjct: 237 GLKRLRFTTSNPKDLSNDLMQCFKDLDVLCPQFHLPVQAGSNKVLKEMGRKYTVESYLDL 296 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + Q RE CPE+ + + IVGFPGET+E+F+ + L+ R FKYS G AN L Sbjct: 297 VTQLRENCPEIAITTDIIVGFPGETDEEFEETMKMLETVRYHGSFSFKYSDRPGTKANEL 356 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 ++V E VK R RF Q +I ER QE +G V+I+E+ + GR + Sbjct: 357 TNKVDESVKSARLARFQARQDEIGLERNQEYIGTTQEVLIEELRDGEIKGRMGTN----- 411 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V+ G TN KPGD L V A ++ L GS V Sbjct: 412 HIVHAIGLTNKKPGDFLMAHVTAAGQHSLRGSIV 445 >UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSZ3_9BACE Length = 471 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 119/454 (26%), Positives = 208/454 (45%), Gaps = 35/454 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 P + GC +N DSERI L+ GY +A ++++NTC + A Q L Sbjct: 32 KAPLAFVDTYGCQQNEADSERIRGYLKEMGYGFTQDEKEAAVIVINTCAIREHAEQRVLG 91 Query: 66 AIG-----EALNENGKVIVTGCLGAK---EDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 +G + N N + + GC+ + +IR + V + GPH+ + E ++ + Sbjct: 92 NVGALVHTKRKNPNQIICLCGCMVQEPHNAAKIRTSYRHVDMVFGPHALWRFPEFLYRIL 151 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + P + P A++ I GCN+ C++CI+P +RG SR Sbjct: 152 TRRGRIFETADDPGSIAEGIPVVRQNGVKAWVSIMYGCNNFCSYCIVPYVRGRERSRDPE 211 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW 232 +L+E + L AG KEI ++ Q+ ++YG D+ P L +++ + Sbjct: 212 GILAEVEELAKAGYKEITLLGQNVNSYGKDL----------PEPMDFADLLRKVNAVPGD 261 Query: 233 --TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 R +P + + MAE K+ P + +P+Q + R+LK M R + + L +++ Sbjct: 262 FLIRFMTSHPKDATEKLFDAMAECEKVAPVIHLPVQAGNNRVLKAMNRVYTREIYLEKVR 321 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 Q R+ P++ L S IVGFPGET E+F+ + L+E D + F YSP EG A +PD Sbjct: 322 QLRQRIPDIVLTSDIIVGFPGETTEEFEDTMSLLREVEYDALFTFIYSPREGTPAAKMPD 381 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEI 406 + +E K + R + LQ +IS ++ Q G+ I ++D ++ R+ Sbjct: 382 PMSKEEKSANFQRLVDLQNEISLKKHQAYEGKTIRCLVDGRSDDPRNNLTARTPGGR--- 438 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ G+ + G + + + L+G Sbjct: 439 --LVHFTGDEKL-IGTYQNLTITGCSTWALFGEL 469 >UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP71_9BACT Length = 461 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 122/461 (26%), Positives = 212/461 (45%), Gaps = 36/461 (7%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + ++ + GC N DSE++ + LR GY +V + DAD+V++NTC D A Q+++ Sbjct: 7 STMNRVYIKTYGCQMNERDSEQVASSLRDRGYSIVDTEYDADVVLLNTCSVRDQAEQKAI 66 Query: 65 EAIGEALNENGK-----VIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 G + V GC+ + ++ + P + + G + +V +H+ + + Sbjct: 67 GKAGYLKKHKKDNPNFLIGVMGCMAQNRGAELFDRLPDLDLVVGTQKFHRVPDHLDNMIQ 126 Query: 119 -----KPKHNPFLSLVPEQGVKLTPR--------HYAYLKISEGCNHRCTFCIIPSMRGD 165 P+ + L L E G + T R A++ I +GCN C FCI+P RG Sbjct: 127 SMNGQGPRPSSVLDLGEEAGSQNTIRDHIGKKGQVQAFVSIMQGCNMNCAFCIVPKTRGR 186 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 +RPI E++ E L ++GVKEI ++ Q ++YG K+ V L E+ Sbjct: 187 ERARPIQEIVDEVIGLAESGVKEITLLGQIVTSYGR------RDFPVVNGKSPFVQLLEK 240 Query: 226 LSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVD 282 + ++ R+ + P+P D++ + K+ Y+ +PLQ + L+ M RP + + Sbjct: 241 IEEIPGIERIRFTSPHPRGFKQDLVEAYRDLSKLCEYVHLPLQAGCNKTLRAMNRPYTKE 300 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 R + R + P + + IVGFPGETE DF + D FKYS G Sbjct: 301 RYREIVDSLRAMVPSMYFSTDIIVGFPGETEADFNETAAMFDDIAFDMAYIFKYSIRTGT 360 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSM 400 A +PDQ+P+E KE R + L + S R + VG V+++ ++G +G + Sbjct: 361 PAETMPDQIPQEEKERRNQVLLDLLHKHSLARNEGLVGTTEQVLVEGPAKKGDKYVGHTR 420 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 I + + G ++ +K++ A ++G V Sbjct: 421 GWRNAI-----FDANERL-VGQLVDLKIDRATASTVYGDLV 455 >UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y777_9FIRM Length = 460 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 168/448 (37%), Positives = 248/448 (55%), Gaps = 24/448 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 K KIG VSLGC KNLVDSER++ LR G+++V +A+ +IVNTCGFI+ A + Sbjct: 15 EKKGINMKIGVVSLGCCKNLVDSERMMGLLRQSGHEIVSDVHEAEAIIVNTCGFIEPAKE 74 Query: 62 ESLEAIGEALNEN----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHY 116 E++ I E K+IV GCL + + P+V Y ++ + + Sbjct: 75 EAINTILEMAEYKNENCRKLIVAGCLAQRYKADLEAEMPEVDCFLTISDYPKMGQILTRV 134 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + + T AYLKI+EGC++RC++C IP +RG VS PI ++++ Sbjct: 135 LGEK---VLDGYGKNTRLVSTKPWTAYLKIAEGCDNRCSYCAIPGIRGGYVSFPIEDLVA 191 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 EAK+L GVKE++VI+QDTS YG D+ R + L +L+ + W R Sbjct: 192 EAKQLASEGVKELVVIAQDTSRYGTDLYGR----------RRIWDLLTELNAIDGLHWIR 241 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y+YP D+ + + + K++PY DIP+QH S ++LKLM R GSV+ L +K RE Sbjct: 242 VLYLYPDEIDDEFVTGIKDLKKVIPYFDIPVQHGSDKMLKLMNRRGSVESILRTVKLIRE 301 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 LR+T IVGFP ETEEDFQML+DF+KE R DR+G F +S E A + Q+ + Sbjct: 302 NYDMPVLRTTMIVGFPQETEEDFQMLIDFIKEVRWDRLGAFTFSNEEDTPAYTMDGQISQ 361 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPE-IDGAV 410 E+ +ER R M +Q QI+ E + +G+ + V+++ D GR + AP+ IDG + Sbjct: 362 EIMDERLERLMTVQNQIAQENGEALIGKTLEVLVENQDGLTGYYHGRGIHSAPDGIDGLI 421 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 + +PG VKV A +DL G Sbjct: 422 KFKSSHHYQPGTFAWVKVTKAKHHDLIG 449 >UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWN1_9PLAN Length = 465 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 181/456 (39%), Positives = 271/456 (59%), Gaps = 30/456 (6%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + FVSLGCPKNLVDSER+L L+ +GYD+V D AD V+VNTCGFI+ A ES + Sbjct: 15 AKGTYSFVSLGCPKNLVDSERMLGLLKLDGYDLVAEPDGADFVVVNTCGFIERARTESFQ 74 Query: 66 AIGEALNENGK-----VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEH------- 112 AI E L + VIV+GCL ++ + + E P + + G EQ+ + Sbjct: 75 AIDEMLELKKQGRTKGVIVSGCLAERQKEQLLEDRPGIDCLVGVFGREQITQVADRLLGS 134 Query: 113 VHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + P +L +++TPRH+AYLKISEGC+ CTFC IP MRG ++P+ Sbjct: 135 LEEQRSVFQPAPIRALSDTDRLRITPRHFAYLKISEGCDRLCTFCAIPKMRGKHATKPME 194 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 EVL EA++L GVKE+++++QDT+ YG+D+ + + L ++ K+ Sbjct: 195 EVLKEARQLAADGVKELVIVAQDTTYYGIDLYG----------EPRLAELLREIEKVEGI 244 Query: 232 -WTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RL Y YP D++I ++A+ KI+PY+D+PLQH + +L+ M R + +IK Sbjct: 245 QWIRLMYFYPMYITDELIDVIAKSEKIVPYIDMPLQHINDTMLRRMSRRVTRAETELQIK 304 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + RE P LTLR+TFI GFPGET+E ++ L +FL+E + +R+G F YS A LPD Sbjct: 305 KLREAIPNLTLRTTFITGFPGETQEQYEELREFLREQKFERMGVFTYSFEPDTPAANLPD 364 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRSMADAPEI 406 + EEVK ER M +QQ+++ + ++ + + VI+D E ++ IGRSMADAP++ Sbjct: 365 HLSEEVKNERREALMAVQQELAFAWNEAQIDKVMPVILDQSVEGEKNVWIGRSMADAPDV 424 Query: 407 DGAVYLNGET-NVKPGDILRVKVEHADEYDLWGSRV 441 DG V++ G + GDI+ V++ + +YDL G V Sbjct: 425 DGLVFVTGHKYRLHAGDIVDVQIVTSQQYDLVGIAV 460 >UniRef50_Q0AXI3 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RIMO_SYNWW Length = 439 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 167/447 (37%), Positives = 259/447 (57%), Gaps = 25/447 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 IGF+SLGC KN VD+E ++ L+ G+ +V S + AD+V+VNTCGFI A +ES+EAI Sbjct: 1 MNIGFISLGCSKNRVDTEVMMAALKKAGHRIVNSLERADLVVVNTCGFITPAKEESIEAI 60 Query: 68 GEALNENGK-----VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E K +I GCL + ++ P++ + G S + V+ + Sbjct: 61 IETAELKKKGSLQFLIAAGCLSQRYGRELLLEIPELDGVFGISSVSSIAGVVNRIAQGER 120 Query: 122 H-----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 P + TP AYLKISEGCN+ C++C+IPS+RG L SR I E+L+ Sbjct: 121 VCFTEATPTEYFEKGHRILTTPPGSAYLKISEGCNNSCSYCVIPSIRGKLRSRQINELLN 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 EA +L+ G+KE+++++QDTSAYG D+ ++ ++ +L +LSKL W R Sbjct: 181 EAAQLLKMGIKELVLVAQDTSAYGHDISPQS----------ALPTLLRELSKLDGLEWIR 230 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y++P DD+I ++A E K+LPYLDIP+QHAS +ILKLM R I + R Sbjct: 231 LMYLHPLYLSDDIIDVVAYENKVLPYLDIPIQHASSKILKLMHRRHDNSHLRTMISKLRA 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P LTLR+T ++GFPGE E+DF L +F+ E++ D +G F + P EG+ A LP+Q+ + Sbjct: 291 RIPNLTLRTTVMLGFPGEEEKDFAELYEFVAESQFDWLGAFSFVPEEGSKAALLPNQIED 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-DEEGAIGRSMADAPEIDGAVYL 412 E+K ER ++ ++LQQ+I+ ++ ++ + V+I + +GR+ APE+DG + Sbjct: 351 EIKAERKDKILRLQQKITRQKNLARINTQEKVLISSQLSKNLFVGRTYFQAPEVDGLTLV 410 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGS 439 + + GD + V++ YD+ G Sbjct: 411 KTDFKLTKGDFVDVQLVGVRNYDMIGE 437 >UniRef50_B5EE49 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Geobacter RepID=MIAB_GEOBB Length = 441 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 107/455 (23%), Positives = 202/455 (44%), Gaps = 33/455 (7%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + K+ + GC N+ DSE+I+T ++ GY DAD+V++NTC +A Q Sbjct: 1 MNQAKKLYLETFGCQMNVSDSEKIVTLMKGMGYQQTQDPVDADLVLLNTCSIRATAEQRV 60 Query: 64 LEAIGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYV 117 +G+ + V GC+ +E + + + P V + G H+ + V Sbjct: 61 YGHLGKFKSIKKTKPGLIIGVGGCVAQQEGEKLLKKAPFVNLVFGTHNLHLLQGMVAAAE 120 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYA------YLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + L E+ L P A ++ + +GC++ C +CI+P +RG +SR Sbjct: 121 EGKRSSQTDFLDDEKRFDLFPHSEAEGGVTRFVTVMQGCDNFCAYCIVPHVRGREISRSA 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +V+ E + L D+GV E+ ++ Q+ ++Y + +P + L ++++ Sbjct: 181 AKVVEEVRALADSGVTEVTLLGQNVNSY----------CSKQPGEPDFPDLLRLVAQVDG 230 Query: 232 WTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + +P +I A+ K+ P++ +P Q S R+L+ M R + + LA++ Sbjct: 231 IERIRFTTSHPKDMSPRLIECFADLPKLAPHIHLPAQSGSDRVLERMNRGYTAQQYLAKV 290 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 +E CP + IVGFPGE E FQ + +++ + + F YS G A Sbjct: 291 AALKEACPAIQFTGDMIVGFPGEDEAAFQDTMALMEQVQYADLFSFIYSARPGTKAAEYA 350 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEI 406 D K+ R R Q++ + R + G V+++ + + GR+ + Sbjct: 351 DDATRAEKQGRLERLQAAQKKTTLARNRSLEGTVQKVLVEGLSSTGDSLFGRTGGNR--- 407 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + G+ ++ G +L VK+ + L G V Sbjct: 408 --GTVMAGDPSL-AGRVLDVKIVEGLQTLLKGEIV 439 >UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESOH Length = 466 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 111/463 (23%), Positives = 199/463 (42%), Gaps = 39/463 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + ++GC N+ DS ++ L G+ V + + AD+V VNTC A Q++ Sbjct: 1 MKRFYIHTIGCQMNVYDSSQLSAILTAMGHRSVNAPEQADLVFVNTCTIRAKAKQKATSF 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + V V GCL +E Q+ + P V + G H+ ++ H+ + Sbjct: 61 VGRLAAMKRARPDMIVGVGGCLAQEEGRQLLDAFPCVDIVFGTHALGRLPGHIQAVAHQG 120 Query: 121 KHNPFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + + + ++ I GC++ CT+C++P +RG SR Sbjct: 121 DRIVDVEMTAAIDESVHALQGPDSSGVTGFITIMRGCDNFCTYCVVPYVRGRETSRAPEH 180 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 +L E + V G++EI ++ Q+ ++YG + S L +++++ Sbjct: 181 ILDEIRARVAGGLREITLLGQNVNSYGQ-----------KEGLCSFADLLARVNEIDGLH 229 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R +P ++ K+ ++ +P Q S +LK M R + L ++ Sbjct: 230 RIRFTTSHPKDLSPELAAAFTSLDKLCSHVHLPAQSGSDAVLKRMNRRYTRQAYLEKLHW 289 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE P + L + IVGFPGETE+DF LD +++ R D + F YS A A A + Sbjct: 290 LREAQPGMALSTDIIVGFPGETEQDFLQTLDLIEKVRYDSIFAFMYSDRPLAPARAFDGK 349 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-----------GAIGRS 399 V E K++R ++LQ +I+AE+ + GR V+++ + GR+ Sbjct: 350 VDEAEKQQRIYALLELQNRITAEKNRALEGRVEQVLVEGKSKSSGRNDITADTVQWTGRT 409 Query: 400 MADAPEIDGAVY-LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + L V PG ++RV++ + L G V Sbjct: 410 TCNRVANFTVPRELASGNAVGPGAMVRVEIMSGLAHSLSGIAV 452 >UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=191 Tax=cellular organisms RepID=MIAB_BEII9 Length = 510 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 125/458 (27%), Positives = 207/458 (45%), Gaps = 39/458 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ S GC N+ D+ER+ L EGY + +DAD+VI+NTC + A ++ + Sbjct: 34 RKLFVKSYGCQMNVYDAERMADLLAPEGYAETSAPEDADLVILNTCHIREHAAEKVFSEL 93 Query: 68 GEALNENG---------KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY- 116 G+ K++V GC+ E ++I V + GP SY ++ + + Sbjct: 94 GKLRLLKAEQQAAGRPVKIVVAGCVAQAEGEEILRRQKAVDLVVGPQSYHRLPDLLRRVA 153 Query: 117 -------VPKPKHNPFLSLV-PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 P + F LV P+ A++ + EGC+ C+FC++P RG S Sbjct: 154 HTPGLVDTEFPAEDKFDHLVAPQPEKIAERGVGAFVTVQEGCDKFCSFCVVPYTRGAETS 213 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP+ +L+E + L+ +GV+E+ +I Q+ +AY GF S+ SL +++ Sbjct: 214 RPVEAILAEVETLIASGVREVTLIGQNVNAY-------HGFDAMTGAPASLASLMARVAA 266 Query: 229 LGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + R+ Y +P +D+I + ++P+L +P+Q S +IL M R L Sbjct: 267 MPGLLRIRYTTSHPNDMGEDLIAAHRDIPALMPFLHLPVQSGSDKILAAMNRRHKAGDYL 326 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 I R P++ L S FIVGFPGETE DF+ L +++ FKYS G Sbjct: 327 ELIASIRAARPDIALSSDFIVGFPGETEADFEATLALIEQVGFASAFSFKYSQRPGTPGA 386 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD--- 402 PDQ+ E+VK +R R L ++ + +GR + V+ ++ GR Sbjct: 387 DRPDQIDEDVKAQRLARLQALLEEQRQAFNKAMIGRVLPVLFEKP------GRHPGQIAG 440 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 A+Y G+ + G + V++ A G Sbjct: 441 KTPYLQALYAEGDKAL-IGTVQPVEILEAGPNSFHGRL 477 >UniRef50_C7RHT5 RNA modification enzyme, MiaB family n=3 Tax=Anaerococcus RepID=C7RHT5_ANAPD Length = 449 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 111/454 (24%), Positives = 201/454 (44%), Gaps = 35/454 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + GC N DSERI L GY AD ++ NTC ++A + Sbjct: 12 KGKTYNITTFGCQMNEHDSERISYILEDLGYTKTEDRSSADFILFNTCLVRENAELKLYG 71 Query: 66 AIGEALN-----ENGKVIVTGCLGA---KEDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 + + V+GC+ + I + H +V I G + +++ + Y+ Sbjct: 72 QVSSLKKLKKEHPEKIIAVSGCMMQTSTAREVIIKDHKEVDIIFGTKNINSLVDLIFRYL 131 Query: 118 PKPKHNPFLSLVPEQG----VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + +S + A++ I GC++ C++CI+P RG SR Sbjct: 132 ETNERVIDISTDDVKDDYVNYNTLNDFQAFVNIMTGCDNFCSYCIVPESRGREESRRPSA 191 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWT 233 +L+E + LV+ G KEI ++ Q+ ++YG N + L E++S++ Sbjct: 192 ILAEVEHLVEEGYKEITLLGQNVNSYG----------NKADFDMTFPELLEKISQIEGLK 241 Query: 234 RLHYV--YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 RL + +P D++I ++ I Y +PLQ S ++LK M R ++ + R K+ Sbjct: 242 RLRFTTSHPKDLSDELIEVIKNNDNICNYFHLPLQSGSSKVLKDMNRKYDQEKYIERAKK 301 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE P + + + IVG+P ETEEDF+ L +E D FKYSP A L Sbjct: 302 LREEIPGIAISTDIIVGYPTETEEDFKETLKVCREIEFDSAFTFKYSPRPKTRAAKLTP- 360 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEID 407 + +E+ ++R++R + I E+ +E +G+ + V+++ + GR+ + Sbjct: 361 IDDEIVQDRFDRLLDTIYPIFNEKNKEYIGKTVEVLLESESKNNPDILTGRT-----DTF 415 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V++ + G+I++VK+ + + G V Sbjct: 416 KLVHVKASKKL-IGEIVKVKITDNTSFTISGELV 448 >UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Bacteroidales RepID=MIAB_PORG3 Length = 465 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 115/461 (24%), Positives = 202/461 (43%), Gaps = 36/461 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 ++ + K+ + GC N+ DSE + + ++ +GY + + D+AD ++VNTC D+A Q Sbjct: 12 AENKQERKLYIETYGCQMNVADSEVVASVMQMDGYSLTDNVDEADTILVNTCSVRDNAEQ 71 Query: 62 ESLEAIGEALNENGK--------VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHV 113 + L + + K + V GC+ + + V + GP SY + V Sbjct: 72 KVLNRLAYYHSLRKKRRASSRLVIGVLGCMAERVKEELIREHHVDVVAGPDSYLDLPNLV 131 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 K + E + P ++ I GCN+ C++CI+P RG Sbjct: 132 GAAEQGEKAINVELSMQETYKDVMPLKMGGVHINGFVSIMRGCNNFCSYCIVPYTRGRER 191 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR I +L+E + L +E+ ++ Q+ ++Y + R L ++ Sbjct: 192 SREIESILNEVRDLKAKNFREVTLLGQNVNSYRYEQNGRI---------IRFPDLLAAVA 242 Query: 228 KL--GIWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQ 284 + + R +P D+ I +MA + I ++ +P Q S ++L++MKR + Sbjct: 243 EAVPDMRIRFTSPHPKDMDDEAIAVMARYRNICNHIHLPAQSGSDKMLRVMKRGYTRRWY 302 Query: 285 LARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADA 344 L R+ R P+ + S GF ETEEDF+ L ++E D FKYS G A Sbjct: 303 LDRVAAIRRAIPDCAISSDLFCGFHSETEEDFEATLSLMEEVGYDSAFMFKYSERPGTYA 362 Query: 345 NA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSM 400 L D V EEVK R +R + LQ ++S E + + + V+I+ + E GR+ Sbjct: 363 ARHLVDDVLEEVKLARLDRMIALQNRLSEESNKRDISKTFEVLIEGFSKRSREQLFGRTQ 422 Query: 401 ADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + V + + + G + V+++ A L+G V Sbjct: 423 QN------KVVIFDKNGHRVGQYIYVRIKDASSATLFGEVV 457 >UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=RIMO_ALKOO Length = 438 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 154/444 (34%), Positives = 250/444 (56%), Gaps = 22/444 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 +GF+SLGC KNLV +E I+ ++ +++V +DA+++++NTCGFI+SA QE++ I Sbjct: 1 MNVGFISLGCSKNLVVTEEIIGLFKSNHFNIVNKKEDAEIIVINTCGFIESAKQEAINTI 60 Query: 68 GEALNEN----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E +IV GCL + ++ + P+V Y+Q+ + + + + + Sbjct: 61 LEMAKLKNNKCKYLIVAGCLVQRYKKELEKAIPEVDLFISISEYKQIWKEIENLL-DLET 119 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 +L V T + AYLKI EGC++ CT+C IP+++G +SR + ++L EA+ L Sbjct: 120 GKESNLDYHNRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYISRTMEDILKEARNLA 179 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYP 240 G+KE++VI+QDT+ YG+D+ + + L E+L K+ W R YVYP Sbjct: 180 KQGIKELIVIAQDTTKYGLDIYG----------EARLPQLLEELCKIEDIEWVRFLYVYP 229 Query: 241 YPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D++I ++ E KI Y DIP+QH S +LK M R I++ R P++ Sbjct: 230 ESITDELIKVVGENDKICNYFDIPIQHISDSVLKRMNRKSDGASVRNIIEKIRREIPDVI 289 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 +R+T IVGFPGETEEDF+ L +F++E + D++G F YS + A L +Q+ K+ R Sbjct: 290 IRTTLIVGFPGETEEDFKELYEFVEETKFDKLGVFAYSKEDNTPAAKLKEQIHHATKKSR 349 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVY-LNGET 416 + M LQ++IS E L++KVG V+I+ + G IGR+ D P++DG VY +N Sbjct: 350 LRKIMALQEKISRESLEQKVGNVYKVLIESRTKGGNYYIGRTYMDVPDMDGVVYIVNNTK 409 Query: 417 NVKPGDILRVKVEHADEYDLWGSR 440 + +++ A +YDL+G Sbjct: 410 ENLMNTFVDCRIQRAKDYDLFGEL 433 >UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Prevotella RepID=D1W9B3_9BACT Length = 497 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 114/453 (25%), Positives = 197/453 (43%), Gaps = 26/453 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N+ DSE + + ++ GY++ ++AD + +NTC ++A + Sbjct: 49 MKKLYIETYGCQMNVADSEVVASVMQMAGYEICDKEEEADAIFLNTCSVRENAENKIYNR 108 Query: 67 IGEALNENGK-----VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + E K + V GC+ + + + GP SY + + + K Sbjct: 109 LDSLHAERKKGRNLILGVLGCMAERVKDDLLDNHHTDLVCGPDSYLNLPDMIAQAETGNK 168 Query: 122 HNPFLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 E + P+ ++ I GCN+ C +CI+P RG SR + +L Sbjct: 169 AIDIELSKTETYKDVVPQRLLIGKIGGFVSIMRGCNNFCHYCIVPYTRGRERSRDVESIL 228 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT--SMVSLCEQLSKL--GI 231 E + L D KEI ++ Q+ ++Y + L +++ G+ Sbjct: 229 REVRDLRDKHCKEITLLGQNVNSYCFTIPEHLSATGETIPAETIDFPKLLRRVAHEVPGV 288 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R +P DD + ++AE + ++ +P+Q S +ILKLM R +V+ + RI Sbjct: 289 RIRFTSSHPKDMSDDTLRVIAEEPNVCKHIHLPVQSGSNKILKLMNRKYTVEWYMDRINA 348 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPD 349 R I P+ + + VG+ GETEED Q L ++ D FKYS G A+ LPD Sbjct: 349 IRRIIPDCGISTDMFVGYHGETEEDHQQSLVLMRTVGYDSAFMFKYSERPGTYASKHLPD 408 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPEI 406 VPEE K R N + LQ ++SA ++ G+ V+++ + E GR+ + + Sbjct: 409 DVPEEEKIRRLNEMIHLQTELSAVSNKKDEGKTFDVLVEGFSKRSREQLCGRTEQNKMVV 468 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 V N G+ +RV++ + L G Sbjct: 469 FDKV------NHHIGETVRVRIVGSTSATLLGE 495 >UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXK7_HALOH Length = 438 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 121/448 (27%), Positives = 206/448 (45%), Gaps = 25/448 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + F +LGC N ++E ++ GY VV D AD+ I+N+C + A ++S + Sbjct: 2 MNTVAFHTLGCKVNHYETEAMMGIFEEAGYKVVDFDDRADVYIINSCTVTNEAARKSRQL 61 Query: 67 IGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 +A +N + +V GC + + + G + +++ V K Sbjct: 62 ARKARRKNPEAVVALVGCYAQVSPDEVKKIDAIDLVLGSDRRKDIVKLVEEVRTGGKEVT 121 Query: 125 FLSL-------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + K+ AY+KI EGCN C++CIIP RG + SR V+ E Sbjct: 122 DVKDFKKLTTYEDLNINKVKETTRAYIKIEEGCNQFCSYCIIPYARGPVRSRKEESVIQE 181 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 +RLV AGVKEI++ AYG+D E ++V L + L K+ RL Sbjct: 182 VERLVRAGVKEIVLTGTHLGAYGLD----------ENNDKALVELIQNLVKVKGLARIRL 231 Query: 236 HYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + DD+I +M +E K+ P+L +PLQ S ILK MKRP +V+ + + R+I Sbjct: 232 SSLEVTEVNDDLIRIMGSEDKVCPHLHLPLQSGSNTILKKMKRPYTVEEFKETVDKIRKI 291 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 ++ + + IVGFPGE +++F + +KE R+ F +S +G A + +QVP + Sbjct: 292 IEDIAITTDIIVGFPGEGQKEFNESYNTVKELGFSRLHVFPFSIRQGTPAARMKNQVPGD 351 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 VK+E + +L +++ E + G VII+ D + + V + Sbjct: 352 VKKEYSKKMRELNKKLMLEYQKRFWGHLRDVIIE--DNRDSRTNLLTGVTGNYIKVMIEN 409 Query: 415 ETNVKPGDILRVKVEHADEY-DLWGSRV 441 + G + +V+++ A + G + Sbjct: 410 ADDSLRGKMCKVRLDKAYNHEYAIGKVI 437 >UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Clostridiales RepID=D1PL31_9FIRM Length = 447 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 110/450 (24%), Positives = 196/450 (43%), Gaps = 36/450 (8%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA 70 S GC +N+ D E+I L+ G+ + + +DAD+++ NTC + A Q IG Sbjct: 13 FVRSYGCQQNVNDGEKIRGVLQDVGFGICDTLEDADLILFNTCAVREHAEQRVFGNIGAL 72 Query: 71 L-----NENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 N + V GC+ + +++R+ +P V + G +++ + + + K Sbjct: 73 KKLKEQNPRLIIGVCGCMAQQPHIVEKLRQSYPYVDLVFGVDGIDRLPAMLAERLRRGKR 132 Query: 123 NPFLSL-----VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 V E ++ A+L I GC++ CT+CI+P +RG SR +L+E Sbjct: 133 YLETPEQRNAVVEEMPIRRDSGFRAWLPIMYGCDNFCTYCIVPYVRGRERSREPDAILAE 192 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TRL 235 + L+ G KEI ++ Q+ ++YG + L L + R Sbjct: 193 FRDLITKGYKEITLLGQNVNSYGKGLG----------NPIDFADLLNLLCAVPGDYQIRF 242 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P +I +A + + ++ +P+Q S R+L+ M R +V++ L + R Sbjct: 243 MTSHPKDASRKLIDTIAAQPHMCKHIHLPVQSGSNRLLQQMNRHYTVEQYLDLVDYARNK 302 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P +T S IVGFPGETEEDF+ L+ +++ ++ F YS G A +PD Sbjct: 303 IPGVTFSSDIIVGFPGETEEDFEATLELVRKVGYMQLFTFIYSKRNGTPAAKMPDPTTHA 362 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSM---ADAPEIDGAVY 411 K R R ++ Q +I+ + G+ + V+++ A GR+ + + V Sbjct: 363 EKAARMERLLRTQDEIAFAAIASMAGQNVRVLVE------AAGRTPGTVNGRLDNNLVVE 416 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + G RV + + L G V Sbjct: 417 FPAPE-MLIGQWARVNLTGSRAALLTGELV 445 >UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP61_9FIRM Length = 446 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 176/448 (39%), Positives = 246/448 (54%), Gaps = 27/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 I +SLGCPKN VD++ L EG+ V +AD++IVNTCGFI+SA E++E I Sbjct: 1 MNIAIISLGCPKNQVDADVFCHALLKEGHTTVADPAEADVIIVNTCGFIESAKAEAIENI 60 Query: 68 G-----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHH--YVPK 119 + N + KVIVTGCL + Q I + P+V + G S + V Sbjct: 61 LMACQYKQQNPDLKVIVTGCLAERYKQQIVQEIPEVDAVIGIGSNAAIPAIVARVCAAGA 120 Query: 120 PKHNPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + V TPRHYAYLKI+EGCN+RC +C IP +RG L SRPI + + Sbjct: 121 GQVESYGPKSDMPLGGARVISTPRHYAYLKIAEGCNNRCHYCAIPLIRGPLRSRPIEDCV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 +EA+ L GV+E+++++QD +AYG D ++ L ++L ++ W Sbjct: 181 AEARWLAGEGVRELILVAQDPTAYGEDWGK----------PGAVCELLDRLQQIDGIRWI 230 Query: 234 RLHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R+ Y YP D I M K++PYLD+P+QH +LK M R G I + R Sbjct: 231 RILYAYPERISDAFIAAMVRNTKVVPYLDLPIQHCDDAVLKAMNRRGGRADIEDAIARLR 290 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P +TLR+T I GFPGETEE + L DF+K R DR+GCF YS E A + Q+ Sbjct: 291 AAIPGITLRTTLIAGFPGETEEQYAELCDFVKTMRFDRLGCFAYSAEENTVAAKMDGQLD 350 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAV 410 EE K+ R + M+LQ ++SA+R +EKVG+ + I D VD+E + RS AD PEIDG V Sbjct: 351 EETKQRRADHIMELQAEVSADREKEKVGQTLECICDGVDDETGMYLLRSKADCPEIDGNV 410 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWG 438 +T ++ G V + AD YDL+G Sbjct: 411 LTPADTLLETGAFYNVTITDADTYDLYG 438 >UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Bacteria RepID=RIMO_DESAP Length = 450 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 175/446 (39%), Positives = 245/446 (54%), Gaps = 25/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 +I VSLGC KN VD E +L L GY + + AD+++VNTC FI A QES+EAI Sbjct: 11 RIALVSLGCDKNRVDGEVMLGLLERAGYQITAELE-ADIILVNTCAFIQDAKQESIEAIL 69 Query: 69 EALNENG-----KVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E G ++ TGCL + ++ P++ + G +V++ V + Sbjct: 70 ETARYRGNGRCRVLLATGCLAQRYPDELLRDIPELDGVVGTGEVGRVVDIVRRAATGERV 129 Query: 123 NP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 FL V AYLKISEGC++RC +C+IP +RG SR ++ E Sbjct: 130 REVGPPGFLGREVLPRVPSGSPFTAYLKISEGCDNRCLYCVIPQLRGPYRSREASVLVRE 189 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A+ L G +EI++++QDT+ YG D+K R TS+ L +L+ L W RL Sbjct: 190 ARALAARGAREIVLVAQDTTRYGSDLKER----------TSLTDLVSRLAALEGVAWIRL 239 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP +++ LMA E ++ YLDIPLQHAS R+L+ M R I R Sbjct: 240 LYCYPSGITFELVELMAREPRLCRYLDIPLQHASDRVLRRMGRSTMSYDLRKLILFLRSA 299 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P LT+RSTF+VGFPGETE DF+ LL FLK +LDR G F YS EG A +PDQVP E Sbjct: 300 IPGLTIRSTFMVGFPGETEADFEELLGFLKAMKLDRAGFFAYSREEGTPAARMPDQVPPE 359 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 VK ER R +Q+++S + +VG E+ V+++ E GRS ADAP+IDG V+L+ Sbjct: 360 VKRERLERAAAVQREVSRALNRARVGSEVTVLVEGRKGEQYYGRSEADAPDIDGRVFLSA 419 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 ++++PG +R ++ A YDL Sbjct: 420 ASDLEPGTFVRARITGAGPYDLRARV 445 >UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 n=2 Tax=environmental samples RepID=B3TCC0_9ARCH Length = 472 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 115/452 (25%), Positives = 207/452 (45%), Gaps = 30/452 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ + GC N+ D++R+ L GY +DAD+++VNTC + A Q++ Sbjct: 22 MKQVYLDTFGCQMNVADTDRMELVLFHSGYQRTLEKEDADLILVNTCSIREKAEQKTFSL 81 Query: 67 IG-----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 G + N + + +TGCLG +E + + + P + + GP E + + V Sbjct: 82 FGGLKPLKMANPDLILGLTGCLGQQEGEKLLKRMPYLDFVIGPDQVEGIAQAVDRVRNTG 141 Query: 121 KHNPFLSLVPE---------QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K + E + + P A++ I +GC+ CTFC++P RG SR Sbjct: 142 KTFVWTGFDQEKVYSIPELSRDLPKAPGPSAFVNIIKGCDKFCTFCVVPFTRGREKSREP 201 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 E+ E + LV+ G KEI+++ Q+ ++YG G L ++++ Sbjct: 202 EELFEEIRHLVNHGAKEIILLGQNVNSYGK---------RGLKKPVPFHELLYGIAEIPG 252 Query: 232 WTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 RL + +P D I + ++ +L +P+Q + ++LK M+R +++ L + Sbjct: 253 VQRLRFTTSHPNDFTRDTIRAYRDLDILMNHLHLPVQSGNNQMLKAMRRDHTIEEYLDLL 312 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + + P ++L + IVGFPGET+E F L ++E F YSP G AN L Sbjct: 313 AELKSEVPGISLSTDIIVGFPGETDEAFGDTLKIMEEVGYSSSFMFAYSPRPGTPANELS 372 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG 408 D VPEE K+ R + LQ + + ++ Q +G+ + V+I+ + G Sbjct: 373 DSVPEETKKRRLQEIIALQSRQTKQQGQSFIGKNVEVLIEGRSSKP--GYVYKGRNPQYW 430 Query: 409 AVYLNGETN-VKPGDILRVKVEHADEYDLWGS 439 V + G ++ G+ + V V+ + L G+ Sbjct: 431 NVNIQGGEGILQAGETVTVLVKQVSGHSLNGT 462 >UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNN8_9FIRM Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 117/446 (26%), Positives = 194/446 (43%), Gaps = 29/446 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ +LGC N ++E + + GY+VVP AD+ ++NTC ++S + I Sbjct: 1 MKVALTTLGCKVNQFETETMEGLFKQRGYEVVPFEARADVYVINTCSVTSLGDRKSRQII 60 Query: 68 GEALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP----- 120 A EN + V V GC + V + G ++++V + + Sbjct: 61 RRAHRENPQAIVAVCGCYAQVAPDEIKAIEGVRVVLGTKERAHIVDYVEKAMQEDGIQGT 120 Query: 121 --KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + R A+LKI +GC + C++CIIP RG + SR V EA Sbjct: 121 ITDIMKAKTFEDIPLYDSPERTRAFLKIEDGCQNFCSYCIIPYARGPVKSRLPEHVHREA 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 ++LV G KEI++ AYG D+ ++ C ++ + RL Sbjct: 181 EKLVAMGFKEIVLTGIHLGAYGRDLPGDI----------TLADACREVLSVPGLKRLRLG 230 Query: 237 YVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + ++ L+ E + +L +PLQ S ++LK M R I+ E Sbjct: 231 SLESIELSPELFALIREDERFCAHLHLPLQAGSDKVLKDMNRHYDTQEFARLIEHIEEEV 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + + IVGFPGETEEDF+ L F+++ R+ F YS G A A DQV E V Sbjct: 291 PGVAISTDIIVGFPGETEEDFEQGLSFVEKMNFARMHVFPYSRRTGTPAAARKDQVDEAV 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +R L + + E + +GRE+ V+ + + G + + + + Sbjct: 351 KKERVHRMQALADRKAEEFHRSFIGREMRVLFETAKDGITDGLTDNY-------IRVYTD 403 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 V G+I +V+++ +W V Sbjct: 404 EAVDCGEIYKVQIDKLWRDGVWAHCV 429 >UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Veillonellaceae RepID=D1BNC4_VEIPT Length = 448 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 166/452 (36%), Positives = 256/452 (56%), Gaps = 25/452 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+G+VSLGC KNLVD+E +L LR GY + +AD+++VNTC FI+ A ES+ I Sbjct: 3 KKLGYVSLGCAKNLVDTEVMLGLLRDNGYSITEDLSEADLIVVNTCTFIEKAKAESINTI 62 Query: 68 GEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 E +IV GCL + D++ + P++ + G +++QV+ V + Sbjct: 63 LEVAQYKEDGACKGLIVAGCLSQQYQDELFQEIPEIDALIGTGAWDQVMVAVDAIEHGNR 122 Query: 122 H-----NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + ++ TPR+ AY+KI+EGCN+ CTFCIIP +RG SR I + + Sbjct: 123 SCIMENITNIYDERMPRIQTTPRYSAYVKIAEGCNNGCTFCIIPKVRGAFRSRTIESIKA 182 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 E +RL GVKE+++I+QDT++YG+D+ + + + V E W R+ Sbjct: 183 EVERLAATGVKEVVLIAQDTTSYGIDLNNGKPLLTTLLKELTTVEGIE-------WIRML 235 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y+YP D+++ ++ E K+ Y+DIPLQH + ILK M R + +K+ R Sbjct: 236 YLYPTFFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDDRNDIERLLKKIRNAP 295 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 +TLR++ IVGFPGET+E F+ L DF+KE + D +G F YS G A A DQ+PEEV Sbjct: 296 THITLRTSIIVGFPGETDEQFEELCDFVKEIKFDNMGVFTYSQEAGTPAGAREDQIPEEV 355 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-----AIGRSMADAPEIDGAV 410 KEER++ M +Q IS E ++ G +++E++E A GR + AP++DG + Sbjct: 356 KEERYHVLMSIQAAISEENNRDLEGTIDYAMVEEIEEGENNTLLAKGRLKSQAPDVDGNM 415 Query: 411 YLNG-ETNVKPGDILRVKVEHADEYDLWGSRV 441 Y+ +++PGDIL+V+VE YD+ + V Sbjct: 416 YIEDCGEDIQPGDILKVQVEQGFAYDVVATVV 447 >UniRef50_A9A0B5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RIMO_DESOH Length = 440 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 155/448 (34%), Positives = 225/448 (50%), Gaps = 26/448 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ SLGC KN VDSE +L EG V AD+++VNTC FI+ AV E+++ I Sbjct: 1 MKVHLTSLGCAKNQVDSELMLGAFAAEGLTVCDDPAGADVLVVNTCAFIEDAVNEAVDTI 60 Query: 68 GEALNEN-----GKVIVTGCLGAKEDQIRE-VHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 ++IV GCL + + P+ G +Y +V+E V Sbjct: 61 LALARYKSEGSCRRLIVCGCLPERFGEELAGALPEADFFFGTGAYHRVIEAVAGKESTLS 120 Query: 122 HNPFLSLVPEQGVKLTPR------HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 R H Y+KI+EGC+ RCT+CIIP +RG SRP +++ Sbjct: 121 RCTLPPPDAVPMQAAADRRICATPHTVYVKIAEGCDRRCTYCIIPRLRGRQRSRPPADIV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWT 233 EA+ LV AG KE+++++Q+T+AYG D+ S+ SL LS IW Sbjct: 181 VEARGLVAAGAKELVLVAQETTAYGADLSP----------PVSLASLLMALSDAVGDIWV 230 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R+ Y++P D+I +M E + Y D+P+QHAS R+LK M R + R Sbjct: 231 RVLYMHPDTMDPDLIRVMTERDNLCSYFDVPVQHASDRVLKRMGRRHTAADLHRLFDDIR 290 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P+ LR+T +VGFPGE DF+ LLDF+ D +G F YS E ++ L V Sbjct: 291 RADPDAVLRTTVLVGFPGEKPADFEKLLDFITGVAFDHLGAFIYSDDEALSSHGLDGHVS 350 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVY 411 + R++R M Q IS+ RL ++VG V+++E E+G GR+ APE+DG V Sbjct: 351 SKTARHRYDRVMTAQIDISSRRLAKRVGSREPVLVEEKAEDGLFFGRAWFQAPEVDGDVC 410 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGS 439 +G + PGD + V++ A YDL G Sbjct: 411 FSGAGDYAPGDRVSVRITGASAYDLTGE 438 >UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridiales RepID=C7H7X5_9FIRM Length = 460 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 114/448 (25%), Positives = 207/448 (46%), Gaps = 34/448 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG-- 68 S GC +N+ D ERI L GY + +DAD+++ NTC + A Q +G Sbjct: 27 FVHSYGCQQNVNDGERIKGVLVDIGYGLCDKPEDADLILFNTCAVREHAEQRVFGNVGAL 86 Query: 69 ---EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + + + GC+ ++ +++R+ +P V + G + + + + + K K Sbjct: 87 KGLKEKKRGLMIGLCGCMANQKHVVEKLRKSYPYVDLVFGVDGIDTLPQLIAQKLQKHKR 146 Query: 123 NPFLS-----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 +V ++ A+L I GC++ CT+CI+P +RG SR G++L+E Sbjct: 147 VLMEPAQRPVIVENIPIRRESEFRAWLPIMYGCDNFCTYCIVPYVRGREKSRKPGDILAE 206 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TRL 235 + LV+AG KEI ++ Q+ ++YG ++ + L L + R Sbjct: 207 FRGLVEAGYKEITLLGQNVNSYGKGLEEQVD----------FADLLNLLCAVPGDYQIRF 256 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P +I +A + + +L +P+Q S +LK M R ++ + + I+ R+ Sbjct: 257 MTSHPKDASHKLIDTIAAQPHLCKHLHLPVQCGSDELLKKMNRHYTIGQYMELIEYARKK 316 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P +T S IVGFPGETEEDFQ L+ +K+ ++ F YS G A +PD P Sbjct: 317 VPGITFSSDIIVGFPGETEEDFQDTLELVKKVGYMQLFTFIYSKRTGTKAAEMPDPTPRA 376 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIID--EVDEEGAIGRSMADAPEIDGAVYL 412 K +R R +++Q +I+ + ++++VG+ + V+++ + GR + V Sbjct: 377 EKTDRMTRLLKVQDEIAMDLVRQQVGQTVRVLVEGYGRSDGTLSGRLDNNLT-----VEF 431 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSR 440 + + G +V + A L G Sbjct: 432 AADPAL-MGSYAQVHLTGARATVLLGEL 458 >UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZS6_9BACT Length = 447 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 122/456 (26%), Positives = 215/456 (47%), Gaps = 33/456 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + F + GC N +D+E L L+ +GY +V ++AD+++ NTC A Sbjct: 8 KNERQYKTVFFETFGCQMNKLDAELSLGLLQEDGYSIVDKVEEADVILYNTCSVRQHAED 67 Query: 62 ESLEAIG-----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHH 115 + +G + + + + V GC+ K+ Q I + P V + G + ++ E + Sbjct: 68 KVYSHLGALRTLKKKHPDVIIGVLGCMAQKDAQSIFKRMPHVDLVCGTRMFTRLPELLLK 127 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 H + VK + A++ + GC++ C++CI+P +RG VSR Sbjct: 128 IRNHGNHVLAVDEDEIVDVKRIAAYRPNVYQAFVTVMRGCDNYCSYCIVPYVRGREVSRT 187 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +V E LV G +EI ++ Q+ ++YG + ++ L +L+ + Sbjct: 188 IADVEREVLELVSNGCREITLLGQNINSYGKSLPGNI----------TLGDLLIELNGIE 237 Query: 231 IWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL +V +P D+I M++ K YL +P Q S RILK M R + Sbjct: 238 KLERLRFVTSHPKDMSRDLIRTMSQLDKACEYLHMPAQSGSDRILKKMHRGYTAGYYREL 297 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 I+ R++ P + + FIVGFPGETEEDFQ + +++ R FKYS G A L Sbjct: 298 IQYARDLMPTIKVAGDFIVGFPGETEEDFQETVCLMEDIRFQNSFIFKYSTRTGTKAAEL 357 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAP 404 D VP+E+K++R + LQ++IS E ++ +GR++ V+++ + GR+ + Sbjct: 358 TDDVPDEIKKKRNTTLLDLQKKISLEENKKLIGRKLQVLVEGASKSDPNKLSGRTRQN-- 415 Query: 405 EIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V G+ + G ++ + + A + L+G+ Sbjct: 416 ---NIVVFKGQPAL-VGTLVDITINEATDLTLFGTI 447 >UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bacteria RepID=YQEV_BACSU Length = 451 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 132/448 (29%), Positives = 207/448 (46%), Gaps = 25/448 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + F +LGC N ++E I + GY+ AD+ ++NTC ++ ++S + Sbjct: 1 MATVAFHTLGCKVNHYETEAIWQLFKEAGYERRDFEQTADVYVINTCTVTNTGDKKSRQV 60 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I A N +G + VTGC P V + G E++L ++ Y + + Sbjct: 61 IRRAIRQNPDGVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIDQYREERQPIN 120 Query: 125 FLSL-------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 +S T R A LKI EGCN+ CTFCIIP RG L SR EV+ + Sbjct: 121 GVSNIMKARVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLLRSRDPEEVIKQ 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS-KLGI--WTR 234 A++LVDAG KEI++ T YG D+K + L +L ++ R Sbjct: 181 AQQLVDAGYKEIVLTGIHTGGYGEDMKD-----------YNFAKLLSELDTRVEGVKRIR 229 Query: 235 LHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + + D+VI ++ KI+ +L IP+Q S +LK M+R +++ R+ + ++ Sbjct: 230 ISSIEASQITDEVIEVLDRSDKIVNHLHIPIQSGSNTVLKRMRRKYTMEFFADRLNKLKK 289 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P L + S IVGFPGETEE+F +F+KE + + F YS G A + DQV E Sbjct: 290 ALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSELHVFPYSKRTGTPAARMEDQVDE 349 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 VK ER +R + L Q++ E + + +I +E +E + V Sbjct: 350 NVKNERVHRLIALSDQLAKEYASQYENEVLEIIPEEAFKETEEENMFVGYTDNYMKVVFK 409 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ G I++VK+ A G V Sbjct: 410 GTEDM-IGKIVKVKILKAGYPYNEGQFV 436 >UniRef50_D2RJ51 RNA modification enzyme, MiaB family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJ51_ACIFE Length = 437 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 117/448 (26%), Positives = 196/448 (43%), Gaps = 24/448 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 KI F +LGC N D+ + R G+ +V + AD+ ++NTC + +S + Sbjct: 1 MKKIAFYTLGCKVNQSDTASMEKLFRDAGFQIVDFEEPADICLINTCVVTNMGQSKSRKI 60 Query: 67 IGEALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK----- 119 I A + K ++VTGC V I G +V+E V + + Sbjct: 61 IHRAARRDPKPLIVVTGCYPQTSPDEVVHIDGVDLIIGNQDRSKVVELVRERLGESPDEA 120 Query: 120 -----PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 R+ A+LKI EGC+ C +CIIP RG L SR + + Sbjct: 121 PINAVHDLPVGREFEELDAAVDASRNRAFLKIQEGCDQYCAYCIIPYARGHLRSRSLDNI 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 E +L KEI++I YG ++ + ++ R Sbjct: 181 REEVAKLTAEQYKEIVLIGIHLGCYGKEIPGGPHLSDAVKAA------LSAEPQVP-RLR 233 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + D ++ LMA E ++ +L +PLQ L M RP + +++ R Sbjct: 234 LGSLESVEVEDALLDLMAREPRLCAHLHLPLQAGCDSTLARMHRPYDTAKFAQLLEKIRS 293 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + P + + + IVGFPGETEEDFQ LDF+++ R ++ F YS +G A +PDQ+ Sbjct: 294 LVPNVAITTDVIVGFPGETEEDFQASLDFIRQCRFSKIHIFPYSQRKGTPAAVMPDQISN 353 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 + K+ER +R ++ ++ + +E++G+E V+ + ++ + VY + Sbjct: 354 QEKQERVHRLEEVDREGNLAYRKEQIGQESTVLWERRNKNNGL---WEGLTPGYVRVYAD 410 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 N+K G I V++E+ E L G + Sbjct: 411 SPENMK-GKISAVRLENLFEDGLKGGII 437 >UniRef50_B0TAE1 Miab-like tRNA modifying enzyme n=2 Tax=Clostridiales RepID=B0TAE1_HELMI Length = 446 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 111/430 (25%), Positives = 186/430 (43%), Gaps = 28/430 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P F +LGC N +++ I + GY +VP AD+ +VNTC + ++S +AI Sbjct: 6 PTAAFHTLGCKVNQGETDAIAGMFKARGYAIVPFDAPADVYVVNTCTVTHLSDRKSRQAI 65 Query: 68 GEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 +A N + V+VTGC + V + G +++ V + + Sbjct: 66 RKANRQNPDAVVVVTGCYAQTAADEVQAIEGVDIVVGTDRRSAIVDLVEEHRRSGETVNT 125 Query: 126 LSL-------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + R A +KI +GC+ CT+CIIP RG + SR I V+ EA Sbjct: 126 VYDSCRIERFEELPAAPERSRARATIKIQDGCDLYCTYCIIPYARGPVRSRRIESVVEEA 185 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 RL G KEI++ AYG D + L +L ++ R+ Sbjct: 186 TRLTGEGFKEIVLSGIHLGAYGSDFN------------ADLAKLIVELCRIPGLRRIRVG 233 Query: 237 YVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 V P +++ + ++ P+ IPLQ S +L+ M R L ++ +++ P Sbjct: 234 SVEPQEFTPELLEAVVHPRVCPHFHIPLQSGSDAVLERMGRRYRRQDFLDVTRKIQQMIP 293 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + + S IVGFPGE E D+ + + + L + F YSP G A PDQ+P VK Sbjct: 294 GVAITSDVIVGFPGEREADYLLSEELCRATGLAGLHVFPYSPRRGTPAATFPDQIPSAVK 353 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 +ER R +L ++++++ + VG+ V+ +E + G + V+ Sbjct: 354 QERAQRLAKLARELASDYAKGFVGQIREVLAEEQVDGVWTGHTDNYL-----KVFFTDPA 408 Query: 417 NVKPGDILRV 426 P + + V Sbjct: 409 GSSPEETVPV 418 >UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA2 Length = 443 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 136/446 (30%), Positives = 209/446 (46%), Gaps = 26/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + GC N DSER+ L + GY P D AD+++ NTC ++A Sbjct: 1 MKRYHVTTFGCQMNEHDSERMKGMLESLGYREAPDADVADLILFNTCSIREAADSRFKAH 60 Query: 67 IGEALNENG-----KVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHV-HHYVPK 119 +G A + V GC +D++ E P V GP ++ E + + Sbjct: 61 LGHAKRRKRERPEVVIGVGGCWAQSVKDEVFEQFPFVDVAFGPGQVHKLAEFLTSESLTA 120 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + F + K + +IS GCN C++CI+PS RG V RP+G ++++ + Sbjct: 121 QGYFEFEGFTGDLPEKRAREFQGWTQISVGCNMACSYCIVPSTRGRDVGRPLGVLVADVE 180 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 R+ GV E+ ++ Q+ +AYG D+ R + L + + R+ Y Sbjct: 181 RMASEGVTEVTLLGQNVNAYGRDLHRRGFPS------ATFADLLSAVDAIDGIRRIRYTS 234 Query: 240 PYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 P+P +DVI AE + ++ +PLQ S R+LK M+R S +R L R+ RE P Sbjct: 235 PHPQDMKEDVIRAHAELEALCEHVHLPLQSGSSRVLKAMRRTYSRERYLDRVALLREHVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++ + + IVGFPGET+EDF L +E D F YSP +A LPDQVP EVK Sbjct: 295 DVAITTDIIVGFPGETDEDFAQTLSLCEEVAYDGAFTFVYSPRRETEAATLPDQVPHEVK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLN 413 ER +R +++ Q+ + ER Q VGR + V+++ GRS + +N Sbjct: 355 VERMDRLVEVIQRRAKERAQRFVGRTVEVLVEGPSRTDPTRLRGRSRHNK-------VVN 407 Query: 414 GETNVKPGDILRVKVEHADEYDLWGS 439 +PGD + V VE A L G Sbjct: 408 FSGLAQPGDYVHVDVESATSQTLMGE 433 >UniRef50_B2A1N3 RNA modification enzyme, MiaB family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1N3_NATTJ Length = 446 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 116/459 (25%), Positives = 204/459 (44%), Gaps = 37/459 (8%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVP----SYDDADMVIVNTCGFIDSA 59 ++ P++ F++ GC N DSE + + G+++ D+ D+ I+NTC A Sbjct: 1 MSDVPRVKFITFGCKVNQYDSEALKELFQDRGFEISDWNPQELDNIDVAIINTCTVTHLA 60 Query: 60 VQESLEAIGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV 117 +++ + I + N + VTGC + Q + V + G ++E V + Sbjct: 61 DRKARQHIRKLKRRNPNCVIAVTGCYPQTDPQTVKALEGVDIVHGIEDRSGLVELVEQAL 120 Query: 118 PKP------------KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 K + + + K R +LKI EGC+ C++CIIP RG Sbjct: 121 SKENIWQGAIHLHDSRPKGEFENLKIKNFKKHDRTRHFLKIQEGCDQFCSYCIIPYARGH 180 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 L SRP +V+SE K+ V G KEI++ + AYG + ++ +L ++ Sbjct: 181 LRSRPPEDVISEIKQAVSNGFKEIVLTGINLGAYGRE----------NSNLPNLATLLDK 230 Query: 226 LS--KLGIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVD 282 + K RL P ++ L+ KI +L IPLQ ILK M R S + Sbjct: 231 IIHLKGDYRIRLSSCEPQEITIGLLELVTNSEKICKHLHIPLQSGDNEILKAMNRDYSKE 290 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 + RE P + + + IVGFPGE+ F+ +F+K+ + F+YSP + Sbjct: 291 DYRKIVMAAREKSPSIAITTDIIVGFPGESANHFRNTKEFVKKIGFSDIHIFQYSPRKNT 350 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD 402 A DQV + K+ R +++ + +S ++ + + + V++++ +E+ A G S Sbjct: 351 PAQEFSDQVHSKEKKARSQELIEISRDLSRVYHEQFIDKTVPVLVEKHEEDVASGVSDTY 410 Query: 403 APEIDGAVYLNGETNVKP-GDILRVKVEHADEYDLWGSR 440 V N E+ + I +V++ ADE ++G Sbjct: 411 L-----KVTFNVESEINLYNKICQVQINSADEEMVYGEL 444 >UniRef50_C8WY42 MiaB-like tRNA modifying enzyme n=58 Tax=Bacillales RepID=C8WY42_ALIAD Length = 471 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 123/455 (27%), Positives = 196/455 (43%), Gaps = 39/455 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P + F +LGC N D+E I + GY VP AD+ +VNTC + ++S + Sbjct: 1 MPTVAFHTLGCKVNFYDTEGIWQTFKRRGYTQVPFDSVADVYVVNTCTVTHTGDRKSRQM 60 Query: 67 IGEA--LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I A N + V+VTGC V + G ++++HV + + K Sbjct: 61 IRRAVRTNPDAVVVVTGCYAQIAPDEIARIQGVDLVVGNDQKSKIVDHVEAVLAERKPYL 120 Query: 125 FL-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + R A LKI +GCN+ CTFCIIP RG + SR V+ + Sbjct: 121 AVGNIMQATEFDELDVPYFEERSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQ 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRL 235 A +L AG +EI++ T YG D ++ + L L ++ R+ Sbjct: 181 ATKLARAGYREIVLTGIHTGGYGEDFEN-----------YRLADLLLDLERIDLPFRIRI 229 Query: 236 HYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + D ++ ++A K ++P+L IPLQ S +L+ M R + ++++ R Sbjct: 230 SSIEASEIDDRLMDVLAASKKVVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLRELRRR 289 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P+L + + IVGFPGET+E F F++ ++ F YSP G A DQVPE+ Sbjct: 290 LPDLAVTTDVIVGFPGETDEQFGETYAFVRAQGYAQLHVFPYSPRRGTAAYKFKDQVPED 349 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV--DEEGAIGRSMADAPE------- 405 VK R R + L + VGRE+ VI + + R+ + PE Sbjct: 350 VKRARVARMIALGDDLRQAYAASFVGRELEVIAESPLASADDEARRAYSHLPEASRMLVG 409 Query: 406 ---IDGAVYLNGETNVK----PGDILRVKVEHADE 433 V ++V G+++RV++ Sbjct: 410 YDGHYLRVAFEAPSDVPLESMIGEVIRVRMTGVGP 444 >UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMH4_9BACT Length = 452 Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 130/452 (28%), Positives = 218/452 (48%), Gaps = 23/452 (5%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 + K+ + GC N DSE + +L GY++ DAD++I+NTC D A +++L Sbjct: 2 SKEKVLIKTYGCQMNDRDSEAVEMDLLKSGYEITTEEKDADVIILNTCSVRDQAERKALG 61 Query: 66 AIG-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 +G N +V V GC+ + D I E + V + G ++ E + Sbjct: 62 KVGSLIKLRRKNPKLQVGVIGCMAQSRADDIVEKNAHVNFVAGTDQLHKIPELIEKSKDT 121 Query: 120 PKHNPFLSLVPEQGVKLTPRH----YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 L + +L A + I GCN CT+CI+P RG SR I ++ Sbjct: 122 EDALIETGLSRDIMERLDNHPEGQMNASVAIMRGCNEYCTYCIVPFTRGQEKSRTIASII 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E K L + GV+EI+ + Q+ +AYG+ R N E +L + +K+ R+ Sbjct: 182 AEVKALSEKGVREIMYLGQNITAYGLIEARRDRTFNKEVSP--FAALLRETAKIEGIKRI 239 Query: 236 HYVYPY--PHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + P+ DD+I +A E KI + PLQ S R+LK+M+R + + L+ I + + Sbjct: 240 RFTSPHARYFNDDLIDTIAAEPKICRAIHFPLQSGSNRLLKVMRRRHTAEEFLSWINKMK 299 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 E +T + IVGFPGETEEDF+ D E D+ F+YS + A +P+Q+ Sbjct: 300 ERIDGITFTTDLIVGFPGETEEDFKATRDMCNEIDFDQQFIFRYSTRKNTPAAQMPNQLD 359 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGA 409 EE K ER ++ ++ + +++VG ++++ V + GR+ Sbjct: 360 EETKIERNQILLKDLEERLTHKNEQRVGTIEEIMVEGVSKRNDDKWTGRTTNYK-----I 414 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 V + + +VK GD++ +K+E A ++ L+GS V Sbjct: 415 VIFDPQEDVKVGDLINIKIERATQHALYGSYV 446 >UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Ruminococcaceae RepID=C7H912_9FIRM Length = 441 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 181/449 (40%), Positives = 255/449 (56%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI +SLGCPKN VD + ++ L + G++ V +AD+++VNTCGFI+SA E++E I Sbjct: 1 MKIACISLGCPKNQVDLDVMVHILLSAGHETVADLGEADVILVNTCGFIESAKTEAIENI 60 Query: 68 GEAL-----NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 EA N KVIVTGCL + QI E P+V + G S + + V Sbjct: 61 LEACAYKQQNPELKVIVTGCLAERYRSQIEEEIPEVDAVVGCASNKAIDTIVARLFHGEN 120 Query: 122 HNPFLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 H + + V TP HYAYLKI+EGCN+RC +C IP +RG L SR + + ++ Sbjct: 121 HLESYGAKKDFPLGGKRVIGTPAHYAYLKIAEGCNNRCHYCAIPGIRGPLHSRDLADCVA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 EA+ L GVKE++V++QD +AYG D S+ L ++L+K+ W R Sbjct: 181 EARWLAGEGVKELIVVAQDPTAYGEDWGK----------PGSICELLDKLNKVPGLEWIR 230 Query: 235 LHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 + Y YP DD I M K++PYLD+P+QH + ILK M R + L I + R Sbjct: 231 IMYAYPERITDDFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRRSTRAELLEVIGKLRR 290 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P +TLR+T I GFPGETEE F+ L +F+KE R DR+GCF YS E A + Q+ + Sbjct: 291 EIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVRFDRLGCFAYSAEENTVAAKMDGQIDQ 350 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVY 411 E K+ R MQ+Q I A++ EKVG+ + V+ D +DEE + R+ DAPE+DG V Sbjct: 351 ETKDRRAELVMQIQTGIMAQKQAEKVGQTVRVLCDGIDEESGLYLCRTTGDAPEVDGNVC 410 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSR 440 ++ E + PG V VE +D YDL+G+ Sbjct: 411 VSSEEPLYPGQFYDVLVEDSDLYDLYGTV 439 >UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Acidobacteria RepID=MIAB_SOLUE Length = 445 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 121/446 (27%), Positives = 200/446 (44%), Gaps = 26/446 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC N DSE+++ L EGY+ V + + A++V NTC D A Q+ + Sbjct: 7 KTFYIETFGCQMNAHDSEKVVGTLLAEGYEQVATPEAAELVFYNTCSIRDKAEQKVFNRL 66 Query: 68 GEALNENGK---VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 E K V GC+ +E + I + P V + G SY ++ E + + Sbjct: 67 QNFKREGMKGKIFGVLGCVAQQEGEKIFDRAPHVSLVAGSASYTRLPEMLVQLEAGNRRV 126 Query: 124 PFLSLV-----PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 LSL + H AYL I EGC+ C +C++P RG SR V++EA Sbjct: 127 TGLSLDTEETFDTPFTRRDNPHRAYLTIIEGCDKACAYCVVPFTRGPERSRTSESVMAEA 186 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + L + G E+ ++ Q+ ++Y + P +L +++++ R+ Y Sbjct: 187 RGLTEKGYTEVQLLGQNVNSY----------RDPSPAGWDFATLLAKVAEIPGMRRVRYT 236 Query: 239 --YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 +P V ++ M A I ++ +P+Q S ++L M R + D L RI + Sbjct: 237 TSHPRDFVRPIVDAMDANEAICDHIHLPVQSGSSKVLAAMDRLYTRDEYLRRIDWIKSAK 296 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 +L + I+GFPGET+ DF+ LD L E + D + FKYSP A A+ D++PEE Sbjct: 297 RRYSLTTDIIIGFPGETDADFEQTLDLLDEVQYDSLFSFKYSPRPNTSALAMEDRIPEEE 356 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLN 413 K+ R + Q+ I R E +G V+++ ++ IGR+ + + + Sbjct: 357 KQRRLLTLQEKQRAIQIRRNAEMIGSIQEVLVEGRNQALGQWIGRTTCNRTLNFS--HPD 414 Query: 414 GETNVKPGDILRVKVEHADEYDLWGS 439 N G L V+V + L G Sbjct: 415 TNGNELVGKYLPVRVTRSGPNSLVGE 440 >UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDC7_9FIRM Length = 433 Score = 440 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 154/443 (34%), Positives = 245/443 (55%), Gaps = 20/443 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+GFVSLGC KNLVDSE+++ L + +++V A+ +I+NTCGFI+SA +E++ I Sbjct: 1 MKVGFVSLGCSKNLVDSEKMMGMLVSGQHELVSDPAQAEAIIINTCGFINSAKEEAIATI 60 Query: 68 GEALNENG----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + ++IV GCL + + + E P++ + Y + E + + + Sbjct: 61 FKMAEYKKDKCKRLIVVGCLAQRYKETLEEEIPEIDAVISIREYPHLHEILKELLDEHD- 119 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 +S + + AYLKI+EGC++RCT+C IP +RGD VS P+ +++ EAK+L Sbjct: 120 --LVSYDKCERKVSSRPWTAYLKIAEGCSNRCTYCAIPLIRGDNVSFPMEDLVKEAKQLA 177 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 GVKE+++I+QDT+ YG+D + + + W R+ Y+YP Sbjct: 178 QRGVKELVLIAQDTTKYGLDRYGKLSLLELLKQLHEI--------EGFHWIRILYMYPDE 229 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++I MA K+LPY DIP+QHA+ R+LK M R G+ + L ++ R TLR Sbjct: 230 IEDELIEGMARLPKVLPYFDIPMQHANNRMLKAMNRRGTKEEVLRLCEKIRNTFENPTLR 289 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 +TFIVGFP ET + F L++F+ + DR+G F YSP E A + V EE K+ R Sbjct: 290 TTFIVGFPSETHDHFNELMEFVNDVHWDRMGAFPYSPEEDTPAFDMEQDVSEEEKQRRLE 349 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAP-EIDGAVYLNGETNV 418 + M Q++IS + Q+ +G+ I V++++ + GR + AP E+DG V + + Sbjct: 350 QLMLRQEEISLQNQQKMIGQVIEVLVEDQEGLSGLYRGRGKSSAPDEVDGIVIFKSDRFI 409 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 G ++V+V A +DL G V Sbjct: 410 PYGSFVKVRVTEAFPHDLKGVEV 432 >UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR40_9FIRM Length = 447 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 115/445 (25%), Positives = 196/445 (44%), Gaps = 25/445 (5%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + K+ F++LGC N DS+ + + GY V ++AD+ ++NTC ++S Sbjct: 8 SNGKKVSFITLGCKVNQYDSDAMRSLFIRNGYKVAKENENADVYVINTCSVTSIGDRKSR 67 Query: 65 EAIGEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + + + GC + V I G + ++E+V + K Sbjct: 68 QMVRRIRREHPGAVIAAAGCYAQLAPDVFVQMGDVDVIVGIQNRSHIVEYVEEAAAEKKT 127 Query: 123 NPFLSLVP--------EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + + + A++KI EGC++ CTFCIIP RG L SR + Sbjct: 128 LNAVGDIMAVTDFENLSVDAEGEVKTRAFIKIQEGCDNYCTFCIIPFARGKLKSRRQSDA 187 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 + E +RLV+ G +E+++ YG D+ T + L R Sbjct: 188 VEEIRRLVEKGYREVVLTGIHLGNYGKDLHDGTSLSTLVTELVRIPDLL--------RIR 239 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + D++I ++ E K+ P+L +P+Q S ILK M R + I+ R+ Sbjct: 240 LGSIESVELSDELIRIIREEPKVCPHLHLPIQAGSDDILKRMNRHYRLAEYKELIRNLRK 299 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 P L L + IVGFPGETEE+F+ LD L+E + + F YSP +G A A P+QV Sbjct: 300 EIPGLALTTDLIVGFPGETEENFRETLDTLQELQFSAIHVFPYSPRKGTPAAAYPNQVKP 359 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 E+K+ER R L ++++ + + + V+++E E G S Sbjct: 360 EIKKERAARVQALGKELAGAYRNQFFHKMVRVLVEEEKEGFFEGVSDEYIR------VFI 413 Query: 414 GETNVKPGDILRVKVEHADEYDLWG 438 + +V+ G + V ++ + + G Sbjct: 414 KDKDVEKGKVYSVWIDSMTDNGMIG 438 >UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2 Tax=Mobiluncus mulieris RepID=C2KPF3_9ACTO Length = 552 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 132/489 (26%), Positives = 210/489 (42%), Gaps = 68/489 (13%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD------------ADMVIVNTCGF 55 V+LGC N DSER+ L G V S + AD+V++NTC Sbjct: 25 RTYHVVTLGCQMNEHDSERMAGLLDAAGMVPVSSVPEKAARATRAGDGGADVVVLNTCSV 84 Query: 56 IDSAVQESLEAIGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQV 109 ++A + +G+ + V GC +E I P V I G H+ + + Sbjct: 85 RENAANKLYGHLGQLAEVKRERPGMMIAVGGCFAQQEGSGILRRAPWVDAIFGTHNIDML 144 Query: 110 LEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRG 164 + + + L + + P H A++ IS GCN+ CTFCI+PS+RG Sbjct: 145 PVLLRRAELRQEAAVELEETLKVFPSMLPAHRTSPASAWVSISVGCNNTCTFCIVPSLRG 204 Query: 165 DLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCE 224 R E+L E + +V G E+ ++ Q+ ++YG R + L Sbjct: 205 RERDREPEEILRELQAVVAQGAVEVTLLGQNVNSYGNGFGRRG----------AFAQLLR 254 Query: 225 QLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSV 281 + + RL + P+P +DVI MAE ++P L PLQ S R+L+ M+R V Sbjct: 255 EAGRTPGLERLRFASPHPAAFTEDVIAAMAETPTVMPSLHFPLQSGSDRVLRQMRRSYRV 314 Query: 282 DRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEG 341 +R L + + R+ PE + + IVGFPGET+ DF+ L +++AR F YS G Sbjct: 315 ERFLRILGEVRDAIPEAAITTDVIVGFPGETDADFEATLRVMEQARFSAAFTFIYSRRPG 374 Query: 342 ADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVII-DEVDEEGAIGRSM 400 A DQVP EV ER+ R + LQ++IS E + G+ + V++ ++ ++ GR Sbjct: 375 TPAADREDQVPSEVVSERYQRLLALQERISTEENERLEGQTVEVLVGEQGTKDRETGRMS 434 Query: 401 ADAPEIDGAVYLNGETNV------------------------------KPGDILRVKVEH 430 A + V+ ++ +PGD + V+V H Sbjct: 435 GRARDN-RLVHFALPPSLSQSDLQKGNGSAITHSGGKLMHPGGEPPMPRPGDFVTVQVTH 493 Query: 431 ADEYDLWGS 439 + L Sbjct: 494 GAPHHLVAD 502 >UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSA4_9FIRM Length = 437 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 159/448 (35%), Positives = 250/448 (55%), Gaps = 24/448 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + V+LGC KN VDS +++ L Y V AD++IVNTCGFID+A +ES++ Sbjct: 1 MNSVKIVTLGCSKNEVDSSCMMSILDKNRYSVENDPQKADIIIVNTCGFIDAAKEESIDT 60 Query: 67 IGEALNEN-----GKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I + K+I++GCL + + + + P+ I G + Q+ + + + Sbjct: 61 ILQMAKYKETGSCKKMILSGCLAQRYPEELLKEIPEADGIIGTGNISQINDILDRSIDGE 120 Query: 121 KHNPFLSLVP---EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 K ++ E K Y+KISEGCN+ C++CIIP +RG SR I ++ E Sbjct: 121 KVIKVDNINSPYLEGIKKEKVNITEYVKISEGCNNNCSYCIIPKLRGKNRSRRIEDIYEE 180 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRL 235 L G +EI++I+Q+T+ YG+D+ R S+ L +++SK+ W R+ Sbjct: 181 VSYLAKNGAREIILIAQNTTDYGIDLYGRY----------SLSKLIKEISKINDIKWIRV 230 Query: 236 HYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+YP D++I + K++ Y+DIPLQH S +LKLM R + I++ R+ Sbjct: 231 LYLYPDHFTDELINEFINNDKLVKYVDIPLQHYSDHVLKLMDRHTDKEHIKNLIEKLRK- 289 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 L +R+TFIVGFPGE+EEDF +L +F+ + D++G F YS E AN L +Q+ E+ Sbjct: 290 IKGLVIRTTFIVGFPGESEEDFNILREFINTYKFDKLGVFTYSREESTKANNLNEQIDED 349 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYLN 413 VKE R + MQ Q +IS L++K+G+ + V+I+E E+ GRS D+P+IDG +Y+N Sbjct: 350 VKEYRRDIIMQDQLKISERLLEDKIGQVLQVLIEEKIEDNLFAGRSYIDSPDIDGVIYVN 409 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 + N+ + VKV + EYDL G + Sbjct: 410 SDKNLTINSFINVKVTSSMEYDLIGDAI 437 >UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MIAB_AKKM8 Length = 458 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 123/464 (26%), Positives = 223/464 (48%), Gaps = 45/464 (9%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 PK+ + GC N DSE++ +GY + D+AD+++ N+C + A Q++L Sbjct: 1 MPKLYIKTYGCQMNERDSEQVARMFVQKGYTMTDREDEADVILFNSCSIREQAEQKALGK 60 Query: 67 IG-----EALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + + + GC+ K++++ + P++ + G Y +V EHV + Sbjct: 61 MGLLAKQQRHRPHVVYGMMGCMAQSKKEELFKELPRLDLVVGTQKYHRVFEHVDGILRAR 120 Query: 121 KHNPFLSLVP--------------------EQGVKLTPRHYAYLKISEGCNHRCTFCIIP 160 + L + R AY+ I +GC +C +CI+P Sbjct: 121 QERRMDELQTAFSGTHVCDVAEEADSQNRIRDHLNPGVRSTAYVSIMQGCEMKCAYCIVP 180 Query: 161 SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMV 220 RG SRPI +V+ E K L DAGVKE+ ++ Q + YG ++ G K V Sbjct: 181 YTRGAERSRPIRDVVDEVKMLADAGVKEVTLLGQIVNRYGRQMETAGG-------KGGFV 233 Query: 221 SLCEQLSKLGIWTRLHYVYPYPH--VDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKR 277 L E + ++ R+ +V P+P D++ K+ ++ P+Q S RILK+M+R Sbjct: 234 QLLEAVHEVEGIRRIRFVSPHPIGFRQDLVQAFTYLPKLCSHIHFPMQSGSDRILKMMRR 293 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 P + L + ++ P+L++ + IVGFPGETEED+ + +++ + D F+YS Sbjct: 294 PYRNETYLDLCSRMKQARPDLSITTDIIVGFPGETEEDYLLTRQAVEQVQFDNAFIFRYS 353 Query: 338 PVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--- 394 P G A + +Q+PEEVKE R + + +I+ + ++ VG V+++ + Sbjct: 354 PRRGTPAAVMENQIPEEVKEARNQDLLAVVNEIAIRKNRDLVGTVQEVLLEGPSKTNAAR 413 Query: 395 AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 GR+ + P V ++ ++ G+IL +++E + + L+G Sbjct: 414 LSGRTSQNKP-----VMVDAAPDL-AGEILPIRIEESTGFTLYG 451 >UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Proteobacteria RepID=MIAB_NITOC Length = 447 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 111/451 (24%), Positives = 202/451 (44%), Gaps = 32/451 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRT-EGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N DS R+ LR G ++ + A+++++NTC + A ++ Sbjct: 3 KKLYIKTHGCQMNEYDSSRMADVLRESHGLELTSDPEQAEVLLLNTCSVREKAQEKVFSQ 62 Query: 67 IGEAL-----NENGKVIVTGCLGAKEDQIRE-VHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + V GC+ ++E + P V + GP + ++ + Sbjct: 63 LGRWRQLKQSRPELVIGVGGCVASQEGETIRVRAPYVDLVFGPQTIHRLPAMLTQAKASS 122 Query: 121 KHNPFLSLVPEQGVKLTPRHYA-----YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + LS + P A ++ + EGC+ C+FC++P RG+ +SRP +V+ Sbjct: 123 QPVVDLSFPEIEKFDKLPEPRAEGPTAFVSVMEGCSKYCSFCVVPYTRGEEISRPFDDVI 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E L + GV+EI ++ Q+ +AY GE + L ++ + R+ Sbjct: 183 AEIVGLAEQGVREITLLGQNVNAY--------RGSIGEGDTADLALLIHYVASIEGIERI 234 Query: 236 HYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 + +P D +I AE ++ +L +P+Q S R+L LMKR +V A++++ R Sbjct: 235 RFTTSHPVEFSDSLIQAFAEVPALVSHLHLPVQSGSDRMLSLMKRGHTVLEYKAKLRKLR 294 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 ++ P++++ S FIVG PGETE DFQ L + E D F YSP G A +LPD P Sbjct: 295 QVRPDISISSDFIVGLPGETEADFQATLALVDEVGFDHSFSFIYSPRPGTPAASLPDCTP 354 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGA 409 +K+ER + + + V V+++ ++ GR+ + Sbjct: 355 IALKKERLAILQGRLRALEIAISRGMVDTVQQVLVERPSKKDPTMLAGRTANNR-----V 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + ++ G + +++ A L G Sbjct: 410 VNFSASQDM-VGQFVNIRITEALPNSLRGIV 439 >UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA6_9FIRM Length = 451 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 161/459 (35%), Positives = 243/459 (52%), Gaps = 36/459 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 KI +LGCPKN DSE + G+ S DAD+V+VNTCGFI A ES++AI Sbjct: 1 MKIFIETLGCPKNFNDSEYAYGSFFSAGFKKADSISDADVVVVNTCGFIHDAKVESIDAI 60 Query: 68 GEALNENG---KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYV-PKPKH 122 +A + ++V+GCL + +++++ P+V G + Y + E + Sbjct: 61 FDAAQKKKSSAILVVSGCLSQRYMEELKKEMPEVDIFAGVNDYFNLPEICKKRLNDGKSK 120 Query: 123 NPFLSLVPEQGVKLTPRHYAY---------LKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 L+ P++ P A+ +KISEGCN++C FCIIPS+RG SR I + Sbjct: 121 GAVLTKSPQKNDFPEPGSRAFENVNNNSYTIKISEGCNNKCAFCIIPSIRGSFRSRYIQD 180 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 ++ EA+ LV G KEI++I QD +A+G D + ++ L ++SK+ Sbjct: 181 IVKEAEFLVTLGAKEIILIGQDVTAFGTD----------RRNEDTLALLLREVSKIEGEF 230 Query: 232 WTRLHYVYPYPHVDDVI-PLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W RL Y Y D++I +M K+ Y+D+P+QH S +L M+R D + RI+ Sbjct: 231 WIRLMYCYDNKITDELIAEIMRNKKVCKYIDMPIQHISDNVLSAMRRGSDSDLIIERIRA 290 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R ++ +R+T I GFPGE+EEDF L +F+KE DR+G F YS EG A Q Sbjct: 291 LRSNIDDIHIRTTLITGFPGESEEDFNKLYEFVKEQEFDRLGVFSYSEEEGTAAAKCK-Q 349 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-------DEEGAIGRSMADA 403 +P+E++E+R + M+LQ +IS + + VG+ + V+ID V E IGR+ DA Sbjct: 350 IPDEIREQRRDSIMRLQSEISKNKNKMMVGKTMKVLIDGVIEGEQSGSERMLIGRTEFDA 409 Query: 404 PEIDGAVYLNGETNVK-PGDILRVKVEHADEYDLWGSRV 441 PEID V K G+ V + + EYD++G V Sbjct: 410 PEIDNCVIFKPAICGKDVGEFTYVHITGSSEYDVYGEEV 448 >UniRef50_C0WDC4 RNA modification enzyme n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDC4_9FIRM Length = 435 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 111/443 (25%), Positives = 191/443 (43%), Gaps = 25/443 (5%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 I F +LGC N D+ + R GY++VP + +D+ ++NTC + +S I Sbjct: 5 ISFYTLGCKVNQSDTASMEKLFREAGYEIVPFGEASDICLINTCVVTNMGQGKSRRMIRR 64 Query: 70 ALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + + K ++VTGC + V + G +++E V + + P Sbjct: 65 TIKRDPKPLIVVTGCYPQTAPEEVAALEGVDLLVGNRDRARIVELVEERLGERDAAPVND 124 Query: 128 LVPEQ---------GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 ++ R A+LKI EGC+ C++CIIP RG L SRP+ + E Sbjct: 125 VLDLPVGSEFEDLAASVDDSRDRAFLKIQEGCDQYCSYCIIPYARGHLRSRPLSSIRREV 184 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + L + G KE++++ YG + + + S+ +LC RL + Sbjct: 185 EHLTEEGYKEVVLLGIHLGCYGKETANGERLSDAVSAALSVPALC--------RLRLGSL 236 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +++ LM E + +L +PLQ +ILK M RP R I + R P+ Sbjct: 237 ESVEVQPELLRLMQEDPRFCCHLHLPLQSGCDKILKAMNRPYDTARFKELIDRIRAAVPD 296 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + + IVGFPGETE DF L F + ++ F YS +G A DQ+ + KE Sbjct: 297 VAITTDIIVGFPGETEADFAQTLTFAEACGFAKIHIFPYSKRKGTPAAERKDQLSNKEKE 356 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 +R +R + ++ + + +GR+ V+ +++ +G VYL E + Sbjct: 357 DRVHRLEAVDRKGNEIFRKTLIGRQYPVLWEQIGRKGL----WEGLTPNYVRVYLKSEED 412 Query: 418 VKPGDILRVKVEHADEYDLWGSR 440 + G + V V + + Sbjct: 413 LT-GTLTTVAVTGLFDDGVLAEP 434 >UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Synergistaceae RepID=D1B5R4_THEAS Length = 433 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 123/451 (27%), Positives = 198/451 (43%), Gaps = 34/451 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 GC N+ D++++ L G+ +D+ + TC D A Q+ L Sbjct: 1 MGTFNINVFGCQMNVYDADKLRAALLGMGWTQ-GEPGGSDVEVYVTCSIRDKAEQKVLSE 59 Query: 67 IGE--ALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 IG E V + GC+ + ++ P V + GP +V E + + + Sbjct: 60 IGRHSRSKERPLVALVGCMAQRTGRELARRFPWVKVVAGPRHLGKVPEALERSMADGEVR 119 Query: 124 PFLSLVPEQGVKL-------TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 L P + L Y+ I+ GC+H C +CI+P +RG SR ++ Sbjct: 120 LLLDEDPREVDDLCCTPHVEEGAVRGYVTIAHGCDHFCAYCIVPYVRGRFRSRDPEGIVE 179 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E ++LV GV+EI ++ Q+ + YG D+ L E ++++ R Sbjct: 180 EVRQLVARGVREITLLGQNVNRYGKDLPGGPQ----------FPGLLEMVARVEGISRVR 229 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +P +++ +M K+ P +++P+Q S R+LKLM R + D L+ + R+ Sbjct: 230 FATNHPVDFSRELVDVMVRCEKVCPSINLPVQSGSDRVLKLMGRGYTRDEYLSMVALLRD 289 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 PE+ + S IVGFPGET EDF+ L L+E R D V YS G A + + Sbjct: 290 NLPEVGITSDLIVGFPGETPEDFEKSLSLLEEVRFDLVHTAAYSVRPGTRAERMEGHLDV 349 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAV 410 K ER NR QLQ +IS E KVGR V+++ +G GR+ D V Sbjct: 350 STKAERLNRVNQLQARISLEINLSKVGRVYPVLVEGPAPKGEGMWQGRTPQ-----DKVV 404 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 G + K G+ + V++ A + L G + Sbjct: 405 LFKGPS--KVGEEVPVRITSALAWYLQGELI 433 >UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Bulleidia extructa W1219 RepID=D2MLZ6_9FIRM Length = 480 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 115/448 (25%), Positives = 211/448 (47%), Gaps = 28/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N+ D E + L G+ + AD+++ NTC +A ++ + I Sbjct: 43 KKYYVKTYGCQANVRDGESLSGMLEMMGFTYAEVPEKADVILFNTCAIRRAAEEKVMAEI 102 Query: 68 G-----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + N ++ GC+ ++ +++ + HP++ I G H+ + + + K Sbjct: 103 GNLKYLKKEKPNIIFVLCGCMAQEKDVVEELLQKHPQLDLIFGTHNLYRFPALLQEVMVK 162 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + V+ P ++ I GC+ CT+CI+P RG SR + ++ Sbjct: 163 KIQKVEVYSQEGEVVESLPVKRSMSSKGFVNIMYGCDKFCTYCIVPYTRGKERSRRMKDI 222 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 L E L +G KE++++ Q+ +AYG D+ G L +S GI Sbjct: 223 LEEVSALKKSGRKEVVLLGQNVNAYGKDLHMEDG----------FTDLLRAISDTGIERI 272 Query: 234 RLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R + +P + +I LMAE K I+P+L P+Q S ILK M R +V+ ++ + Sbjct: 273 RFYTSHPRDYRSSLIDLMAERKNIMPFLHFPVQSGSNEILKRMARGYTVEHYISLYDEMM 332 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P +T + IVGFPGE++EDF+ ++ ++ + D F YSP G A ++ D + Sbjct: 333 KKIPNMTFTTDIIVGFPGESDEDFEKTMNLVEHCQYDMAYTFLYSPRVGTPAASMTDSIS 392 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +EVK+ R R Q ++I+A++ + +GR + V+ + + ++ + A E + V Sbjct: 393 KEVKKARLQRLNQRLREIAAKKNKVYLGRIVRVLCEGISKKNE--KIYAGYTEDNKLVNF 450 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSR 440 + N +I+ V++ Y L G Sbjct: 451 SCPWNC-MDEIVDVEITETHSYTLNGRV 477 >UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKT1_9BACT Length = 436 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 116/448 (25%), Positives = 209/448 (46%), Gaps = 36/448 (8%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + + GC N DS+RI L G + +AD+VIVNTC + A Q++L ++G Sbjct: 5 TLYLETYGCQMNEYDSDRIQNAL---GASITEDPKEADIVIVNTCAIREKADQKALSSLG 61 Query: 69 E-----ALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 A N V V+GC+ + + P + + GP + Q+ + + K Sbjct: 62 RFKHLKAKNPELIVGVSGCVAQLYGEDLIRRIPHLDFVLGPRAIPQLPQLIEEIKEKKSR 121 Query: 123 NPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 S ++ + P H A++ I +GCN +C +CI+P++RG V+RPI ++++E Sbjct: 122 PVETSFDIQEPFDVLPYHQEGKPAAFVSIQQGCNKKCAYCIVPTVRGSEVNRPIEDIIAE 181 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 A+ L+ GVKEI +I Q +++ + L L +L R Sbjct: 182 ARYLIAKGVKEITLIGQTVNSW-------------KLGGLKFGDLLRVLGELDGLERIRF 228 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 YP ++ MA+ K+ ++ +P+Q S ++L+LM R S + + + R+ Sbjct: 229 TTSYPRDITKKMVEAMADVPKVCRHIHLPVQSGSDKVLRLMNRTYSRSWYIDSVNRLRDA 288 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL---PDQV 351 P + + S IVGFPGETE+DF+ + ++E D FKYSP G L ++V Sbjct: 289 MPNIAVSSDIIVGFPGETEDDFEQTMSLVEEVGFDSSFSFKYSPRPGTVGEELWRSGERV 348 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 + +R R + Q+ I+ E+ +++G+ V++++ + + ++ E + V Sbjct: 349 EDSTAGQRLARLQEYQRAITLEKNAQRIGKSEQVLVEDASRKDSSW--LSGRTEHNRIVN 406 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGS 439 GE + G ++ V++ L G Sbjct: 407 FPGEKEL-IGKMVDVRITEGLANSLRGQ 433 >UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHG4_9BACT Length = 427 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 112/443 (25%), Positives = 209/443 (47%), Gaps = 29/443 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K + GC N+ DSE I + L G+ V +AD+++ NTC A + L I Sbjct: 1 MKFYIETYGCQMNVADSELIASILTKAGHQEVTQISEADLLLFNTCSVRGHAEERVLGRI 60 Query: 68 -----GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + N N K+ V GC+ + ++I + V + G Y+ + + ++ K Sbjct: 61 QSENHRKKENPNLKIGVVGCMAQRLGEEINKEKLTVDFVIGVDQYQHLPDILNEETEKTI 120 Query: 122 HNPFLSLVPEQGVKLT--PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 +G++ + AY+ I GCN+ C++CI+P +RG SR +++ E Sbjct: 121 LTDLDETQLYKGIQPAYHNDYCAYITIMRGCNNFCSYCIVPYVRGRERSRSWQDIIEETI 180 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 + G K+I ++ Q+ ++Y NGE ++ + +L ++ R + Sbjct: 181 SAGNQGKKDITLLGQNVNSY----------LNGEVNFPRLLIILNELDEI-YRLRFITSH 229 Query: 240 PYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P +++I ++A KI ++ +P+Q S ILK M R +V ++ +++ + P + Sbjct: 230 PKDLSEELIEVLANSAKICEHIHLPVQSGSDNILKAMNRNYTVQHYISLVEKLHKFIPNI 289 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + + GFPGETE DFQ L +K D C+K+SP G A L +QVPE + Sbjct: 290 AITTDIMTGFPGETENDFQDTLSLMKTIEFDDAFCYKFSPRPGTTAETLSNQVPEAERLA 349 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPEIDGAVYLNGE 415 R + + LQ++IS ++ +E++GR++ V I+ + + +G++ D + Sbjct: 350 RLQQMIDLQRKISLKKNREQIGRKVEVYIESFSKKSRKMVLGKTR------DFKTAVLPG 403 Query: 416 TNVKPGDILRVKVEHADEYDLWG 438 T G + +++V+ A L Sbjct: 404 TEDDFGTLKQIEVKDATASTLIC 426 >UniRef50_A1APR6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=5 Tax=Desulfuromonadales RepID=MIAB_PELPD Length = 440 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 105/446 (23%), Positives = 197/446 (44%), Gaps = 29/446 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI-- 67 + + GC N+ DSERILT L GY A ++++NTC A ++ + Sbjct: 6 VYIETFGCQMNVNDSERILTMLADIGYVPTQEPARARLILLNTCSVRAGAEEKVYRRLEN 65 Query: 68 ---GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + N + V GC+ +E + + E PK+ + G H+ + + V + + Sbjct: 66 LVVLKRHNSRLIIGVGGCVAQQEGEALLERIPKLDLVFGTHNLHLLNDMVLAAERGERKS 125 Query: 124 PFLSLVPEQGVKLTPRHYA------YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + +Q + L P ++ + +GC + C++CI+P +RG VSR G++L E Sbjct: 126 ETSFIDNDQRLDLFPPIRGTARISSFVTVMQGCENYCSYCIVPYVRGPEVSRRSGDILRE 185 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 ++L D GV+E+ ++ Q+ ++YG+ + S L ++ + R Sbjct: 186 VRQLADQGVREVALLGQNVNSYGL----------KSSAEPSFAELIRLVAAVDGIRRIRF 235 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P ++I + + L +P Q S +L M R + + L +++ R + Sbjct: 236 FTSHPKDMSPELIACFGDLPALCSQLHLPAQSGSDNVLARMGRGYTREEYLEKVRALRAV 295 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ IVGFPGETEE+FQ L ++E R + F YSP G A L D + Sbjct: 296 RPDIVFTGDMIVGFPGETEEEFQETLSLMEEVRYIDLFSFAYSPRPGTRAAELADDLSRG 355 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 K+ R R LQ++ + E +G V+++ + ++ + V +G Sbjct: 356 EKQSRLERLQALQKRTTMEINDVLLGTRQTVLVEREGKRPGQ---ISGKADNGRTVNFSG 412 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + ++ G + +++ + L G Sbjct: 413 DRSL-IGTFVDLRIIQVFQNSLLGEL 437 >UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 Length = 474 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 113/449 (25%), Positives = 201/449 (44%), Gaps = 26/449 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTEL-RTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ + GC N DS +I L T G ++ + +DAD++++NTC + A ++ Sbjct: 3 KKLHIKTWGCQMNEYDSSKIADLLGSTHGLELTDNAEDADVLLLNTCSIREKAQEKVFHQ 62 Query: 67 IGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +G + + V GC+ ++E + IRE V I GP + ++ E + Sbjct: 63 LGRWKMLKEAKPDLIIGVGGCVASQEGEHIRERASFVDIIFGPQTLHRLPEMIDSARSSH 122 Query: 121 KHNPFLSLVPEQGVKLTPRHYA-----YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 +S + P A ++ I EGCN CT+C++P RG VSRP +VL Sbjct: 123 GPVVDVSFPEIEKFDRLPEPRADGATAFVSIMEGCNKYCTYCVVPYTRGAEVSRPCDDVL 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 E +L GV+E+ ++ Q+ +AY + S L ++ + Sbjct: 183 FEIAQLAAQGVREVNLLGQNVNAY--------RGATFDGGICSFAELLRLVAAIDGIDRI 234 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P DD++ + + +++ +L +P+Q S RIL LMKR + A I++ R Sbjct: 235 RFTTSHPIEFSDDIVAVYEDTPELVSFLHLPVQSGSDRILNLMKRTHTALEYKAIIRKLR 294 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P++ + S FIVGFPGET++DF+ + + E D F +S G A + D V Sbjct: 295 RARPDIQISSDFIVGFPGETQQDFEQTMQLIAEVDFDMSYSFIFSARPGTPAADMLDDVA 354 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 EE K++R + Q + + +G ++++ + + ++ E + V Sbjct: 355 EEEKKQRLYILQERINQQAMRYSRHMLGTVQRILVEGTSRKNVM--ELSGRTENNRVVNF 412 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ + G + V++ L G V Sbjct: 413 AGQPEM-IGRFVDVEITGVLPNSLRGVVV 440 >UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Opitutaceae RepID=MIAB_OPITP Length = 480 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 120/480 (25%), Positives = 205/480 (42%), Gaps = 58/480 (12%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ + GC N DSE + LR GY +V +D D++++NTC D+A Q+++ Sbjct: 1 MNRVHIKTYGCQMNERDSEAVAAMLRARGYRIVADENDCDILLLNTCSVRDAAEQKAIGK 60 Query: 67 IGEALNENGK-----VIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 G K + + GC+ + + + P V I G + QV ++ + Sbjct: 61 AGYLQQRKKKQPDFVLGILGCMAQNRGASLLDQLPDVDLIVGTQKFHQVPGYLDNLRAAR 120 Query: 121 KHNPFLSLVPEQGVK-----------------------------------LTPRHYAYLK 145 + + P+ A++ Sbjct: 121 DAGVPIGETIVDIGEEAGSQNTIKDHLLPQDSDSDSQPSTLNSQLRGAAAPPPQITAFVS 180 Query: 146 ISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKH 205 I +GCN C FCI+P RGD SRP+ +++ E ++L GV+E+ ++ Q ++YG Sbjct: 181 IQQGCNMDCAFCIVPKTRGDERSRPMDDIVRECEQLAARGVREVTLLGQIVTSYGRRDYT 240 Query: 206 RTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDI 262 T + V L E++ L R+ + P+P DD++ K+ Y+ + Sbjct: 241 HTNGISP------FVQLLERVHALDGIERIRFTSPHPRGFKDDLVAAYGRLPKLCGYVHL 294 Query: 263 PLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDF 322 PLQ S RIL+ M RP + +R + R + ++ + IVGFPGET+EDF+ + Sbjct: 295 PLQSGSNRILRAMNRPYTRERYREIVDALRAVRSDMYFSTDVIVGFPGETDEDFEQTREL 354 Query: 323 LKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGRE 382 + D FKYS G A DQVPE+VKE+R ++L +Q S R + Sbjct: 355 FEACNYDMAYVFKYSVRTGTPAAERGDQVPEDVKEQRNQLLLELLRQNSERRNALLLDTV 414 Query: 383 ILVIIDEVDEEG--AIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+++ D+ G GR+ + V + T G ++ +++ A L+G Sbjct: 415 EEVLVEGPDKTGQRFTGRTRGNR------VCIFEATPDLVGRLVSLRITRASVSTLYGEL 468 >UniRef50_B0P6Q6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6Q6_9FIRM Length = 441 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 155/444 (34%), Positives = 240/444 (54%), Gaps = 23/444 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G VSLGC KN VD+ER+L ++ GY++ D+VI+NTCGFI+ A +ES+E I Sbjct: 4 KVGMVSLGCSKNQVDAERLLAQIEKGGYEICTDASQCDVVIINTCGFIEDAKRESIETIL 63 Query: 69 EALNEN-----GKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 E ++VTGCL + + + P+ + G +L + + K Sbjct: 64 EFAQLKTGGALRALVVTGCLAERYREQVAAEIPEADVVLGIGCNADILGAIERALHGEKT 123 Query: 123 NPFLSLV----PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F + V ++AYLK++EGC++RC++C IP +RG SRP+ +++EA Sbjct: 124 VAFGEKEALSLEGERVLANEPYFAYLKVAEGCDNRCSYCAIPLIRGPFRSRPMENIVAEA 183 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 +RL GV E+ V++QDT+ YG D+ R ++ L E+L +L W R+ Sbjct: 184 QRLAACGVTELNVVAQDTTRYGEDLYGRL----------ALPELLEKLCRLDGVRWVRML 233 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D ++ +MA E KI+ Y+DIP+QH + RIL LM R G A +++ R Sbjct: 234 YCYPDRITDRLLDVMAREEKIVKYMDIPIQHVNGRILSLMNRRGDAGSLTALMEKIRARV 293 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + LR+T I GFP ET+ +F+ L +F++ R +R+GCF YS E A + Q+ EE Sbjct: 294 PGVVLRTTLITGFPTETQGEFEELCEFVQRVRFERLGCFAYSAEEDTPAALMDGQLDEEE 353 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K R M+ Q + + ++GR + V ++ + GRS DAP+ID VY +G Sbjct: 354 KRRRAQIIMEQQYGVMEGFNRSQIGRRLTVAVEGREGRLWYGRSYMDAPDIDSRVYFSGH 413 Query: 416 TNVKPGDILRVKVEHADEYDLWGS 439 PGD + V+++ + YDL G Sbjct: 414 GPYSPGDYIEVEIDGVEGYDLKGK 437 >UniRef50_A8UT74 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UT74_9AQUI Length = 422 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 165/439 (37%), Positives = 248/439 (56%), Gaps = 22/439 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+G +SLGC KNLVDSE +L L++ G ++ + AD ++VNTCGFI+ A +ES++ I Sbjct: 1 MKVGVISLGCSKNLVDSEILLARLKSAGVELTSDIESADCIVVNTCGFIEDAKRESIDTI 60 Query: 68 GEALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 EA++ KV+V GCL + ++ + +V G S++++L+H+ Sbjct: 61 LEAIDTGKKVLVMGCLVERYRKELEKELTEVEGFFGTQSWDEILKHLG---------LQP 111 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 + TP YAY+KI+EGCN C+FC IP +RG +SRP+ +++SE K L GV Sbjct: 112 KYSAPYRLLTTPTSYAYVKIAEGCNRLCSFCAIPKIRGRHLSRPVEDIVSEVKDLASRGV 171 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 KEI ++SQDT+ YG D+ + + W RL Y+YP D Sbjct: 172 KEIDIVSQDTTYYGKDLYREYRLTELLKELEEVEGI--------EWIRLLYLYPTEVSDQ 223 Query: 247 VIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 +I + + K+LPY D+P+QH S ++LK M+R I++ R PE LR+T I Sbjct: 224 LISYIRDSEKVLPYFDMPIQHISSKVLKSMRRGYDEGFVRRLIEKIRSEIPEAVLRTTLI 283 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VG+P E EEDF+ LL+F++E +G F YSP E A L D +P+E+KEER ++ Sbjct: 284 VGYPNEDEEDFRRLLNFVEEGHFHWLGVFTYSPEEDTGAFPLGDPLPQELKEERKETLIE 343 Query: 366 LQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPEIDGAVYLNGETNVKPGD 422 Q++I+A + VG+ VI+D E + GR+ APE+DGAVY+ E +K GD Sbjct: 344 AQRKITARKNASLVGKRFKVIVDGFSSEFSFVPKGRAYLHAPEVDGAVYIESEEPLKVGD 403 Query: 423 ILRVKVEHADEYDLWGSRV 441 + V++ A +YDL G V Sbjct: 404 RVEVEITQATDYDLGGRVV 422 >UniRef50_B2KB59 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Elusimicrobium minutum Pei191 RepID=RIMO_ELUMP Length = 430 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 153/442 (34%), Positives = 237/442 (53%), Gaps = 19/442 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 KI +SLGC KNL D+E +L L + + +V +AD +++NTC FI A +E+ Sbjct: 1 MAKIFTISLGCSKNLTDTEEMLGILNHKKHYLVADESEADTILINTCAFIKPAREEADRE 60 Query: 67 IGEALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I A K+IV GCL KE + + +P V G E++ + Sbjct: 61 IKRASKLKAQGKIEKLIVAGCLTQKEGKSLPSKYPLVDAFIGLKGIEKIDNVIKRPKHSF 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 P P+ ++LT H AYLK+++GCN+RC +C IP++RG S+ + ++++EAK Sbjct: 121 CPAPDYIKAPDFKLQLTAPHSAYLKVADGCNNRCAYCTIPAIRGPFRSKSMEDIVAEAKA 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 + GVKEI +I+QDT+AYG D+ + + + W R+ Y YP Sbjct: 181 MEKNGVKEISLIAQDTTAYGQDIFGKPSLVKLLKKLVKIKGI--------EWFRIMYAYP 232 Query: 241 YPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D++ +A E KI YLD+PLQH S +LK M R + D A+IK R+I P ++ Sbjct: 233 ETVTKDLLDFIACEPKICRYLDMPLQHISAPVLKAMNRRSTEDEVRAKIKLIRQIVPGMS 292 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 LR+ FI GFPGET EDF+ L F+ EA+ + VG F YS +G A + QV E++K++R Sbjct: 293 LRTNFIAGFPGETAEDFEKLKKFIAEAKFNNVGVFAYSKEDGTPAAVMKRQVAEKIKKQR 352 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVK 419 + Q ++ ++ G+ + V++D + GRS +D+P+IDG V + G K Sbjct: 353 VEELVSAQSRVIDSINRKLKGKTVKVLLDNL----FCGRSESDSPDIDGRVEVKGNKKYK 408 Query: 420 PGDILRVKVEHADEYDLWGSRV 441 GD ++VK+ A Y+ G + Sbjct: 409 AGDFVKVKITSAKGYNRTGKII 430 >UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EE1 Length = 456 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 204/448 (45%), Gaps = 28/448 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 PK S GC +++ D E+I L G ++ADM+I+NTC ++A + Sbjct: 20 PKAYVRSFGCQQSVSDGEKIKGLLGLMGCSFTEDENEADMIILNTCAVRENAEDRVFGIV 79 Query: 68 GEALN-----ENGKVIVTGCL---GAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + + + GC+ ++I++ +P+V + G + + + + Sbjct: 80 GSMKKLKELKPSLIIGIAGCMTAQSHVAEKIKKSYPQVDFVMGTSAISSLPHLLLECLNG 139 Query: 120 P----KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + A + + GCN+ CT+CI+P +RG SR +++ Sbjct: 140 AKFSADISEYDDFSAVVPQIRDSSFKASVPVMFGCNNFCTYCIVPYVRGRERSRQPQDII 199 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 +E + LV G KEI+++ Q+ ++YG D+++ + L +L K+ W Sbjct: 200 NEVRGLVRDGYKEIMLLGQNVNSYGKDLENGM----------TFPQLLRELDKIEGDFWI 249 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R +P + + + K+ +L +P+Q S +L+ M R +V++ + + R Sbjct: 250 RFMSSHPKDATKKLADAIFDCTKVAKHLHLPVQSGSNDVLRRMNRRYTVEKYMETVDYIR 309 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + P+ +L + IVGFP E +EDF+ LD ++ + D + F YS G A + D + Sbjct: 310 QRDPDFSLTTDLIVGFPDEKDEDFEATLDIIRRVKYDNIYSFIYSKRTGTKAAEMDDPIT 369 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +E K R R +++Q++IS+E + +GR + V+ D ++ + V Sbjct: 370 DEEKGMRMRRLLEVQREISSEHYKRFIGRTMRVLADGKAKKREGWLT--GKSSEFIIVEF 427 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSR 440 G++++ G + V++ A + + G Sbjct: 428 EGDSSL-IGQFVDVEITDAMNWAVSGVI 454 >UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0W4_ACIC5 Length = 448 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 29/452 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 + + GC N+ DSE+++ L+ +GY V AD+++ NTC D A Q+ Sbjct: 10 SSGKTFYLETFGCQMNVHDSEKVIGTLQQQGYTQVEEEAAADLILYNTCSIRDKAEQKVF 69 Query: 65 EAIGEALN---ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + + + V GC+ +E + I E P V ++G SY ++ E + Sbjct: 70 NRLNDYKKLHAQGKRFGVLGCVAQQEGEKIFERAPYVSLVSGSASYRKLPEMLVQLEAGA 129 Query: 121 KHNPFLSL------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 L + + H Y+ I EGC+ C +C++P RG SR V Sbjct: 130 SRITGLDDRQTEETFETEFTARSNAHRGYITIIEGCDKFCAYCVVPYTRGKERSRKSSSV 189 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L+EA+R+ +AG EI ++ Q+ ++Y + K S L + ++ R Sbjct: 190 LAEARRMAEAGYTEIQLLGQNVNSY-----------HDPEGKKSFAELLAAVGEVPGIVR 238 Query: 235 LHYV--YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 + + +P D++ + A + ++ +P+Q S R+L+LM+R + ++ L +I Sbjct: 239 VRFTTSHPRDFTRDIVEAIDAVPALCDHVHLPIQSGSSRVLQLMQREYTREQYLEKISWI 298 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 + +++ + IVGFPGET +DF+ + E + D + FKYSP A + D + Sbjct: 299 KTARRPISMTTDMIVGFPGETPDDFEETITLAAEVQYDGIFAFKYSPRPNTPAIHMSDSI 358 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGA 409 PEE K R + Q++I VG + V+++ + IGR+ + Sbjct: 359 PEEEKSMRLQILLDRQREIQRINYARHVGEVMDVMVEGHNHARGQVIGRTSQNKTLNFTT 418 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + PG L+V+V + L G V Sbjct: 419 ---SQPILPAPGSYLKVRVTRSLPNSLVGEAV 447 >UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Campylobacterales RepID=MIAB_ARCB4 Length = 436 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 121/447 (27%), Positives = 213/447 (47%), Gaps = 21/447 (4%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRT-EGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 ++ K+ +LGC N DS+ I EL +GY + +DAD++I+NTC + VQ+ Sbjct: 1 MSSNKKLFIQTLGCQMNDTDSQHIQAELEKHKGYVTTQNIEDADLIIINTCSVRERPVQK 60 Query: 63 SLEAIG---EALNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 IG + E K+ V GC I + P V + G + ++ + V Sbjct: 61 LFSEIGQFNKKKKEGAKIGVCGCTASHLGQDIIKRAPYVDFVVGARNISKIKDVVDVKGA 120 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 E T ++ A + IS GC+ +CT+CI+PS RG+ +S P ++ + Sbjct: 121 VEVSIDNDESTYEFSTAKTNKYRASVNISVGCDKKCTYCIVPSTRGEEISIPPEMIVEQV 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 ++ V+ G E++++ Q+ ++YG + K + L + +SK+ R+ + Sbjct: 181 RKSVEQGAVEVMLLGQNVNSYGRKFSD-------KREKYTFTKLLQDVSKIDGLERIRFT 233 Query: 239 YPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 P+P D+ I A KI + +PLQ S +LK MKR S + L R + RE+ Sbjct: 234 SPHPLHMDDEFIEEFAKNPKISKCIHMPLQSGSTSVLKAMKRGYSKEWFLNRASKMRELV 293 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-VPEE 354 P L + + IV FPGET+EDF LD +++ + D++ FKYSP G +A L D+ +P+E Sbjct: 294 PNLRITTDIIVAFPGETQEDFLDTLDVVEQVKFDQIFNFKYSPRPGTEALNLKDKELPDE 353 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNG 414 + +R ++L ++ E + + +G + ++++ + G + + V+ G Sbjct: 354 IGSQRLIDLIELHKRYLEESMPKLIGETLNILVESLKPNGEV----CGYTDNYLQVFAKG 409 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + G + VK+ L G V Sbjct: 410 SDELL-GKFVNVKITDVTRTSLKGEVV 435 >UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Bdellovibrio bacteriovorus RepID=MIAB_BDEBA Length = 453 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 35/449 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG- 68 + + GC N+ D+ER+ L + + V A ++I+N+C + V + +G Sbjct: 23 VYISTYGCQMNVNDTERMYALLEMQNFVPVTDPKKASLIIINSCSVREKPVHKVYSEVGT 82 Query: 69 ----EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + N K+ V GC+G +E + + + P + + G + + + V + Sbjct: 83 YKYMKRKNPELKIGVGGCVGQQEKENLMKTQPMIDFVFGTDQIDSLPQLVAKSFAGERRL 142 Query: 124 PFLSLVPEQGVKLT-----PRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + P Y+ I++GC++ CTFC++P RG SRP+ +L++ Sbjct: 143 VNSRFEHRSPYHIETLVRNPGVATYVNITKGCDNFCTFCVVPYTRGREKSRPVQHILTDI 202 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + LV GVKE+ ++ Q+ ++Y D L +++K R+ Y Sbjct: 203 RHLVKRGVKEVTLLGQNVNSYQGDEG------------IDFADLLAKVAKETDVERIRYT 250 Query: 239 --YPYPHVDDVIPLMAE--GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 +P ++ +MAE KI+ Y+ +P Q S ++L+ M R + + L RI ++ Sbjct: 251 TSHPKDFNQKLVDVMAEHSNKIMEYIHLPFQAGSTKVLERMNRNYTREEYLERIAMIQKG 310 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + + IVGFPGETEEDFQ L+ + E + + F YSP A DQ+PE+ Sbjct: 311 LPNVCFSTDIIVGFPGETEEDFQDTLNMVTEVGFETIFAFSYSPRPFTKAAKFEDQLPED 370 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVYL 412 VK ER NR + + ++ ER++ G + V+++ VD + GRS + V+ Sbjct: 371 VKNERLNRLFDVHEAMAFERVKRYEGTTMKVLVENVDRDHGKMQGRSTGNK-----LVHF 425 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 G ++ G + VK+ A G + Sbjct: 426 LGTADL-IGKTVDVKITKAFPAVFRGEMI 453 >UniRef50_Q6MBU9 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Chlamydiales RepID=RIMO_PARUW Length = 475 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 163/447 (36%), Positives = 263/447 (58%), Gaps = 22/447 (4%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI F+SLGCP+NLVDSE +L L GY+V P+ ++AD +++NTCGF++++ QES++ + Sbjct: 37 KINFISLGCPRNLVDSEVMLGILLKAGYEVAPTLEEADYLVINTCGFLEASRQESMDTVE 96 Query: 69 E---ALNENGKVIVTGCLGAKEDQIREV-HPKVLEITGPHSYEQVLEHVHHYVPKP---K 121 E + K+IVTGC+ + P + + G E +L+ V Sbjct: 97 EVLSQRKKTAKLIVTGCMVQTHSDALKTTFPSIDYLLGSGDVEGILKAVQSTQKGQIISS 156 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 +L TP+HYAYLKI+EGC RC +C+IP+++G L S+ ++L E L Sbjct: 157 ARSYLEAGEVPRRLSTPKHYAYLKIAEGCRKRCAYCVIPTIKGPLKSKGKEQILKEFNLL 216 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHYVY 239 + GVKE+++I+QD YG D G T++++L + + ++ W RL Y+Y Sbjct: 217 LSQGVKEVILIAQDLGDYGKD--------QGAKKLTALLNLLQSMLEIKQAFWLRLLYLY 268 Query: 240 PYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D++I LM + +I PYLD+P+QH + +ILK M+R S + + I + R P + Sbjct: 269 PDEITDELIALMKSDSRICPYLDMPIQHVNNQILKSMRRATSKEDIIEIITKLRREIPNV 328 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 +R++ IVGFPGETEE FQ L+ F+++ L+ VG FK+S G+ A LP+Q+ +E+KE+ Sbjct: 329 AIRTSLIVGFPGETEEQFQELIQFVQDYPLENVGIFKFSREPGSHAYDLPNQISDEMKED 388 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNGE 415 R++R MQ+Q+++ + L++ +G++I V+++ E IGR P+IDG V +N Sbjct: 389 RYHRLMQVQKKVVKKNLKKMIGKKIAVVVEGYHPETELLMIGRHTGQCPDIDGQVLINDG 448 Query: 416 TNVKP-GDILRVKVEHADEYDLWGSRV 441 VK G+I V++ +YDL G + Sbjct: 449 RKVKAFGEIYTVEITDVADYDLVGHVI 475 >UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=27 Tax=Clostridiales RepID=MIAB_CLOPH Length = 456 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 116/451 (25%), Positives = 215/451 (47%), Gaps = 36/451 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + GC N DSE++ L T GY ++AD V+ NTC ++A IG Sbjct: 20 TFNVQTFGCQMNAKDSEKLAGILETIGYVE-SDSEEADFVVYNTCTVRENANTRVYGRIG 78 Query: 69 -----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + N + ++ + GC+ + ++I++ + V + G H+ ++ E ++ Sbjct: 79 FLGNLKKKNPHMRIALCGCMMQESHVVEKIKKSYRFVDIVFGTHNIFKLAELIYARHTTK 138 Query: 121 KHNPFLSLVPEQGVKLTP-----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K + ++ V+ P + A + I GCN+ C++CI+P +RG SR +++ Sbjct: 139 KMVIDIWKETDKIVEELPSEQKYKFKAGVNIMYGCNNFCSYCIVPYVRGRERSRNPEDII 198 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E K+LV GV E++++ Q+ ++YG + S L + + ++ R+ Sbjct: 199 KEIKQLVSKGVVEVMLLGQNVNSYGKTLDE----------PVSFAQLLQMVEQVEGLKRI 248 Query: 236 HYVYPYP--HVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 ++ P+P +DVI +M K I ++ +P+Q S +L M R + + L + + + Sbjct: 249 RFMTPHPKDLSNDVIEVMKNSKKICNHIHLPVQSGSTELLMKMNRKYTKEDYLNLVDRIK 308 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P ++L + IVGFPGETEEDF LD +++ D F YS G A + +Q+P Sbjct: 309 MAMPNISLTTDIIVGFPGETEEDFLDTLDVVRKVGYDSAYTFIYSKRSGTPAATMENQIP 368 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGA 409 EEV ER+ R + ++ S++ ++ G+ V+++EV+E+ GR + Sbjct: 369 EEVANERFQRLLTTIRESSSKISKDDEGKIAEVLVEEVNEQDNSLMTGRLSNNV-----L 423 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+ G + G+I+ VK+ + G Sbjct: 424 VHFKGTKEL-IGNIVSVKLSECKGFYYMGEM 453 >UniRef50_Q1JYQ2 MiaB-like tRNA modifying enzyme n=2 Tax=Desulfuromonadales RepID=Q1JYQ2_DESAC Length = 428 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 103/438 (23%), Positives = 196/438 (44%), Gaps = 21/438 (4%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + V+LGC N +S + LR +GY +VP A++VIVNTC + +S + + Sbjct: 4 VSIVTLGCKANQFESAAMERMLREQGYQIVPFEQGAELVIVNTCTVTSATDAQSRKLVRR 63 Query: 70 ALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 A NG +++VTGC + Q P V+ + G + +++ + P+ + S Sbjct: 64 ARRLNGQCRIVVTGCYAQIQPQQIAELPGVMYVIGNSEKQDLIDILCQEGPQVQVGDIAS 123 Query: 128 L---VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + + A+++I GCN C++CIIP RG S V+ + +LV Sbjct: 124 QQQCPDLKIASFSEHSRAFVQIQSGCNAFCSYCIIPYARGRSRSVNTSAVVDQVNQLVAG 183 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV 244 G +E+++ YG D+ + + + +L Q G RL + P Sbjct: 184 GYREVVLTGIHIGNYGQDLTPQCTLTD------LLNALLTQTD--GCRIRLGSIEPQEVN 235 Query: 245 DDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRST 303 + +I + +I P+ IPLQ +L+ M R S+ + ++ + P +++ Sbjct: 236 EALIDCVQHSSRICPHFHIPLQSGCDDVLQQMNRHYSIRQFHDTVELLCQKIPRVSIGID 295 Query: 304 FIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRF 363 I GFPGETE + +F+ + + F +S G A +PDQ+P ++ ++R Sbjct: 296 VISGFPGETEAQHRHTCEFISSLPVHYLHVFPFSARPGTPAATMPDQIPGDIAKQRAAEL 355 Query: 364 MQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNGETNVKPGD 422 L ++ +++ ++ +GR + V+++ + G S V + GE G+ Sbjct: 356 RVLAEEKASQYREQFIGRLVDVVLESRTKNNQWQGTSAEYLT-----VLVAGEQGA-AGE 409 Query: 423 ILRVKVEHADEYDLWGSR 440 ++ V++ + L G+ Sbjct: 410 LVSVEIVGVSQNFLVGTL 427 >UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L7_9BACT Length = 434 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 172/444 (38%), Positives = 248/444 (55%), Gaps = 21/444 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + +SLGCPKN VDSE + L G+ +V S ++AD+ +VNTCGF+ +AV+E ++ Sbjct: 1 MKNLHIISLGCPKNAVDSEHLGGVLEAAGFRLVGSAEEADVALVNTCGFLQAAVEEGIQV 60 Query: 67 IGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I + ++ V GC+ + D+++ P V + +L + VP Sbjct: 61 ILDLERLKKAGVVRQIAVVGCMLNRYGDELKAEFPTVDFWAKSEDWGALLREMGRGVPAA 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + L + TP YLKISEGCN RC++C IP +RG L S P+ +++ EA+R Sbjct: 121 AESGCL----RADLAGTPWTR-YLKISEGCNSRCSYCAIPGIRGRLRSVPVEQIVGEARR 175 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 LVD G KE+ ++ Q+ S YG D+ R P ++ E+ G+W RL Y++P Sbjct: 176 LVDEGAKELCLVGQELSIYGSDLFGR-------PSLPRLLDELEKELPRGVWLRLFYLHP 228 Query: 241 YPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 + + A ILP+LDIP+QH +L+ M RP + REI P+ Sbjct: 229 SLVDAVFLERVAASPVILPWLDIPIQHVDDDVLRRMNRPPVERHIRELFARGREINPDFA 288 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEER 359 R+T +VGFPGET F LLDF++E DR+G F YSP +G A + PDQ+PEE K R Sbjct: 289 FRTTLMVGFPGETRAQFDKLLDFVEEIGFDRLGAFPYSPEDGTPAASFPDQIPEEEKTAR 348 Query: 360 WNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA--IGRSMADAPEIDGAVYLNGETN 417 +N M+LQ+Q+S R VG E+ V+IDEVDEE +GRS DAPEIDG V + G Sbjct: 349 YNELMELQRQVSLTRQAHFVGHELNVLIDEVDEETGERVGRSFRDAPEIDGVVTVTGAGR 408 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 +PGD++RVK+ + EYDL G + Sbjct: 409 ARPGDMIRVKITASSEYDLSGEAI 432 >UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostridiales RepID=A9KKS8_CLOPH Length = 466 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 113/446 (25%), Positives = 201/446 (45%), Gaps = 22/446 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F++LGC N ++E + G +V + +D+ +VNTC + A ++S + + Sbjct: 21 KKVAFLTLGCKVNSYETEAMQQLFLDAGATIVDFEELSDIYVVNTCTVTNIADRKSRQML 80 Query: 68 GEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP----- 120 +A N N VI GC + V + G + +++ V Y Sbjct: 81 HKAKKNNPNSVVIAVGCYVQAAKEALLEDDTVDLVIGNNKKNEIVSLVDEYYDNQSNYAV 140 Query: 121 -KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + +T + AY+KI +GCN C++CIIP RG + SR E+ E Sbjct: 141 IDIDNDFEYEELAIAAVTEKTRAYIKIQDGCNQFCSYCIIPYARGRIRSRSEEEIKKEVM 200 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHN--GEPVKTSMVSLCEQLSKLGI--WTRL 235 RLV+ G +EI++ S+YG++ E + +++L LS++ RL Sbjct: 201 RLVENGYQEIVLTGIHLSSYGLETLSVKEQAALLPENGISPLMTLILSLSEIEGLNRIRL 260 Query: 236 HYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P ++ + +A K+ P+ + LQ L M R + D R + R Sbjct: 261 SSLEPRIITEEFVKTLARSKLCPHFHLSLQSGCKETLVRMNRKYTPDDYYKRCEIIRTYY 320 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 + + IVGFPGETEE+F+ FL++ + ++ FKYS +G A A+P+QVPE++ Sbjct: 321 ENPAITTDVIVGFPGETEEEFEDTKAFLEKVQFSQMHIFKYSKRKGTKAEAMPNQVPEQI 380 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDE----VDEEGAIGRSMADAPEIDGAVY 411 K +R ++++ A+ L +G +V+ +E D IG + V Sbjct: 381 KSKRSENLFDSEKKMRAKYLDSFIGINEIVLTEEETMIEDTLYMIGHTTRYV-----KVA 435 Query: 412 LNGETNVKPGDILRVKVEHADEYDLW 437 + N+K +++ V++ D+ Sbjct: 436 IPVS-NLKSNELVNVRITGYLNEDVM 460 >UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDK5_DESAH Length = 460 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 121/463 (26%), Positives = 219/463 (47%), Gaps = 38/463 (8%) Query: 2 SKVTPQPK--IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 T PK ++GC N D+ER+ L GY AD+++ NTC + A Sbjct: 6 KIHTENPKGYAYIYTIGCQMNTYDTERLFFILGGLGYVKTNDLHRADIIVCNTCSIREKA 65 Query: 60 VQESLEAIGE-----ALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV 113 +++ +G + I+TGC+ +E +++ + + + + G ++ ++ H+ Sbjct: 66 QEKAFSFLGRVPPLKKAKPHLITIMTGCVAQQEAEEVFKRNACIDIVLGTQAFSRLGGHI 125 Query: 114 HHYVPK-------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + + +P+ + ++ I +GC++ CT+C++P +RG Sbjct: 126 MNVLNGRGQITDVEDSPAIYEAMPDFSFIDNDKVSRFVTIMQGCDNFCTYCVVPYVRGRE 185 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 SR ++ E L DAGVKE+ ++ Q+ ++YG + S L EQ+ Sbjct: 186 RSRTPESIVEEISILADAGVKEVTLLGQNVNSYGQ-----------KEQICSFSDLLEQI 234 Query: 227 SKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 S++ R+ + +P DD+I + + K+ L +P+Q S RILK M R + ++ Sbjct: 235 SRVSGIERIRFATSHPKDLSDDLIYAIRDIDKVCNQLHLPVQSGSNRILKKMNRGYTKEQ 294 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 L R+ + R+ CP + L S I+GFP ET DF +D ++ D + F YS A Sbjct: 295 YLERVGKLRKNCPSIALSSDMIIGFPSETRADFDETMDLVRRVEFDGIFAFAYSDRPQAP 354 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMA 401 A+ D V + K ER N +Q Q +++ ++ Q VG V+++ + + G + + Sbjct: 355 ASKFSDGVEDAEKMERLNELIQFQDEMTHQKNQALVGAWEQVLVEGLSQKKRHDEGENPS 414 Query: 402 DAPEIDGA------VYLNGETNVKPGDILRVKVEHADEYDLWG 438 D P++ G V+ G NV PG+IL VK+++A + LW Sbjct: 415 DFPQMTGRTESGKIVHFYGN-NVCPGEILDVKIKYAYPHSLWA 456 >UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae RepID=CK5P1_ARATH Length = 640 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 128/493 (25%), Positives = 220/493 (44%), Gaps = 55/493 (11%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAV 60 S + + +I + GC N+ D E +L ++ GY +VV + A+++ VNTC ++A Sbjct: 123 SDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAE 182 Query: 61 QESLEAI----------------GEALNENG-KVIVTGCLGAK-EDQIREVHPKVLEITG 102 Q + + G A + KV+V GC+ + +D+I + V + G Sbjct: 183 QRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCG 242 Query: 103 PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTF 156 P +Y + + K L + E ++P A++ + GCN+ C F Sbjct: 243 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAF 302 Query: 157 CIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE--- 213 CI+P RG SRP+ ++ E L ++GVKE+ ++ Q+ ++Y D R N E Sbjct: 303 CIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESGANWEYSE 362 Query: 214 ---------PVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAEG-KILPYLD 261 + L ++LS R + P+P D+++ LM + I + Sbjct: 363 GFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIH 422 Query: 262 IPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLD 321 +P Q + RIL+ M+R + + L +K+ R I P++ + S FI GF GETEE+ Q L Sbjct: 423 LPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLS 482 Query: 322 FLKEARLDRVGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVG 380 ++ D F YS E A+ D VPEEVK+ R + ++ + +VG Sbjct: 483 LVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVG 542 Query: 381 REILVIIDEVDEE----GAIGRSMAD-------APEIDGAVYLNGET---NVKPGDILRV 426 LV+++ ++ IG++ P D A L+G+ N GD + V Sbjct: 543 STQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFVEV 602 Query: 427 KVEHADEYDLWGS 439 ++E + L+G Sbjct: 603 QIEKSTRASLFGE 615 >UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Parachlamydiaceae RepID=MIAB_PARUW Length = 450 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 121/449 (26%), Positives = 202/449 (44%), Gaps = 24/449 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + K + GC N +DSE ++ +L G +DAD++I NTC D A ++ Sbjct: 13 MRSLKKFFVKTYGCQMNELDSEIMIGQLENRGLTRSHDENDADLLIFNTCSIRDLAERKV 72 Query: 64 LEAIGEA---LNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 + +G+ + VTGC+ + + + P + + G ++ + + + Sbjct: 73 MGKLGKLGLTKQSQAIIGVTGCMANAKKDSLFQKLPHIDFVLGTNNIHDLNHVLDEVLAS 132 Query: 120 PKHNP-----FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K + F + K + AY+ I GC+ CT+C++P RG VSR + Sbjct: 133 GKQSIRTDDHFEFELDYLNAKREDQIKAYVSIIRGCDKFCTYCVVPYTRGSEVSRAPENI 192 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--W 232 L E + LV+ G KEI ++ Q+ ++YG D K L QL K+ Sbjct: 193 LEECRHLVNQGYKEITLLGQNVNSYGKD---------KLEWKCLFHDLLYQLDKIPGLER 243 Query: 233 TRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R +P +++ + + K + ++ PLQ S R+LK M R +V++ L +++ Sbjct: 244 VRFMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQML 303 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 +EI P + L + IVGFP ETEE+FQ LKE F YSP +G A D V Sbjct: 304 KEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPAMRWRDDV 363 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 PEEVK++R R +QLQ I + Q +G+ + V+++ + + R + V Sbjct: 364 PEEVKQDRLQRLLQLQDTIYMKHRQAFLGQTVEVLVERRNFKDD--RLVKGRTRCWKNVL 421 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSR 440 G + G + +VK+ L G Sbjct: 422 FTGGDEL-VGTMQQVKIHGYSHQTLLGDL 449 >UniRef50_C0QIB5 2-methylthioadenine synthetase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QIB5_DESAH Length = 441 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 157/448 (35%), Positives = 237/448 (52%), Gaps = 21/448 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 I SLGC +N VDSE +L L + G+ +V AD++IVNTCGFI +A E+++ I Sbjct: 1 MMIFLESLGCCRNQVDSEVMLGRLASAGHGIVHDPSQADVIIVNTCGFISAASAEAVDTI 60 Query: 68 GEALNEN-----GKVIVTGCLGAK--EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + +++VTGCL + D + P+V G + ++++ V Sbjct: 61 LDMAVYKRDGRCKRLVVTGCLPERFKHDDLGGELPEVDVFLGTGACDEIVRVVEST--GS 118 Query: 121 KHNPFLSLVPEQGVKLTPR-----HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 L + PR + A++KISEGC+ CT+CIIP +RG SR + V+ Sbjct: 119 MVLVPDVLARQMQGHPLPRCLTLDYLAHVKISEGCDRHCTYCIIPRLRGIQRSRGVDAVV 178 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 +E++ LV GVKEI+++ ++TS YGVD+ N + T++ + L +W RL Sbjct: 179 TESELLVKNGVKEIVLVGENTSDYGVDLDGEV---NLAGLLTTLSQRIKALDP-DVWIRL 234 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y +P DVI ++A + Y D+P+QHAS RIL+ M R + + I R+ Sbjct: 235 LYTHPSSLDFDVIRVIAGLDNVCTYFDVPIQHASSRILRRMGRNYTREDLDRLIAFIRKT 294 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P+ LR+T I GFPGETE DF LL F+KE R D++G F YS + ++ L D V EE Sbjct: 295 APDAALRTTLITGFPGETEADFNELLAFVKEIRFDQLGVFAYSDSDDLASHGLKDHVDEE 354 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDE-VDEEGAIGRSMADAPEIDGAVYLN 413 E R + M Q +IS + +G+ V+++E DE +GR+ APE+DG ++ Sbjct: 355 TGEARRDAIMAAQAEISESLNEAYLGKTFTVLVEENPDEGIFLGRTNFQAPEVDGITFIY 414 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 G N+ G +RVK+ YDL G V Sbjct: 415 G-ENIDIGTFVRVKITETHAYDLVGELV 441 >UniRef50_B3ES11 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=28 Tax=cellular organisms RepID=MIAB_AMOA5 Length = 486 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 109/458 (23%), Positives = 195/458 (42%), Gaps = 28/458 (6%) Query: 5 TPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 T + S GC N+ DSE +++ LR G+++ +Y+ AD++ +NTC D A Q Sbjct: 32 TITRNLYVESYGCQMNIADSEVVVSILRPHGFEITDTYEKADVIFINTCAIRDKAEQTVR 91 Query: 65 EAI-----GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + + + N + + V GC+ + Q + E V + GP +Y + + Sbjct: 92 KRLSQFNQLKRRNPDLVIGVLGCMAERLKQTLLEEEKLVDLVAGPDAYRDLPRLLATVDS 151 Query: 119 KPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 K E ++P A++ I GC++ C+FC++P RG SR Sbjct: 152 GHKAINTFLSREETYADISPIRLNSNGVSAFISIMRGCDNMCSFCVVPFTRGRERSRDPY 211 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGV--DVKHRTGFHNGEPVKTSMVSLCEQLSKL- 229 ++ EA L + G +E+ ++ Q+ +Y + + + + L ++++ Sbjct: 212 SIVKEATELFEQGYREVTLLGQNVDSYKWSPNTDKKEQPTTPQEGVVNFAQLLAMVAQIH 271 Query: 230 -GIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 + R +P D V+ + I Y+ +P+Q S R+LKLM R L + Sbjct: 272 PDLRIRFSTSHPKDITDQVLYTIKAYDNICKYIHLPVQSGSSRVLKLMNRTYDRAWYLQK 331 Query: 288 IKQWREICP-ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN- 345 I+ R I + + S I GF ETEED Q L ++ + + F YS G A Sbjct: 332 IEDIRRIVGEDCGISSDMIAGFCTETEEDHQDTLSLMEHIKYEFSYMFYYSERPGTLAAR 391 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMAD 402 D VP VK+ R + Q+Q S E+ + +G+ V+++ ++ GR+ A+ Sbjct: 392 KYADDVPLAVKKRRLQEIIDKQRQHSFEKNLKDIGKVYQVLVEGPSKKSDIEWQGRNSAN 451 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + + K G + V + + L G Sbjct: 452 ------KVVVFPNVDCKKGTYVDVLITNCTTGTLLGEI 483 >UniRef50_B5W2N4 RNA modification enzyme, MiaB family n=5 Tax=Cyanobacteria RepID=B5W2N4_SPIMA Length = 436 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 110/438 (25%), Positives = 193/438 (44%), Gaps = 23/438 (5%) Query: 19 KNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL-----NE 73 N DSER+ L G V + AD+V+ NTC D+A Q+ +G N Sbjct: 1 MNKADSERMAGILDEMGLTFVEDPNQADIVLYNTCTIRDNAEQKVYSYLGRQAKRKQENP 60 Query: 74 NGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH---NPFLSLV 129 N +IV GC+ +E + + P++ + GP ++ + + + P + Sbjct: 61 NLTLIVAGCVAQQEGEALLRRVPELDLVMGPQHANRLQDLLEQVFEGSQVVATEPINIVE 120 Query: 130 PEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEI 189 + A++ + GCN RCT+C++P++RG SR + +E + L AG KE+ Sbjct: 121 DITKPRRDSNITAWVNVIYGCNERCTYCVVPNVRGTEQSRTPEAIRAEMEELARAGYKEV 180 Query: 190 LVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV--YPYPHVDDV 247 ++ Q+ AYG D+ T + ++ L + + R+ + +P + + Sbjct: 181 TLLGQNIDAYGRDLPGSTPDGRHQH---TLTDLLYYVHDIPGIERIRFATSHPRYFTERL 237 Query: 248 IPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 I AE K+ + IP Q +LK M R + ++ I RE P+ ++ + IV Sbjct: 238 IRACAELPKVCEHFHIPFQSGDNDVLKAMARGYTHEKYRRIINTIREYIPDASISADAIV 297 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 GFPGETE F+ L + + D + YSP G A +Q+ EEVK +R R +L Sbjct: 298 GFPGETEAQFENTLKLVDDIGFDLLNTAAYSPRPGTGAALWENQLSEEVKADRLQRLNRL 357 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYLNGETNVKPGDI 423 + ER Q R V+++ + + +GR+ + + G G++ Sbjct: 358 VNVKAMERSQRYRDRIEEVLVEGTNPKDPSQVMGRTRGNR-----LTFFKGNLAELSGEL 412 Query: 424 LRVKVEHADEYDLWGSRV 441 ++VK+ + L G + Sbjct: 413 VKVKIIEVRAFSLTGEPI 430 >UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO n=52 Tax=Bacteroidetes/Chlorobi group RepID=RIMO_GRAFK Length = 450 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 170/449 (37%), Positives = 260/449 (57%), Gaps = 29/449 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 +K + +I V+LGC KN+ DSE ++ +L+ DVV +D ++V++NTCGFID+A + Sbjct: 3 TKSLKKNRINVVTLGCSKNVYDSEILMGQLKANDKDVVH-EEDGNIVVINTCGFIDNAKE 61 Query: 62 ESLEAIGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 +S+ I E + + KV VTGCL + +++ P V + G +L + Sbjct: 62 QSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLSALEA 121 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + TP++YAYLKI+EGC+ C+FC IP MRG S PI ++ Sbjct: 122 DYKHELIGE--------RLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENLV 173 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 +EA++L GVKE+++I+QD + YG+D+ K ++ L E L K+ W Sbjct: 174 TEAEKLAANGVKELILIAQDLTYYGLDLYK----------KRNLAELLENLVKVEGIEWI 223 Query: 234 RLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RLHY +P DV+ +M E K+ YLDIPLQH S +LK M+R + ++ +K++R Sbjct: 224 RLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFR 283 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + PE+ +R+T IVG+PGETEE +Q L +++KE R +R+GCF YS E A L D VP Sbjct: 284 KTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDVP 343 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 +EVK+ER N M++Q QIS E Q+K+G V+ID + IGR+ D+P++D V + Sbjct: 344 QEVKQERANEIMEIQSQISWELNQQKIGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVLI 403 Query: 413 NGET-NVKPGDILRVKVEHADEYDLWGSR 440 + T +K GD VK+ A ++DL+G Sbjct: 404 DATTVYLKTGDYYDVKIAEAADFDLYGEP 432 >UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bacteroidales RepID=D1PVJ2_9BACT Length = 443 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 165/451 (36%), Positives = 245/451 (54%), Gaps = 27/451 (5%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYD--DADMVIVNTCGFIDSAVQES 63 + +I FV++GC KNLVD+E ++ + GY V ++ +VNTCGFID+A +ES Sbjct: 2 KKNQIDFVTMGCSKNLVDTEHLMRQFENLGYRCVHDPQRVQGEIAVVNTCGFIDAAKEES 61 Query: 64 LEAIGEALNEN-----GKVIVTGCLGAKEDQIREV-HPKVLEITGPHSYEQVLEHVHHYV 117 + I E ++ V GCL + E P+V G +++Q+L+ + Sbjct: 62 INTILEFAEAKNEGRLKRLYVMGCLSQRYQDELEKTIPEVDRFYGKFNFKQLLQDLGPSE 121 Query: 118 PKPKHNPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + ++ TPRHYAY+KI+EGC+ C +C IP M G SR + + Sbjct: 122 DPKDSDALFTQRRKELSAGRKLTTPRHYAYIKIAEGCDRHCAYCAIPLMTGRHTSRSMED 181 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 +L E K+LV GVKE +I Q+ + YGVD+ K + L +++ + Sbjct: 182 ILEEVKQLVAEGVKEFQIIEQELTYYGVDIDG----------KPRIAELISRMADIPGVK 231 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W RLHY YP +++ +M E + YLDI LQH S +L M R S L I++ Sbjct: 232 WIRLHYAYPNQFPLELLDVMREKPNVCKYLDIALQHISDHVLSRMLRHVSKAETLELIRK 291 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPD 349 R+ P +TLR+T +VGFPGETEEDFQ LLDF++E R +R+G F YS EG + D Sbjct: 292 IRQEVPGITLRTTLMVGFPGETEEDFQELLDFVREVRFERMGAFVYSEEEGTYSALHYED 351 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGA 409 VP EVK+ R + M +QQ ISAE K+G+ VIID + +GR+ A +PE+D Sbjct: 352 DVPAEVKQRRLDELMAVQQDISAEIQAAKIGKTFKVIIDRKEGNYYVGRTEASSPEVDPE 411 Query: 410 VYLN-GETNVKPGDILRVKVEHADEYDLWGS 439 V + G+ N++ G VK+ +DE+DL+G Sbjct: 412 VLIPVGKRNLRTGCFYEVKITDSDEFDLYGE 442 >UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=10 Tax=Chlorobiaceae RepID=MIAB_CHLCH Length = 449 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 114/461 (24%), Positives = 194/461 (42%), Gaps = 39/461 (8%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M+ P + GC N DS + L+ EGY + DA +V++NTC + A Sbjct: 1 MTNANPDA-FYIHTFGCQMNQADSGIMTAILQNEGYVAASNEADAGIVLLNTCAVREHAT 59 Query: 61 QESLEAIGEALNENGK------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHV 113 + + + V VTGC+ E + + + +P V + GP +Y + + Sbjct: 60 ERVGHLLQHLHGRKKRSKGRLLVGVTGCIPQYEREVLFKNYPVVDFLAGPDTYRSLPLLI 119 Query: 114 HHYVPKPKHNPFL-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 K + A++ + GCN+ C +C++P RG Sbjct: 120 KQVQQAGKGATEAALAFNSAETYDGIEPVRSSSMSAFVPVMRGCNNHCAYCVVPLTRGRE 179 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 S P VL+E ++L +AG +EI ++ Q+ ++Y + + L + Sbjct: 180 RSHPKAAVLNEVRQLAEAGYREITLLGQNVNSY-----------YDPLAQCNFAELLAAV 228 Query: 227 SKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 S R +P + ++ +AE I ++ +P+Q S RIL+LM+R +++ Sbjct: 229 SCAAPATRIRFTTSHPKDISEALVRTIAEHSNICNHIHLPVQSGSSRILRLMQRGHTIEE 288 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 L +I R + P +TL + I GF GETE D Q L L+E + D F YSP Sbjct: 289 YLEKIALIRSLIPNVTLSTDMIAGFCGETEADHQATLRLLEEVQFDSAFMFYYSPRPRTP 348 Query: 344 AN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID---EVDEEGAIGRS 399 A L D VPE +K+ R ++ Q +ISA + VG + V+ + E +GR+ Sbjct: 349 AAEKLTDDVPEALKKARLQEIIECQNRISASLFSQAVGSVVEVLAEAESRRSSEQLMGRT 408 Query: 400 MADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + + GD+L V++ + L G Sbjct: 409 AGNRT------VVFARNGYQAGDVLHVRITGSTSATLLGEP 443 >UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DI62_9BACT Length = 469 Score = 429 bits (1104), Expect = e-119, Method: Composition-based stats. Identities = 164/473 (34%), Positives = 251/473 (53%), Gaps = 50/473 (10%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 KI SLGC KNLVD+E +L + G + +DAD+ +VNTC FI+ A QES AI Sbjct: 6 KICVSSLGCAKNLVDTEVMLGSMAKSGVVITGDLNDADIFVVNTCSFIEGARQESNAAIM 65 Query: 69 EA-----LNENGKVIVTGCLGAKEDQI-REVHPKVLEITGPHSYEQVLEHVHHYV----- 117 +A ++ KV+V GCL + + ++ HP V G + V++ + Sbjct: 66 DAITWKKKRKSRKVVVAGCLPQRSPEETKKNHPDVDLFLGLDDVASIGTMVNNLLRKMPT 125 Query: 118 ----PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 K +L + +TP HYAY+KISEGCNH+C+FC IP+ RG L SR I Sbjct: 126 MNTIQKDDLPVYLYDENTPRLLVTPSHYAYIKISEGCNHKCSFCAIPTFRGKLRSRTIES 185 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--- 230 ++ EA+ L++ GV+EI+++SQD++ YG D+K + L + L KL Sbjct: 186 IVKEAQALLNRGVREIILVSQDSTGYGSDLKDGSST----------AELLKALDKLDCDE 235 Query: 231 IWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W RL Y+YP D++I A+ K I Y+D+PLQH + ++LK M+R + R + Sbjct: 236 YWVRLLYLYPTTVTDELIETFAQSKHIAKYIDMPLQHGADKVLKTMRRGITRKRTEILLD 295 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 ++R+ P + +R+T +VG PGE EE+FQ LDF+KE + DR+G F YS E A +L D Sbjct: 296 KFRKAMPGVVMRTTLLVGHPGEGEEEFQECLDFVKEQQFDRLGVFTYSHEENTHARSLED 355 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVII---------------------D 388 E R ++ M +QQ+IS E+ Q G+++ VI+ + Sbjct: 356 FTDPETSAARRDQIMAVQQEISYEKNQRFAGQDLRVIVDEAFLKTDIDPNDERFDEAIME 415 Query: 389 EVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 E + + R+ DAP++D V+ + + + L V +E A +YDL+G V Sbjct: 416 EAGDYYVLSRTEGDAPDVDNLVHFSADEAILDQQFLTVHIEEATDYDLYGQLV 468 >UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RIMO_THEYD Length = 425 Score = 429 bits (1104), Expect = e-119, Method: Composition-based stats. Identities = 168/439 (38%), Positives = 250/439 (56%), Gaps = 18/439 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++LGCPKN VDS ++ L EG+ V + AD V +NTC FI+ A +ES++ Sbjct: 1 MKNFTVITLGCPKNTVDSRHLIDALTKEGFYYVEEFKKADFVFINTCCFINDAKEESIDE 60 Query: 67 IGEALNEN--GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 I A K+IV GCL + ++ + P++ + G +++++++ + Sbjct: 61 ILTAAKFKIDRKLIVFGCLSKRYGKELEKEIPEIDAVFGVDEKDKIIDYIKQFSKNSNFI 120 Query: 124 PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 + P Y Y+KI+EGC+ RC+FCIIP +RG S E+L E + V Sbjct: 121 -----SQNFQYTVEPPSYRYIKIAEGCSRRCSFCIIPDVRGPFRSLNPEEILKEVENFVH 175 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 +G+KE ++++QD + YG D+K T +K + LC K W RL Y+YP Sbjct: 176 SGIKEFILVAQDITQYGKDLKGYT-------LKRLLKDLCS--IKGDFWIRLLYLYPSDI 226 Query: 244 VDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +++I +A E KI+ YLDIP+QH+ RIL+LM R G+ L +IKQ R+ PE+TLRS Sbjct: 227 DENLIETIADEEKIVKYLDIPMQHSEERILRLMGRRGTKKEYLKKIKQIRQAIPEVTLRS 286 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 TFIVGFP ETEE+FQ L+DF++E + DR+G FKYS EG A +L Q+PE VK R+N Sbjct: 287 TFIVGFPTETEEEFQRLVDFIEEVQFDRLGVFKYSKEEGTKAYSLKGQIPENVKNRRYNE 346 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 M Q IS E+ + +G++ +ID +D + AI R APEIDG V L ++K G+ Sbjct: 347 IMARQAVISLEKNRALIGKKYEALIDYIDADIAIARLYCHAPEIDGVVILENTADLKAGE 406 Query: 423 ILRVKVEHADEYDLWGSRV 441 + + + EYD+ G V Sbjct: 407 KVTILITEGYEYDVKGVIV 425 >UniRef50_C7MNF9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=2 Tax=Coriobacteriaceae RepID=C7MNF9_CRYCD Length = 448 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 122/453 (26%), Positives = 205/453 (45%), Gaps = 33/453 (7%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + GC N DSERI L + G V S +AD I TC + A + + + Sbjct: 6 TFSITTFGCQMNKHDSERIAGLLESLGSIAVSSPAEADFSIFMTCCVREKADERLMGQVA 65 Query: 69 EALNENGK---------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVP 118 N+ + V + GC+G ++ + + V + G H+ E + + + + Sbjct: 66 TMKNDAPRKGSPFGRRFVAIGGCIGQRDGEKLLTQLDNVDVVFGTHNMETLPQLLESAIE 125 Query: 119 KPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 K + + P A+L I+ GCN+ CTFCI+P +RG +SRP+ E Sbjct: 126 KGSRRAEIIDGRAEFHDELPEDREHPWAAWLPITVGCNNFCTFCIVPYVRGREISRPLDE 185 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-W 232 + +A+ V GVKEI ++ Q+ ++YG D+ ++ + ++ GI Sbjct: 186 IADQARAYVQQGVKEITLLGQNVNSYGRDLYGSP----------RFDAVLDAVAASGIER 235 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R +P D VI A ++P L +P Q S RIL M R +++ I++ Sbjct: 236 IRFATSHPKDLTDGVIERFATLPNLMPALHLPAQSGSNRILAAMNRRYTIEHYEGLIEKL 295 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R + P + L + IVGFPGETE+DF+ + +K ++V F YS +G A LPD Sbjct: 296 RVVRPYIALSTDIIVGFPGETEDDFEQTCELVKRVGYNQVFTFIYSRRDGTPAARLPDDT 355 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVY 411 P V +ER++R + + ++ + R + + R + V+I+ + + A MA + V+ Sbjct: 356 PRSVIQERFDRLVSIVREGALARNRLSLDRTMPVLIEGISKRNAS--MMAGKSPYNQTVH 413 Query: 412 LNGETNVKP----GDILRVKVEHADEYDLWGSR 440 L G I+ +E A + L GS Sbjct: 414 LPLPAGTSLQQWEGTIVTAHIEEARTWYLRGSM 446 >UniRef50_Q8EUX4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Bacteria RepID=MIAB_MYCPE Length = 491 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 108/449 (24%), Positives = 203/449 (45%), Gaps = 27/449 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC NL D+E ++ L GY+ + +D+V++NTC + A + I Sbjct: 54 KTYHIKTFGCQSNLRDTEVMMGMLELIGYEYNEDVNTSDLVLLNTCAVREHAESKVFADI 113 Query: 68 G-----EALNENGKVIVTGCLGAKE---DQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 G + N N V GC+ +E ++I + + V I G H+ ++L + + + Sbjct: 114 GILDRIKKSNPNFIFGVCGCMAQEEAVVNRILKSNFNVDFIFGTHNVHRILNLLEQVIFE 173 Query: 120 PKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + ++ P ++ + GC+ CT+CI+P RG + SR ++ Sbjct: 174 KNLVVEVWSHEGNVIENLPSKRTNNLKGFVNVMYGCDKFCTYCIVPMTRGKIRSRRKEDI 233 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WT 233 L E +++ G KE+ +I Q+ ++YG+D + + +L E ++K GI Sbjct: 234 LDEVHQMISEGYKEVTLIGQNVNSYGIDFDNGENY--------LFNNLLEDVAKTGIERV 285 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 R P+ ++ M + I+P++ +P+Q ILK M RP + + + R Sbjct: 286 RFTTSNPWNFTRSIVDTMKKYPNIMPHIHLPIQSGDETILKKMNRPMKIGDYIDLVDYIR 345 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 P ++ + IVGFP ET+E F L+ K D F YS +G A +PD++P Sbjct: 346 ANIPNCSITTDLIVGFPNETKEQFNKTLELYKRIEFDNAFTFIYSKRDGTVAAIIPDEIP 405 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 K+ER ++ + S + ++ V + + V++D ++ S +P+ + Sbjct: 406 LSEKKERLQELNEMVKTFSKKNNEKYVNKVLDVLVDGPSKKDKTVIS-GYSPQWK---VV 461 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSRV 441 N + K G+I++V + A + L G + Sbjct: 462 NFTGSAKSGEIVKVLITSASRFTLNGKMI 490 >UniRef50_D2QJ28 RNA modification enzyme, MiaB family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ28_9SPHI Length = 513 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 116/481 (24%), Positives = 195/481 (40%), Gaps = 52/481 (10%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + ++ S GC N DSE + +R GY S D+AD++ +NTC D+A Q+ Sbjct: 37 KKRLYIESYGCQMNFADSEIVAAVMRNAGYATTSSADEADVIFLNTCAIRDNAEQKVRHR 96 Query: 67 IG-----EALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + V + GC+ + ++ E V + GP +Y + + V Sbjct: 97 LKHLTGLKRQKPELLVGMLGCMAERLKTKLLEEEKVVDIVAGPDAYRDIPKLVEEAESGQ 156 Query: 121 KHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 K E ++P A++ I GC++ C+FC++P RG SR + Sbjct: 157 KAVNVFLSREETYADISPIRLNSNGVTAFVSIMRGCDNMCSFCVVPFTRGRERSRDPFSI 216 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS---------------- 218 + EA+ L D G +E+ ++ Q+ +Y ++ R+ Sbjct: 217 VREAQDLFDQGYREVTLLGQNVDSYKWELGVRSEELGVADRTGRPASANMDASATPNSSL 276 Query: 219 ----------MVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAEG-KILPYLDIPLQ 265 L E ++++ + R +P DDV+ MA I Y+ +P Q Sbjct: 277 LTTNTNTTTTFAHLLEMVAQIHPDLRVRFSTSHPKDITDDVLHTMARYDNICNYIHLPAQ 336 Query: 266 HASPRILKLMKRPGSVDRQLARIKQWREICP-ELTLRSTFIVGFPGETEEDFQMLLDFLK 324 + R+LKLM R + +I + REI + + + I GF ETEE+ Q L + Sbjct: 337 SGNSRVLKLMNRTYDRPWYIGKIDRIREILGEDCGISTDMISGFCTETEEEHQDSLSLMD 396 Query: 325 EARLDRVGCFKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREI 383 D F YS G A D +PE+VK+ R N + Q SAER Q +G+ Sbjct: 397 YVHYDYAYMFAYSERPGTLAAKKYADDIPEDVKKRRLNEIIARQLAHSAERNQRHIGQVQ 456 Query: 384 LVIIDEVDE---EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V+I+ + + GR+ + + V + + + G + V V L G Sbjct: 457 RVLIEGPSKRSDDFLCGRN-----DQNKMVVFP-KGDHQKGQYVNVLVTECTSATLRGEV 510 Query: 441 V 441 V Sbjct: 511 V 511 >UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=40 Tax=cellular organisms RepID=MIAB_SYNS9 Length = 472 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 119/452 (26%), Positives = 202/452 (44%), Gaps = 19/452 (4%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 + + GC N DSER+ L + GY + DAD+V+ NTC D+A Q+ Sbjct: 18 DQNRRSYWITTFGCQMNKADSERMAGILESMGYCEATAELDADLVLYNTCTIRDNAEQKV 77 Query: 64 LEAIGEAL-----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYV 117 +G N N ++V GC+ +E + + P++ + GP ++ + Sbjct: 78 YSYLGRQAQRKRDNPNLTLVVAGCVAQQEGESLLRRVPELDLVMGPQHANRLETLLQQVD 137 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYA---YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + + + R A ++ + GCN RCT+C++PS+RG SR + Sbjct: 138 SGQQVVATEEHHILEDITTARRDSAICGWVNVIYGCNERCTYCVVPSVRGQEQSRRPEAI 197 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 E + L G KEI ++ Q+ AYG D+ T E ++ L + + R Sbjct: 198 RLEMEGLAAQGFKEITLLGQNIDAYGRDLPGITAEGRREH---TLTDLLHHVHDVEGIER 254 Query: 235 LHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 L + +P + +I A+ K+ + IP Q +LK M R +V+R I + Sbjct: 255 LRFATSHPRYFTERLIDACADLSKVCEHFHIPFQSGDNALLKSMARGYTVERYRRIIDRI 314 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R+ P+ ++ + IVGFPGET+ ++ LD + E D+V YSP A +Q+ Sbjct: 315 RDRMPDASISADVIVGFPGETDAQYRRTLDLIDEIAFDQVNTAAYSPRPNTPAATWDNQL 374 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDG 408 PE VK ER L ++ + ER GR V+ + + D E +GR+ + Sbjct: 375 PESVKVERLKEINALVERNARERNIRYQGRTEEVLAEGINPKDPEQLMGRTRTNRLTFFS 434 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 A +G +PGD++ V+++ + L G+ Sbjct: 435 ATSPDGHL-YQPGDLVNVRIDAVRSFSLSGTP 465 >UniRef50_Q7UK39 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Planctomycetaceae RepID=RIMO_RHOBA Length = 477 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 178/459 (38%), Positives = 261/459 (56%), Gaps = 32/459 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 P+ + VSLGCPKNLVD+E++L L +GY +V S D AD V+VNTCGFIDSA Sbjct: 26 ETGKPRGRYAVVSLGCPKNLVDTEQMLGRLDADGYRMVDSVDGADFVVVNTCGFIDSARD 85 Query: 62 ESLEAIGEAL--NENGK---VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES+ AI E L +GK V+VTGCL ++ D++ + P + + G ++ V Sbjct: 86 ESMAAIDEMLALKRDGKLRNVVVTGCLAERQQDKLLQARPDIDALVGVFGRNDIVSVVDE 145 Query: 116 YVPK-------PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 K L +TPRH+AYLKISEGC+ CTFC IP MRG S Sbjct: 146 LYSGLQEQRTIFKPAAVNPLSDAMRSAVTPRHFAYLKISEGCDRLCTFCAIPKMRGKHFS 205 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 +PI +++ EAKRL D+GV+E+++++QDT+ YG+D + + L ++L K Sbjct: 206 KPIEQIIDEAKRLGDSGVREVVIVAQDTTYYGMDRYG----------EPRLNQLLKELDK 255 Query: 229 LGI--WTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQL 285 + W RL Y YP D +I +A + I+PY+D+PLQHAS ++LK M R + Q Sbjct: 256 IESIDWIRLMYFYPMYIDDALIDTLASARRIVPYIDMPLQHASDKMLKRMARKTTRSLQT 315 Query: 286 ARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN 345 +++ R L +R+T I GFPGETEEDF L+DF++E+R + +G F YS E A Sbjct: 316 DIVQKLRSRIDSLVMRTTMITGFPGETEEDFVELMDFVQESRFENLGVFTYSIEEDTPAA 375 Query: 346 ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMAD 402 LP++V EV R + M+LQQQI+ + +VG V+ID E IGR+ ++ Sbjct: 376 RLPNRVDPEVAARRRDDLMELQQQIAFDWNDSRVGGTEEVLIDAEMPEQDNVFIGRTRSE 435 Query: 403 APEIDGAVY---LNGETNVKPGDILRVKVEHADEYDLWG 438 AP++DG +Y ++ ++ V+ G I ++ + YDL Sbjct: 436 APDVDGLIYVSQVDPDSPVEVGQIRPCEIVASQGYDLVA 474 >UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R676_9PLAN Length = 475 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 124/475 (26%), Positives = 212/475 (44%), Gaps = 55/475 (11%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 ++ ++GC N++DSE ++ LR GY++ AD+++ NTC + A ++ A Sbjct: 1 MKRLYIETVGCQMNVLDSEMVVASLRKRGYELERDEASADVLLFNTCSVREQAENKTYSA 60 Query: 67 IGEAL-----NENGKVIVTGCLGAKEDQI-REVHPKVLEITGPHSYEQVLEHVHHYVPK- 119 +G N + + V GC+ K+ Q+ + P V + GP ++ + + Sbjct: 61 LGRLRSLKKANPDKIIGVMGCMAQKDQQLVFDRAPYVDLVVGPGQLSRIPDLIDQVAAGH 120 Query: 120 ----------------PKHNPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSM 162 + P + + P + AYL+I GC+ CT+CI+PS Sbjct: 121 GKQMAVSLGRKDAANEEVRRSHETFDPLRDPTMRPTPFQAYLRIQIGCDKFCTYCIVPST 180 Query: 163 RGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSL 222 RG RP ++ EA+ L D G KEI +I Q ++Y T T + L Sbjct: 181 RGPEQGRPPQQIYDEARILADQGCKEITLIGQTVNSYRYKSGEST---------TRLSDL 231 Query: 223 CEQLSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPG 279 LS++ RL +V YP +D++ + + K+ PYL +P Q S +L MKR Sbjct: 232 LVNLSEIDGIKRLKFVTNYPKDMTNDLLAAVRDLPKVSPYLHVPAQSGSNTVLTRMKRGY 291 Query: 280 SVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPV 339 SV+ + + E+ P+ + S FIVGF GETE DF+ + + R FKYS Sbjct: 292 SVEDYREMMARIYEMVPDAAVTSDFIVGFCGETEADFEATKQLVSDCRFKNSFIFKYSER 351 Query: 340 EGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE----- 393 G L D +P +VK R N ++LQ +IS + Q+ +G+ + V+++ Sbjct: 352 PGTKGAELLADDIPFDVKHRRNNELLELQNRISEQENQKFLGQRVEVLVEGPSSRAVSRG 411 Query: 394 -------GAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 GR+ D V +G + G+++++ + + L+G+ V Sbjct: 412 EVEGDLVQLTGRTPC-----DRIVVFDGNRRLT-GELVQLAIYECAPHTLFGAIV 460 >UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLB8_FIBSS Length = 440 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 122/455 (26%), Positives = 212/455 (46%), Gaps = 35/455 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K + GC N DS I EL G + +DAD++IVNTC + A + ++ Sbjct: 1 MKKYHLATYGCQMNEYDSAMIAQELDMCGCVETNNQEDADIIIVNTCSVREKAEETAIVN 60 Query: 67 I-----GEALNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I N + KV+V GC+ + ++ + V I GP Y ++ E + P Sbjct: 61 ISKLKYLRKKNPDVKVVVCGCMAKNRGPELLKRLKNVNYIVGPDQYRKIPELLFGDAQSP 120 Query: 121 KHNP----FLSLVPEQGV-----KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 H F+ ++ KL A++ I GCN RC++CI+P +RG R + Sbjct: 121 LHKTHHKMFIDEDRDENYLGEYAKLQNDVSAFVAIQRGCNKRCSYCIVPYLRGPEKYRDM 180 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +VL+E KR D G+ E++++ Q +AY + +L ++S++G Sbjct: 181 DDVLTEVKRAADKGITEVMLLGQTVNAY-------------KTPNADFTTLLTKVSEIGG 227 Query: 232 WTRLHYVYPYP--HVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R+ + P+P + +++I L+ K+ Y IPLQ S ILK M+R ++++ + I Sbjct: 228 IKRIRFTSPHPRHYTNELIDVLLNNPKVCHYAHIPLQSGSDAILKKMRRQHNMEQYMTVI 287 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 +Q R P + + I GF GET+EDF+ + + + D F YSP +G ++ Sbjct: 288 EQLRSKDPYYAISTDVICGFVGETDEDFEQTIKAFEACQFDTAYMFIYSPRKGTESFNEA 347 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDG 408 + + E K R +R ++LQ I+ +R Q +GR ++++ + + Sbjct: 348 EILTPEEKSARHSRLVELQNAITLKRNQMMIGRTEEILVEHGSTRDKT--ELVGKTDNFK 405 Query: 409 AVYLNGETN--VKPGDILRVKVEHADEYDLWGSRV 441 V E +KPGD ++VK++ + L G+ V Sbjct: 406 KVIFKPEEGRIIKPGDYVKVKIDDIRGWTLRGTLV 440 >UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransferase n=3 Tax=Planctomycetaceae RepID=A6CGG9_9PLAN Length = 510 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 128/477 (26%), Positives = 218/477 (45%), Gaps = 59/477 (12%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ ++GC N++DSE ++ +LR GY++ + +A+ ++ NTC + A + ++G Sbjct: 33 KLYIETVGCQMNMLDSELVVADLRKRGYELTQNVKEAETILFNTCSVREHAEHKIYSSLG 92 Query: 69 EA-----LNENGKVIVTGCLGAKEDQIR-EVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 N + V GC+ K+ ++ + P+V + G QV + Sbjct: 93 RLRYGARKNPKKVIGVMGCMAQKDQKLIFQKAPQVDFVVGTGQLAQVASLIDKARVNHSQ 152 Query: 123 NP----------------------FLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCII 159 N F S P + ++ P Y A+++I GC+ C++C++ Sbjct: 153 NVRSRELAVGLGRKDGKLAEITNSFQSYDPLRDPEMRPSPYQAFVRIMIGCDKFCSYCVV 212 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 PS RG SR E+LSE K L D GVKE+ ++ Q ++Y H + + Sbjct: 213 PSTRGPEQSRSPREILSEVKVLADQGVKEVTLLGQTVNSY---------KHTQDGKLFRL 263 Query: 220 VSLCEQLSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMK 276 L + + +R+ +V YP D++ + + K YL +PLQH +LK+MK Sbjct: 264 SDLLYLIHDVEGISRIKFVTSYPKDMTTDLLEAIRDLPKATRYLHVPLQHGCNDVLKVMK 323 Query: 277 RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKY 336 R +V+ +++ EI P ++ S FIVG PGETEE Q+ L+ ++E R FKY Sbjct: 324 RGYTVEDYREMMQRVNEILPGCSVSSDFIVGHPGETEESHQLSLESIREFRFKNSFIFKY 383 Query: 337 SPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--- 392 S G A D++P+ VK+ R N + +Q QIS E E +G+++ V+++ + Sbjct: 384 SERPGTKAAERFKDEIPDAVKKRRNNEMLAVQNQISEEDNAEFIGKQVEVLVEGPSKSAQ 443 Query: 393 --------EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 E +GRS D V +G + G + V++ L G V Sbjct: 444 KAIEESLAEQLVGRSNC-----DRIVVFDGNPRL-AGSLATVEIFDVTPTTLIGGIV 494 >UniRef50_A4WRD4 Ribosomal protein S12 methylthiotransferase rimO n=268 Tax=Bacteria RepID=RIMO_RHOS5 Length = 457 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 277/436 (63%), Positives = 323/436 (74%), Gaps = 10/436 (2%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 QP IG VSLGCPK LVDSERILT LR EGY + P Y AD VIVNTCGF+DSA ESLEA Sbjct: 29 QPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDYAGADAVIVNTCGFLDSAKAESLEA 88 Query: 67 IGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 IGEAL ENG+VIVTGCLGA+ D I HPKVL +TGPH YEQVL+ VH VP P +PF+ Sbjct: 89 IGEALRENGRVIVTGCLGAEPDYITGAHPKVLAVTGPHQYEQVLDAVHGAVP-PAPDPFV 147 Query: 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186 L+P GV+LTPRH++YLKISEGCNH C FCIIP MRG LVSRP VL EA++LV+AGV Sbjct: 148 DLLPATGVRLTPRHFSYLKISEGCNHSCRFCIIPDMRGRLVSRPERAVLREAEKLVEAGV 207 Query: 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246 +E+LVISQDTSAYG D K F L +L +LG W RLHYVYPYPHV + Sbjct: 208 RELLVISQDTSAYGTDWKGPVRFPILP--------LARELGQLGAWVRLHYVYPYPHVRE 259 Query: 247 VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 +IPLMAEG ILPYLDIP QHA P +LK M RP + R L I WR CP++TLRSTFIV Sbjct: 260 LIPLMAEGLILPYLDIPFQHAHPEVLKRMARPAAAARTLDEIAAWRRDCPDITLRSTFIV 319 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 G+PGETEE+FQ LLD+L EA+LDRVGCF+Y V GA +NALPD V E+K+ERW RFMQ Sbjct: 320 GYPGETEEEFQTLLDWLDEAQLDRVGCFQYENVAGARSNALPDHVAPELKQERWERFMQK 379 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL-NGETNVKPGDILR 425 Q IS +L ++G+ + VI+DEVD EGA R+ ADAPEIDG +++ G + PGD+L Sbjct: 380 AQAISEAKLAARIGQRLEVIVDEVDGEGATCRTKADAPEIDGNLFIDEGFEALSPGDLLT 439 Query: 426 VKVEHADEYDLWGSRV 441 V+VE A EYDLWG V Sbjct: 440 VEVEEAGEYDLWGRAV 455 >UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYG6_9DELT Length = 486 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 114/463 (24%), Positives = 197/463 (42%), Gaps = 49/463 (10%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P++ + GC N D+ +L LR +G+ V S +AD+V+VNTC + A Sbjct: 36 PRVYMETFGCQMNEADTALVLGRLRQDGWVRVTSPAEADLVLVNTCAVREKAEDRVYGRT 95 Query: 68 -----GEALNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 N + + +TGC+ D++ P + + GP SY + + + Sbjct: 96 TQLLDHRNRNPDLVIGITGCMAEHLRDKLETRAPHIQLVAGPDSYRNIAALARKAITGER 155 Query: 122 HNPFLSLVPEQGVKLTPRHY------------------AYLKISEGCNHRCTFCIIPSMR 163 E L P Y+ I GC+ CTFC++P R Sbjct: 156 AVDVHLDKAEVYEGLDPVIRSPGDDGSEAATSRDDGVSGYVTIQRGCDKFCTFCVVPFTR 215 Query: 164 GDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLC 223 G P EVL +A+RL +AG +E+ ++ Q ++Y S L Sbjct: 216 GRERGVPPREVLRQARRLAEAGYRELTLLGQTVNSY-------------AWEDVSFAELL 262 Query: 224 EQLSKLGIWTRLHYV--YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGS 280 ++ + R+ + YP D++I ++A E K+ PY+ +P+Q + +L+ M+R + Sbjct: 263 RAVAAVEGIERIRFTSPYPVDFSDELIEVLATEPKVCPYVHMPVQAGADVVLERMRRGYT 322 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 + +++ R P + + + +VGF GETE D L ++E + D F YS E Sbjct: 323 LADYRELVRKLRAAVPHIAISTDIMVGFCGETEADHAETLALMEEVQFDFAFMFAYSDRE 382 Query: 341 GADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIG 397 A+ L D VP+E K R ++LQ++ + RL +VG+ V++ + G +G Sbjct: 383 ITYASKKLVDDVPQETKLRRLREVIELQEKHTRARLAARVGQRDRVLVVNTSKRGDKLLG 442 Query: 398 RSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 R+ V L PG+ + V + + L+G Sbjct: 443 RTPT-----FQKVLLP-LGCAAPGEFVDVTITGTTGHSLFGEL 479 >UniRef50_D1H8D6 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H8D6_VITVI Length = 663 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 113/476 (23%), Positives = 218/476 (45%), Gaps = 45/476 (9%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAV 60 S++ P+ +I + GC N+ D E +L+ ++ GY +VV + A+++ +NTC D+A Sbjct: 176 SEILPRGRIYHETYGCQMNINDMEIVLSIMKKAGYNEVVEVPESAEVIFINTCAIRDNAE 235 Query: 61 QESLEA----------------IGEALNENG-KVIVTGCLGAK-EDQIREVHPKVLEITG 102 Q+ + IG A + + KV+V GC+ + +D+I + V + G Sbjct: 236 QKVWQRLNYFWFLKRHWKSNVSIGRADSLHPPKVVVLGCMAERLKDKILDADKMVDVVCG 295 Query: 103 PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTF 156 P +Y + + K L + E ++P A++ I GCN+ C+F Sbjct: 296 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSIMRGCNNMCSF 355 Query: 157 CIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVK 216 CI+P RG SRP+ ++ E L GVKE++++ Q+ ++Y + + E Sbjct: 356 CIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSY-----NDASGFDKEVEP 410 Query: 217 TSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLM 275 + L E+ + + R +P D+++ LM + + + +P Q S +L+ M Sbjct: 411 GANWKLSEEFPE--MRFRYTSPHPKDFPDELLYLMRDRYNVCKSIHLPAQTGSSTVLERM 468 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 +R + + L +++ R I P++ + S FI GF GETEE++ + +K D F Sbjct: 469 RRGYTREAYLDLVQKIRRIVPDVGITSDFICGFCGETEEEYADTISLVKAVGYDMAYMFA 528 Query: 336 YSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE- 393 YS E A+ D VP+ +K+ R +++ ++ + + ++G LV+++ ++ Sbjct: 529 YSMREKTHAHRNYVDDVPDNIKQRRLAEMIEVFRESTGQCYDSQIGTVQLVLVEGPNKRA 588 Query: 394 ---GAIGRSMADAPEIDGAVYLN-------GETNVKPGDILRVKVEHADEYDLWGS 439 IG++ + G N + GD + V++ + L+G Sbjct: 589 PDTELIGKTDRGHRVSFKNTPVPHWDDDVGGNQNPRVGDFVEVRILTSTRASLFGE 644 >UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=23 Tax=Proteobacteria RepID=MIAB_SPHWW Length = 453 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 132/459 (28%), Positives = 207/459 (45%), Gaps = 33/459 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 MS+ P S GC N+ D R+ L +G S D AD+V++NTC + A Sbjct: 5 MSRPAP-KSFHVKSFGCQMNVYDGARMAELLEAQGMHAADSADAADLVVLNTCHIREKAA 63 Query: 61 QESLEAIGEALNE---------NGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVL 110 ++ IG + + + V GC+ E +I P V + GP +Y + Sbjct: 64 EKVYSDIGRIVKKAADAEEGRARPMIAVAGCVAQAEGPEIPRRAPAVDIVVGPQAYHNLP 123 Query: 111 EHVHHYVPKPK----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + V + P S + A+L + EGC+ CT+C++P RG Sbjct: 124 QLVADAAEGRRALDTDMPAASKFDTLPKRRRQGPTAFLTVQEGCDKFCTYCVVPYTRGAE 183 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAY-GVDVKHRTGFHNGEPVKTSMVSLCEQ 225 +SRP G ++ EAK LVDAG +EI ++ Q+ +A+ G D + RT +G L Sbjct: 184 ISRPWGAIVDEAKALVDAGAREITLLGQNVNAWTGEDDRGRTQGLDG---------LIRA 234 Query: 226 LSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVD 282 L L R+ Y +P D +I E K++P+L +P+Q S RILK M R Sbjct: 235 LDALPGLARIRYTTSHPNDMSDGLIAAHGEVAKLMPFLHLPVQAGSDRILKAMNRSHDAA 294 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 L I++ R P++ + FIVGFPGET+EDF+ L ++ + FKYSP G Sbjct: 295 GYLRLIERVRAARPDIAVSGDFIVGFPGETDEDFEATLAIVRAVDHAQAFSFKYSPRPGT 354 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD 402 A ++ QV V +ER R L + VG+ V+I+ ++ G+ + Sbjct: 355 PAASMDGQVAPAVMDERLQRLQALLNEQQHRFNLATVGKRCEVLIERDGKKP--GQRIGK 412 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 +P + + +G G ++ V + A L G+ V Sbjct: 413 SPWLQSVIVEDGPA---IGTLVTVDIVSAGPNSLSGALV 448 >UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Bacteroidetes RepID=MIAB_SALRD Length = 503 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 111/455 (24%), Positives = 214/455 (47%), Gaps = 35/455 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++ + GC N+ DS + + L GY + AD+V++NTC ++A ++ + Sbjct: 42 KQVYIETYGCQMNVNDSGIVASVLEESGYGLTRDQAAADVVLLNTCAIRENAERKIRARL 101 Query: 68 GEALNENGK------VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 +E K + V GC+ + +++ E V + GP +Y + + ++ Sbjct: 102 SMLRSEKEKRDGELMLGVLGCMAERLREKLLEQEDLVDVVVGPDAYRDLPQLLYEADATG 161 Query: 121 KHNPFLSLVPEQGVKLTPRHY-------AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + + L ++ + AY+ I GC++ CTFC++P RG SRP+ Sbjct: 162 QAAVNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFTRGREESRPVTT 221 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GI 231 +LSE RL + G KE+ ++ Q+ ++Y + + + S L +++S++ + Sbjct: 222 ILSEVARLAEEGYKEVTLLGQNVNSY--------HYTDADGTSVSFAELVDRVSRVSPEM 273 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 R +P DD++ + + + Y+ +P+QH + +L M+R + + LA ++ Sbjct: 274 RVRYSTSHPKDCTDDLLKVHRDRPNVCNYIHLPVQHGNTEVLDRMRRTYTREEYLALTER 333 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPD 349 +E+CP ++L + I GF GETE + L ++E R D FKYS A D Sbjct: 334 AKELCPGVSLSTDLIAGFCGETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAARKYED 393 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPEI 406 VPE+ K+ R ++LQ Q + E + +VGR V+++ ++ GR+ + Sbjct: 394 DVPEDTKQRRLEEIIELQNQHAKESNEAEVGRVHTVLVEGPSKKSDAQFFGRT-----DT 448 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + V + + + GD +RV++E L G+ + Sbjct: 449 NKGVVFD-REDYEKGDYVRVRIEDCTSSTLLGTAI 482 >UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=CK5P1_DROME Length = 583 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 114/476 (23%), Positives = 211/476 (44%), Gaps = 43/476 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F GC N D+E + + L+ GY ++AD++++ TC D A Q + Sbjct: 92 RKVHFEVYGCQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRL 151 Query: 68 GEALNENGK---------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEH--VHH 115 K + + GC+ + + + E V I GP SY+ + + Sbjct: 152 KHLRAMKNKRSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISR 211 Query: 116 YVPKPKHNPFLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LSL + A++ I GC++ CT+CI+P RG SRP Sbjct: 212 HYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRP 271 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYG-------------VDVKHRTGFHNGEPVKT 217 + +++E K L + GVKE+ ++ Q+ ++Y V + + + T Sbjct: 272 LASIVAEVKALAEQGVKEVTLLGQNVNSYRDRTAQEEQDSLKATPVPGFSTVYKPKTGGT 331 Query: 218 SMVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKL 274 +L +++ + R +P D+V+ ++ + L +P Q + ++L+ Sbjct: 332 PFAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLER 391 Query: 275 MKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF 334 M+R S + L ++ R+ P + L S FI GF GETEE+FQ + +++ + + F Sbjct: 392 MRRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLF 451 Query: 335 KYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE 393 YS E A+ D VP VK ER R +Q+ ++ + + ++ G+E L++I+ + Sbjct: 452 AYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQLILIEGKSKR 511 Query: 394 ---GAIGRSMADAPEIDGAVYLN------GETNVKPGDILRVKVEHADEYDLWGSR 440 GR+ A+ I ++Y+ + GD L V++E ++ L G+ Sbjct: 512 SDAHWFGRNDANIKVIVPSIYVPISGDSTARKSFGVGDFLAVRIEESNSQVLKGTP 567 >UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=C4Z0P5_EUBE2 Length = 446 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 119/439 (27%), Positives = 204/439 (46%), Gaps = 31/439 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD--ADMVIVNTCGFIDSAVQES 63 K+ SLGC N ++E + LR EGY++VP +D AD+ I+NTC + A ++S Sbjct: 4 KLKKVAIHSLGCKVNSYEAESMEIMLRDEGYEIVPFSEDVQADIYIINTCSVTNIADRKS 63 Query: 64 LEAIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + + +A N V+ GC + + V I G + ++E ++ Y Sbjct: 64 RQMLHKAKKMNPEAVVVAAGCYVQADPDGVKKDECVDIILGNNMKISIVEALNDYFGGAD 123 Query: 122 HNPFLSLVPEQGVKLTP--------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 +L + ++ + AY+KI +GCN C++CIIP +RG + SR + Sbjct: 124 KTSYLVDINDKYQEYESLKINQTGEHTRAYIKIQDGCNQFCSYCIIPYVRGRVRSRKPED 183 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 +++E K L GVKE+++ S+YG D+++ S++ L E + ++ Sbjct: 184 IVNEVKTLAATGVKEVVLTGIHISSYGTDLENI-----------SLIELIEAIHEIEGIK 232 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 RL + P ++ +A KI P+ + LQ + LK M R + + + Sbjct: 233 RIRLGSLEPRIITEEFAKRIAGLEKICPHFHLSLQSGCDKTLKAMNRKYNTEEYYEGCVK 292 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 RE+ + + IVGFPGETEEDF FL++ + FKYS +G A+ + +Q Sbjct: 293 LREVFENPAITTDVIVGFPGETEEDFLETRKFLEKVHFYEMHIFKYSRRKGTVADKMKEQ 352 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS-MADAPEIDGA 409 V + VK ER + L++ S E + +G+ + V+I+E+ E GRS + Sbjct: 353 VADTVKSERSAVLLALEKAQSLEYRKMYIGKRLEVLIEELTE--IDGRSYYTGYTKNYIR 410 Query: 410 VYLNGET--NVKPGDILRV 426 V + + + DI Sbjct: 411 VAIAADEFKDNPVNDIYEC 429 >UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D7J9_PARTE Length = 504 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 110/463 (23%), Positives = 200/463 (43%), Gaps = 28/463 (6%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 ++ PK + GC N DS+ + + L +EGY +AD++ +NTC +A Sbjct: 38 VNNTNNGPKFFIETYGCQMNANDSQIVQSILSSEGYSNTNDISEADIIFLNTCSIRANAE 97 Query: 61 QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 ++ + + E ++N + + GC+ + + I GP SY+ + ++ + Sbjct: 98 KKVFQRMSELKSQNKVLGILGCMAERLKEQL-FVQGANIIVGPDSYKSLPTLLNSFQLTR 156 Query: 121 KHNPFLSL------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 +L + T Y+ I GCN+ C+FC++P RG SR + Sbjct: 157 DKQIDTNLSLTETYDDILPINPTDSITTYVSIMRGCNNMCSFCVVPFTRGRERSRNPESI 216 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT-----------SMVSLC 223 L E + L G+KE+ ++ Q+ ++Y + + H T L Sbjct: 217 LEEIQILTQKGIKEVTLLGQNVNSYFFQDEKISSQHENTVGFTELYKLRSGNGLRFDQLL 276 Query: 224 EQLSKLGIWTRLHYVYPYP--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGS 280 ++++ TR+ + P+P V+ ++A I + IP+Q S ILK M+R + Sbjct: 277 DEIAVKFPKTRIRFTSPHPKNFPKKVLEVIAKHPNICKNIHIPIQSGSDEILKKMRRNYT 336 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 + + R + P +TL + IVGF ETE DF+ L L+ + + F YS E Sbjct: 337 RGAIVDLCNEARTLIPNVTLSTDVIVGFCDETEYDFEQTLSLLQLVQFENAFMFAYSMRE 396 Query: 341 GADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID--EVDEEGAIG 397 A L D VPE VK R + ++ Q +I + ++G++ +V+++ G Sbjct: 397 KTHAYRNLQDNVPESVKSSRLEKLIEQQHKIMNYKNSLEIGKKHIVLVEQLGNKPNQLKG 456 Query: 398 RSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 R+ ++ G V+ N GD + V++ + L G Sbjct: 457 RTDSNK----GVVFQNDNNIYAIGDFVEVEILGSGLKTLSGRP 495 >UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Aquificales RepID=RIMO_SULSY Length = 430 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 166/447 (37%), Positives = 254/447 (56%), Gaps = 33/447 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 KI F+SLGCPKNLVD+E ++ +L E + ++AD++++NTCGFI+ A +ES+E Sbjct: 2 KNLKINFISLGCPKNLVDTEVLIGKLNQENISFTANPEEADVILINTCGFIEPAKEESIE 61 Query: 66 AIGEA----LNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I EA N N K+IVTGCL + ++ + P+V + Q+ Sbjct: 62 TILEAVKLKQNSNKKIIVTGCLVERYKQELEKEIPEVDYFIDLKNQSQIPVLFD------ 115 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + + TP+H AYLKISEGC+H C+FC IP++RG S+PI ++ EAK Sbjct: 116 ----IKPKENTKRIISTPKHTAYLKISEGCDHTCSFCAIPNIRGKHRSKPIEALVEEAKY 171 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 L + GVKE+ ++SQDTS YG D+ K + L + L K+ W RL+Y+ Sbjct: 172 LANLGVKELNIVSQDTSYYGYDLYG----------KPMLFELLQHLEKIDGIKWIRLYYL 221 Query: 239 YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 YP +D + KIL Y+++P+QH+ +ILK M R + ++ + P+ Sbjct: 222 YPSTVDEDFFKFIKGSEKILHYIEMPIQHSEDKILKDMMRGYRKKKLYQILEWKEKYTPD 281 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPDQVPEEVK 356 +T+RS+ IVG+P ETEEDF+ + +F++EA+ D +G F YS EG A D++P++ K Sbjct: 282 MTIRSSVIVGYPTETEEDFENMKNFIQEAQFDWLGVFVYSHEEGTPAYQKHKDKIPKKEK 341 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLN 413 R N LQ+ I+ ++ + +G+E+ +IID EE IGRS A EIDGAVY+ Sbjct: 342 IRRLNEISALQENITEQKNKSLIGKELDIIIDGFSEEWETLPIGRSYRSAFEIDGAVYVE 401 Query: 414 GETNVKPGDILRVKVEHA-DEYDLWGS 439 V GDI++V+++ D+YD+ G Sbjct: 402 TTEPVNVGDIIKVRIKDTIDKYDVVGE 428 >UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6X2_ATOPD Length = 468 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 146/444 (32%), Positives = 227/444 (51%), Gaps = 15/444 (3%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + +++LGC KN VD++R+ L G+ V + AD+ I+NTC F+ SA +ES+E E Sbjct: 16 VLYITLGCAKNEVDTDRMRALLLASGFGEVADPESADVAIINTCSFLASATEESIETTLE 75 Query: 70 ALN------ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 +I+ GC+ ++ ++ E P+V + ++ V + P+ Sbjct: 76 IAEGASEGVRKLPIIMCGCVPSRYGAELNEQLPEVAAFVPADQEDGIVSIVADVLNIPEP 135 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + + ++ A++KISEGC+ C FC IP +RG SRP E+L E K L+ Sbjct: 136 TQSI-VAAHGMLRTIDGASAFVKISEGCDRFCAFCAIPYIRGHYHSRPAEEILQEVKELM 194 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 D GV+E+++I QDT +G D+ K M + E + W R+ Y+ P Sbjct: 195 DGGVREVILIGQDTGIWGSDMPDTEDGQTPTLAK-LMQKVAEVVRSYKGWIRVLYLQPEG 253 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 D++I + + ++LPY+DIP+QH + RILK M R GS+ + R P + LR Sbjct: 254 MTDELISTIRDTPEVLPYIDIPIQHCNERILKRMGRSGSIQELRKLFDRLRSEIPGMVLR 313 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 +T + GFPGET+E+ L DF++E D F YSP EG + DQVP+EVK ER Sbjct: 314 TTGMCGFPGETDEESDELYDFIQEQEFDYTSVFTYSPEEGTLGAKMSDQVPDEVKIERTQ 373 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEG----AIGRSMADAPEIDGAVYLNGETN 417 R + L +Q+ VG VIID ++E IG + AP+ DGAV++ E Sbjct: 374 RLLDLVEQLGFAATARHVGERCEVIIDGIEESDEGTELIGHTWFQAPDCDGAVHI-AEGE 432 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 GDI+ + + Y++ G V Sbjct: 433 ASVGDIVLCDLVDSFCYEMIGEIV 456 >UniRef50_A0LIM0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RIMO_SYNFM Length = 444 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 156/449 (34%), Positives = 238/449 (53%), Gaps = 26/449 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 VSLGC KNLVDSE ++++L GY++ P A +++VNTCGF++SAV+ES++ Sbjct: 3 SKSAALVSLGCAKNLVDSESMVSQLIELGYEMTPEVSQAALILVNTCGFLESAVRESIDT 62 Query: 67 IGEALNENG-----KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + K++V GC+ + ++ + P+V G + + + Sbjct: 63 VLQLAGYKASGSCEKLVVAGCMVQRYGKKLLGLLPEVDLFLGTSHCHALKSFIRDHEAGS 122 Query: 121 KHNPFLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 ++ + R AY+KI+EGC +RC FC+IP +RG SR ++L Sbjct: 123 SERLRIAFPDHVDNGADRHLVEGRSSAYVKIAEGCGNRCAFCLIPRLRGPYRSRRAVDIL 182 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 EA RLV G KE+ +++QDT+A+G D E S++ E++ KL W RL Sbjct: 183 REAHRLVACGAKELNIVAQDTTAFGSDRGE-------EHALVSLLESLEEIEKLE-WVRL 234 Query: 236 HYVYPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y YP ++I M++ K++PYLDIPLQH PRIL M R G+ + R Sbjct: 235 LYAYPDRITPELIRTMSQSRKVVPYLDIPLQHCVPRILASMGRSGTDPE--RIVDAIRSG 292 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + LR++ IVGFPGETE DFQ L F++ + +G F +SP G A +PD+VP + Sbjct: 293 IPGVALRTSLIVGFPGETEADFQALTAFVECTGFEHLGVFAFSPEPGTRAARMPDRVPPD 352 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVY 411 V +ER ++LQ+ IS RL+ VGR + V+++ E GR APE DG V Sbjct: 353 VAQERRKVLLELQRGISRRRLESLVGRVLPVLVEGFHPETDLLLTGRLAVQAPEADGTVL 412 Query: 412 LNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + PG+I+R +V A +YD+ Sbjct: 413 I-TDGIGTPGEIMRCRVTAAHDYDVEAEL 440 >UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APT3_9BACE Length = 460 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 117/460 (25%), Positives = 201/460 (43%), Gaps = 32/460 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPS--YDDADMVIVNTCGFIDSAVQESLE 65 K +LGC N ++E + L GY++VP + AD+ ++NTC + A ++S + Sbjct: 1 MKAALHNLGCKVNSYETEAMEQMLIAAGYEIVPFCEDEKADVYVINTCSVTNIADRKSRQ 60 Query: 66 AIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 + +A N N V+ GC V + G + +++E ++ Y+ +N Sbjct: 61 MLHKAKKQNPNAIVVAAGCYVQARGDELAADDMVDIVIGNNRKNRLVEIINDYIGNNSNN 120 Query: 124 PFL-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + AY+K+ +GCN C++CIIP RG + SR +V + Sbjct: 121 EAVVDIAKTHEYEELNIYDVCEHTRAYIKVQDGCNQFCSYCIIPYTRGRVRSRRPEDVTA 180 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDV----KHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 E +RLV+ G KE ++ S+YG+D + + ++ L E + + Sbjct: 181 EVRRLVEKGYKEFILAGIHLSSYGIDFEAPCDEAVDYRAANMPGSRLLELIEAVCSVEGV 240 Query: 232 -WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 RL P + + MAE + P+ I LQ LK M R + D K Sbjct: 241 KRLRLGSFEPRILTEAFVKRMAELEPVCPHFHISLQSGCDATLKRMNRRYTADEYEESCK 300 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R+ P + + IVGFP ET+E+F + ++L+ + FKYS +G A+ + Sbjct: 301 LLRKYFPNAAITTDVIVGFPQETDEEFAITKEYLERIHFYEMHVFKYSRRKGTAADRMDG 360 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-------GAIGRSMAD 402 QVPE VK R ++L++++S E + +G V+ +EV G + Sbjct: 361 QVPEPVKTARSAGLLELEKRMSREYRESALGSIQEVLFEEVAGTCDDCGTSVITGHTKTY 420 Query: 403 APEIDGAVYLNGETNVK-PGDILRVKVEHADEYDLWGSRV 441 I+ V L + +++ I VK+EH + G V Sbjct: 421 ---INVHVKLPADMSLEYINKICNVKLEHLSDD---GEWV 454 >UniRef50_C4V544 2-methylthioadenine synthetase n=3 Tax=Selenomonas RepID=C4V544_9FIRM Length = 519 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 109/443 (24%), Positives = 191/443 (43%), Gaps = 25/443 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + F++LGC N ++E + R GY++VP + AD+ ++NTC + ++S + I Sbjct: 92 RAAFMTLGCKVNQFETETMEGLFRARGYEIVPFEERADVYVINTCSVTHLSDRKSRQIIR 151 Query: 69 EALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 A N + V GC + V + G +++++V + + Sbjct: 152 RAARMNPTACIAVAGCYAQVSPEEVRGLEGVRVVIGTEERARIVDYVEEALHADGVVEEI 211 Query: 127 -------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + + R A+LKI +GC + C+FCIIP RG + SRP+ V E + Sbjct: 212 TDVMQARAFEDIPLHGVPHRTRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREME 271 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 +L AG +E+++ AYG+D+ R + + RL + Sbjct: 272 KLAAAGFREVVLTGIHLGAYGIDLPQRPTLADACRTALRTKEV--------RRLRLGSLE 323 Query: 240 PYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 +D++ L+ E + P+L +PLQ S +L+ M R + R P Sbjct: 324 SVELSEDLLSLVRTEPRFAPHLHLPLQAGSDNVLRAMNRRYDTAAFAQLLADVRRAVPGA 383 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFPGETEEDF LDF++ R+ F YS G A DQ+ V+ E Sbjct: 384 AISTDIIVGFPGETEEDFTAGLDFVRAMGFARMHVFPYSARRGTPAARRTDQIAPPVRRE 443 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R R L ++++ + +G V+ + + A G + + + + V Sbjct: 444 RAARMQALAEEMAEAYHRAALGTVDEVLFETEHDGVADGLTGTY-------IRVYTDAAV 496 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 G+++ +++ +WG RV Sbjct: 497 PRGELVPMRLVRLCRDGVWGERV 519 >UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MMU1_9FIRM Length = 446 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 159/451 (35%), Positives = 248/451 (54%), Gaps = 28/451 (6%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+G VSLGCPKN D+E +L ++ G+ +V AD+VI+NTCGFI SA +E++E I Sbjct: 6 KVGMVSLGCPKNQCDAELMLAKIAKAGFKIVNEAGLADVVIINTCGFIQSAKEEAIEEIM 65 Query: 69 EALNE-----NGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 EA++ N K+IVTGCL + Q+ E P++ + G + ++E ++ + + Sbjct: 66 EAISRKNDGINKKIIVTGCLAERYQKQMDEEFPEIDAVVGIAKNDDIVEIINSVMLDRRV 125 Query: 123 NPFLS----LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 F + ++ T HYAYL+I++GC+++C++C IP +RG + SR + ++ EA Sbjct: 126 ITFGDKLCHNMEGDKLQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKMENIIEEA 185 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 K+ + GVKE+++++QD +AYG+D+ K ++ L +QL K+ W RL Sbjct: 186 KKFAENGVKELVIVAQDVTAYGIDLYK----------KYALPDLLKQLCKIDGIKWIRLL 235 Query: 237 YVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++I + E K+L Y+DIP+QH + IL+ M R G + R Sbjct: 236 YCYPERMTDELIETIKTEDKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREI 295 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + LR+T I GFPGETEE F L +F+ + + +R+GCF YS E A +PDQV E Sbjct: 296 PGVVLRTTLITGFPGETEEQFSELAEFVNDIKFERLGCFAYSAEEDTPAAEMPDQVDEGE 355 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYL- 412 ++ R + Q+ E +G V+ + D + GRSM APEIDG +Y Sbjct: 356 RQRRADIITGEQEIRMGEYYAGMIGNTYEVVCEGFDRYSDMYFGRSMHFAPEIDGMIYFT 415 Query: 413 --NGETNVKPGDILRVKVEHADEYDLWGSRV 441 + + GD + VK+ E +L G RV Sbjct: 416 SAKDKGPLTIGDFVNVKITDVLENNLLGERV 446 >UniRef50_Q2LVR5 TRNA 2-methylthioadenosine synthase-like protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVR5_SYNAS Length = 451 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 112/454 (24%), Positives = 191/454 (42%), Gaps = 29/454 (6%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 +++ + K +LGC N +SE + L GY +VP AD I+NTC Sbjct: 10 LNRESLSIKAAIATLGCKVNQYESEGLGEALTRRGYTMVPFSSVADCYIINTCTVTARTN 69 Query: 61 QESLEAIGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 +S + I +A+ N ++VTGC P V I G +Q+ + + + Sbjct: 70 YQSRQIIRKAIRNNPEAVIVVTGCYAQTAPAEIAGIPGVTLIAGHAEKDQIPDLIARLLK 129 Query: 119 KPKHNPFLSLVPEQGV------KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + + + + A+LKI +GCN C++CIIPS RG S G Sbjct: 130 ERLEIRVGDIGQTRQFSSLAATRFKDHTRAFLKIQDGCNAWCSYCIIPSARGRSRSLAEG 189 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 VL + + G +E+++ AYG D ++ S+V L ++ + Sbjct: 190 SVLEQLAHMGRTGYREVVLTGIHLGAYGQDFSPQS----------SLVDLLRKVEEQHPV 239 Query: 232 -WTRLHYVYPYPHVDDVIPLMAEGKI-LPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 RL + P DD I L+ + + P+L IPLQ IL MKR + ++ Sbjct: 240 ERLRLSSIEPTEISDDFIALLRQSALLCPHLHIPLQSGDDSILTRMKRHYTTSFFKDLLE 299 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 + P+L + I GFPGE E F+ ++ ++ + + F YS G A A+PD Sbjct: 300 KLCRAIPDLAIGIDVIAGFPGEGEAAFERTVELIESLPVAYLHVFPYSVRPGTPAAAMPD 359 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEI 406 QV + K++R L + + GR + V+++E E + G S P Sbjct: 360 QVSPDEKKKRAEILRTLGTRKREAFARRFHGRSLRVLVEERRERSSGLRKGFSGNYLP-- 417 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 + + + +++V++E+ D + G Sbjct: 418 ---ILMTNADASQVNQLVQVQIENIDGTRISGRI 448 >UniRef50_Q2GCU4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Alphaproteobacteria RepID=MIAB_NEOSM Length = 471 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 120/457 (26%), Positives = 204/457 (44%), Gaps = 34/457 (7%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 K K + GC N+ DSE I + G+ + +DAD++I+NTC + A + Sbjct: 23 KKNNSLKKFHIKTYGCQMNVYDSEMIEKIVSGLGFTLSERAEDADLIILNTCNIREKAAE 82 Query: 62 ESLEAIG------EALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 + +G + E ++V GC+ E ++I V + GP S + E + Sbjct: 83 KLYSELGQIRLLQKKKQERILIVVAGCVAQAEGEEIMRRAENVDVVVGPQSIHSLPELIA 142 Query: 115 HY---------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 + F L E + P+ A+L I EGC+ C FC++P RG Sbjct: 143 KVNRQSGKAIKMEFDPIEKFDYLAEETRKRRVPQSSAFLSIQEGCDKFCAFCVVPYTRGA 202 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 SR EV EA L GVKEI ++ Q+ + Y G + ++ L + Sbjct: 203 EYSRSTEEVYREALSLTTKGVKEITLLGQNVNGY-------HGTLDSGNKVLNLGQLISR 255 Query: 226 LSKLGIWTRLHYVYPYPHV--DDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVD 282 L K+ R+ Y +P ++ A E K++P++ +P+Q S +ILK M R + Sbjct: 256 LGKIPSLKRIRYTTSHPVDMHKELYDAHANESKLMPFVHLPVQSGSDKILKQMNRKYTTA 315 Query: 283 RQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGA 342 L I +++ ++ S FIVGFPGE+++DFQ L +++ + FKYSP G Sbjct: 316 DYLKIINEFQNARSDIAFSSDFIVGFPGESDDDFQQTLALIEQVNYAQCYSFKYSPRPGT 375 Query: 343 DANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD 402 P Q+ EE K R + QL ++ E ++ +G+ + V+ D+ + GR+ Sbjct: 376 PGATYP-QISEETKNTRLQKLQQLLKEKQLEFNKKMIGKTVTVLFDKKHPDKISGRTE-- 432 Query: 403 APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 + ++N+ I+ ++VE A + L + Sbjct: 433 ----YMQQVFSDDSNLLD-KIVTMRVEDASTFTLKCT 464 >UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Thermotogaceae RepID=RIMO_FERNB Length = 431 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 151/441 (34%), Positives = 240/441 (54%), Gaps = 23/441 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ + LGC KN D L+ G++VV +DAD V+++TCGFI A QES++ I Sbjct: 5 KLYVIVLGCAKNEADFSLFKYHLKQLGHEVVDDVEDADGVVIDTCGFIVDAKQESIDTIL 64 Query: 69 -----EALNENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 + + KV VTGCL + + P+V G + + E ++ K Sbjct: 65 EFASIKKQKPDFKVYVTGCLVQRYPKDLPLEIPEVDGWFGVIPPKNLAESINKT--KKYI 122 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 +++ +G + YAY+KI++GC+ CTFC IP +G VSR + ++ E + L+ Sbjct: 123 TDPVAVYEFEGRVDSDLPYAYVKIADGCDRACTFCTIPKFKGGFVSRKLEDIEKEVRYLI 182 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYP 240 + G KEI++++QDT+ YGVD+ K + L ++++ + W R+ Y++P Sbjct: 183 ENGKKEIVLVAQDTTGYGVDLYG----------KQMLPELLKRINDIDGNFWIRVMYMHP 232 Query: 241 YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL 300 D+++ + K++ Y DIP+QH+S ILKLM R S + R + P+ L Sbjct: 233 DHVTDEILKGFSYEKVVKYFDIPIQHSSDNILKLMGRTKSTKELEELFDKIRSLYPQAVL 292 Query: 301 RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW 360 R++ IVGFPGET++DF+ L+DF++ DR+G F YS E A + LP++V + ++R Sbjct: 293 RTSIIVGFPGETKDDFEQLIDFIRTIEFDRLGGFVYSDEEDAASYNLPNKVSLKTAQKRL 352 Query: 361 NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP 420 + M++Q +IS R Q VG+ I V+ +E IGRS DAPE+DG V++ G Sbjct: 353 DTLMEVQAEISFLRNQRLVGKVIDVLFEEEVNGVIIGRSYMDAPEVDGNVFVKGHG---I 409 Query: 421 GDILRVKVEHADEYDLWGSRV 441 +VK+ AD YDL G V Sbjct: 410 NRFGKVKITEADTYDLEGELV 430 >UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Planctomycetaceae RepID=MIAB_RHOBA Length = 479 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 123/476 (25%), Positives = 218/476 (45%), Gaps = 54/476 (11%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 ++ + ++GC N++DSE ++ +L+ GY VV + +AD+++ NTC + A +++ Sbjct: 2 ISMTKTVYIKTVGCQMNVLDSEMVIADLKRHGYTVVDTPGEADLLLYNTCSIREQAEEKT 61 Query: 64 LEAIGEALN-----ENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYV 117 A+G+ + V GC+ K+ + I P V + GP + + + Sbjct: 62 YSALGKLKETKARHPEKTIGVMGCMAQKDQETIFRRAPFVDMVVGPGQLHAIPDMLTKVT 121 Query: 118 PKPKHNPFLS-----------------LVPEQGVKLTPRHY-AYLKISEGCNHRCTFCII 159 +S P + + P + AYL+I GC+ CT+C++ Sbjct: 122 SGEGRQMAVSLGRKDGKQTVVARSHETFDPLRDPTMRPTPFQAYLRIQIGCDKFCTYCVV 181 Query: 160 PSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSM 219 P+ RG R E++SEA+ L + G EI ++ Q ++Y H G +T M Sbjct: 182 PNTRGPEQGRSPEEIVSEARVLAEQGALEITLLGQTVNSY---------RHRGPDGETDM 232 Query: 220 VSLCEQLSKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMK 276 L E+L + R+ +V YP ++ + + K+ PYL +P Q S +LK MK Sbjct: 233 AGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRDLPKVSPYLHVPAQSGSDAVLKRMK 292 Query: 277 RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKY 336 R ++ + ++ + PE ++ S FIVGF GET+EDFQ + ++ R F+Y Sbjct: 293 RGYTIADYMEMFERIETVLPEASVSSDFIVGFCGETDEDFQKSVKLIERCRFKNSFIFQY 352 Query: 337 SPVEGAD-ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-- 393 S EG A L D VP EVK R N + +Q +IS E Q+ +G + V+++ ++ Sbjct: 353 SVREGTKAAANLIDDVPREVKAARNNELLAVQDRISKEDNQKLIGDTVEVLVEGPSKKAD 412 Query: 394 ---------GAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 GR++ D V +G + G ++ ++++ + L G Sbjct: 413 KSDLDAPIVQMTGRTIC-----DRIVVFDGNRR-QAGQLMDIQIDDVSSHTLIGRV 462 >UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=534 Tax=Proteobacteria RepID=MIAB_PSYCK Length = 497 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 117/461 (25%), Positives = 208/461 (45%), Gaps = 36/461 (7%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRT-EGYDVVPSYDDADMVIVNTCGFIDSAVQESL 64 K+ + GC N+ DS ++L L G +V + D+AD++++NTC + A ++ Sbjct: 42 ATKKVFVTTQGCQMNVYDSGKMLDVLGDSHGMEVTHNIDEADVLLMNTCSIREKAQEKVF 101 Query: 65 EAIGEA-----LNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVP 118 +G + + V GC+ ++E I++ P V + GP + ++ E Sbjct: 102 SELGRWRKLKEKRPDLVIGVGGCVASQEGDNIQKRAPYVDMVFGPQTLHRLPELYDQSHQ 161 Query: 119 KPKHNP-------FLSLVPEQGVKLTPRHY-----AYLKISEGCNHRCTFCIIPSMRGDL 166 + + P +S + P A++ I EGC+ C+FC++P RG+ Sbjct: 162 QREIAPKNRIGTVDVSFPSIEKFDFLPEPRVEGFKAFVSIMEGCSKYCSFCVVPYTRGEE 221 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 +SRP+ +VL+E L GV+EI ++ Q+ + Y + L + Sbjct: 222 LSRPLDDVLAEIDSLAAQGVREINLLGQNVNGY--------RGEKDDGSICRFAELLHYV 273 Query: 227 SKLGIWTRLHYV--YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 S + R+ Y +P DD+I A+ +++ +L +P+Q S IL MKR ++D Sbjct: 274 SHVDGVERIRYTTSHPLEFTDDIIDAYAQLPELVSHLHLPVQSGSNAILAAMKRNHTIDV 333 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 + +I + + I P++ L S FI+GFPGET++DFQ L+ KE D F YS G Sbjct: 334 YINQINKLKAIRPDIHLSSDFIIGFPGETDQDFQDTLNLAKELNFDHSYSFIYSKRPGTP 393 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADA 403 A LPD V + K+ER F ++ + + E VG V++++V + Sbjct: 394 AAELPDDVSFKTKKERLAEFQKVIIDSTLAKTHEMVGTTTRVLVEQVANRHPDC--LIGT 451 Query: 404 PEIDGAVYLNGET---NVKPGDILRVKVEH-ADEYDLWGSR 440 + V + + G I+ V++ + + G Sbjct: 452 ADNTRTVMFPYDVDKMDEMLGKIVSVRITDFVSPHMVKGEI 492 >UniRef50_A5GE34 MiaB-like tRNA modifying enzyme n=5 Tax=Geobacter RepID=A5GE34_GEOUR Length = 444 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 188/448 (41%), Gaps = 23/448 (5%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 + T + +LGC N +S + L +G+ V+P D AD+ ++NTC E Sbjct: 5 QETAMNTVAITTLGCKINQFESAAMSEALGKDGFQVIPFDDVADIYVINTCTVTSRTDAE 64 Query: 63 SLEAIGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S I A +N +++VTGC + P V I G + + + Sbjct: 65 SRRLIRRASRQNPSARIVVTGCYAQVAFEELSDMPGVNLILGNSEKKGIAALLKEIGDGR 124 Query: 121 KHNPFLSLVPEQG-----VKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + A+L++ GC+ C++CI+P RG S P+ E L Sbjct: 125 QVLVSDISREKDAGGAQLESFAEHTRAFLQVQNGCDAFCSYCIVPYARGRSRSVPLDEAL 184 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 + + G KE+++ YG+D+ + + + +L R+ Sbjct: 185 AGIRTFAAQGFKEVVLTGIHLGGYGLDLTPPLTLLDIL--------IAAEKQQLVERIRV 236 Query: 236 HYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 V P D +I +A K + P+L IPLQ + ++L M R + + +++ Sbjct: 237 GSVEPTEVSDALIAFLAGSKLVCPHLHIPLQSGNDQVLSRMNRKYAANLFREVVEKLVCA 296 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P++ + + I GFPGE+ E+F+ FL+ + F +SP G A + D V Sbjct: 297 LPDICIGTDIITGFPGESAEEFEQGYRFLESLPVAYFHVFPFSPRTGTPAATMGDHVRSS 356 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYLN 413 V +ER +L ++ + +G+E+ V+I +E G + G S P V++ Sbjct: 357 VIKERAKALRKLSEEKKKAYYRTFLGKELPVLIQNREENGMLKGLSRNYMP-----VFVK 411 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 G+ ++ + RV++ ++ G V Sbjct: 412 GDDSL-INNEQRVRITGVVREEVKGEVV 438 >UniRef50_B9L1I3 MiaB-like tRNA modifying enzyme YliG, TIGR01125 n=2 Tax=Thermomicrobia (class) RepID=B9L1I3_THERP Length = 470 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 162/447 (36%), Positives = 238/447 (53%), Gaps = 24/447 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 + V+LGC KN VDSE + L G D+A +++VNTCGF+ +A ES AI Sbjct: 6 RFHIVTLGCSKNQVDSEGMAQRLIARGLQPTDEPDEAAVLVVNTCGFLAAARAESRAAIE 65 Query: 69 EA---LNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 E +I GC+ + + E+ P + H + ++ V + P + Sbjct: 66 ELAARRRPGQIIIAAGCMVSLDQHRAELPPGLDAYVPTHDWNRIDAVVADLLGLPIPSVL 125 Query: 126 LSLVPEQGVKLTP--RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVD 183 S P R AY+KI++GC+HRC+FC IP ++G+ S+ E++ E + LV+ Sbjct: 126 ESTRDLPSFPRLPVRRPSAYVKIADGCDHRCSFCAIPLIKGNQRSKRPSEIVREIRELVN 185 Query: 184 AGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPH 243 AG KE+++++QDT YG D+ R G + + S+ E + L W RL Y+YP P Sbjct: 186 AGTKEVILVAQDTIRYGADLGLRNG------LPDLLRSIAEHVPDLP-WLRLLYLYPSPL 238 Query: 244 VDDVIPLMAEGKIL-PYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 + +I MAE K PYLDIPLQHA P +L+ M RP D I RE P++ LR+ Sbjct: 239 LFRLIDTMAELKPCVPYLDIPLQHADPVLLRRMMRPSDPDFYRRLIAYARERLPDVALRT 298 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 TFIVGFPGET+E F+ L DF+ E D VG F YS + + + D VP EV EER Sbjct: 299 TFIVGFPGETDEQFRRLYDFVAEMEFDHVGVFVYSREQPTPSARMEDPVPPEVAEERRAA 358 Query: 363 FMQLQQQISAERLQEKVGREILVIIDE----VDEEGAI-----GRSMADAPEIDGAVYLN 413 M+LQQ+IS R + VG+ + ++++ DE G GR+ APE+DG V++ Sbjct: 359 LMELQQRISWARNKTLVGKILPILVEGTGEVEDERGNRAPLSAGRAARHAPEVDGLVFVP 418 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSR 440 + G+ + V++ A+ YDLW Sbjct: 419 --EELPLGEFVTVRITQAEPYDLWAEP 443 >UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XWL0_9BACT Length = 450 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 153/448 (34%), Positives = 248/448 (55%), Gaps = 31/448 (6%) Query: 6 PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYD--DADMVIVNTCGFIDSAVQES 63 + +I +++GC KNLVDSE ++ + G++ + + ++ ++NTCGFI++A +ES Sbjct: 20 NKNQIDIITMGCSKNLVDSELLMKQFEANGFECTHDTEQPEGEIAVINTCGFIETAKEES 79 Query: 64 LEAIGEALNEN-----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYV 117 + I E +N K+ V GCL + ++ + P+V + G +Y+Q+L + Sbjct: 80 INTILEFVNRKEKGQLNKLFVMGCLSQRYKDELEKEIPEVDKFYGKFNYKQLLTDLGKA- 138 Query: 118 PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++ TPRHYAY+KI+EGC+ C +C IP + G SR + ++L E Sbjct: 139 -------DVTSCNGVRHLTTPRHYAYIKIAEGCDRHCAYCAIPLITGKHRSRKMEDILQE 191 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 ++LV GVKE VI Q+ + YGVD+ + + L +++ + W RL Sbjct: 192 VEQLVAQGVKEFQVIEQELTYYGVDLDGKHH----------ITELISRMADIKGVEWIRL 241 Query: 236 HYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 HY YP D++ ++A + + YLDI QH S +L M R S + IK+ R Sbjct: 242 HYAYPNQFPFDLLDVIAQKPNVCKYLDIAFQHISDHMLDRMHRHVSKQETINLIKEIRSR 301 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVPE 353 P + LR+T +VGFPGET+EDF+ L DF++E R +R+G F YS EG + D VPE Sbjct: 302 VPSIHLRTTLLVGFPGETDEDFEELKDFVREVRFERMGAFAYSREEGTYSAEHYEDDVPE 361 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 EVK++R + M +QQ+IS E + K+G+ VIID + + IGR+ +P++D V ++ Sbjct: 362 EVKQQRLDELMAIQQEISTELEETKIGQTFKVIIDREEGDYYIGRTEFCSPDVDPEVLIS 421 Query: 414 -GETNVKPGDILRVKVEHADEYDLWGSR 440 GE ++ G+ V + +DE+DL+G Sbjct: 422 IGEVPLRVGEFYNVYITDSDEFDLYGEV 449 >UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKI3_9ACTN Length = 460 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 145/447 (32%), Positives = 236/447 (52%), Gaps = 15/447 (3%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + I FV+LGC KN VD++R+ L +G+ V + ++AD+V++NTC F+ SA +ES+E Sbjct: 12 KKNILFVTLGCAKNEVDTDRMRALLFAQGFSEVDTPNEADIVLINTCSFLASATEESIET 71 Query: 67 ---IGEALNENGK---VIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 I E + + +++ GC+ ++ ++ E P+V + ++E V + Sbjct: 72 TLQIAEGASHGVRSLPIVMCGCVPSRYGSKLPEELPEVAAFVRADEEDGIVEVVSEVL-G 130 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + P + ++ AY+KIS+GC+ C FC IP +RG SRP E+LSE Sbjct: 131 IERTPQSVIAAHGMLRTVEGASAYVKISDGCDRFCAFCAIPYIRGHYQSRPADEILSEVS 190 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVY 239 L++ GV+EI++I QDT +G D+ T + M + + + W R+ Y+ Sbjct: 191 SLMEGGVREIILIGQDTGIWGNDIAE-TNTGEVPTLAWLMRQVAQVVRPYNGWVRVLYLQ 249 Query: 240 PYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D++I + + + LPY+DIP+QH S R+L M R GS + + R P + Sbjct: 250 PEGMTDELISTIRDTPECLPYIDIPIQHCSERVLARMGRSGSAPELRSLFDRLRREIPGM 309 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 LR+T + GFPGETEE+ L DF++E D F YSP EG ++P+QVP+E+K E Sbjct: 310 VLRTTGMCGFPGETEEESDELYDFIQEQEFDYTSVFTYSPEEGTAGASMPNQVPDEIKME 369 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG----AIGRSMADAPEIDGAVYLNG 414 R R + L +++ VG VIID +++ IG + AP+ DGAV++ Sbjct: 370 RTQRLIDLVEELGFAGTARHVGERCEVIIDGIEDTDEGFELIGHAWFQAPDCDGAVHI-A 428 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSRV 441 + GDI+ + + Y++ G V Sbjct: 429 NGEARVGDIVLCDLVDSFCYEIIGEIV 455 >UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDC7_ANAPD Length = 431 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 108/446 (24%), Positives = 196/446 (43%), Gaps = 33/446 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + ++LGC N +SE + + +GY+ ++AD+ ++NTC + + ++S + Sbjct: 2 KNTFNIITLGCKVNQYESEAVEEIFQAKGYE--KKQNNADIYVINTCTVTNMSDRKSRQM 59 Query: 67 IGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN- 123 I A +N + V GC + + V + G + E+V++ + + K Sbjct: 60 ISRARRDNPEAVIAVMGCYSQVKPEEVAAIEGVDVVLGSRNKEEVVDLCENVLQNKKVID 119 Query: 124 ------PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 ++ + AY+KI +GCN C++C+IP RG++ SR + + E Sbjct: 120 KVLSFSETKTIEELEISNQEAMTRAYMKIQDGCNMYCSYCLIPYARGNIASRDMDSIKKE 179 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 AKRL G KEI++ ++YG D+ TS++ + E++SK RL Sbjct: 180 AKRLAQNGYKEIVLTGIHVASYGKDL----------RNGTSLIDVIEEVSKTDGIERIRL 229 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 + P D + M K + + LQ S ILK M R ++ RE+ Sbjct: 230 SSMEPRHITRDFLERMKATEKACDHFHLSLQSGSDEILKAMNRKYDTKIFKEKVDLIREV 289 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P L + IVGFP ETE++ + DF+KE + + FKYS +G A ++ +V Sbjct: 290 FPNAGLTTDIIVGFPTETEKNHEETKDFVKEIKFAKTHLFKYSKRDGTKAASMKPEVNGN 349 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAVYL 412 +K+ER +++ L+ ++G+ + V+ + E G S + Sbjct: 350 IKKERLKELEAIEEVNRLNFLKNQIGKTLSVLFESKSDMEGYKSGYSTNYL-------RV 402 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 N + ++ +I V + +L G Sbjct: 403 NVKDDIGDNEIRDVLITEIKNDELIG 428 >UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJG9_9BACT Length = 423 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 122/438 (27%), Positives = 203/438 (46%), Gaps = 30/438 (6%) Query: 19 KNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL-----NE 73 N DS RI G+ ++ D +IVNTC + ++ AIG Sbjct: 1 MNEYDSLRIAAVFDKIGFTEAEEMEEGDYLIVNTCSVREKPQHKAESAIGRFRQIKRRRP 60 Query: 74 NGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQ 132 K+ GC+ +E + + + + + + G ++ E V H + + Sbjct: 61 EVKIGFCGCVAQQEGENLLKTNKDIDFVVGTDGLHRLEEVVAHVEAGERLSDTQVNEGGL 120 Query: 133 GVKLTPR---HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEI 189 + + R +++ I +GCN+ C++CI+P +RG SR E++ E K L D G +EI Sbjct: 121 EIDIFNREVSVSSFVTIMKGCNNFCSYCIVPYVRGREKSREQSEIIDEIKYLADKGAREI 180 Query: 190 LVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV--YPYPHVDDV 247 ++ Q+ ++YG + S L +++S + R+ +V +P +++ Sbjct: 181 TLLGQNVNSYGTALTD----------PVSFPELLDKVSDVEGIKRIRFVTSHPKDFSNEL 230 Query: 248 IPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306 I +M KI YL +PLQ S +L+ M R + D R+ + +E+ P+L L S FIV Sbjct: 231 IDVMRGNDKICEYLHLPLQSGSNAVLQKMNRKYTYDHYKERVLRAKEMIPDLALSSDFIV 290 Query: 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366 GFPGETEEDFQ + L+E R D + F YS G A + D VP EVK+ R + + Sbjct: 291 GFPGETEEDFQSTMKALEEIRYDMIYAFNYSTRPGTKAESFNDDVPLEVKKMRLAKLLDA 350 Query: 367 QQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEIDGAVYLNGETNVKPGDI 423 Q++I AE + V+++ ++G GR+ + V + ET + GD Sbjct: 351 QKRIIAENSAAYQDLVVEVMVEGESKKGAGQYSGRNRQNR-----VVNFSSETILSSGDF 405 Query: 424 LRVKVEHADEYDLWGSRV 441 + VK+ L G RV Sbjct: 406 VNVKITEPRPNSLLGERV 423 >UniRef50_Q3ZYS0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=5 Tax=Dehalococcoides RepID=MIAB_DEHSC Length = 418 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 104/445 (23%), Positives = 189/445 (42%), Gaps = 42/445 (9%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P ++GC N +S+R+ GY + +DA++V+VN+C + A + + Sbjct: 1 MPGYYLWTIGCQMNQAESDRLGRLFELWGYSLADKAEDAELVLVNSCVVREHAENKVVNR 60 Query: 67 I-----GEALNENGKVIVTGCLGAKEDQI-REVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + N K+ +TGCL ++ + ++ P V I GP S E ++ Sbjct: 61 LHLLRSLKNKNPKLKIALTGCLVGQDISLIKKKFPFVDYIFGPGSMPDWREIPEGFI--- 117 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + L P A + I +GCN+ CT+C++P RG SR I E+ E Sbjct: 118 -------------LPLRPPVSANVTIMQGCNNFCTYCVVPYRRGREKSRSIAEIGCEVAE 164 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 LV G +E++++ Q+ +YG D+ P K + L L + R Sbjct: 165 LVRRGSREVVLLGQNVDSYGHDL----------PEKPCLADLLSALHDITGLLRIRFLTS 214 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P +I MA K+ L +P+Q IL M+R + + +++ + P+ Sbjct: 215 HPKDISQKLIDAMAHLPKVCRSLSLPVQSGDDTILASMRRGYTNQQYRELVERIKTAMPD 274 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPDQVPEEVK 356 ++L++ IVGFP E EE F + + D + YSP A + D VP K Sbjct: 275 ISLQTDLIVGFPSENEEQFNQSYKLMADIGYDAIHVAAYSPRPQTVAARDMADDVPVIEK 334 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET 416 + R LQ++ + + V+++ + + GR++ V+L + Sbjct: 335 KRRLKLIEDLQKETVGKANAALMDTFAEVLVEGLQKNKWQGRTLGGK-----LVFLESDL 389 Query: 417 NVKPGDILRVKVEHADEYDLWGSRV 441 ++ G +++VK+ + L V Sbjct: 390 PLE-GCLVKVKIFKTSPWSLQAKLV 413 >UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYJ0_9FIRM Length = 440 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 124/456 (27%), Positives = 212/456 (46%), Gaps = 37/456 (8%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M+ + K ++ GC N DSE I L++ G ++AD+V++NTC ++A Sbjct: 1 MNDINAL-KYNIITFGCQMNERDSESIAGILKSHGLTSAS-IEEADIVVINTCSIRENAN 58 Query: 61 QESLEAIG---------EALNENGKVIVTGCLGAKED---QIREVHPKVLEITGPHSYEQ 108 + +G + ++ V V GC+ + + ++ P V I G H+ ++ Sbjct: 59 NKFYGTLGIVKNIKKKLKKNGDDLVVCVCGCMMQEGEVVEDLKARFPFVDVIFGTHNIDR 118 Query: 109 VLEHVHHYVPKPKHNPFL---SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 V + + + + + + + E V +H A++ I+ GCN+ CT+CI+P RG Sbjct: 119 VYDLIIKTIETKRREIEILENAEIKEMPVDRVNKHKAFVNITFGCNNFCTYCIVPYTRGR 178 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQ 225 SR + ++L E V G KE+ + Q+ ++Y + + + Sbjct: 179 EKSRSLDKILGETADAVSLGAKEVTFLGQNVNSY------------RGENGENFRDVLVE 226 Query: 226 LSKLGI--WTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDR 283 SK+ R +P D++I +M+ KI+P++ +P+Q S ILK M R +R Sbjct: 227 ASKIQGLERIRFMTSHPKDLTDELIDVMSLDKIMPHIHLPVQSGSSEILKRMNRHYDRER 286 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 L I + + ++ + + IVGFP ETEEDF LD ++ AR D F YS Sbjct: 287 YLEIIDKIYSLNEDIAITTDIIVGFPTETEEDFSKTLDLVRRARFDAAFTFMYSKRRNTK 346 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADA 403 A QV R++ +L + IS E+ ++ +GR I V++D+++ + A GRS Sbjct: 347 AANFDGQVDRVEMGRRFDMLSELLKDISFEKNKKFIGRRIKVMVDKIEGDNAEGRSPE-- 404 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 V G N+K GDIL V V+ A + L G Sbjct: 405 ---FKLVKFYG-KNIKKGDILDVVVDRASPFSLSGK 436 >UniRef50_A5N6M6 Predicted oxidoreductase n=21 Tax=Clostridium RepID=A5N6M6_CLOK5 Length = 434 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 103/439 (23%), Positives = 196/439 (44%), Gaps = 23/439 (5%) Query: 14 SLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNE 73 +LGC N ++E + + + Y++V + AD+ ++NTC + ++S + I A + Sbjct: 3 TLGCRVNQYETEAMAEKFIEKEYELVNFEEYADVYVINTCTVTNMGDKKSRQMIHRAKRK 62 Query: 74 N--GKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS---- 127 N + V GC V + G + +L V+ + +S Sbjct: 63 NSSAVIAVVGCYSQIAPDEVSKINGVDVVLGTKNKGDILHFVNKAFKDEEKIIKVSHVLK 122 Query: 128 ---LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 + R A+LKI +GCN C++C+IP RG + S+ +++ E K+L Sbjct: 123 NKTFEDLNISEYQNRTRAFLKIQDGCNRFCSYCLIPFARGPVCSKEPDKIIKEVKKLQVN 182 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYP 242 KEI++ ++YGVD+ +++ + E++ K+ R+ + P Sbjct: 183 NFKEIILSGIHIASYGVDISGS----------WNLIKILEEIDKIKGIDRVRIGSIDPKF 232 Query: 243 HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLR 301 +D+I MA K+ P+ + LQ L M R + + + R+ ++++ Sbjct: 233 FTEDIINRMASLTKLCPHFHLSLQSGCDSTLNRMNRKYTTTEYEKIVYKLRDSIKDVSIT 292 Query: 302 STFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWN 361 + IVGFPGETEE+F DFL + L ++ FKYS EG A + +Q+ ++K+ER + Sbjct: 293 TDIIVGFPGETEEEFYKTYDFLNKIELSKIHVFKYSRREGTKAADMKEQIDGKIKDERSS 352 Query: 362 RFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 + ++L +++ + + +G + V+ ++ I P + + E G Sbjct: 353 KIIKLNERLENKFMNRFLGNNMDVLYEQKVSGDKI-YYEGYTPNYIKVIAESAEGENLEG 411 Query: 422 DILRVKVEHADEYDLWGSR 440 +L K+E E + G Sbjct: 412 KVLNTKLESVKEGYILGRI 430 >UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP4_9CHLO Length = 456 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 162/464 (34%), Positives = 254/464 (54%), Gaps = 43/464 (9%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI---- 67 VSLGCPKN VD E +L +L G+D++ ++DAD +IVNTCGF++ A ES++AI Sbjct: 1 MVSLGCPKNTVDGEVMLGDLFANGFDIIDEHEDADAIIVNTCGFVEDAKNESVDAILAAA 60 Query: 68 -----GEALNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYV---- 117 E + KVIVTGCL + +++ + P+V + G +Y+ + + + Sbjct: 61 AMKAEQEQGGKKKKVIVTGCLAQRYAEELADEMPEVDVVMGFENYKDLPNTLGEQLGVET 120 Query: 118 -------PKPKHNPFLSLVPEQ----GVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 + + + P + +LTP+HYAYL+++EGC+H+CTFC IP RG Sbjct: 121 GAAADGAKRGRVRVGTASPPFRPEALRKRLTPQHYAYLRVAEGCDHKCTFCAIPGFRGKF 180 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL 226 S+P ++ EAK L D G +E+ +I++DT+ +G+D+K G + L E L Sbjct: 181 RSKPWDPIIEEAKALADTGARELCLIAEDTNQWGMDLKASDG--------RGLAELLEAL 232 Query: 227 SKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDR 283 + + W R+ Y YP D +I +A+ ++ Y+DIPLQH + L M RP Sbjct: 233 AVIDGVEWIRILYAYPSYFSDPLIDAIADIPQVAKYIDIPLQHITNLSLLRMNRP-PRQH 291 Query: 284 QLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAD 343 + + R+ P L LR+TFI GFPGETEE+ + L+ F +E + +R+G F YS +G Sbjct: 292 TEDLLYKLRDRIPGLALRTTFISGFPGETEEEHEDLMRFCREFKFERLGAFAYSEEDGTP 351 Query: 344 ANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMA 401 A PDQV + V++ R ++ + QQQIS + +VGRE+ VIID + E GR+ Sbjct: 352 AATYPDQVEQAVRDLRRDQLIAQQQQISEDFAASRVGREVDVIIDGYNPEFDAWTGRTSL 411 Query: 402 DAPEIDGAVYLNGETN----VKPGDILRVKVEHADEYDLWGSRV 441 +AP+ID V++ T ++ G + R K+ +DL + V Sbjct: 412 EAPDIDPIVFVADPTGGQRALEMGQMRRCKIVGTSLFDLEANLV 455 >UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=4 Tax=Treponema RepID=MIAB_TREPS Length = 456 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 109/456 (23%), Positives = 212/456 (46%), Gaps = 27/456 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 F + GC N+ +S + L G+ D++I+NTC +A + Sbjct: 1 MTYFFETYGCQMNVAESASVEQLLLARGWTKAVDAQTCDVLIINTCSVRITAETRVFGRL 60 Query: 68 GEALNENGK----VIVTGCLGAK-EDQIREVHPKVLEITGPHS---YEQVLEHVHHYVPK 119 G + K +I+ GC+ + D+I++ P++ + G + +E + + + + + Sbjct: 61 GLFSSLKKKRAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFESIFQEIEQKLTQ 120 Query: 120 PKHN-PFLSLVPEQGVKLTPRHYA----------YLKISEGCNHRCTFCIIPSMRGDLVS 168 + F+S + R +A ++ I GCN+ C+FCI+P +RG +S Sbjct: 121 KDYRFEFISERYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSFCIVPYVRGREIS 180 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAY-GVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 R + +L E L + GV+EI ++ Q+ ++Y G D + + +V CE Sbjct: 181 RDLDAILQEVDVLSEKGVREITLLGQNVNSYRGRDREG--NIVTFPQLLRHLVRRCEVKD 238 Query: 228 KLGIWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 ++ W R +P DD+I +A E ++ + +P+QH + +LK M+R + ++ L+ Sbjct: 239 QIK-WIRFVSSHPKDLSDDLIATIAQESRLCRLVHLPVQHGANGVLKRMRRSYTREQYLS 297 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + + + P + L + ++GFPGETEEDF+ LD ++E D + Y+P EG A Sbjct: 298 LVGKLKASVPNVALSTDILIGFPGETEEDFEQTLDLMREVEFDSAFMYHYNPREGTPAYD 357 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 PD++P+ + R R + LQ + ++++ +VG+ + V+++ + E+ Sbjct: 358 FPDRIPDATRIARLQRVIALQMSTTLKKMRARVGKTLPVLVESRSRNNPE--ELFGHTEL 415 Query: 407 DGAVYLNGETNV-KPGDILRVKVEHADEYDLWGSRV 441 L G+ + G + V+V+ L V Sbjct: 416 GEMTVLEGKVDPTYIGRFVDVQVKEVRGRTLRAHLV 451 >UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUN0_DESHD Length = 439 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 122/438 (27%), Positives = 205/438 (46%), Gaps = 30/438 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + FV+LGC N +SE + R GY VV S + AD+V+VNTC ++ +S + I Sbjct: 12 VCFVTLGCKVNQTESEALGQLFRNNGYHVVSSTEKADVVVVNTCTVTNTGGAKSRQTIRR 71 Query: 70 ALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL- 126 + + V+V GC V + G ++LE + + + + Sbjct: 72 MVKAHPDAFVVVMGCYAQTAPGEILGIAGVDLVLGTQDRGKILELIDQVKKEQQPKSSVR 131 Query: 127 ------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + ++ R A LKI EGCN CT+CIIP RG + SR ++EA++ Sbjct: 132 TIWDAKTFEELPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEK 191 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 LV AG KEI++ T +YG D+ + L + L+++ RL + Sbjct: 192 LVAAGYKEIVLTGIHTGSYGEDLGED----------WDLARLVKALAQIKGLHRLRLSSI 241 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P ++I ++ + P+L IPLQ S IL MKRP +V I++ + P Sbjct: 242 EPMEFTPELIDVIINYPAVCPHLHIPLQCGSDAILTRMKRPYTVKEFKELIQRLTSLQPG 301 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + + IVGFPGETE++FQ L+ ++ + F YS EG A P+Q+P ++KE Sbjct: 302 IAITTDVIVGFPGETEQNFQETLETVRSCGFSGIHVFPYSKREGTPAAKYPEQIPNKIKE 361 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDGAVYLNGET 416 ER +++ ++ + ++ +G+ + V+I+ V EG A G + V+L Sbjct: 362 ERVKALLEVARESQEDYVRRFIGQRVEVLIERVSPEGVAAGHTGNYI-----QVHLPPRE 416 Query: 417 --NVKPGDILRVKVEHAD 432 + G+++ +E Sbjct: 417 GKPWEGGELVECVLEKNH 434 >UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C4FYU3_ABIDE Length = 515 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 120/476 (25%), Positives = 208/476 (43%), Gaps = 46/476 (9%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + GC N DSE+I L G++ D VI+NTC ++A Q Sbjct: 48 ENAGKRLTFNCNTFGCQMNFRDSEKIAGILEKIGFENTED-KSPDFVILNTCTIRENADQ 106 Query: 62 ESLEAIGEAL-----NENGKVIVTGCLGA---KEDQIREVHPKVLEITGPHSYEQVLEHV 113 + +G N N + + GC+ ++RE + + I G H+ ++ E V Sbjct: 107 KVYGNLGYLKKLKELNPNMIIALCGCMMQETTVVQKLRESYSFIDLIYGTHNIYKLAELV 166 Query: 114 HHYVP------------------KPKHNPFLSLVPEQGVKLTPRHY-----AYLKISEGC 150 K + ++ V+ P A + I+ GC Sbjct: 167 FAMFALKSYAAHHPVKKNGKYKIKHSMLVDIWKDTDKIVEDLPDERKYSFKASVNITYGC 226 Query: 151 NHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFH 210 ++ CT+CI+P +RG SR G+++ E K L DAGV EI+++ Q+ ++YG ++ G Sbjct: 227 DNFCTYCIVPYVRGRERSRRPGDIVKEVKCLADAGVIEIMLLGQNVNSYGKGLEGEKGE- 285 Query: 211 NGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP--HVDDVIPLMAEG-KILPYLDIPLQHA 267 + +L + K+ R+ ++ P+P D++I ++A+ KI ++ +P Q Sbjct: 286 -----PVTFANLLRMVEKVEGIKRIRFMTPHPKDFSDELIEVIADSEKICKHIHLPFQAG 340 Query: 268 SPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEAR 327 S +L+ M R + + L + + P++ L + IVGFPGETEEDF+ LD +KE R Sbjct: 341 SNNVLRRMNRRYTKESYLELAGKIKTRIPDIALTTDIIVGFPGETEEDFEDTLDVVKEVR 400 Query: 328 LDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVII 387 F+YS G A + DQV E + R+ R + + ++ KVG V+ Sbjct: 401 YQSAYMFEYSKRTGTPAATMEDQVDAEAVKRRFKRLQDTVAEYADDKFGNKVGCMAEVLA 460 Query: 388 DEVDEEGAIGRSMADAPEIDGAVYLN---GETNVKPGDILRVKVEHADEYDLWGSR 440 +EV+ E + + + V+ G +L+VK+ + L G Sbjct: 461 EEVNSEEPL--IITGRMSDNTLVHFKVPTDNKEDYIGKLLKVKITENCRFYLMGEL 514 >UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGL8_DESAA Length = 451 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 153/454 (33%), Positives = 247/454 (54%), Gaps = 25/454 (5%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 S Q + VSLGC +NLVDSE IL L + G+ + +A+ +I+N+CGF+ +AV Sbjct: 3 SNTDNQEIVHLVSLGCVRNLVDSELILGALASGGFALTEDPAEAETIIINSCGFVRAAVD 62 Query: 62 ESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 E+++ + E + ++++ GC+ + ++ E P++ + GP +++ ++E + Sbjct: 63 ETIDVVLEMAHYKEEGRCQRLVLCGCMAQRYGKELEEALPELDMVVGPGAHKDIVELLRR 122 Query: 116 YVPKPKHNPFLSLVPEQGVKLTP----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 P S P Q H AY+KISEGC RCTFC+IP +RG SRP+ Sbjct: 123 PTGFICQVPDPSTAPLQQASFPRICSTPHMAYIKISEGCPDRCTFCMIPQLRGAWRSRPL 182 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI 231 +++ EA L+ G KEI++++QDT+AYG+D + +TS+ L L +L Sbjct: 183 DDIVEEAGNLIQWGAKEIILVAQDTTAYGLDFDKQ--------NRTSLDQLLSSLCRLEG 234 Query: 232 --WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 R Y +P D ++ A + ++ Y D+P+QH S RILK+M R + D L Sbjct: 235 ETRFRFLYGHPNRVTDALLETAASQPRVCSYFDLPVQHGSDRILKMMGRKNTRDEMLRLF 294 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 ++ R P++ LR+T +VGFPGETEEDF L++F++EAR D +G F YS E ++ LP Sbjct: 295 EKIRATVPDVALRTTALVGFPGETEEDFNQLVEFVQEARFDHLGVFAYSDAEEIPSHRLP 354 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE---GAIGRSMADAPE 405 D VPE+ +R + M Q IS + ++VG+ ++ + G++ AP+ Sbjct: 355 DHVPEDTAIKRRDYIMDRQNTISLDNNADRVGKTYTALVLGESGDPEYPYWGKTCLQAPD 414 Query: 406 IDGAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 +DG ++ G ++ PG + RV V AD YDL Sbjct: 415 VDGVTFIQG-EDLGPGRLARVTVHGADVYDLLAE 447 >UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Thermotogaceae RepID=RIMO_PETMO Length = 435 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 150/446 (33%), Positives = 249/446 (55%), Gaps = 23/446 (5%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K V LGCPKN D E L+++GY + A+ + ++TCGFI+ A +ES+E Sbjct: 1 MKKFHIVKLGCPKNDADMEIFKGLLQSKGYKYESNPQLANYIFIDTCGFIEEAKKESIET 60 Query: 67 IGEA-----LNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 I E N+N KVI GCL + D I + P++ + G S + ++E + + Sbjct: 61 IFEYVSLKDNNKNLKVIPIGCLTQRYFDDILKDIPEIDGLYGVLSPKTIVEKIENGEYFF 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 K + +L + + HYAY+KI +GC+ C FC IP+ +G SR I E+ E + Sbjct: 121 KRDIPETLYDCKIRAIPDSHYAYVKIGDGCSRNCAFCSIPTFKGKPKSRSIEEINEEVEF 180 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 LV GVKEI+++SQD + YG+D K ++ L ++L+ + W R+ Y+ Sbjct: 181 LVSKGVKEIILVSQDNTLYGIDNYQ----------KQALPDLLDKLNNIKGKFWIRVMYL 230 Query: 239 YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P +++I + K+L Y D+P+QH S +IL+ M R + + ++ R+ Sbjct: 231 HPDFLSEEIIESIHRNEKVLNYFDVPIQHISDKILQSMGRHKKRNELIKLFEKIRKEPS- 289 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 +R+T +VGFPGE EDF+ L+DF+KE + +R+G F +S E + LP+Q+ E++K+ Sbjct: 290 -AIRTTLMVGFPGEKAEDFEELVDFVKEIKFERMGSFIFSKEENTKSFTLPEQIDEQIKK 348 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN--GE 415 +R N M +Q +IS +++ +G + V+++E ++ +GRS DAPEIDG VY+ G+ Sbjct: 349 QRQNELMTVQSEISKNIMEKYIGETLEVLLEEKEDNVYVGRSYLDAPEIDGNVYIKNFGD 408 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 + G+ ++V + + EYDL G V Sbjct: 409 KELTFGNFVKVTITGSYEYDLEGEIV 434 >UniRef50_C0GKG0 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKG0_9FIRM Length = 440 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 170/446 (38%), Positives = 243/446 (54%), Gaps = 26/446 (5%) Query: 9 KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG 68 K+ VSLGC KNLVDSE +L L +G+ + + A ++I+NTCGFID+A +ES+ I Sbjct: 5 KVAVVSLGCAKNLVDSETMLGLLNEDGFTLTTDPEKAHVIIINTCGFIDAAKEESIAKIL 64 Query: 69 EALNENGK----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHN 123 E K ++ GC+ + D++ + P+V + G + + + K + Sbjct: 65 EMAAYKEKNCRLLLAAGCMAQRFADELLDELPEVDGLFGTNDVHGAAVAIRRGLAGEKVS 124 Query: 124 ----PFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 F + TP H AYLKI+EGC++RCT+C IP++RG SR V+SEA+ Sbjct: 125 FTQGEFAGSDDAPRLLSTPSHTAYLKIAEGCDNRCTYCAIPAIRGPYQSRDGQAVVSEAQ 184 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 L GVKE+ +I+QD + YG D K + L +L+ + W RL Y Sbjct: 185 SLAAGGVKELNLIAQDITLYGTDRTG----------KAQLPKLLGELAAIDGVHWIRLLY 234 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP +I +A E K+ YLD+PLQH S +IL+ M R + D+ L I+ R P Sbjct: 235 AYPERLDQRIIEAVAREEKVCKYLDLPLQHGSDKILRRMGRKTTADKILKLIETLRREVP 294 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + LRS+FI GFPGE EE+F +L FLKEA+LDRVG F YS EG A A +QVP EVK Sbjct: 295 GIVLRSSFIAGFPGEGEEEFGEMLAFLKEAQLDRVGFFAYSREEGTPAAAYSNQVPAEVK 354 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDE---VDEEGAIGRSMADAPEIDGAVYL- 412 EER R + LQ IS ++ Q+ VG+ + ++D D + RS APE+DG + + Sbjct: 355 EERVRRAVALQSAISEKKQQQLVGKTVTAMVDGSSAQDPSILLARSYMQAPEVDGYIRIQ 414 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 N + + G +L V + D YDL Sbjct: 415 NSDKKAQKGGLLPVTITGFDGYDLLA 440 >UniRef50_C9M5C2 RNA modification enzyme, MiaB-family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C2_9BACT Length = 431 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 161/446 (36%), Positives = 246/446 (55%), Gaps = 32/446 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 V+LGCPKN DSER+ + G+ + + D++++NTCGFI AV+E + Sbjct: 1 MKTAHIVTLGCPKNEADSERLAGIMARAGFSLTDKSEGVDLILLNTCGFIQPAVEEGIST 60 Query: 67 IGEALNENGK-----VIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + + + V GC+ + D +++ P V +++++E + Sbjct: 61 MLDMETMKARGDVKALAVVGCMVNRYGDDLKKEFPTVDYWARSEQWQELIESMGATYLGD 120 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + TP YLKISEGCN +C++C IP +RG L SRPI E++ EA R Sbjct: 121 GRHILT---------RTPWTR-YLKISEGCNCQCSYCAIPGIRGRLCSRPIDELVQEAGR 170 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL---GIWTRLHY 237 LV G KE+ ++ Q+ + YG D+ K S+ L +L K +W RL Y Sbjct: 171 LVSEGAKELCLVGQELTEYGADLYK----------KRSLPKLLTELEKTLPQSVWLRLFY 220 Query: 238 VYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 ++P ++ +A K I+P+LD+P+QH ++L+ M RP + + K REI P Sbjct: 221 LHPSHLDTALLEQIASSKQIVPWLDVPIQHIDNQVLERMARPPVETKIRSLFKIAREINP 280 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 + R+T +VGFPGET F LLDF+++ + DR+G F YSP +G A + PDQ+PE+ K Sbjct: 281 DFAFRTTLMVGFPGETRRQFDRLLDFVEDIQFDRLGAFTYSPEDGTKAASFPDQIPEDEK 340 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYLNGE 415 R++ M LQQ IS R VGR + V+++EVD++G GRS DAPEIDGAV L+G Sbjct: 341 GRRYDELMSLQQSISRRRQALFVGRRLDVLVEEVDQDGTRWGRSYRDAPEIDGAVALSGS 400 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 + +PGDI+ ++ + EYDL+G V Sbjct: 401 AS-QPGDIVSALIDDSSEYDLFGRPV 425 >UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Bacteria RepID=RIMO_PORG3 Length = 434 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 148/449 (32%), Positives = 238/449 (53%), Gaps = 32/449 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDA--DMVIVNTCGFIDSAVQESL 64 + ++ ++LGC KNLVDSE ++ + + GY V ++V+VNTCGFI A +ES+ Sbjct: 3 RNRVDVITLGCSKNLVDSEVLMRQFLSNGYTVHHDPASVCGEIVVVNTCGFIGDAQEESV 62 Query: 65 EAIGEALNENGK-----VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 I E + + V GCL + + +++ P+V G ++Q++ H+ Sbjct: 63 NTILEMVEAKKAGRIGSLYVMGCLSERFREDLKKEIPEVDAYYGKFDWKQLISHLGKS-- 120 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + + TPRHYAYLKISEGC+ C++C IP + G SRP+ +++ E Sbjct: 121 ------YYAEAENRRKLTTPRHYAYLKISEGCDRSCSYCAIPIITGRHRSRPMEDLVEEV 174 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 + LV G +E +I+QD + YG+D+ + L +LS + W RLH Sbjct: 175 RMLVKHGTREFQLIAQDLTFYGLDLYGAN----------RLAELTARLSDIKGVEWLRLH 224 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 Y YP D++P+M E + YLD+ LQH S +L+ M+R + I++ R Sbjct: 225 YAYPAQFPLDLLPVMRERPNVCKYLDMALQHISDPMLRRMRRRITKAETYELIERIRTEV 284 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVPEE 354 P + LR+T + G PGETE DF+ LL F+++ R +R+G F YS G + D +PE Sbjct: 285 PGIHLRTTLMTGHPGETERDFEELLQFVRDIRFERLGAFTYSHESGTYCDKNYQDDIPES 344 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN- 413 VK+ER M +Q++ISA + K+G + V+ID ++ +GR+ D+PE+D V + Sbjct: 345 VKQERLGELMAVQERISAAHNEAKIGSRLRVVIDRAEDGFYVGRTEYDSPEVDPEVLIPF 404 Query: 414 -GETNVKPGDILRVKVEHADEYDLWGSRV 441 +KPG +V A+ +DL+ V Sbjct: 405 VSGQELKPGRFYMAEVTGAEPFDLYARIV 433 >UniRef50_D1C3B2 MiaB-like tRNA modifying enzyme n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3B2_SPHTD Length = 449 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 113/444 (25%), Positives = 189/444 (42%), Gaps = 18/444 (4%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 V +P+ +LGC N D + LR G V +A++ IVNTC A + Sbjct: 13 HVRRRPRFAICTLGCKLNQSDEADLRRSLRQAGLQEVDFGSEAEVYIVNTCTVTQLADRR 72 Query: 63 SLEAIGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S + + A +N + +V GC A P+V + G V V + + Sbjct: 73 SRQMLRRAHRQNPEALVAAIGCYPAVNPDELHAMPEVDIVVGSIEKATV---VDEILGRL 129 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 E + R +KI EGC CT+CIIP RG + EV+ + Sbjct: 130 DWENQAFDSDEPVEHVETRTRRMIKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRRVQE 189 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHYV 238 +D G +E+++ Y RT + L E + + R+ V Sbjct: 190 AIDEGYREVVLTGTHVGTYKWPEGDRT---------LRLADLLELVLEATTIERLRVTSV 240 Query: 239 YPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P+ + I L+ ++ P+L + LQ S +L+ MKR + + +++ RE P++ Sbjct: 241 GPHEIDERFIALVNHPRMAPHLHMALQSGSETVLRRMKRWYNTRQFRRAVRRLREEVPDI 300 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFPGET+E+F DF++E ++ F +SP + A A+PDQV VKE Sbjct: 301 AITTDVIVGFPGETDEEFAETCDFVREMGFAKLHVFPFSPRKDTPAAAMPDQVHPRVKER 360 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS-MADAPEIDGAVYLNGET- 416 R + ++ A + +GRE+ V++++V E+ GRS + VY+ G+ Sbjct: 361 RAAELRAIGDELHAAFVARHLGREVRVLVEQVAEQLPDGRSLWSGYTGNYLRVYVPGDPG 420 Query: 417 NVKPGDILRVKVEHADEYDLWGSR 440 + V+ E + Sbjct: 421 EDLENRFVSVRAVAPHEDGVLADP 444 >UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC80_9ACTN Length = 449 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 147/451 (32%), Positives = 227/451 (50%), Gaps = 17/451 (3%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 TP + +++LGC KN VD++R+ + L GY+ DAD+ IVNTC F+ SA ES Sbjct: 2 DTPLGSVLYITLGCAKNEVDTDRMRSLLTAAGYEEAFDPQDADIAIVNTCSFLASATSES 61 Query: 64 LEAIGEALNENG------KVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY 116 +E E NE +++ GC+ ++ D + + P+V + ++ + Sbjct: 62 IETTLELANEVQDGVRSCPIVMCGCVPSRYGDDLPDELPEVAAFVKADEEDGIVAVIDGV 121 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + + Q + AY+KIS+GCN C+FC+IP +RG SR ++S Sbjct: 122 LGVEREIAAYIP---QVKRTVEGAVAYVKISDGCNRFCSFCMIPYIRGRYHSRNSESIIS 178 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKT-SMVSLCEQLSKLGIWTRL 235 E + LV GV+EI++I QDT +G D + ++ E + +W R+ Sbjct: 179 EVRDLVAGGVREIVLIGQDTGIWGTDFADEDVADGSPRNLAQLLRAVAEAVRPHNVWVRV 238 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 Y+ P D++I + + ++LPY+DIP+QH RILK M+R GS + RE Sbjct: 239 LYLQPEGMTDELIDTIRDTPEVLPYIDIPVQHCDARILKAMRRSGSRQELEDLFRDLRER 298 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 P + +RST +VGFP ET+++F+ L+DF+ D F YS EG+ A + QV EE Sbjct: 299 IPGIVIRSTAMVGFPTETDDEFRDLIDFMDTVGFDYTSVFAYSREEGSLAAKMEGQVDEE 358 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE----GAIGRSMADAPEIDGAV 410 VK ER M L + + VG VI+D ++E IG + AP+ DGAV Sbjct: 359 VKLERAQEAMDLAESLGFAATAAHVGERAQVIVDGIEETEDGAELIGHAWFQAPDSDGAV 418 Query: 411 YLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 +L+ GDIL V+ + Y+L G V Sbjct: 419 HLDASE-ASVGDILTVEFTDSFCYELIGHVV 448 >UniRef50_C7MNG6 MiaB-like tRNA modifying enzyme YliG, TIGR01125 n=4 Tax=Coriobacteriaceae RepID=C7MNG6_CRYCD Length = 477 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 149/451 (33%), Positives = 238/451 (52%), Gaps = 25/451 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 + + P +++GC KN VDS ++ +L+ G+ V+ AD++IVNTC FI +A Sbjct: 37 VWGTSRIPNACIITMGCAKNEVDSAKMRGQLQEGGWSVINDPTAADVIIVNTCSFIQAAT 96 Query: 61 QESLEAIGEALNEN------GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHV 113 +ESLE I E + K++V GC+ A+ D + + + + +L V Sbjct: 97 EESLETIFEVADLKRVRSGQAKIVVAGCMPARYGDDLSDSLTEASRFVPCSKEDDILSVV 156 Query: 114 HHYVPKPKHNPFLSLVPEQGVKLTPRHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + +PK + V + Y AY+KIS+GC+ C++C IP +RG S Sbjct: 157 DELIDRPKSSYAPGASSIPVVASSDPLYSAYVKISDGCDRFCSYCTIPFIRGRYHSFTFE 216 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--G 230 + +E R +D+G +EI++I+QDT +G D +++ L +L++L Sbjct: 217 VIEAEVTRCIDSGAREIVLIAQDTGRWGQDFDQ----------PSTLACLMARLAELHPD 266 Query: 231 IWTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 W R+ Y+ P D+++ MA I YLDIP QHA R+L M R GS I+ Sbjct: 267 TWFRVMYLQPEGVTDELLAAMASHDNICSYLDIPFQHADERLLTSMNRRGSRAGYQTLIE 326 Query: 290 QWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD 349 R P +TLR+T I G+PGE +EDF+ +L+F+ EA LD VG F YS EG A L D Sbjct: 327 HVRSCVPGITLRTTMIAGYPGERDEDFEEMLEFIDEADLDYVGVFAYSQEEGTRAARLSD 386 Query: 350 QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG-AIGRSMADAPEIDG 408 QV E +K+ER R + S R+ +++G + V++ +E+G IGR+ AP++DG Sbjct: 387 QVDEAIKQERAQRLRDVADAHSQMRVAKRIGSTMDVLVLGCEEDGRLIGRAQCQAPDVDG 446 Query: 409 AVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 VYL+ + + G+I++V + Y++ G Sbjct: 447 VVYLD---HGQVGEIVQVDITDTFLYEMEGE 474 >UniRef50_Q0AWM7 MiaB-like tRNA modifying enzyme n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWM7_SYNWW Length = 456 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 110/450 (24%), Positives = 198/450 (44%), Gaps = 28/450 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F +LGC N V++E++ + GY +V + AD+ IVNTC S+ ++S Sbjct: 1 MKKVAFHTLGCKVNQVETEQLKEKFIQRGYQLVDFNESADLYIVNTCTVTHSSDRKSRAM 60 Query: 67 IGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 + A N V+ TGCL + P + I G E +LE + V + Sbjct: 61 LRRAARRNPGAMVVATGCLAQVDAAQLAAIPGLNLIVGSQQKEAILELIEGQVSSRSESE 120 Query: 125 FL----------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 L L P K R A++KI +GC C++CI+P RG S+ +V Sbjct: 121 PLIVCPPLVAGKKLPPVIYSKRHERSRAFVKIQDGCQSYCSYCIVPFARGPSRSKLPEDV 180 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 +E ++LVD G EI++ T YG D++ + ++ L + R Sbjct: 181 AAELQQLVDLGYHEIVLTGIHTGLYGNDLED--------WNLSRLLRLLFARVEGNYRIR 232 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L + P ++++ + A ++ + IPLQ S RIL+ M R + ++ + Sbjct: 233 LSSLEPVEIDEELLEMAAGGERLCRHFHIPLQSGSSRILRAMNRRYDREFYYKLVQHIVQ 292 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPE 353 + + +VGFPGE ++D+Q L L++ + + FKYS G A + QV + Sbjct: 293 RVKGAAVTADVMVGFPGEEKKDYQDTLALLQDLPVLDLHVFKYSKRPGTAAAKMEPQVSD 352 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 KE R +QL + + +++G+E+ V+++++ E S + + + Sbjct: 353 REKEMRSAELIQLAEAKKRSFINQQLGQELEVLVEQIVGED----SFRGLSDNYLELEFS 408 Query: 414 GETNV---KPGDILRVKVEHADEYDLWGSR 440 + G+++ V++E + G Sbjct: 409 SPRELIDELTGELIMVELEAMENSIARGRL 438 >UniRef50_Q96SZ6 CDK5 regulatory subunit-associated protein 1 n=33 Tax=Eukaryota RepID=CK5P1_HUMAN Length = 601 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 113/492 (22%), Positives = 207/492 (42%), Gaps = 60/492 (12%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 Q K+ + GC N+ D+E + L+ GY + +AD++++ TC + A Q Sbjct: 99 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNR 158 Query: 67 IGEALNENGK---------VIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 + + + + + GC+ + +++I V + GP +Y + + Sbjct: 159 LHQLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVA 218 Query: 117 VPKPKHNPFLSLVPEQGVKLTP------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + L + E + P A++ I GC++ C++CI+P RG SRP Sbjct: 219 ESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRP 278 Query: 171 IGEVLSEAKRLVDA--------------GVKEILVISQDTSAYGVDV------------- 203 I +L E K+L + G+KE+ ++ Q+ +++ + Sbjct: 279 IASILEEVKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLS 338 Query: 204 KHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYL 260 + T + + L +Q+S++ R+ + P+P D+V+ L+ E I + Sbjct: 339 RGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQI 398 Query: 261 DIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLL 320 +P Q S R+L+ M+R S + + + RE P ++L S FI GF GETEED + Sbjct: 399 HLPAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTV 458 Query: 321 DFLKEARLDRVGCFKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKV 379 L+E + + F YS + A L D VPEEVK R + + ++ + + Q V Sbjct: 459 SLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSV 518 Query: 380 GREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGET-----------NVKPGDILRVKV 428 G LV+++ + + A + + + V +PGD + VK+ Sbjct: 519 GCTQLVLVEGLSKRSAT--DLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQPGDYVLVKI 576 Query: 429 EHADEYDLWGSR 440 A L G Sbjct: 577 TSASSQTLRGHV 588 >UniRef50_B0PFX8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0PFX8_9FIRM Length = 441 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 109/443 (24%), Positives = 183/443 (41%), Gaps = 26/443 (5%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K F +LGC N +++ + + GY++VP AD+ +VN+C S Q++ + Sbjct: 1 MKAAFYTLGCKVNQYEAQILAQQFADAGYEIVPPEAPADVYVVNSCTVTASGDQKTRRVL 60 Query: 68 GEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 + V++TGC + I G ++E V Sbjct: 61 RRFRTLCPDATVVLTGCYPQAFPDDAARLAEADVIAGARDRAALVELVRRARETRGRIVA 120 Query: 126 L-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + P + R A++KI +GC+ C +CIIP RG + S+P GE+ +E Sbjct: 121 VAPHERGEPFEPMRAAAFRERTRAFVKIEDGCDRYCAYCIIPQARGPVRSKPPGELRAEL 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 + L AG +E +++ + +YG ++ R V L + + RL + Sbjct: 181 EGLARAGYREAVLVGINLPSYGRELGLRLIDA---------VELACAVGGIE-RVRLGSL 230 Query: 239 YPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P DD I MA K+ P + LQ L M+R + ++ R Sbjct: 231 EPELLTDDDIARMARQPKLCPQFHLSLQSGCDATLARMRRHYDTAEYMRIVRALRAHFEN 290 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + +VGFPGET+ +F L F++ L + F YS G A +P Q+P VKE Sbjct: 291 CAITTDVMVGFPGETDAEFGQSLCFVESLGLAKAHVFAYSRRPGTRAADMPGQLPGAVKE 350 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 R R ++ + A L + GR + V+ + D G + P V + + + Sbjct: 351 ARSARMIEATDRTRAAFLAGQAGRTVGVLFETRDGGAFDGYAENYTP-----VRVFTDED 405 Query: 418 VKPGDILRVKVEHADEYDLWGSR 440 ++ G I RV + AD G+ Sbjct: 406 LR-GQIRRVLITSADGARCVGTL 427 >UniRef50_B8E0G0 MiaB-like tRNA modifying enzyme n=2 Tax=Dictyoglomus RepID=B8E0G0_DICTD Length = 417 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 108/440 (24%), Positives = 188/440 (42%), Gaps = 38/440 (8%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ F + GC N ++E + R G+++VP +AD++ +N+C A +++ Sbjct: 1 MRKVAFYTFGCKVNQYETENLKILARNAGFEIVPFGKEADLIFINSCAVTHVAERKARRL 60 Query: 67 IGEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I N N K+ + GC + + E + + + Sbjct: 61 INLIKNRFPNAKIALAGCYAERLNLSSEKL-VLDFVLDNKQKWEF--------------- 104 Query: 125 FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDA 184 F V R A LKI +GCN+ CT+CI+P +RG S+P +V+ EA++LV+ Sbjct: 105 FGGSEDSAFVTSEDRARAILKIQDGCNNFCTYCIVPYLRGRERSKPFDKVMEEAQKLVEN 164 Query: 185 GVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYP 242 G KEI++ AYG D+ K ++ L +L ++ RL + P Sbjct: 165 GFKEIVLTGIRLGAYGRDLGD----------KDALSKLLLKLFEMDGLVKIRLSSIEPMD 214 Query: 243 HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 + +I L K+ + IPLQ ILK M R + + RE P++ + + Sbjct: 215 ITEGLIKLADHPKLCKHWHIPLQSGDDEILKKMNRRYDTKYFEQIVYKLREKVPDVAITT 274 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVG+P E+EE+F F + R+ F YSP A L +P EV +R + Sbjct: 275 DIIVGYPEESEENFNNTYLFAERMGFMRIHVFPYSPRPFTPAYKLKP-LPYEVITKRKEK 333 Query: 363 FMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGD 422 ++L + + + + +E+ V+++E E G + V +K G+ Sbjct: 334 LIKLSNDLWERYVSKFIEKELEVMVEERKENLYRGTTDNYI-----KVEFESNLLLKEGE 388 Query: 423 ILRVKV--EHADEYDLWGSR 440 ++V++ E +WG Sbjct: 389 YIKVRLLKVDNKEEKVWGEV 408 >UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY00_ACIFD Length = 487 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 122/471 (25%), Positives = 196/471 (41%), Gaps = 43/471 (9%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--- 68 + GC N DSERI L G DA +V+ NTC +A + + Sbjct: 7 VRTFGCQMNEHDSERIAGVLEGLGLTRGDDPADASVVVFNTCTIRANADERFFGQVNQLR 66 Query: 69 --EALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 N + +++V GCL E + E P V I G H ++ E + Sbjct: 67 EARRRNPSMRIVVAGCLAQGEGAGLLERAPHVDVIVGTHQVGRLAELLGAADGAEAVVDV 126 Query: 126 LSLVPEQGVKLTPRH----------YAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 P P A++ I GC++RC FCI+P +RG SRP ++ Sbjct: 127 REPEPGSVGLDDPTPWGEAVSEEPWRAWVTIQVGCDNRCAFCIVPRVRGPEASRPFDAIV 186 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDV--------------------KHRTGFHNGEPV 215 +E + L GV E+ ++ Q+ ++YG D+ V Sbjct: 187 AEVRELAARGVSEVTLLGQNVNSYGRDLVLAMRRAEDERERAQVASRSGVAFLGQGVPRV 246 Query: 216 KTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRIL 272 + L + + R+ + P+P + MAE + L PLQ S RIL Sbjct: 247 RPLFADLVRAVGAVPGIRRVRFTSPHPKDMRTETFQAMAETPTVCESLHFPLQSGSDRIL 306 Query: 273 KLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVG 332 M R S DR LA++ + R +L + + IVGFPGET+ DF+ L+ EA D Sbjct: 307 AAMHRGYSADRFLAKLAEARATIDDLAVSTDIIVGFPGETDADFEATLEVAAEAAFDLAY 366 Query: 333 CFKYSPVEGADANALPDQ-VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD 391 F YSP G +A AL D+ V +V ER++R +++ ++ +A + +VGR+ ++I+ Sbjct: 367 TFIYSPRPGTEAAALVDRFVDPDVVHERFDRLVRVTERSAAAAHRARVGRDEEILIEGPS 426 Query: 392 EEGAIGRSMADAPEIDGAVYLNG-ETNVKPGDILRVKVEHADEYDLWGSRV 441 + R+ V++ G + G R ++ A + L G + Sbjct: 427 RKDP--RTATARTRQHKLVHIPGLDARALGGRYGRARIVDARAHYLIGEII 475 >UniRef50_D1U9N9 MiaB-like tRNA modifying enzyme YliG n=3 Tax=Desulfovibrio RepID=D1U9N9_9DELT Length = 443 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 162/457 (35%), Positives = 236/457 (51%), Gaps = 35/457 (7%) Query: 1 MSKVT-PQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 M+ + P K+ VSLGCPKNLVD+ER+L L + AD+ ++NTCGFI A Sbjct: 1 MAHHSVPAVKVFTVSLGCPKNLVDTERLLGALGPA-MLPADTVAQADLALINTCGFIQPA 59 Query: 60 VQESLEAIGEALN----------ENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQ 108 V+ES+ AI +A+ V V GCL ++ +RE P+V Sbjct: 60 VEESVAAILDAVRDADETRESTGRRPLVAVAGCLVSRYGQDLREELPEVDLWLSTDQLHL 119 Query: 109 VLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS 168 + + + P T YAYLKISEGC+H C FC IPS+RG S Sbjct: 120 WPVMIAQAITHARPIP-----NAPRRLSTGPAYAYLKISEGCSHNCHFCTIPSIRGPHRS 174 Query: 169 RPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSK 228 RP+ +L EA+ L + V EI+++ QD+++YG D+ + + L Sbjct: 175 RPVEALLDEARTLAAS-VPEIIIVGQDSTSYGSDLGGDNTIKHLVSGLADLPGL------ 227 Query: 229 LGIWTRLHYVYPYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W RL Y+YP DD++ + +LPY DIPLQHA P +L M RP + + Sbjct: 228 --AWLRLMYLYPAGLTDDLLGFLKSIGDPLLPYFDIPLQHAHPDVLASMGRPFARNP-RK 284 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 I + R + LR+TFIVG+PGET+E F L+ F++E R +G F Y P +G A A Sbjct: 285 VIDRVRAHFSDAALRTTFIVGYPGETDEHFDHLMRFVEETRFHHLGVFPYWPEDGTPAAA 344 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADA 403 LPD V ++ K +R + M LQ IS E ++ VG+ + V+I+ E GR+ A Sbjct: 345 LPDPVDDQTKLDRRDALMALQADISREIMESHVGQTLPVLIEAPSPEWPGLFTGRTWFQA 404 Query: 404 PEIDGAVYLNGETN--VKPGDILRVKVEHADEYDLWG 438 PE+DG Y++ + + PG I+ ++++ AD YDL G Sbjct: 405 PEVDGTTYVSTPPDTTLTPGTIVTIEIDKADTYDLSG 441 >UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8D6_GEMAT Length = 451 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 117/438 (26%), Positives = 207/438 (47%), Gaps = 30/438 (6%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 +T +P + + GC N+ DSE + +L GY+ V + D AD+++VNTC ++A Sbjct: 1 MTKKPTVYIETYGCQMNVADSELMYGKLVAHGYEPVDAPDGADVILVNTCAIRENAETRV 60 Query: 64 LEAIGEAL---NENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 + +GE + V VTGC+ + ++ E V + GP Y + + Sbjct: 61 IGRLGELRRYMKPDTIVGVTGCMAQRLGPRVLEQARHVSLVVGPDGYRALPALLDGARRG 120 Query: 120 PKHNPFLSLVPEQGVKLTPRHY----AYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 K + E + R + A++ + GC++RCT+CI+P RG SR + +V+ Sbjct: 121 EKFTATDFDLEEHYEDVVARRFEGVKAWIPVQRGCDYRCTYCIVPFTRGPERSRKLDDVV 180 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRL 235 E +++V+ G+ E++++ Q ++Y L + + R+ Sbjct: 181 REVQQVVEQGLSEVVLLGQTVNSY-------------TDGTHDFADLLRAVGAVDGIRRV 227 Query: 236 HYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 Y P+P D VI MA + ++ +P+Q S +LK M R S + L + + R Sbjct: 228 RYTSPHPNDFSDRVIDAMASVATVCEHIHLPMQSGSTSMLKRMLRRYSREEYLDCVARMR 287 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ-- 350 P L+L + IVGFPGET+ +F+ L +E R D FK+SP EG A +P Sbjct: 288 AAIPGLSLTTDIIVGFPGETDAEFEDTLSLCQEVRFDDAFMFKFSPREGTPATRMPADWT 347 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAV 410 +P++V R++R ++ + IS E +++G + V+I+++ + G V Sbjct: 348 IPDDVMAARFDRLVKTVRGISRENNLKRLGDTVEVLIEKLARD---GELWQARSRDFKTV 404 Query: 411 YLNGETNVKPGDILRVKV 428 + + K GD LRV++ Sbjct: 405 MVPADAG-KIGDYLRVQL 421 >UniRef50_B3EPX5 Ribosomal protein S12 methylthiotransferase rimO n=11 Tax=Chlorobiaceae RepID=RIMO_CHLPB Length = 442 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 161/449 (35%), Positives = 237/449 (52%), Gaps = 28/449 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 +T I +SLGC KN VDSER++ + R +G D+AD+VI+NTCGFI A Sbjct: 7 ETMTRNRSIFLLSLGCSKNTVDSERLIGQARRKGLSFTNEPDEADIVIINTCGFIADAKT 66 Query: 62 ESLEAIGEALNENG-----KVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ I A + + V GCL A ++R P+V G ++L + Sbjct: 67 ESIDEILAAAEKRKNGEIEALYVMGCLSALYAAELRAELPEVDRFFGTADLPEILNILG- 125 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 + + L+P HYA+LK+SEGC+ C+FC IP MRG S + ++L Sbjct: 126 -------TAYDPATRFERSLLSPSHYAWLKLSEGCSRTCSFCAIPKMRGRYKSESMEDLL 178 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-WTR 234 EA RL GVKE+ +I+QD + YG+D+ + + L +LS L W R Sbjct: 179 QEATRLKAKGVKELNLIAQDITPYGLDLYGTS----------RLNDLMRELSDLNFDWIR 228 Query: 235 LHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 L Y YP +VI M E I YLD+P+QH RIL MKR + ++ R+ Sbjct: 229 LLYAYPLDFPLEVIDTMRERENICDYLDMPVQHICDRILASMKRGIDKQGTIGLLESIRK 288 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA-LPDQVP 352 P + LR+T IVG+PGET +F+ LL F++E R DR+GCF YS E A L D +P Sbjct: 289 RNPNIRLRTTMIVGYPGETRAEFEELLQFVREFRFDRLGCFPYSHEEHTAAYDNLEDDIP 348 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 EE K+ER M+LQ+ IS ++ + + + V+++EV++ A R+ DAPE+D L Sbjct: 349 EEEKQERVGELMELQEGISEKKNRALEEKALKVLVEEVEDNLAFARTEYDAPEVDNECVL 408 Query: 413 NGET-NVKPGDILRVKVEHADEYDLWGSR 440 + +++PGD +E + Y+L G Sbjct: 409 DTAGIDIRPGDFCMATIEESSAYELVGRI 437 >UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S9_9BACT Length = 437 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 150/449 (33%), Positives = 251/449 (55%), Gaps = 23/449 (5%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M ++ + ++LGC KNLVD+E +L + G + +DA++++VNTCGFID + Sbjct: 1 MKMISKSKTVALINLGCTKNLVDAEEMLGRIAANGSTICQYPEDAEVLVVNTCGFIDDSK 60 Query: 61 QESLEAIGEALNEN-----GKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVH 114 +ES++ I + K+IVTGCL + +++ P++ ++ G +E++ Sbjct: 61 KESIDMIFKMAKLKENAQCKKLIVTGCLAQRYSAELKSEIPEIDDVVGLKDFEKITHLTG 120 Query: 115 HYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 + ++LTP+HY+YL+IS+GC++RCT+C IP +RG+ +SR I + Sbjct: 121 KRQMDNSTI-YQGDDWRNRIRLTPKHYSYLRISDGCDNRCTYCAIPGIRGNFMSRSIENI 179 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--W 232 L E++++ GVKEI +ISQDT++YG+D+ K + L E+++ + W Sbjct: 180 LEESRQMASEGVKEINIISQDTTSYGLDIYG----------KQMLHVLLEKIAAIEGIQW 229 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 RL Y +P ++I + E I Y+D+P+QH + IL M R + I Sbjct: 230 IRLLYTHPGHFYPELINTINEHETICKYIDLPIQHINDTILGKMGRNTTRKSIETLINNL 289 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R + LR++ IVGFPGET+E +Q LL+F+K+ + +R+G F YS E A QV Sbjct: 290 RRSIRSIVLRTSVIVGFPGETDEQYQELLEFIKKTKFERLGVFAYSKEENTPAAKFKKQV 349 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGA 409 ++VK+ER N M Q++I E + +G++ VI+DE + IGR+ DAPE+DG Sbjct: 350 GKKVKQERLNEIMLAQREIVWENNKNLIGKKASVIVDEKEVVSGMLIGRTSGDAPEVDGK 409 Query: 410 VYLNGETNVKPGDILRVKVEHADEYDLWG 438 V++N + +K G+I + + + + YDL Sbjct: 410 VFIN-DKQIKVGEIRELVISNVNGYDLVA 437 >UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Cystobacterineae RepID=MIAB_ANASK Length = 464 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 114/453 (25%), Positives = 198/453 (43%), Gaps = 36/453 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ + GC N DS+R++ L Y S D+AD++++NTC + A Q+ L A+ Sbjct: 27 RKVYVHTFGCQMNESDSDRMVELLGRHAYARAASADEADLILLNTCAVREKAEQKLLSAL 86 Query: 68 GEAL----NENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKP-- 120 G + V+GC+ +E + P V + GP + ++ E V + Sbjct: 87 GRYREVKARRGALIAVSGCVAQQEKDRLLARVPYVDFVFGPDNIGRLPEMVERARDERFA 146 Query: 121 ----KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + R A++ +GC++ C FCI+P RG VSRP +V++ Sbjct: 147 ETGWMDSEEYVFPRADPEAARGRVTAFVTAMKGCDNVCAFCIVPHTRGREVSRPFPDVVA 206 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTR 234 E L GV+E+ +I Q+ ++Y + L +++ + R Sbjct: 207 ECAALAGVGVREVTLIGQNVNSY--------------TGGCTFADLLRRVAAVPGIDRIR 252 Query: 235 LHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRE 293 +P+ D ++ + E K++P+ +P+Q S +L+ M+R SV L R + R Sbjct: 253 FTTSHPHDLSDALVEVFRDEPKVMPHFHLPVQSGSDAVLRRMRRDYSVAEYLDRFDRLRA 312 Query: 294 ICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPD---- 349 P + + + FIVGFPGET+ DF+ L L+ AR ++ F +SP A Sbjct: 313 ARPGIAITTDFIVGFPGETDADFEASLALLERARFEQSFSFVFSPRPHTVAAVRLGSAPE 372 Query: 350 --QVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 VP E R R + Q++I+ E L ++G+ + V+++ +E G + PE Sbjct: 373 WRDVPREAAVARLERLLAAQRRIAGEILAGELGKVVEVLVEGPSDEP--GERLGRTPENR 430 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 E G + V++ A L G+ Sbjct: 431 VVHLAADEAAAPAGARVAVRITRAGGSSLSGTL 463 >UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=Parachlamydiaceae RepID=Q6MAB2_PARUW Length = 434 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 194/448 (43%), Gaps = 32/448 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M T K ++LGC N +S+ +L GY + AD+ IVNTC +SA Sbjct: 1 MENETN--KFKIITLGCRTNQYESQAYQNQLLRMGYQEAKEGEKADICIVNTCTVTESAD 58 Query: 61 QESLEAIGEALNENG--KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 S AI + EN +++V GC ++ ++ + V + EQ+L + Sbjct: 59 SSSRHAIRQLARENQGTQLLVAGCFAERQPEVIQKIDGVTHVIPNREKEQLLARLF---- 114 Query: 119 KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 P +L + A++K+ +GCN CT+CIIP +RG SR + EVL EA Sbjct: 115 -----PKENLPEFSITQFDSHTRAFIKVQDGCNSFCTYCIIPYVRGRSRSRSVEEVLEEA 169 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 K L+ G KEI++ + + G + L + +L RL Sbjct: 170 KALISNGYKEIVLTGINIGDF-------DGKVAKGETPVRLSELVRMVDQLPGLERLRLS 222 Query: 237 YVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P D++ + GK + I LQ S ILK M R + L I + + Sbjct: 223 SIDPDEVDDELSDAILNGKHTCHSMHIVLQSGSNVILKRMNRKYTRQIFLDTIDKLKAAH 282 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 + T + IVGFPGET+ DFQ ++ +K + +V F YS +N +P++V E+ Sbjct: 283 SDFTFTTDIIVGFPGETDLDFQDTIEVMKHVKFAKVHMFPYSDRPRTRSNLMPNKVSPEM 342 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE---EGAIGRSMADAPEIDGAVYL 412 R +++ +Q + + + + R + ++ + +DE G + E +V++ Sbjct: 343 IRMRKQEILRVAEQTAYKLREGYLNRRMKILTESIDEARPGEIHGHT-----ENFLSVWI 397 Query: 413 NGETNVKPGDILRVKVEHADEYDLWGSR 440 + ++ I+ V++ L G Sbjct: 398 Q-DEGIQSNKIVEVELVANTPAGLIGKP 424 >UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=MIAB_SORC5 Length = 498 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 117/465 (25%), Positives = 207/465 (44%), Gaps = 31/465 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 P+ + GC N+ DSER+ LR GY S D+AD++++NTC + A Q+ Sbjct: 1 MPRYSITTFGCQMNVHDSERMHDVLRCAGYTEAGSADEADVLVLNTCSVREKAEQKLRSE 60 Query: 67 IGEALNENG-----KVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHH----- 115 +G ++V GC+ +E + + + + + GP + ++ + Sbjct: 61 VGRLARWKRERADRVLVVAGCVAQQEGERLLKQMRAIDVVVGPDNIPELPGLLGDLAIGG 120 Query: 116 --------YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 + P+ P A++ + +GC+ RC+FCI+P RG Sbjct: 121 LPIARTVFDLDAPRFLVASPPSPSSSSSPRAAPTAFVTVMKGCDERCSFCIVPHTRGPER 180 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNG---EPVKTSMVSLCE 224 RP E+++E LV AG +E+ ++ Q ++Y + +P ++ +L Sbjct: 181 YRPSDEIVAEIAALVAAGTREVTLLGQTVNSYRDPLGALPRAPGASADDPDESEFAALLR 240 Query: 225 QLS-KLGIWTRLHYVYPYP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGS 280 +++ + RL Y P+P ++ AE + ++ +P+Q S R+L+ M R + Sbjct: 241 RVAADVPGLARLRYTSPHPRHLTPSLVLAHAELPVLPRHVHMPVQSGSDRVLRRMIRRYT 300 Query: 281 VDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVE 340 +AR + E P LTL + IVGFPGETE+DF L ++E + FKYS Sbjct: 301 RAEYVARTRALVEAVPGLTLSTDIIVGFPGETEDDFAATLSLVREVGFKGLFGFKYSRRP 360 Query: 341 GADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRS- 399 A LPD VPE VK ER R + + + A L VG V+++ D+E G + Sbjct: 361 HTPALKLPDDVPEGVKGERLARLFEESEALLAAHLSALVGTTQEVLVEGRDKERGHGGAG 420 Query: 400 ---MADAPEIDGAVYLNGETNV-KPGDILRVKVEHADEYDLWGSR 440 + +++G + G+++ V + A+++ L Sbjct: 421 GALWSGRTGRHEIAHIDGAGELDLLGEVVEVSIARANKHSLQAEL 465 >UniRef50_A4SAH0 Predicted protein n=3 Tax=Mamiellales RepID=A4SAH0_OSTLU Length = 579 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 106/492 (21%), Positives = 197/492 (40%), Gaps = 55/492 (11%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 + + + GC N+ DSE ++ L GYD +DAD++++NTC D A Sbjct: 61 EDARGRRAVYVETYGCQMNVNDSEVMMAVLEGAGYDETKEVNDADVILINTCAIRDKAEA 120 Query: 62 ESLEAI--------GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEH 112 + + + G+ +E V V GC+ + ++++ E + GP +Y + Sbjct: 121 KIWQRLAYFRSLGNGKKRSEKPVVGVLGCMAERIKEKLLEADRLADIVAGPDAYRDLPNL 180 Query: 113 VHHYVPKP-------KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGD 165 + V P + + + V+ H A++ I GC++ C FCI+P RG Sbjct: 181 IDAVVGNPGGKAMNVQLSVEETYADIIPVREAGSHSAFVTIMRGCDNACAFCIVPYTRGR 240 Query: 166 LVSRPIGEVLSEAKRLVDAGVKEILVISQDTS----------------AYGVDVKHRTGF 209 SR + ++ E + L + GVKE+ ++ Q+ + Y R Sbjct: 241 ERSRDLASIMYEIRLLSEQGVKEVTLLGQNLANASTERLASASGSAFVGYADGFASRYDP 300 Query: 210 HNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQH 266 L ++++ + R+ + P+P DDV+ ++ + + L +P Q Sbjct: 301 ERKRAGTIQFAELLDKVASVDPEMRIRFTSPHPKDFPDDVLRVIRDRPNVSKCLHMPAQS 360 Query: 267 ASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEA 326 S L+ M R + + A I + + + P + + I GF GETE+D + + + Sbjct: 361 GSSATLERMARGYTRESYFALIDRVKAMIPGCAITTDIISGFCGETEDDHEDTVSLMSAI 420 Query: 327 RLDRVGCFKYSPVEGADANALP-DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILV 385 ++ F YS EG D VPE+VK+ R + + +AE+ Q ++G V Sbjct: 421 GYEQAFMFAYSEREGTAGQRHQIDDVPEDVKQRRLQEVIDAFRARAAEKQQMEIGSTHCV 480 Query: 386 IIDEVDEEGAIGRSMADAPEIDGAVYLNGET-----------------NVKPGDILRVKV 428 +++ ++ + + V VKPGD + V+V Sbjct: 481 LVEGPSKKNSD--EWTGKTDTSKWVVFEKNDAIGKYAGDEDAPTSGSYGVKPGDYVAVRV 538 Query: 429 EHADEYDLWGSR 440 L+G Sbjct: 539 TGCSTGTLFGQV 550 >UniRef50_D0J9M2 RNA modification protein n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0J9M2_BLASP Length = 466 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 111/453 (24%), Positives = 199/453 (43%), Gaps = 29/453 (6%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI-- 67 S GC N+ D+E I++ L G+ + + A ++++NTC A + Sbjct: 15 YYIESYGCQMNISDTEIIISILSKNGFLLTNNLKKAHIILLNTCAIRKKAELSIKNRLEN 74 Query: 68 -GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVH----HYVPKPKH 122 + N K+ + G LG + + + GP+SY ++ + + + K K Sbjct: 75 LRYLKSNNQKIPLFGILGCLSKSEKYSNL-IDFSIGPNSYRKIPDIIRLVMMNDEKKIKP 133 Query: 123 NPFLSLVPEQGVKLTP-----RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 E ++P + +L I+ GC++ CTFCI+P RG S ++ E Sbjct: 134 ILLSENQNETYENISPSPSIKKITTFLSITRGCDNMCTFCIVPFTRGRERSSSPYSIIKE 193 Query: 178 AKRLVDAGVKEILVISQDTSAY---GVDVKHRTGFHNGEPVKTSMVSLCEQLS-KLG-IW 232 + L + G KE+ ++ Q+ +Y G +K + N L + L+ K+ + Sbjct: 194 CENLYEKGYKEVTLLGQNVDSYLWFGGGLKKQIKIDNNNEKIIDFSRLLDLLASKIPFMR 253 Query: 233 TRLHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R P+ D VI ++ I ++ +P+Q S +ILKLM R + ++ L+ I++ Sbjct: 254 IRFSTSNPHDMSDRVIEVISKHSNICKHIHLPVQSGSNKILKLMNRKYTREKYLSLIQKI 313 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADAN-ALPDQ 350 R I PE ++ I GF E EED + + + + D F YSP G A L D Sbjct: 314 RSIIPECSISHDIITGFCNEEEEDHLETISLMNKVKYDYGYMFSYSPRAGTYAYKKLKDN 373 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG---AIGRSMADAPEID 407 VPE +K++R + LQ+ S R+++ +G V+I+ ++ GR+ + Sbjct: 374 VPENIKKKRLKEIIDLQRIHSIFRMKKYLGTIQEVLIEGKSKKNNQDWYGRNTQN----- 428 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V + + K G+ + VK+ + L G Sbjct: 429 -IVVVFPKKLSKIGETVFVKITNCTSATLIGRI 460 >UniRef50_Q7VGP6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Campylobacterales RepID=MIAB_HELHP Length = 462 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 116/444 (26%), Positives = 202/444 (45%), Gaps = 19/444 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTE-GYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ +LGC N DS ++ ELR + Y + AD++++NTC + ++ Sbjct: 1 MKLFIQTLGCAMNERDSAHMIAELRDKKHYTLTNDIKQADLILINTCSVREKPEKKLFSE 60 Query: 67 IGEALNENG---KVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 IG E K+ V GC ++I + P V + G + ++ + + Sbjct: 61 IGAFAKEKKAGAKIGVCGCTASHLGEEIIKKAPSVDFVLGARNVSKITQVLERPKAVEVD 120 Query: 123 NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + A+L IS GC+ +C++CI+P RG +S P ++SEAK+ V Sbjct: 121 IDYDDSTYVFASSQGMGIKAHLNISIGCDKKCSYCIVPFTRGKEISVPKDLLISEAKKCV 180 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYP 242 +G KE+L++ Q+ + YGV H KT+ L LS++ R+ + P+P Sbjct: 181 ASGAKELLLLGQNVNNYGVRFSHS-------HPKTNFTQLLRALSEIDGLYRIRFTSPHP 233 Query: 243 --HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELT 299 D+ + A I + IPLQ S +ILK+M+R L RI + + + P + Sbjct: 234 LHMDDEFLEEFASNPVIAKGIHIPLQSGSSQILKMMRRGYDKQWYLNRIAKLKSLVPNVG 293 Query: 300 LRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ--VPEEVKE 357 + + IVGFP E+E+DF+ ++ L D + F YSP A V EV + Sbjct: 294 IGTDIIVGFPTESEQDFEDTMEVLSLVEFDTLYSFVYSPRPHTSAFEYDKSMLVSPEVAK 353 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER R L ++I +++ Q ++GR V+I+ G+ ++ + + Sbjct: 354 ERLARLQNLHKEILSKKAQLEIGRIHNVLIENHYNGE--GQCWSEGRSSSNKLIKILDKK 411 Query: 418 VKPGDILRVKVEHADEYDLWGSRV 441 + G I++V++ H + L G + Sbjct: 412 CEIGSIVKVEITHNEGGGLMGRFI 435 >UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=14 Tax=Desulfovibrionales RepID=MIAB_DESVH Length = 449 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 126/450 (28%), Positives = 193/450 (42%), Gaps = 28/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + GC N+ DS+ + L G+ P + A + IVNTC D Q+ + Sbjct: 4 RTFHIETFGCQMNVNDSDWLARALMERGFSPAPFGE-ARLTIVNTCSVRDKPEQKVYSLL 62 Query: 68 GEA-----LNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G + V V GC+ + P+V + G + + V +P Sbjct: 63 GRIRQATSKKPDAFVAVGGCVAQQIGSGFFSRFPQVRLVFGTDGLAMAPQALDRLVEEPD 122 Query: 122 HNP----FLSLVPEQGVKLTPRHYA---YLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 F PE+ L ++ I +GC++ C +CI+P RG SR G + Sbjct: 123 LKLSLLDFSEDYPERDAVLGQGAVPASVFVNIMQGCDNFCAYCIVPYTRGRQKSRATGTI 182 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTR 234 L E + L+D G +EI ++ Q+ +++G D T+ L +++ L R Sbjct: 183 LDECRALLDRGAREITLLGQNVNSFGQDSHG---------DGTTFAQLLHKVAALPGLER 233 Query: 235 LHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 L +V P+P +V+ + P L +PLQ S RILKLM R + R L + Sbjct: 234 LRFVTPHPKDIAPEVVEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDL 293 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P++ L S IVGFPGETEEDF +D L+ F YS G A LPD++ Sbjct: 294 RAARPDIVLSSDIIVGFPGETEEDFMETMDALETVGYAASYSFCYSDRPGTRAEMLPDKL 353 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE-GAIGRSMADAPEIDGAV 410 EVK ER R LQ +++ LQ+ VGR++ V+++ + + G G S V Sbjct: 354 SREVKLERLERLQTLQNRLTERCLQDMVGRKVEVLLEGMSRKPGDEGDSWQGRDPYGNLV 413 Query: 411 YLNGETNVKP-GDILRVKVEHADEYDLWGS 439 + G L V V A ++ L Sbjct: 414 NVALPQGSDVRGRFLPVVVAQAKKHSLLAE 443 >UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Chloroflexi (class) RepID=MIAB_ROSS1 Length = 476 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 115/445 (25%), Positives = 203/445 (45%), Gaps = 35/445 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + ++GC N+ DSER+ L+ GY +DA +++N+C SA + L + Sbjct: 26 RRYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEERILGKL 85 Query: 68 -----GEALNENGKVIVTGCLGAKEDQIR--EVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + + KV++ GC+ +Q P V P + ++VL P P Sbjct: 86 SEVQRLKRKHPDTKVVLWGCMVGPGNQSIFQSRLPMVDHFVSPSAVDEVLAL----APNP 141 Query: 121 KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 + +P P ++ I GCN C+FC+IP RG SRP+ E++ E +R Sbjct: 142 IYQLEEPALPVARWDH-PPVSVHVPIQYGCNMSCSFCVIPLRRGRERSRPLDEIVEECRR 200 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP 240 +V G KEI ++ Q ++G D+ R + L + + RL ++ Sbjct: 201 IVARGAKEITLLGQIVDSWGHDLPGRPD----------LADLLRAVHDIPGLLRLRFLTS 250 Query: 241 YP--HVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +P D +I +AE + +P +++P+Q +LK+M+R +V R I + R+ P+ Sbjct: 251 HPAWMTDRLIAAVAELPRCMPDINLPVQAGDDALLKIMRRGYTVQRYRDLIAKIRDAIPD 310 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ----VPE 353 ++L + IVG PGET E F+ L++ R D+V +S G A + VPE Sbjct: 311 VSLTTDVIVGHPGETRERFEGTKRLLEDIRFDKVHIAAFSSRPGTRAADMELDPTLAVPE 370 Query: 354 EVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413 K+ R +LQ+QI+AER + + + V+++ + GR+ + + Sbjct: 371 GEKQLRRIELERLQEQIAAERNARFLHQTVEVLVEGEHKGKWRGRTPGN------KLVFF 424 Query: 414 GETNVKPGDILRVKVEHADEYDLWG 438 + + G + RV + H + L G Sbjct: 425 SDPDDWTGRLARVIITHTGPWSLQG 449 >UniRef50_Q9UXX9 Putative methylthiotransferase PYRAB17290 n=9 Tax=Thermococcaceae RepID=Y1729_PYRAB Length = 425 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 117/446 (26%), Positives = 210/446 (47%), Gaps = 35/446 (7%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 KI + GC +N D E + L G+++V D+ ++V+VN+C D ++ Sbjct: 1 MVKIYIENYGCARNRADGEIMAALLHLAGHEIVYDPDEGEIVVVNSCAVKDPTERKIARR 60 Query: 67 IGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFL 126 I E L+ KVIVTGCL + + +V I G S +++++ V + + K Sbjct: 61 IKELLDSGKKVIVTGCLPHVNPDVIDE--RVSGILGVKSIDRIIQAVEYALRGEKLISVP 118 Query: 127 S-----LVPEQGVKLTPRHYAY-LKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR 180 L +L+PR + + I+EGC + CT+C RG L S +++ K Sbjct: 119 DWRKRNLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGWVKW 178 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 + G KEI + ++DT YG D+ T++ L ++++ + R+ + Sbjct: 179 AIKQGYKEIWLSAEDTGCYGFDIG------------TNLAKLLDEITAIEGEFRVRVGMM 226 Query: 239 YPYP---HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 P +D++I + KI +L +P+Q IL+ M R +V+ +K++R+ Sbjct: 227 NPNHVLKFLDELIEAYQDEKIYKFLHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKF 286 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P+L L + IVGFPGE +E FQ ++ ++ R D+V +YSP G A Q+P + Sbjct: 287 PDLNLHTDIIVGFPGEDDEAFQRSVELIRRIRPDKVNVSRYSPRPGTIAAKWK-QLPGWI 345 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI-GRSMADAPEIDGAVYLNG 414 +ER +++ QIS E Q+ +G+++ V+I ++G + +M V L Sbjct: 346 VKERSRLLHRIRLQISYEINQKYIGKKVEVLIHGEGKKGNVDAVTMNYK-----HVILPF 400 Query: 415 ETNVKPGDILRVKVEHADEYDLWGSR 440 + G+ ++++A L G Sbjct: 401 GNS---GEFRIAEIKNATSTYLLGEV 423 >UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZF9_ABIDE Length = 449 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 119/455 (26%), Positives = 206/455 (45%), Gaps = 35/455 (7%) Query: 11 GFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA 70 F++LGC N ++E I + GY++ + AD+ IVNTC + A ++S + + A Sbjct: 2 AFLTLGCKVNAYETESIKEMFKNNGYEIKQFNEVADIYIVNTCTVTNIADRKSRQMLHRA 61 Query: 71 L--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSL 128 N V+ GC E V + G VL V Y+ K F Sbjct: 62 KKLNPEAVVVAVGCYVQAPQSKLEDDDLVDILVGTRGKSSVLSLVEEYIRSNKTRDFKHN 121 Query: 129 VPEQGVKLTP-------------RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 V + G + ++ A +KI +GC+ CT+CIIP +RG + SR + ++ Sbjct: 122 VIKSGEENKDWAYDSGEVNAGGGKNRANIKIQDGCDQFCTYCIIPFVRGRIRSRDMEGIV 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WT 233 E RLV AG +E+++ +YG D+ ++ M+ L +L+K+ Sbjct: 182 EETDRLVKAGFREMVLTGIHIGSYGRDIDG----------ESRMLELLTELNKVEGDFRI 231 Query: 234 RLHYVYPYPHVDDVIP-LMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL V P ++ + L+ K+ P+ + LQ S +LK M R + L +K + Sbjct: 232 RLGSVEPRLITEEFLEGLVKLKKVCPHFHLSLQSGSTTVLKRMNRHYGAEEYLNSVKLLK 291 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + + + IVGFPGET+E+F+ + F+KE +V F YS +G A + +Q+ Sbjct: 292 KYYDRPGITTDIIVGFPGETDEEFEETVAFVKEVGFLKVHVFPYSKRDGTYAAKMNEQIA 351 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV---DEEGAIGRSMADAPEIDGA 409 E+K+ER N +++ +++S + L+ G V+++E E+ + S Sbjct: 352 PEIKKERENILIKVCEEVSEKYLESFNGDMEQVLLEEEIKGREDYVMAHSARYIEVAVPK 411 Query: 410 VYLNGETNVKPGDILRVK---VEHADEYDLWGSRV 441 + L+G N + L VK + + L G + Sbjct: 412 MILSGRENADK-EFLNVKGMMLSDTSDGALKGMMI 445 >UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=MIAB_UNCTG Length = 418 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 112/443 (25%), Positives = 198/443 (44%), Gaps = 34/443 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++GC N+ DS+ +++ G + +AD+VI+NTC A Q++ + Sbjct: 1 MNYLIETIGCQMNVCDSDMLVSIFSAYGASKANNLSEADVVILNTCSVRSQAEQKAFSYL 60 Query: 68 GE-----ALNENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G N K++V GC+ + I++ V I G + + Sbjct: 61 GRVKEFKQKNPCIKIVVIGCMAERLGPNIKKRFSSVDLIIGAKDIGNAALKIMNLFR--- 117 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + ++ + Y+ I GC++ C++C +P +RG VS +++E + Sbjct: 118 ---TDYSAKKVNSEIKSKIVRYITIMRGCDNYCSYCAVPFVRGREVSINCETIVNECSSM 174 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHYVY 239 V G +EI+++ Q+ ++Y + + SL ++ + + R + Sbjct: 175 VKNGAREIILLGQNVNSY-------------QYEDVNFASLIKKTAAIENLERIRFMTNH 221 Query: 240 PYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P DD+I +MA E K+ P++ IP+Q AS +ILK M R S + L IK+ R P++ Sbjct: 222 PKDLSDDLIKIMATEPKVCPHIHIPMQSASDKILKAMNRKYSYEHYLGLIKKLRTAVPDV 281 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 ++ + IVGFPGET+EDF+ L +K R + F+YSP A + D VP E K+ Sbjct: 282 SVTTDIIVGFPGETDEDFEDTLKAVKTIRFGGLYVFRYSPRPDTKAAEMIDDVPFEEKKR 341 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R ++ +IS E + E +G V+ +E+ R+ V+ G Sbjct: 342 RHAVVLKESNKISIEIVSEMLGSTQQVLAEEIKNGIIKARTKNGR-----KVFAEGRKEY 396 Query: 419 KPGDILRVKVEHADEYDLWGSRV 441 G + V ++ A L+G V Sbjct: 397 -IGKHINVNIKEAKINSLFGDIV 418 >UniRef50_D2L881 RNA modification enzyme, MiaB family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L881_9DELT Length = 446 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 112/450 (24%), Positives = 184/450 (40%), Gaps = 28/450 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K +++GC N+ D + + L+T G+ P ++ AD+ I+ TC + Q+ + Sbjct: 1 MKFHVITMGCQMNVGDGDWLTRSLQTTGFTPAPEHE-ADLFILFTCSVREKPEQKVASEL 59 Query: 68 GEAL-----NENGKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 G N N V V GC+ + + P V + G + +P Sbjct: 60 GRIADRHRDNPNACVAVGGCVAQQLGTSLWRRFPMVRLVFGTDGIAAAPRALARLAEEPG 119 Query: 122 HNP----FLSLVPEQGVKLTP---RHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEV 174 F PE+ A++ I +GC++ C +CI+P +RG SR V Sbjct: 120 LRLSLLDFTESYPERDQSWPEDRLPPRAFVSIMQGCDNYCAYCIVPFVRGRQKSRGAAAV 179 Query: 175 LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--W 232 + E + L + GV+E+ ++ Q+ ++YG+D TS L + ++ + Sbjct: 180 VEECRNLAERGVREVTLLGQNVNSYGLDASG---------DGTSFARLLDAVAAVPGIAR 230 Query: 233 TRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQW 291 R +P DDVI ++ P L +P+Q S RIL+ M R + + Sbjct: 231 IRFTTSHPKDLSDDVIERFGSLPQLCPALHLPVQSGSDRILRRMGRRYDTADYRRLVAKL 290 Query: 292 REICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQV 351 R P+L L + IVGFPGETE DF+ LD ++E R + F Y G + L ++ Sbjct: 291 RRARPDLALTTDLIVGFPGETEADFKETLDLVREVRFESGFSFMYGDRPGTASERLEPKI 350 Query: 352 PEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVD-EEGAIGRSMADAPEIDGAV 410 E K R L L +VG ++I+ +GA G S V Sbjct: 351 APEAKAARLAELQTLLDAGLTASLAARVGTSAEILIEGPSRRDGAAGPSWRGRDPWGRIV 410 Query: 411 YLNGET-NVKPGDILRVKVEHADEYDLWGS 439 L G I+ ++ A ++ L G Sbjct: 411 NLPLPGHGDAAGTIVPARIVQAKKHSLIGE 440 >UniRef50_Q29AM2 GA19527 n=9 Tax=Bilateria RepID=Q29AM2_DROPS Length = 589 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 110/474 (23%), Positives = 206/474 (43%), Gaps = 41/474 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F GC N D+E + + L+ GY+ +DAD+V++ TC + A Q+ + Sbjct: 98 RKVHFEVYGCQMNTNDTEVVWSILKQHGYERCQELEDADLVMLVTCAVREGAEQKIWNRL 157 Query: 68 GEALNENGK---------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEH--VHH 115 K + + GC+ + + + + V I GP SY+ + V Sbjct: 158 RHLRAMKQKRGAKRQPLQLTLLGCMAERLKERLLDQEQCVDVIAGPDSYKDLPRLLAVSR 217 Query: 116 YVPKPKHNPFLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LSL + A++ I GC++ CT+CI+P RG SRP Sbjct: 218 HYGNSAINVLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRP 277 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS----------MV 220 + +++E + L GVKE+ ++ Q+ ++Y +T + P + Sbjct: 278 LASIVNEVRALQVQGVKEVTLLGQNVNSYRDKGAGQTSDTSLVPGFKTVYKPKTGGIPFS 337 Query: 221 SLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKR 277 L + +++ + R +P D+V+ ++ + + L +P Q + +L M+R Sbjct: 338 ELLQSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTEVLARMRR 397 Query: 278 PGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYS 337 + + L ++ REI P + L S FI GF GETE +F+ + + + + F YS Sbjct: 398 GYTREAYLELVEHIREILPTVGLSSDFICGFCGETEAEFEDTISLINTVQYNVAYLFAYS 457 Query: 338 PVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE--- 393 E A+ D VP VK R R +Q + + + + G++ L++I+ + Sbjct: 458 MREKTTAHRRYVDDVPVAVKTARLQRMVQAFRDGATQLHKNFEGKQQLILIEGKSKRSDA 517 Query: 394 GAIGRSMADAPEIDGAVYLNGET-------NVKPGDILRVKVEHADEYDLWGSR 440 GR+ A+ I A+ L +T ++ GD + +++ ++ L G+ Sbjct: 518 HWFGRNDANIKVIVPAMDLPTDTGDAARRRSIAVGDFVVAQIDESNSQVLKGTP 571 >UniRef50_A0LEL6 RNA modification enzyme, MiaB family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEL6_SYNFM Length = 440 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 104/446 (23%), Positives = 176/446 (39%), Gaps = 28/446 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE--SL 64 K+ +LGC N +S ++ L + V AD+ +V++C SA + L Sbjct: 3 SKKVAVETLGCKVNQYESSVMMESLMQANWQPVSFKGAADLYVVHSCAVTSSAAFQTRQL 62 Query: 65 EAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVH---------H 115 LN + V GC + I G + + Sbjct: 63 LRRARRLNPGALIAVVGCDAQLDHDRLAAGELATHILGTAEKFDIARWIEVPASFAAPCR 122 Query: 116 YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVL 175 V P LS T R AYLK+ +GCN C++C++P RG S P EVL Sbjct: 123 AVKGVNDIPRLSAQ-AVSCMHTGRTRAYLKVQDGCNAYCSYCVVPYTRGRSRSLPADEVL 181 Query: 176 SEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQL--SKLGIWT 233 S +R V+ G +E+++ +G D+ + L +++ S Sbjct: 182 SRLRRFVEVGYREVILTGIHLGQWGKDLTPT----------RDLAGLLDRIGDSDSPPRV 231 Query: 234 RLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWR 292 RL + P ++ ++ I P+ IPLQ +L M RP + + I++ R Sbjct: 232 RLSSLEPLEWSAGLLRRISTVPWICPHFHIPLQSGDDDVLAAMHRPYTALQYANLIRELR 291 Query: 293 EICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVP 352 + PE L + +VGFPGET+ F L ++E L + F +SP G A +P ++P Sbjct: 292 MLFPEAALGADVMVGFPGETQRRFLNTLHLVEELPLTYLHVFPFSPRPGTPAADMPGRIP 351 Query: 353 EEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYL 412 + ++R + + + + +GR + V+++ R V Sbjct: 352 GDETKKRARLLQDIGTRKRRQFSERFLGRSVEVLVESAAPRAGWLR---GTTANYLQVLF 408 Query: 413 NGETNVKPGDILRVKVEHADEYDLWG 438 V PG I+RV+V + + +L Sbjct: 409 PAGPPVLPGSIVRVQVVRSGDRELIA 434 >UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWT7_9FIRM Length = 423 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 165/445 (37%), Positives = 246/445 (55%), Gaps = 41/445 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTE--GYDVVPSYDDADMVIVNTCGFIDSAVQESLE 65 K+ SLGC KN VD+E++L EL + G V +A++ IVNTC FI A +ES++ Sbjct: 1 MKLYLESLGCDKNRVDAEKLLFELLQKYPGSSVTDEPSEAEIAIVNTCSFIGPAKEESIQ 60 Query: 66 AIGEALNENG-----KVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 I + K+IV GCL + +IR+ P++ EIT Y + L+H Sbjct: 61 CILDLAQYKETGKLEKLIVAGCLVERYKDEIRKELPEIDEITSVKDYVKRLDH------- 113 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 V+ ++ YLKI+EGC+ C++CIIP +RG S P VL EA+ Sbjct: 114 ----------QMARVESGEKYSRYLKIAEGCDKYCSYCIIPRLRGHYRSIPKELVLEEAR 163 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHY 237 LV G E+++++Q+T+ YG D+ K ++ L +LS++ W R+ Y Sbjct: 164 ALVSEGAGELILVAQETTLYGTDLYK----------KKALAELLAELSEIPNLQWIRILY 213 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 YP ++I M K+ YLD+P+QHAS RILK M R + +I R+ P Sbjct: 214 CYPEEIEPELIREMKRNPKVCHYLDLPIQHASDRILKRMNRRTRKEELKEKIALLRKEMP 273 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 ++ LR+T I GFPGETEEDFQ +LDF+ E R DR+G F YS EG A + DQ+PE++K Sbjct: 274 DIALRTTIITGFPGETEEDFQEVLDFISEMRFDRLGAFPYSQEEGTKAAEMEDQIPEKLK 333 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDGAVYLNG 414 +R ++ M+LQQ I+ + +E++GR++ V++ DEE + RS DAP++D +Y+ G Sbjct: 334 NQRLSQIMELQQNIAFRKAEEQIGRKLKVLVCGYDEEEQRVLCRSYMDAPDVDSYLYVFG 393 Query: 415 ETNVKPGDILRVKVEHADEYDLWGS 439 E + G L KV + YDL G Sbjct: 394 EKK-EVGSFLYAKVIDTEGYDLIGE 417 >UniRef50_D1AKP3 MiaB-like tRNA modifying enzyme n=17 Tax=Fusobacteriaceae RepID=D1AKP3_SEBTE Length = 430 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 117/446 (26%), Positives = 195/446 (43%), Gaps = 24/446 (5%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 ++ K+ F +LGC N ++E I + GY+ V D AD+ ++NTC A +++ Sbjct: 1 MSISKKVAFYTLGCKVNQYETEIIKKDFLENGYNEVEFEDRADVYVINTCTVTSIADKKN 60 Query: 64 LEAIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + + A N + VI TGC + + +V I G E+V + + + Sbjct: 61 KKMLRRAKKINPDSVVIATGCYAQTNVEDLKEIKEVDYIIGNVKKEEVYKIFSKKLSNYQ 120 Query: 122 HNPFLSLVPE---QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + + A++KI +GC C++C IP RG SR VL E Sbjct: 121 VDNIFDQKEYSSQKYAVSRDKARAFVKIQDGCTKFCSYCKIPYARGMSRSRQPESVLEEI 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLH 236 K L +AG KEI+V + S YG D F + E++ K+ R+ Sbjct: 181 KFLGEAGYKEIVVTGINLSEYGSDFGENINFDY----------ILEKILKIEEIDRVRVS 230 Query: 237 YVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 VYP + I L+ E K ++P+L + +Q +ILKLMKR + + +K+ +E Sbjct: 231 SVYPDTLSEKFISLLKENKKLMPHLHVSIQSLDDKILKLMKRNYRAEFVVELLKKVQEEV 290 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P+ + + I GFP E EE+F + +K+ F YS E A A ++ EV Sbjct: 291 PDSAITADIITGFPQEEEENFWNTFENMKKINFSDFHIFPYSDREKTAAAAFTGKIEPEV 350 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +L++ E ++ + V I+E+ A G + +V Sbjct: 351 KKERVKILEKLKKSKIKEFREKFLDTVQKVYIEEIKAGKAYGYTENYLRVEVNSV----- 405 Query: 416 TNVKPGDILRVKVEHADEYDLWGSRV 441 + K DI+ VK+ + L G + Sbjct: 406 -SHKVADIVEVKIMSSAGDLLKGEVI 430 >UniRef50_B4JIJ9 GH19109 n=4 Tax=cellular organisms RepID=B4JIJ9_DROGR Length = 647 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 108/476 (22%), Positives = 195/476 (40%), Gaps = 45/476 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++ F GC N D+E + + L GY AD+V++ TC D A Q+ + Sbjct: 158 RRVHFEVYGCQMNTNDTEVVWSILHENGYQRCEDVASADVVMLVTCAVRDGAEQKIWHRL 217 Query: 68 GEALNENGK---------VIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEH--VHH 115 + + + GC+ + + + E V I GP SY+ + V Sbjct: 218 RHLRALKERRGTRRHPLQLTLLGCMAERLKERLLEQEQCVDVIAGPDSYKDLPRLLAVAR 277 Query: 116 YVPKPKHNPFLSLVPE-----QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LSL + A++ I GC++ CT+CI+P RG SRP Sbjct: 278 HYGNSAINVLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRP 337 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAY-------------GVDVKHRTGFHNGEPVKT 217 + ++ E + L GVKE+ ++ Q+ ++Y G + + + Sbjct: 338 LDSIVREVRTLQQQGVKEVTLLGQNVNSYRDRSGENNQATTDGNMASGFSTVYKPKTGGL 397 Query: 218 SMVSLCEQLSKL--GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKL 274 L + +++ + R +P D+V+ ++ + + L +P Q + +L Sbjct: 398 PFAVLLQSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTAVLAR 457 Query: 275 MKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF 334 M+R + D L + R++ PE+ L S FI GF GETE +F+ + ++ R + F Sbjct: 458 MRRGYTRDAYLQLVTHIRQMLPEVGLSSDFICGFCGETEAEFEDTVTLIESVRYNVAFLF 517 Query: 335 KYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEE 393 YS E A+ D VP VK R R +Q + + + G++ L++I+ + Sbjct: 518 AYSMREKTTAHRRYVDDVPTAVKTARLQRMVQAFRAGATHLHKRFEGQQQLILIEGKSKR 577 Query: 394 ---GAIGRSMADAPEIDGAVYLN--------GETNVKPGDILRVKVEHADEYDLWG 438 GR+ A+ I A + N+ GD + ++ ++ L G Sbjct: 578 SDSHWFGRNDANIKVIVPAASIPTTADAGESSRRNIGVGDFVVARIVESNSQVLKG 633 >UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=51 Tax=Epsilonproteobacteria RepID=MIAB_HELAH Length = 439 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 208/441 (47%), Gaps = 15/441 (3%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K+ ++GC N DSE +L+EL Y AD++++NTC + ++ Sbjct: 1 MLKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKIADLILINTCSVREKPERKLFSE 60 Query: 67 IG---EALNENGKVIVTGCLG-AKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH 122 IG + N K+ V GC I + P V + G + ++ + +H Sbjct: 61 IGQFAKIKKPNAKIGVCGCTASHMGADILKKSPSVSFVLGARNVSKISQVIHKEKAVEVA 120 Query: 123 NPFLSLVP-EQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + + + + L IS GC+ +CT+CI+P RG +S P+ +L EA++L Sbjct: 121 IDYDESSYAFEFFEKKAEVRSLLNISIGCDKKCTYCIVPHTRGKEISIPMDLILKEAEKL 180 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPY 241 + G KE++++ Q+ + YGV E K + L ++LS++ R+ + P+ Sbjct: 181 ANNGTKELMLLGQNVNNYGVRFSS-------EHAKVNFSDLLDKLSEIPGIERIRFTSPH 233 Query: 242 P--HVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPEL 298 P D+ + A K+ + +PLQ S +LK+M+R + + L R+++ + + PE+ Sbjct: 234 PLHMNDEFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYNKEWFLNRVEKLKALVPEV 293 Query: 299 TLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEE 358 + + IVGFP E+++DF+ ++ L++ D + F YSP +A A ++VP EV Sbjct: 294 GISTDIIVGFPNESDKDFEDTMEVLEKVCFDTLYSFIYSPRPFTEAGAWKERVPLEVSSL 353 Query: 359 RWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNV 418 R R ++I E+ + +VG+ +V+++ E + + + + Sbjct: 354 RLERLQNRHKEILEEKARLEVGKTHVVLVENRHEVDGQIVGFEGRSDTGKFIEVTCKEKR 413 Query: 419 KPGDILRVKVEHADEYDLWGS 439 PG+++ V++ + L + Sbjct: 414 NPGELVEVEIISHVKGRLMAT 434 >UniRef50_Q1PXT1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXT1_9BACT Length = 447 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 101/454 (22%), Positives = 182/454 (40%), Gaps = 28/454 (6%) Query: 4 VTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQES 63 F++ GC N +++ + L +G+ + AD+ ++NTC ++ ++S Sbjct: 3 ANHSKTCAFITFGCKVNQYETQALRESLIAKGFMEISPEMAADVYVINTCTVTSASDEKS 62 Query: 64 LEAIGEALNENGK--VIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHH------ 115 I ++ K ++VTGC + + V + + E + Sbjct: 63 RNYIKRLKKKSPKSSIVVTGCYAESDAAAIKKIDGVSHVITKADESSLAEIIVGNDDPCI 122 Query: 116 --------YVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV 167 Y+ + S+ + A+LKI +GC+ C++CIIP +RG + Sbjct: 123 PQITSLPPYLLQNNTFQKDSIYRLNISRFHGHTRAFLKIEDGCDMYCSYCIIPYVRGAIK 182 Query: 168 SRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLS 227 SR ++ EAKRL+ G KEI++ AYG ++ + L Sbjct: 183 SRKWQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSDGISLVKILERLSEFSGL----- 237 Query: 228 KLGIWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 RL + +++ L+AE K I P+L IPLQ ILK M R + Sbjct: 238 ---GRIRLSSIEVNEITPELMHLIAERKTICPHLHIPLQSGDDLILKRMNRKYTAAYYQE 294 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + R + + +VGFPGETE FQ +DF +A R+ F +S +G A + Sbjct: 295 ILDTIRSNIKLPAITTDVMVGFPGETERHFQNTVDFCTKAGYSRMHIFPFSIRKGTPAAS 354 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEI 406 + + +R + +S ++ + V+++ E A + E Sbjct: 355 MQNHCASPSITQRKDLLKAHADTLSYAYKKQFLNHIGEVLVEW--ERDAKTNKLCGYTER 412 Query: 407 DGAVYLNGETNVKPGDILRVKVEHADEYDLWGSR 440 V +G +K I+ V++E + D++G Sbjct: 413 YIKVLFDGPDTLK-NSIVPVQIERIERSDVFGKL 445 >UniRef50_Q9WZT7 Putative methylthiotransferase TM_0830 n=6 Tax=Thermotogaceae RepID=Y830_THEMA Length = 434 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 105/440 (23%), Positives = 193/440 (43%), Gaps = 30/440 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + + GC N +SE + +L GY V+P + A IVN+C ++ Sbjct: 1 MKTVRIETFGCKVNQYESEYMAEQLEKAGYVVLPDGNAA-YYIVNSCAVTKEVEKKVKRL 59 Query: 67 IG--EALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH-- 122 I N+N K+I+TGC + P V + G + +++H++ K + Sbjct: 60 IKSIRNRNKNAKIILTGCFAQLSPDEAKNLP-VDMVLGIDEKKHIVDHINSLNGKQQVVV 118 Query: 123 -NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRG-DLVSRPIGEVLSEAKR 180 P + + R +Y+K+ +GC++ CT+C I RG + S+P+ E Sbjct: 119 SEPGRPVYEKVKGSFEDRTRSYIKVEDGCDNTCTYCAIRLARGTRIRSKPLEIFKEEFAE 178 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYV 238 +V G KEI++ + YG D+ +S+ L + + K+ RL + Sbjct: 179 MVMKGYKEIVITGVNLGKYGKDMG------------SSLAELLKVIEKVPGDYRVRLSSI 226 Query: 239 YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 D+++ ++ P+L I +Q S +LK M R + + + + R I P+ Sbjct: 227 NVEDVNDEIVKAFKRNPRLCPHLHISVQSGSDDVLKRMGRKYKISDFMRVVDKLRSIDPD 286 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 ++ + IVGFPGET+ DFQ L+ +++ RV F++SP G A+ + VPE K+ Sbjct: 287 FSITTDIIVGFPGETDADFQRTLELVEKVEFSRVHIFRFSPRPGTPASRMEGGVPESKKK 346 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER + + + +S + +G+E V+ + +G + + E G Sbjct: 347 ERLDVLKEKAKDVSIRYRKRIIGKERKVLAEWYVMKGVL----SGYDEYYVKHEFVGN-- 400 Query: 418 VKPGDILRVKVEHADEYDLW 437 + G+ V+V+ E + Sbjct: 401 -RVGEFHSVRVKSLSEEGVI 419 >UniRef50_B2A5M5 RNA modification enzyme, MiaB family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5M5_NATTJ Length = 451 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 115/448 (25%), Positives = 204/448 (45%), Gaps = 15/448 (3%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD-ADMVIVNTCGFIDSA 59 M ++LGCP N +S+ + L GY + DD AD+ I+N+C +A Sbjct: 1 MIIGEKNKSFKIITLGCPLNQSESDLMRARLHQAGYSETGTGDDTADIYIINSCTVTQNA 60 Query: 60 VQESLEAIGEAL--NENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHY 116 ++S + +A N + V + GC G + ++I+E P++ I G + E+ +E + Sbjct: 61 ARKSRKEARKAKKGNPDAWVCLVGCYGEMEYEEIKEKIPEIDLIIGTRNREKAIEKL--V 118 Query: 117 VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLS 176 + N F + + + +KI EGC+ C++CI+ RG SR ++ Sbjct: 119 GQELDLNQFHNFPQDNNEIRPDKIRPAIKIQEGCDQSCSYCIVTLARGRPKSREFRQIKQ 178 Query: 177 EAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLH 236 + K ++ G +EI++ + YG DVK ++ +VS L R+ Sbjct: 179 QVKSYLEEGYQEIILAGTNMGLYGKDVKGQSKHSYKFIDLPMLVSELATLPYDDYRIRIS 238 Query: 237 YVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 + P ++++ M E KI YL +PLQ S RILKLM R + D +++ + + Sbjct: 239 SLEPLEMTEELLYAMKEHDKICNYLYLPLQSGSDRILKLMNRKYTTDDFARIVEKAKTLL 298 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P + + + IVGFPGE EED + ++F++E +L ++ F YSP A + QV ++ Sbjct: 299 PGVGIMTDLIVGFPGEKEEDHKATMEFVEELKLSKLHVFPYSPRPKTLAASFNVQVRPDI 358 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE--EGAIGRSMADAPEIDGAVYLN 413 K R +L Q+++ QE + + V+ + E + +G E V Sbjct: 359 KRARTEEMKELGQKLARRFYQENLNTRLRVLYERNYETSDKILG---EGFSENYCLVRFE 415 Query: 414 GET---NVKPGDILRVKVEHADEYDLWG 438 + K G+ + V ++ L G Sbjct: 416 TKGTNLTNKKGEFVNVISHQNYDWGLMG 443 >UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bacterium Ellin514 RepID=B9XHC1_9BACT Length = 556 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 162/555 (29%), Positives = 266/555 (47%), Gaps = 117/555 (21%) Query: 2 SKVTPQP-KIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 S +P ++G +SLGC KNLVD+E +L L G ++ AD+VIVNTC FIDSA Sbjct: 4 SDTNKRPVRVGLISLGCAKNLVDAEIMLGSLMKGGVEITNDATQADVVIVNTCSFIDSAQ 63 Query: 61 QESLEAI------GEALNENGKVIVTGCLGAK-EDQIREVHPKVLEIT------------ 101 +ES++ I EA N +IV+GCL + +++ ++ P+V Sbjct: 64 EESVDTILQSEEVREANNRGQGLIVSGCLPQRFREELPKLLPEVDVFMGIDQVAQVTEIV 123 Query: 102 -----------------GPHSYEQVLEHVHHY---------------------------- 116 G +S ++E + Sbjct: 124 HKALDHRAEKLKNAKGKGQNSKTNIVEKIAELDKARAELKHEDEESLRGTEKFGKTKTVV 183 Query: 117 ------VPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + ++ +LTP+H+AY+KI+EGCNH C+FCIIP MRG SR Sbjct: 184 APAVPLMDVNARPVYIPDFETPRFRLTPKHFAYVKIAEGCNHPCSFCIIPRMRGSHRSRV 243 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVK------------TS 218 +++ EAK+L+ GVKE+ +ISQD++ YG+D++ + P K T+ Sbjct: 244 QADIVREAKQLIADGVKELNLISQDSTYYGLDLRPNHSRNIASPEKFNSAAKSLPADATT 303 Query: 219 MVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLM 275 + +L +L+ + W RL Y +P D++I +A+ K+ Y+D+PLQH +L+ M Sbjct: 304 LCTLLRELNAIPGDFWIRLLYTHPAHWTDELIQTIAKCKKVARYVDMPLQHIHENMLERM 363 Query: 276 KRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFK 335 +R S + I++ R P + +R+TFIVGFPGETE F+ LL+F+++ + +R+G F Sbjct: 364 RRETSEQYIVNLIQRIRAGIPGIAIRTTFIVGFPGETETYFKTLLNFIRDTKFERLGVFT 423 Query: 336 YSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV----- 390 YS +G A + Q+ +++K +R M Q +++ + + VG+E+ V+++ Sbjct: 424 YSKEDGTRAGNMEGQLADKIKSKRRELAMAEQLKVAKQVAESFVGKELRVLVEAEASAKE 483 Query: 391 ------------------------DEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRV 426 + RS ADAP+IDG VY+ G N+ G+ +V Sbjct: 484 LKNAKISSWEHGLIRGEDKQLGQLKGRYLVARSEADAPDIDGRVYVRG--NLPIGEFAQV 541 Query: 427 KVEHADEYDLWGSRV 441 +V +YDL + Sbjct: 542 RVIGHTDYDLIAEPI 556 >UniRef50_A3EVU0 RNA modification enzyme, MiaB family n=3 Tax=Leptospirillum RepID=A3EVU0_9BACT Length = 483 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 167/451 (37%), Positives = 256/451 (56%), Gaps = 28/451 (6%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 SK +G VSLGCPKNLVD+E ++ L +G+ V+P ++A++++VNTC F+ A + Sbjct: 29 SKGLKAKTVGIVSLGCPKNLVDTETMIHSLSEKGFRVIPDLEEAEVIVVNTCSFVTDARK 88 Query: 62 ESLEAIGEAL----NENGKVIV-TGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHH 115 ES++ + E N K++V TGCL ++ +++ + P+V + P + E + Sbjct: 89 ESIDTLLEMAQYKENGKAKILVGTGCLVSRYREELPGLLPEVDMLLSPSEEVSIGELLSS 148 Query: 116 YVPKPK----HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 K S +P + +LTP H AYLKISEGC+H C+FC IP RG VSR Sbjct: 149 PESKTSLPSTPLILPSSIPFRRKRLTPNHRAYLKISEGCDHTCSFCAIPLSRGLQVSRTR 208 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG- 230 +L E + + D GV+E+ +I+QD + YG D++ G + L E++ ++G Sbjct: 209 ESLLEEVRMMADEGVREVTLIAQDLTRYGSDLEDGEG----------LPRLLEEIDRIGR 258 Query: 231 -IWTRLHYVYPYPHVDDVIPLMAEGK-ILPYLDIPLQHASPRILKLMKRPGSVDRQLARI 288 W RL Y YP D ++ ++ + IL YLDIP QH S +LK M RPG+ + + I Sbjct: 259 IPWVRLLYAYPTQVTDRLLKVIRDSSTILKYLDIPFQHVSGTVLKRMNRPGNRESTMRLI 318 Query: 289 KQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALP 348 + R I P++TLR+TFIVGFPGETEE+F + +FLK +RLD VG F +S EG + + Sbjct: 319 DRIRRILPDITLRTTFIVGFPGETEEEFLEIEEFLKWSRLDHVGVFPFSREEGTPSFDMD 378 Query: 349 DQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAI---GRSMADAPE 405 Q+P +K +R R M +Q+ IS E+ ++ +G+ + V+I+ E+ + GR AP+ Sbjct: 379 GQIPSRLKTQRRKRLMGVQKAISLEKKKDWLGKVMPVLIEGPSEQSPLILSGRLPGMAPD 438 Query: 406 -IDGAVYLNGETNVKPGDILRVKVEHADEYD 435 IDG V + PG I+ KV+ YD Sbjct: 439 GIDGEVLVLS-GEASPGSIVSCKVKKVHAYD 468 >UniRef50_Q607P8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q607P8_METCA Length = 436 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 108/438 (24%), Positives = 182/438 (41%), Gaps = 20/438 (4%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 +I SLGC N + E E + G+ +V DAD++++N+C AV++S + I Sbjct: 1 MRINLQSLGCRLNEAELESWAREFQAAGHRLVSETGDADLIVLNSCAVTAEAVRKSRQMI 60 Query: 68 GEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 +++++GC V + +++E + F Sbjct: 61 RRTQRLSPRARLVLSGCYATLHGDEAAAL-GVDLVVSNADKSRLVEIAARELALEAMPEF 119 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 + E + R A++K+ +GC +RCTFCI+ RG+ SR EV+ E +RL G Sbjct: 120 STEPGEAALFALGRQRAFVKVQDGCRYRCTFCIVTVARGEERSRLPAEVIREIRRLQAEG 179 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVD 245 V+E+++ YG D+ P+ + S+ ++ RL + P+ Sbjct: 180 VQEVVLTGVHLGGYGSDLG--------LPLDALIRSILQETE--IPRLRLGSLEPWDLPP 229 Query: 246 DVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 L + +P+L +PLQ S +LK M R + R P++ + + I Sbjct: 230 GFFDLFENPRFMPHLHLPLQSGSDTVLKRMARRCKSEEFARLADHARRQVPDINITTDII 289 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VGFPGETE +++ L F++ + F YS EG A A+ VP E+K+ER + Sbjct: 290 VGFPGETEREWEESLQFIETIGFGDIHVFTYSVREGTKAAAMGGHVPAEIKKERSRVLHE 349 Query: 366 LQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILR 425 L L VGRE+ V+ + + G + V + I Sbjct: 350 LALGQKRALLGRFVGREMPVLWENRRDGADRGYTPNYL-----RVAIQTPETGLTNRITP 404 Query: 426 VKV--EHADEYDLWGSRV 441 V++ A LW V Sbjct: 405 VRLVKVDASGEFLWCGPV 422 >UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7K6_GEMAT Length = 473 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 160/452 (35%), Positives = 242/452 (53%), Gaps = 31/452 (6%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 K G V+LGC KN VDSER L +L G + V DAD+V+VNTCGFID+A ES+EA Sbjct: 1 MLKFGLVTLGCDKNTVDSERYLADLVAHGAEAVQDLRDADVVVVNTCGFIDAAKAESIEA 60 Query: 67 IGEALNEN-----GKVIVTGCLGAKED-QIREVHPKVLEITGPHSYEQV-LEHVHHYVPK 119 I +A V GC+ + ++ E P+V G +++ E V + Sbjct: 61 IVDAARLKDEGRCKAVFAIGCMVERHKDELLEALPEVDVFLGNSETDRLVPELVERGLIG 120 Query: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179 + + H YLKISEGC+H C FC IP MRG S + E++ EA+ Sbjct: 121 GS---LVEHPGVRLFSGDAAHVRYLKISEGCDHGCAFCAIPLMRGKHRSFALDELVREAQ 177 Query: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG--IWTRLHY 237 L G +EI +++QD + YG D + G + L E L + W R Y Sbjct: 178 LLEVQGAREINLVAQDLAHYGRDRRDGHG----------LPELLEALVRETSIPWIRNMY 227 Query: 238 VYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296 +Y ++ ++A +I+ YLD P+QH S +L M+RP R+ ++R+I P Sbjct: 228 LYSTGITPRLLEVIAAHPRIVRYLDTPMQHGSDAVLTRMRRPERQKTIRERLARYRDIVP 287 Query: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356 +L +R++ IVGFPGETE+DF +L DFL+E + DRVG F YSP EG A+A+ D V + +K Sbjct: 288 DLAVRTSVIVGFPGETEDDFNILCDFLEEMQFDRVGVFTYSPQEGTRAHAMEDDVADSIK 347 Query: 357 EERWNRFMQLQQQISAERLQEKVGREILVIIDEVD--EEGAIGRSMADAPEIDGAVYLNG 414 +ER R +LQ+ I+AER + +GRE V+++ + + R+ A +IDG V+++ Sbjct: 348 QERKERIEELQRAITAERYERFLGREARVLVERRGDYPDVWMARAPWQADDIDGLVHVDV 407 Query: 415 ETNVK-----PGDILRVKVEH-ADEYDLWGSR 440 +++ PG + V ++H D+YD + Sbjct: 408 PESMRKVLVSPGAFVDVTIDHVVDDYDFAATL 439 >UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6E2_9ACTN Length = 504 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 143/479 (29%), Positives = 236/479 (49%), Gaps = 40/479 (8%) Query: 2 SKVTPQPKIG--FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSA 59 S + QPK FV+LGC KN VD++R+ L G++ AD+VI+NTC F++SA Sbjct: 27 SNASKQPKASCLFVTLGCAKNQVDTDRMRALLLKSGFEESRDASSADVVIINTCSFLESA 86 Query: 60 VQESLEAIGEALNE------NGKVIVTGCLGAKEDQIR-EVHPKVLEITGPHSYEQVLEH 112 ES+E + + +I+ GC+ ++ + P+V + ++ Sbjct: 87 TSESIEVTLDLAQKRTSGITKLPIIMCGCVPSRYGAALDKELPEVSAFVKATDEDSIVGI 146 Query: 113 VHHYVP-KPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 V + + F + + ++ A++KISEGC+ C FC IP +RG SR Sbjct: 147 VSDVLGIEHPTFSFSQELSARALRTIEGTSAFVKISEGCDRYCAFCAIPFIRGHYASRCP 206 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHR--------------------TGFHN 211 E+ SE L++ GVKEI++I QDT +G D R ++ Sbjct: 207 EEIFSEITMLMEGGVKEIILIGQDTGIWGEDFSSRGAASVLHKDSDLHDPSSASSFDKNS 266 Query: 212 GEPVKTSMVSLCEQLSKL----GIWTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQH 266 + ++ L +++++ W R+ Y+ P +D+I + + ++LPY+DIP+QH Sbjct: 267 TQHESMNLAWLLREVARIVRPYKAWIRVLYLQPEGMTEDLIATIRDTPEVLPYIDIPIQH 326 Query: 267 ASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEA 326 + R+LK M R GS + R P++ LR+T +VGFP ET+E+ L+DF K+ Sbjct: 327 CNERLLKKMGRSGSASQLHKLFAHLRHEIPQMVLRTTGMVGFPTETDEEAAELVDFFKQE 386 Query: 327 RLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVI 386 D + F YS G A + Q+ E K ER +++ + VG + VI Sbjct: 387 EFDYMSVFSYSQELGTTAAKMRGQISAETKIERTQTLRDTAEELGFAATAKHVGEVVDVI 446 Query: 387 IDEVD----EEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 ID +D ++ IG + AP+ DG V++ +T+ PGD++RVK++ A Y+L G V Sbjct: 447 IDSIDMDSPDKERIGHAWFQAPDCDGCVHI-LDTDANPGDVVRVKLKEAYCYELVGELV 504 >UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT8_9BACT Length = 416 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 152/428 (35%), Positives = 232/428 (54%), Gaps = 26/428 (6%) Query: 23 DSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNENG-----KV 77 DSE + E + +V ++ D+ IVNTCGFI AV+ES++ I + K+ Sbjct: 2 DSEVLAGRFEPENWTLVDRVEECDIAIVNTCGFIQPAVEESIDVILDLEEMKAQGTLEKI 61 Query: 78 IVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKL 136 V GCL + + +++ P V ++ + + S + + Sbjct: 62 CVVGCLVNRYGEDLKKEFPSVDLWAEAEDWDSLSRALG----------IDSPRRGRRILT 111 Query: 137 TPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDT 196 YLK+ EGC+ RC+FC IPS+RG L SR ++++EA +L + G KE+ ++ QD Sbjct: 112 ESPWTRYLKVGEGCDTRCSFCTIPSIRGPLRSREPKDIVAEAVKLAEEGAKELCLVGQDL 171 Query: 197 SAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIP-LMAEGK 255 + YG D+ R ++ E IW RL Y++P + + ++ + Sbjct: 172 TVYGSDLSKRGSLSG-------LLDAMEAELPEDIWLRLFYLHPSRVDEASLERVLNSSR 224 Query: 256 ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEED 315 ILP+LDIP+QH +L+ M RP + K R + P+ R+T +VGFPGETE+ Sbjct: 225 ILPWLDIPIQHVDADVLRRMNRPPVEEHIRKLFKAGRRMFPDFAFRTTIMVGFPGETEKA 284 Query: 316 FQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERL 375 FQ LLDF+++ DR+G F + P EG A +PDQ+P++ K+ R+ M+LQQ IS R Sbjct: 285 FQSLLDFVEDVAFDRLGAFTFCPEEGTPAALMPDQIPQDEKDRRYAELMELQQGISLARQ 344 Query: 376 QEKVGREILVIIDEVDEEGAI--GRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADE 433 + VG+E+ V+I+EVDEE GRS DAPEIDG V ++G + PGD++RV + A E Sbjct: 345 RGFVGKEMDVLIEEVDEEDGTRWGRSFRDAPEIDGLVSISGAKDDVPGDMVRVSITDASE 404 Query: 434 YDLWGSRV 441 YDL+G RV Sbjct: 405 YDLFGERV 412 >UniRef50_D0LST9 RNA modification enzyme, MiaB family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LST9_HALO1 Length = 521 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/475 (23%), Positives = 196/475 (41%), Gaps = 60/475 (12%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 P++ + GC N+ DS+ + L GY S D AD++++NTC + A + L Sbjct: 44 PRVYLETYGCQMNVADSDMLTGILLDAGYRRAASADAADVILINTCAVRERAEDKVLARA 103 Query: 68 GEA-----LNENGKVIVTGCLGA-KEDQIREVHPKVLEITGPHSYEQVLEHVHHY--VPK 119 + + + + GC+ +D + E P V + GP SY ++ E + + Sbjct: 104 RQLSALKRQRPDMVLGIAGCMAEHLKDSLLEQAPYVDIVAGPDSYRRMGELLARARDLAA 163 Query: 120 PKHNPFLSLVPEQGVKLT--------------------------PRHYAYLKISEGCNHR 153 P + V+ ++ I GC+ Sbjct: 164 PAAGERADSDAPRPVRAPGVGAQVVDVQLDKGETYEGLSGALGGDGISGFVTIQRGCDKF 223 Query: 154 CTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGE 213 CTFC++P RG E+L + + V+AG +E++++ Q ++Y + Sbjct: 224 CTFCVVPFTRGRERGSAPREILRQVRAYVEAGYREVVLLGQTVNSYRYEDVG-------- 275 Query: 214 PVKTSMVSLCEQLSKLGI--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPR 270 L ++++ R YP +VI +A E K+ Y+ +PLQ S Sbjct: 276 -----FAELLRAVARVDGLERIRFTSPYPVDFTAEVIDAIASEDKVCKYVHLPLQSGSDE 330 Query: 271 ILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDR 330 +L M+R +VD A + R P++ + + + F GETE D Q L ++E R D Sbjct: 331 VLARMRRGYTVDDFRAIVAALRARMPDIAISTDILSSFSGETEADHQATLALMRELRFDS 390 Query: 331 VGCFKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE 389 F+YS A LPD V E K+ R + LQ++ISAE ++G+ V++ Sbjct: 391 AFMFRYSERSLTYAAKKLPDDVSEADKKRRLAEIIALQERISAEVFAAQIGKRERVLLHN 450 Query: 390 VDEE---GAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV 441 + +GR+ +V + + GDI+ V++E A L+G + Sbjct: 451 RSKRSDQQLVGRTDG-----FKSVIVPAAG-LAIGDIVEVEIERATMATLFGRPI 499 >UniRef50_A9HM32 MiaB-like tRNA modifying enzyme n=12 Tax=Alphaproteobacteria RepID=A9HM32_GLUDA Length = 420 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 121/435 (27%), Positives = 192/435 (44%), Gaps = 30/435 (6%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEAL 71 ++ GC N +SE + G+ D++IVNTC A +++ +AI A Sbjct: 7 ILTFGCRLNTYESEVMR------GHAAALD----DVIIVNTCAVTAEAERQARQAIRRAH 56 Query: 72 N--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQV----LEHVHHYVPKPKHNPF 125 +++VTGC + P V + G + + Sbjct: 57 RDRPGARIVVTGCAAQIDPDRWSALPGVTRVLGNREKLEAASWTPAAMQDGHAVSDIMAA 116 Query: 126 LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAG 185 VP + R A++++ +GC+HRCTFCIIP RG S P+G V+ + + LV +G Sbjct: 117 TETVPHLVTEFAGRTRAFVEVQQGCDHRCTFCIIPFGRGPSRSVPVGAVVEQVRALVASG 176 Query: 186 VKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVD 245 +EI++ D +++G D+ R ++V E+L RL V P D Sbjct: 177 YREIVLTGVDITSWGGDLPGRPALGQLCRRVLALVPELERL-------RLSSVDPVEIDD 229 Query: 246 DVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTF 304 D+ L+A EG+ +PYL + LQ S +LK MKR V+ + + R P+L + + Sbjct: 230 DLWRLLAQEGRFMPYLHLSLQAGSDMVLKRMKRRHLVEDVARVLDRARACRPDLGIGADV 289 Query: 305 IVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFM 364 I GFP ET+ F LDF++ RL + F YS G A +P VP V++ER + Sbjct: 290 IAGFPTETDALFAETLDFVRAQRLPYLHVFPYSERPGTPAARMP-AVPVAVRKERAAQLR 348 Query: 365 QLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDIL 424 Q + + +GR + V+++ G S AP L+G T + G I+ Sbjct: 349 AAGQAAARDYHASLLGRTLNVLLETAT----TGHSEEFAPVRLAPDRLDG-TAAEAGRIV 403 Query: 425 RVKVEHADEYDLWGS 439 V+ DE L Sbjct: 404 TVRATAIDENGLVAE 418 >UniRef50_A4S5H4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S5H4_OSTLU Length = 450 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 159/458 (34%), Positives = 256/458 (55%), Gaps = 37/458 (8%) Query: 12 FVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEA- 70 VSLGCPKN VD E +L +L G+DV ++ AD +++N+CGF++ A ES+EAI EA Sbjct: 1 MVSLGCPKNTVDGEVMLGDLHGAGFDVTDDHESADAIVINSCGFVEDAKNESVEAILEAS 60 Query: 71 --LNENGKVIVTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 N + K+IVTGCL + + + P+ I G +Y + + V + + Sbjct: 61 QLANGSKKIIVTGCLAQRYANDLANELPEADVIVGFENYANLPKTVGGLLGVETNGLIAP 120 Query: 128 L--------------VPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGE 173 + +++TPRH AYL+++EGC+H+CTFC IPS RG S+P Sbjct: 121 QQARVQVGGASPPFREEIKRLRITPRHTAYLRVAEGCDHKCTFCAIPSFRGRFRSKPWQS 180 Query: 174 VLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI-- 231 ++ EAK L D+GV+E+ +I++DT+ +G+D++ G + L L+++ Sbjct: 181 IIDEAKALADSGVRELNLIAEDTNQWGIDLRASDG--------RGLAELLYALAEVEGIE 232 Query: 232 WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQ 290 W R+ Y YP D++I +A+ ++ Y+DIPLQH + L M RP + + Sbjct: 233 WMRILYAYPSYFSDELIRAIADVPQVCKYIDIPLQHITNLSLLRMNRP-PRQHTEDLLYK 291 Query: 291 WREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQ 350 R+ P+L LR+TFI GFPGETEE+ + L+ F ++ + +R+G F YS +G A PDQ Sbjct: 292 LRDRIPDLALRTTFISGFPGETEEEHEELMQFCRDFKFERLGAFAYSEEDGTPAMEYPDQ 351 Query: 351 VPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEG--AIGRSMADAPEIDG 408 VPEE++ R ++ + QQ+IS + +VG+++ V+ID DE+ IGR+ +AP+ID Sbjct: 352 VPEEIRAIRRDQLVSQQQEISEDFAMSRVGKDVDVLIDNWDEDMQAFIGRTTLEAPDIDP 411 Query: 409 AVYL-----NGETNVKPGDILRVKVEHADEYDLWGSRV 441 V++ G ++PG + R V + +DL + Sbjct: 412 VVFVTEDKSKGLPPIEPGQMRRCNVIGSSLFDLEAQPI 449 >UniRef50_A4YEI0 RNA modification enzyme, MiaB family n=3 Tax=Sulfolobaceae RepID=A4YEI0_METS5 Length = 418 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 108/440 (24%), Positives = 202/440 (45%), Gaps = 28/440 (6%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 +I F + GC N D+ ++T L+ +++V S + AD++++NTC ++ + I Sbjct: 1 MRIYFETYGCALNKGDTYSMMTLLKGRNHEIVNSEEQADVLVINTCAVRMETEEKMKKRI 60 Query: 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 E K++V GCL E + + GP S + + V + + Sbjct: 61 LELSKTGKKLVVAGCLAGAEPGLVMSLAPQSSLIGPQS---IGDVVKAVESRERIVSLHG 117 Query: 128 LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 +P + + + I++GC C FCI R +L S P ++ A++ ++ G K Sbjct: 118 ELPSVLPSVFEGLISVIPIADGCAGSCNFCITKLARKELRSYPPRMIVETARKAIEKGAK 177 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYPYPH-- 243 EI + QDT+AYG+D+ + L ++S L R+ + P Sbjct: 178 EIELTGQDTAAYGLDLGRDI----------RLADLVGEVSSLEGDFMVRVGMMTPELAMR 227 Query: 244 -VDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRS 302 +DD++ K+ + +P+Q + ++L+ M R ++D +++ R+ P + + + Sbjct: 228 QLDDLLDAWDNPKVYKFFHLPVQSGNDQVLRAMNRKYTLDEFREIVREIRKRFPLVNITT 287 Query: 303 TFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNR 362 IVG PGE E F+ L+ +KE R +R+ YS + + QVP +K+ER R Sbjct: 288 DIIVGHPGEDENAFEDTLNLMKELRFERIHIAMYSLRPNTRSAMMT-QVPGPIKKERLKR 346 Query: 363 FMQLQQQISAERLQEKVGREILVII-DEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPG 421 + L +++S E +E VGR++ V++ + + IGR++ P I + G Sbjct: 347 AVTLYEELSREIHREYVGRKMKVLVLENGKDNTKIGRTLNYIPVIV--------KDADLG 398 Query: 422 DILRVKVEHADEYDLWGSRV 441 ++ + +DL GS V Sbjct: 399 KWYEAEITDSSFFDLRGSIV 418 >UniRef50_B8J4P8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4P8_DESDA Length = 442 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 164/455 (36%), Positives = 239/455 (52%), Gaps = 32/455 (7%) Query: 1 MSKVTPQPKIGFVSL--GCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDS 58 M+ Q KI SL GCPKN VDSER+L L V AD+V +NTCGFID Sbjct: 1 MTSANKQKKIKVWSLSLGCPKNRVDSERLLGSLGAP-VSHVEHMGRADLVFINTCGFIDP 59 Query: 59 AVQESLEAIGEA------LNENGKVIVTGCLGAKE--DQIREVHPKVLEITGPHSYEQVL 110 AV+ES+ A+ +A ++ + V GC+ + + + E P+V ++ Sbjct: 60 AVRESVRAVLDAGQRLGRCSKKPLLAVGGCMVGRYGAENLAEDLPEVDLWLPTADLDRWP 119 Query: 111 EHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 V + P P + + + T YA+LKI EGC H+C FC IPS+RG L S P Sbjct: 120 GMVAEALALP--TPPVRMPGGGRLLSTGPSYAWLKIGEGCRHKCAFCTIPSIRGGLHSLP 177 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 ++ EA+ L+ GV+E+ +++QD +A+G D+ +K + SL E+L+ L Sbjct: 178 AEYIVDEARALLGQGVRELALVAQDLTAWGADLG----------MKNGLPSLLEKLAALD 227 Query: 231 I--WTRLHYVYPYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQLA 286 W RL Y+YP +++ L+ + +LPYLDIPLQHA P +L M RP + + Sbjct: 228 GLAWLRLLYLYPSGVTPELLALIRDTGAPLLPYLDIPLQHAHPDVLSRMGRPFAGNP-RR 286 Query: 287 RIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANA 346 + R+ P LR+TFIVG+PGET+E F+ L F++E+ VG F Y +G +A Sbjct: 287 VLDAVRQNLPHAALRTTFIVGYPGETDEQFESLCRFVEESAFQHVGVFAYQAEDGTEAAT 346 Query: 347 LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADA 403 LPDQVP+ VK+ R + M +Q IS L VG + V++D E GR A Sbjct: 347 LPDQVPDAVKQWRRDTLMDIQADISERLLAAHVGSRMQVLVDAPHPEWPGLHSGRVWLQA 406 Query: 404 PEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 PE+DG Y++G V PG ++ + EYDL Sbjct: 407 PEVDGITYVSGPG-VAPGALVECDIVENTEYDLTA 440 >UniRef50_Q726F7 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Desulfovibrionales RepID=RIMO_DESVH Length = 430 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 149/444 (33%), Positives = 224/444 (50%), Gaps = 34/444 (7%) Query: 10 IGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE 69 + +SLGCPKN VD+E +L L V AD+V++NTCGFI AV+ES+ I E Sbjct: 4 VYSISLGCPKNRVDTEHLLGSLGVA-VQPVEHLSRADVVLINTCGFILPAVEESVRTIVE 62 Query: 70 AL------NENGKVIVTGCLGAKE--DQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPK 121 + + + V GCL + ++ P+V + H + Sbjct: 63 TIDDLSGLRKRPLLAVAGCLVGRYGAKELASELPEVDVWLPNQDITAWPAMLAHALKLEG 122 Query: 122 HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRL 181 + T YA+LKIS+GC H C+FC IPS+RG S P + EA+ L Sbjct: 123 AVT------PGRLLSTGPSYAWLKISDGCRHNCSFCTIPSIRGGHRSTPADVLEREARDL 176 Query: 182 VDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVY 239 V GV+E+++++QD +A+G D+ G + +L E+L + RL Y+Y Sbjct: 177 VAQGVRELVLVAQDVTAWGEDIGAPHG----------LATLLERLLPVPGLARLRLMYLY 226 Query: 240 PYPHVDDVIPLMAEGK--ILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P +++ M + ++PY D+PLQHA P IL M RP + D +++ R+ P+ Sbjct: 227 PAGLTRELLGFMRDAGAPLVPYFDVPLQHAHPDILSRMGRPFARDP-RRVVERVRDFFPD 285 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 LR++ IVGFPGET+E + L F++E R +G F Y EG A +P+QV + VKE Sbjct: 286 AALRTSLIVGFPGETDEHYAALTSFVEETRFTHMGVFAYRAEEGTPAAEMPEQVEDRVKE 345 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGA---IGRSMADAPEIDGAVYLNG 414 R + M++Q +IS E L G V++D EE GR+ APEIDG Y++G Sbjct: 346 WRRDALMEVQAEISEELLAVHEGTRQQVLVDAPHEEWPGLHTGRTWFQAPEIDGITYVSG 405 Query: 415 ETNVKPGDILRVKVEHADEYDLWG 438 V+PG ++ + YDL Sbjct: 406 PG-VEPGALVEADIVETRTYDLVA 428 >UniRef50_UPI000180B378 PREDICTED: similar to CDK5 regulatory subunit associated protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180B378 Length = 618 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 100/475 (21%), Positives = 195/475 (41%), Gaps = 44/475 (9%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 + F GC N+ D E L+ GY + AD++++ TC + A + + Sbjct: 117 KTVYFEMYGCQMNVNDGEYAWAILKKAGYKKTTDINTADVIMLVTCSIREKAEDKIWNRL 176 Query: 68 GEALNEN--------GKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + K+ + GC+ + + +I E V + GP +Y + + Sbjct: 177 KQLKTHKQNYHTPGYPKIGILGCMAERLKKKIVEKEKAVDIVAGPDAYRDLPRLLEQATT 236 Query: 119 KPK-------HNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 A++ I GC++ C++CI+P RG SRP+ Sbjct: 237 DSTTAINTMLSVDETYADIMPVRFDQDSKTAFVSIMRGCDNMCSYCIVPFTRGRERSRPV 296 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAY---------------GVDVKHRTGFHNGEPVK 216 +L E + L D G+K++ ++ Q+ ++Y G + + + Sbjct: 297 TSILEEIRILSDQGIKQVNLLGQNVNSYRDLSETQHSAVDAIAGNMSRGFKTIYKPKHGG 356 Query: 217 TSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYLDIPLQHASPRILK 273 L +++S++ R+ ++ P+P D+V+ +++E I + +P Q S +L Sbjct: 357 LRFADLLDRVSQVDPEMRIRFISPHPKDFPDEVLQIISERENICKQIHLPAQSGSSNVLN 416 Query: 274 LMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGC 333 LM+R + + L + + R + P + L + I GF GET+ D + L + + + Sbjct: 417 LMRRGHTREDYLNLVDRIRTLIPNVVLSTDIISGFCGETDSDHEDTLSLMSLVKYEYAFL 476 Query: 334 FKYSPVEGADAN-ALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDE--- 389 FKYS + A + D VPEE+K +R +++ Q + Q+ VG+ +LV++++ Sbjct: 477 FKYSIRQKTHAYHKMNDDVPEEIKSQRLQEVIKVYQDVLPTVHQKTVGKTLLVLVEKDKT 536 Query: 390 VDEEGAIGRSMAD------APEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWG 438 GR+ + ++ +V + GD + VKV G Sbjct: 537 KVPNTLQGRTDGNVKVFIPNYDVASSVTSQSTKTICTGDYIAVKVTSYKPNSYRG 591 >UniRef50_B9YB19 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YB19_9FIRM Length = 439 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 110/452 (24%), Positives = 185/452 (40%), Gaps = 33/452 (7%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + +LGC N +SE LR GY V + AD+ I+ TC ++A Sbjct: 1 MEGDEFMASVAISTLGCKVNAYESESTAQALRQRGYQTVDFKEKADVYIIFTCAVTNTAA 60 Query: 61 QESLEAIGEALNENGKVIVT--GCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYV- 117 +S + I +A +N +V GC + K+ + G +++ + + + Sbjct: 61 SKSRQKIHQARRQNPDALVCAVGCYVQIQADQMAEQEKIDILVGSSGKDKLPQLIDEALR 120 Query: 118 -------PKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + + AYLK+ +GCN C +CIIP RG S P Sbjct: 121 QRREPIVELHDVRTSAEFEMLPLDEFEHQTRAYLKVQDGCNQFCAYCIIPYARGRERSLP 180 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 + E L EA+RL KEI++ T YG D TS+ L + ++ Sbjct: 181 LDEALKEARRLAQK-HKEIVLAGIHTGRYGKDRD------------TSLCDLIRGMCEIE 227 Query: 231 I--WTRLHYVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 R+ + D+++ LM + KI +L IPLQ LK M RP + + +AR Sbjct: 228 PLERIRISSIEITEITDELLTLMETQPKIARHLHIPLQAGCDATLKRMGRPYTTAQFMAR 287 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 +++ R +++ + IVGFP E+E +F + FLK+ + + F +SP G A + Sbjct: 288 VEEIRTRIDGISISTDLIVGFPQESEAEFAATMAFLKQIQFSFIHVFPFSPKTGTPAQRM 347 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 Q+ EVK++R + + + +G+++ VII+ A G S P Sbjct: 348 SGQISSEVKKQRARQVGEFSRNSYYAVKSSWIGKDVDVIIETCVNGVAFGHSSEYLP--- 404 Query: 408 GAVYLNGETNVKPGDILRVKVEHADEYDLWGS 439 + + G + + H L Sbjct: 405 ----VQIDGEFASGQRIVARCTHMLGDQLAAQ 432 >UniRef50_D0GPB7 Protein YqeV n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPB7_9FUSO Length = 453 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 196/448 (43%), Gaps = 19/448 (4%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 K + + F +LGC N ++E I + Y V + AD+ IVNTC + A ++ Sbjct: 16 KNNAERTVAFYTLGCKVNQYETEIIRKDFLDHNYKEVDFDEKADVYIVNTCTVTNVADKK 75 Query: 63 SLEAIGEALN--ENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 + + + A N + V+ TGC + ++ I G E V ++ V Sbjct: 76 NRKMLRRAKNTNPDSLVVATGCYAQTNLDDLKEMKEIDFIIGNSKKENVFNIINKNVSHY 135 Query: 121 KHNPFLSLVPE---QGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSE 177 + + + L + A++KI +GC+ C++C IP RG SR VL E Sbjct: 136 QVDNIFDEKEYSSNKYTILREKARAFVKIQDGCSKFCSYCKIPYARGLSRSRATEHVLEE 195 Query: 178 AKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRL 235 L + G KE+++ + S YG+D++ KT +L E++ + R+ Sbjct: 196 INYLGEQGYKEVVLTGINMSEYGLDLEP----------KTDFDTLLEKILAVKSVERVRV 245 Query: 236 HYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREI 294 VYP D + ++ K++P+L + +Q +IL+LM+R + + +++ + Sbjct: 246 SSVYPDTITDKFLGMLKNNPKLMPHLHVSVQTLDDKILRLMRRNYKAEFVVNTLEKVKRE 305 Query: 295 CPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEE 354 PE+ L + IVGFP E EE+F + L + F YS E A L ++ Sbjct: 306 VPEVALTADIIVGFPQEEEENFANTMKNLDSLGFADLHVFPYSDREKTTAMLLDGKIDAV 365 Query: 355 VKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPE-IDGAVYLN 413 K+ R + +L AE ++ VG + V I+E+ E+ A G + ID Sbjct: 366 EKKRRVKKVEELNNIKYAEFRKKTVGSKQRVYIEEIVEDKAFGYTENYLKVFIDLKKGEK 425 Query: 414 GETNVKPGDILRVKVEHADEYDLWGSRV 441 +VK D++ K+ D L G + Sbjct: 426 NNLDVKVSDLVNTKIVDFDGILLEGDII 453 >UniRef50_O66772 Putative methylthiotransferase aq_474 n=3 Tax=Aquificaceae RepID=Y474_AQUAE Length = 410 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 35/433 (8%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F +LGC N D++ + + +GY+VV D AD+ ++NTC + S +AI Sbjct: 1 MKVAFETLGCRMNQFDTDLLKNKFIQKGYEVVSFEDMADVYVINTCTVTVGGDRSSRQAI 60 Query: 68 GEALNENGKVIV--TGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPF 125 +A N K IV TGC Q +V + G ++L+ + Y+ + + Sbjct: 61 YQAKRRNPKAIVVATGCYAQVNPQELAKLKEVDLVVGNTHKSELLKILEEYLERREKKVV 120 Query: 126 L-------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEA 178 + + V +LK+ EGCN CTFC+IP RG + S + +++ + Sbjct: 121 VGEIFREKEVRNFDTVLYFEGVRPFLKVQEGCNKFCTFCVIPYARGKVRSVDLEKIVHQV 180 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIW--TRLH 236 K L G KE+++ S YG D + ++ +L +L K+ RL Sbjct: 181 KLLAQKGFKEVVLTGTQLSQYGWDKGY------------NLYTLLTELIKIEGIELIRLS 228 Query: 237 YVYPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREIC 295 ++ +++ L+ +E KI P+ + LQ S RIL+LM R + + + E Sbjct: 229 SMHIKEMDKELLKLIVSEEKIAPHFHLSLQSGSNRILELMDRGYTREEYEEVVNFIVENR 288 Query: 296 PELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEV 355 P ++ + IVGFP E+EEDFQ +FLK + + F YS A+ L ++PE + Sbjct: 289 PISSIGTDVIVGFPTESEEDFQETYEFLKRIPISYMHIFPYSDRPFTKASKLKPKLPERI 348 Query: 356 KEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGE 415 K+ER +L Q+ E ++ G+E+ ++ E + + + + E Sbjct: 349 KKERVRILKELDQKKRQEFYEKNKGKELRALVIEE-----------NRLLTENYIDIKRE 397 Query: 416 TNVKPGDILRVKV 428 + G ++RV + Sbjct: 398 GYKEVGKLVRVLI 410 >UniRef50_A8F640 MiaB-like tRNA modifying enzyme n=1 Tax=Thermotoga lettingae TMO RepID=A8F640_THELT Length = 433 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 186/405 (45%), Gaps = 19/405 (4%) Query: 7 QPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEA 66 + LGC N +SE ++ +L G+ + P++ +AD+ ++NTC A ++S + Sbjct: 1 MKRAYVTFLGCKVNQYESEYMIEQLEQHGFVMSPNFSEADLCVLNTCAVTSEAARKSRQL 60 Query: 67 IGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNP 124 I + N + ++ TGC + Q I G + ++ ++ Y + Sbjct: 61 IRKLRRSNPDAVIVATGCYAHIDAQSLIDI-GANIIIGNNEKRNLVNYIARYFENSSNFV 119 Query: 125 FLSLVPEQGVK-----LTPRHYAYLKISEGCNHRCTFCIIPSMRGD-LVSRPIGEVLSEA 178 +S ++ ++ L+ R AY+K+ +GCN C++CI+P RG + S+P+ V+ E Sbjct: 120 DVSEPDQEVLEKVKSFLSDRTRAYIKLEDGCNEFCSYCIVPKTRGKQIRSKPVEVVIKEM 179 Query: 179 KRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV 238 L++ G KEI++ + YG D+ + +L Q+ RL + Sbjct: 180 NDLLNNGYKEIVLTGVNLGKYGRDIGTSLSM--------LLRTLLNQIHD-DSRIRLSSI 230 Query: 239 YPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 D++I L A K+ P+L IPLQ S RIL+ M R +V+ L ++ + I Sbjct: 231 NVQDLSDELISLFALSNKLCPHLHIPLQSGSNRILQKMNRKYTVEEALDIFEKLKSINQY 290 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + IVGFPGET DF + +KE +V FKYS G A+ L + + KE Sbjct: 291 FSFTTDVIVGFPGETIGDFLQTQELIKEIGFVKVHIFKYSSRPGTVASKLGYHISNDEKE 350 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMAD 402 R L ++IS + ++ +G+ V+++ G Sbjct: 351 RRAKELAALCKEISEKYRKKSIGKIRHVLVEHNRSGICSGYDEYY 395 >UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms RepID=CK5P1_DICDI Length = 607 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 110/487 (22%), Positives = 203/487 (41%), Gaps = 58/487 (11%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ + GC N+ D E I + +++ GY + ++ AD+V +NTC ++A + + Sbjct: 107 RKVWIETYGCQMNVSDEEVICSIMKSSGYTISNDFNTADIVFLNTCSIRENAEAKIWLRL 166 Query: 68 -------GEALNENGKVIVTGCLGAKEDQ-IREVHPKVLEITGPHSYEQVLEHVHHYVPK 119 + N V V GC+ + + + E KV + GP +Y + + Sbjct: 167 TELRAIRRKQGRPNLIVGVLGCMAERLKEKLLESDMKVDIVVGPDAYRSLPSLLATLEDG 226 Query: 120 PKHNPF--------LSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI 171 + + K + AY+ I GCN+ C++CI+P RG SRPI Sbjct: 227 EQQTAINVILSADETYADIKPVRKSDNQVSAYVSIMRGCNNMCSYCIVPFTRGRERSRPI 286 Query: 172 GEVLSEAKRLVDAGVKEILVISQDTSAYG--------------------------VDVKH 205 +L E K L D G KEI ++ Q+ +++ + Sbjct: 287 DSILREVKDLSDQGFKEITLLGQNVNSFNYYEESNNNNNENFIDTQKNKLELESLKPREG 346 Query: 206 RTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYLDI 262 + + L E +SK+ R+ + P+P DD++ L+ I L I Sbjct: 347 FKTIYKSPKKGITFTKLMELVSKVDPEIRIRFTSPHPKDFPDDLLELIKNQPNICKQLHI 406 Query: 263 PLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDF 322 P Q S ++L+ M+R + + + I + + P + S FI GF GE+++D + Sbjct: 407 PAQSGSSKVLESMRRGYTRESYIELIDTIKRVLPGCAISSDFISGFCGESDQDHNETISL 466 Query: 323 LKEARLDRVGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGR 381 ++ + F YS E A+ L D VP +K R + + + E+ Q ++G Sbjct: 467 MEYVGYENAFMFMYSLREKTHAHRQLKDDVPTTLKNSRLTQVVDTFYKRLKEKNQLEIGN 526 Query: 382 EILVIIDEVDE---EGAIGRSMADAPEIDGAVYLNGE---TNVKPGDILRVKVEHAD-EY 434 LV++D + + +GR+ + + V ++ + ++K G+ V++ D E Sbjct: 527 HHLVLVDGFSKRSEKDFVGRT-----DTNKKVLISNDIENQDIKVGEYYIVEIIKGDSEV 581 Query: 435 DLWGSRV 441 L G + Sbjct: 582 TLKGKPI 588 >UniRef50_UPI00006CFA0B RNA modification enzyme, MiaB family n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFA0B Length = 604 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 112/451 (24%), Positives = 193/451 (42%), Gaps = 44/451 (9%) Query: 2 SKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQ 61 ++ Q K + GC N D+E I L+ G+ + D+AD+V +NTC + A Sbjct: 70 TQFDSQKKYFIETYGCQMNESDTEIISGILQKAGFVRESNLDNADIVFLNTCAIREGAEN 129 Query: 62 ESLEA---IGEALNENGKVIVTG---CLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVH 114 + + I + K ++TG C+ + +D++ E + V I GP +Y + + Sbjct: 130 KIWKRLENIRAYKRKEKKQLITGVLGCMAERLKDKLVEKNKVVDIIVGPDAYRDLPRLIQ 189 Query: 115 HYVPKPKH--------NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 166 P + A++ I GCN+ C+FCI+P RG Sbjct: 190 SLDPSTDDYSINVQLSLEETYADIVPVRQNPDSCQAFVSIMRGCNNMCSFCIVPFTRGRE 249 Query: 167 VSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYG-------VDVKHRTGFHNGEPVK--- 216 SR I ++ E K L + GVKEI ++ Q+ ++Y D+ H E K Sbjct: 250 RSRDIQSIVEEVKMLANQGVKEITLLGQNVNSYFDKEAEGYEDLDHLNSEGFKETFKLRK 309 Query: 217 -------------TSMVSLCEQLSKLGIWTRLHYVYPYPHV--DDVIPLMAE-GKILPYL 260 L E+++K R + P+P D V+ ++ + I L Sbjct: 310 VIRALLNSLLGKGARFAHLLEEVAKAAPEVRFRFTSPHPKDFPDPVLQVIKKYPNIAKNL 369 Query: 261 DIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLL 320 +P Q + +L M+R S + + + ++ P +TL S FI GF GET+++FQ L Sbjct: 370 HMPAQSGNTEMLTRMRRNYSRENYINLVDHIKQTIPGITLSSDFICGFCGETDQEFQDTL 429 Query: 321 DFLKEARLDRVGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKV 379 L+ + + F YS E A+ D VPEEVK++R + + + + +++V Sbjct: 430 TLLEYVKYENAFLFAYSLREKTHAHRHYQDDVPEEVKKQRLQQMIDVFHKNQELVNKQEV 489 Query: 380 GREILVIIDEVDE--EGAIGRSMADAPEIDG 408 GR LV+++ + GR+ + I Sbjct: 490 GRIHLVLVEGKGKFENQIRGRTDTNKRVIFN 520 >UniRef50_D1PM52 2-methylthioadenine synthetase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM52_9FIRM Length = 465 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 115/440 (26%), Positives = 187/440 (42%), Gaps = 34/440 (7%) Query: 3 KVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQE 62 K T ++ F +LGC N ++ + GY VV + + AD+ +VN+C + Q+ Sbjct: 28 KGTITMRVTFYTLGCKVNQNETGALAQLFEESGYTVVSNEEAADVYVVNSCTVTNFGDQK 87 Query: 63 SLEAIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP 120 S + + A N ++TGC + + +TG + +L V + Sbjct: 88 SRKWLRRAKRENPGAVTVLTGCYPQAFPEEASEIAEADVVTGSGNRRSILHDVQMVLNGE 147 Query: 121 KHNPFL--------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG 172 + K A++K+ +GCN RC +C+IP RG + SR Sbjct: 148 QERVIDIRPHEKGERFEELPMDKFAEHTRAFVKVEDGCNRRCAYCVIPRARGPVRSREES 207 Query: 173 EVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI- 231 +L E RL +AG KEI++ + +YG D TS+V L E+ + + Sbjct: 208 SILQELHRLTEAGYKEIVLTAISLPSYGTDSG------------TSLVELVEKAAAVPGV 255 Query: 232 -WTRLHYVYPYPHVDDVIPLMAE-GKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIK 289 RL + P D+VI ++ K+ P + LQ + L+ M+RP + + Sbjct: 256 ERLRLGSLDPDMLHDEVILRLSRVKKLCPQFHLSLQSGCDKTLRAMRRPYTTAQFAKIAD 315 Query: 290 QWREICP--ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 + R ++ + IVGFPGETEEDF+ + F+ +V F YS EG A Sbjct: 316 KLRHAFGAENVSFTTDVIVGFPGETEEDFEASMAFVTGQHFLKVHVFPYSRREGTPAYDF 375 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEV-DEEGAIGRSMADAPEI 406 PDQ+PE KE+R R + + AE + GR V+++ G + P Sbjct: 376 PDQIPEHEKEDRSRRMTAAVEAVRAEEAVKMQGRTAEVLLETPLSATLFTGYTKQYLP-- 433 Query: 407 DGAVYLNGETNVKPGDILRV 426 L + GDI++V Sbjct: 434 ----VLVTAPDHHTGDIVQV 449 >UniRef50_A6LKT7 MiaB-like tRNA modifying enzyme n=3 Tax=Thermotogaceae RepID=A6LKT7_THEM4 Length = 429 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 107/440 (24%), Positives = 198/440 (45%), Gaps = 32/440 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++ ++ GC N +SE + L EGY VV ++D+ ++N+C + A ++ + I Sbjct: 1 MRVSIITYGCKLNQYESELMTERLENEGYVVVNGEVESDIYVINSCVVTNEATRKVKQQI 60 Query: 68 GEALN--ENGKVIVTGCLGAK-EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH-- 122 + K++VTGC ++ E +V I G +++ + + Sbjct: 61 RRLKKRFPDSKIVVTGCYSQLFARELLEE--EVDLILGNKEKKRIESIIENVGVFVDRTY 118 Query: 123 -NPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRG-DLVSRPIGEVLSEAKR 180 N L+ R A++K+ +GC + C++C I RG + S+PI V+SE R Sbjct: 119 WNSDDLDEEYVFSSLSERTRAFIKVQDGCTNVCSYCTIRYARGMRIRSKPIELVVSEILR 178 Query: 181 LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYV 238 +V+ KEI++ + YG D +TS+++L + + K+ RL + Sbjct: 179 MVNKDYKEIVITGLNLGKYGKD------------KETSLLNLLKNVVKIKGDFRIRLSSI 226 Query: 239 YPYPHVDDVIPLM-AEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 P D++I + E K+ +L +PLQ S +IL+ M+R + L + R+ Sbjct: 227 NPEDINDELIKFIVNEEKVCNHLHVPLQSGSTKILEKMRRNYTQSDFLNLAYKLRKEDIN 286 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 ++ + +VGFPGET+EDF+ L +KE +V F+YS A + ++VP VK+ Sbjct: 287 FSITTDIMVGFPGETQEDFEETLKVVKEVMFSKVHTFRYSDRPNTLAYKMENKVPGNVKK 346 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER + ++++ E + VG+ VII+ + G L+ + Sbjct: 347 ERAIELDKFSKEVAKEYRKRLVGKSTKVIIESCKNKIYKGYDEYY--------VLHETSR 398 Query: 418 VKPGDILRVKVEHADEYDLW 437 G+ V + + + Sbjct: 399 GNFGNFAYVNIMAVTDEGVI 418 >UniRef50_C1DVQ2 Putative uncharacterized protein n=3 Tax=Hydrogenothermaceae RepID=C1DVQ2_SULAA Length = 445 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 111/445 (24%), Positives = 197/445 (44%), Gaps = 31/445 (6%) Query: 1 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV 60 M + + K+ F +LGC N ++ + + +GYD+ AD+ IVNTC + A Sbjct: 1 MRLESRKLKVAFATLGCRMNQFETSALEDQFSLKGYDITDFESVADIYIVNTCTVTNDAD 60 Query: 61 QESLEAIGEAL--NENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVP 118 + S + + +A N N V+ TGC Q P++ + G VLE V +Y+ Sbjct: 61 RTSRKTLRQAKRRNPNAIVVATGCYAQVSPQELAKIPEIDLVIGNSHKTAVLEIVENYIN 120 Query: 119 KPKHNPFL--------SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP 170 + N LK+ EGCN C+FCIIP RG + S Sbjct: 121 EKFENKVFIDNIFRENDFKTFFISTFYEGSRPILKVQEGCNSFCSFCIIPFARGKVRSAK 180 Query: 171 IGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLG 230 I +++++ K LVD G KEI++ S +G D K ++ L +QL + Sbjct: 181 IQDIVNQVKFLVDKGYKEIVLTGTQLSQFGYDHKEGY-----------LLDLLKQLVNVE 229 Query: 231 I--WTRLHYVYPYPHVDDVIPLMA-EGKILPYLDIPLQHASPRILKLMKRPGSVDRQLAR 287 RL + D +I + + KI P+ + +Q A R+LK MKR SV + + + Sbjct: 230 GLYRIRLSSMGINELDDYLIDFLTTQEKIAPHFHLSIQSADDRVLKDMKRNYSVKQYVEK 289 Query: 288 IKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANAL 347 +++ + P+ + + I GFP E E F+ + ++E + F YS + A Sbjct: 290 VEKILKNRPDTAIGTDIITGFPTEDETAFKNTVKNVEEIPFAYIHVFTYSMRDNTSAVKF 349 Query: 348 PDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEID 407 D+V +VK+ER ++ ++ S + ++ +G+++ +I E+ IG + Sbjct: 350 GDRVSPQVKKERTKILREIGERKSIDFRKKFLGKDMEFLIITEKEDYKIGLTGNY----- 404 Query: 408 GAVYLNGETNVKPGDILRVKVEHAD 432 ++ +T+ I++ K+ Sbjct: 405 --IHAKIKTDQPLNSIVKSKLTKVG 427 >UniRef50_B5YKW1 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKW1_THEYD Length = 407 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 103/430 (23%), Positives = 196/430 (45%), Gaps = 34/430 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 K+ F++ GC N +++R+ L T+GY V + ++A + I+NTC A +S I Sbjct: 1 MKVCFITYGCRVNQAEAQRLEKLLTTKGYVVTSNPEEASLWIINTCAVTHKAEVQSRHII 60 Query: 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 +A K VTGC R + + L++ + ++ + + Sbjct: 61 NKAKKLGKKAFVTGCYVEL---CRIENSENLKVFSNFEKDSIINNFEN------------ 105 Query: 128 LVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVK 187 + + RH A +K+ +GCN C++CI+P +R S I +++ E K G+K Sbjct: 106 -LNKSDTLKISRHRAIIKVQDGCNQYCSYCIVPYLRRKPRSYKIEQIMKEIKDYQSIGIK 164 Query: 188 EILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKL--GIWTRLHYVYPYPHVD 245 E+++ + YG+D K S+ L + + K G RL + Sbjct: 165 EVVLSGINIGLYGID----------YENKISLNKLLKAILKETSGFRIRLSSIEINHIDQ 214 Query: 246 DVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFI 305 + + ++++ +I +L IPLQH S RIL LM R + I++ ++ P++++ + + Sbjct: 215 EFLEIISDNRICKHLHIPLQHGSDRILGLMNRRYDAFQFSQIIEKIFKLYPDISIGTDVM 274 Query: 306 VGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQ 365 VGFP ETE+DF+ L +++ + F YS A+ + +Q+PE +K +R + ++ Sbjct: 275 VGFPSETEDDFKRTLQLIEKIGFSYLHVFPYSKRPFTKASEMTEQIPENIKRQRADCLIE 334 Query: 366 LQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILR 425 + ++ E +++ +G E+ VII+ G S + G+I + Sbjct: 335 VGKRKKLEYIKKFIGSELEVIIENKKNGFFSGTSDNYIK------CFVDNKKLVAGNIFK 388 Query: 426 VKVEHADEYD 435 V V + Sbjct: 389 VIVNNIKGEY 398 >UniRef50_O29021 Putative methylthiotransferase AF_1247 n=3 Tax=Archaeoglobaceae RepID=Y1247_ARCFU Length = 424 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 119/443 (26%), Positives = 206/443 (46%), Gaps = 35/443 (7%) Query: 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67 ++ + GC N DS+ + L G + S +DA++VI+N+CG ID ++ + + Sbjct: 1 MRVAIETYGCTTNQADSDIMRGFLS--GEFELSSVEDAEVVIINSCGVIDFTERKIIRRM 58 Query: 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLS 127 + E KV++ GCL + V P + + V++ V+ + K Sbjct: 59 LDLKREGKKVVLAGCLTRISKEALSV---ADSALSPDNLDMVVDAVYSALNGRKLFTERR 115 Query: 128 LVPEQGV-----KLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLV 182 + + +L A + ISEGC +C+FC RG L S + ++ EA+R V Sbjct: 116 FIDKAEFSHLKCRLRENAIAIVSISEGCLGKCSFCATKFARGRLRSFSMDAIVREAERAV 175 Query: 183 DAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGI--WTRLHYVYP 240 AG +EI + SQDT AYG+D + + L ++S++ R+ + P Sbjct: 176 RAGYREIQLTSQDTGAYGMDKG-----------RAMLPELLRKISEIEGEFRVRVGMMNP 224 Query: 241 YP---HVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPE 297 +D++I + KI +L IP+Q RIL+ MKR +V+ + ++ +R + Sbjct: 225 QHAVRMLDELINAYSSEKIYKFLHIPVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDD 284 Query: 298 LTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKE 357 + + + IVGFP ETEE F + +KE R D V +YS +G A L D +P +K+ Sbjct: 285 VLISTDIIVGFPTETEEAFWKSYELIKETRPDIVNITRYSARKGTPAARLRD-IPGWIKK 343 Query: 358 ERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETN 417 ER + L ++I E + VG+++ V++ + + GR++A V T Sbjct: 344 ERSRKLTDLMRKIGLENNKRFVGKKLRVLVTKEGKN---GRNLARMNSYRAVV-----TE 395 Query: 418 VKPGDILRVKVEHADEYDLWGSR 440 G+ + VK++ L G Sbjct: 396 GAVGEFVEVKIKDCRFNYLIGQL 418 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.160 0.489 Lambda K H 0.267 0.0491 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,065,665,984 Number of Sequences: 3077464 Number of extensions: 151185223 Number of successful extensions: 461630 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2006 Number of HSP's successfully gapped in prelim test: 3010 Number of HSP's that attempted gapping in prelim test: 447130 Number of HSP's gapped (non-prelim): 5936 length of query: 441 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 309 effective length of database: 634,171,108 effective search space: 195958872372 effective search space used: 195958872372 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 95 (40.9 bits)