07/01/2012 23:05:31 : INFO  : Run start: Sat Jan  7 23:05:29 GMT 2012
07/01/2012 23:05:40 : INFO  : Initialised job
07/01/2012 23:05:42 : INFO  : Renaming log file 'phyre2_20120107_230528.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/phyre_20120107_230528.log'
07/01/2012 23:05:44 : INFO  : Initialised job:
Sequence
>batch____
MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESE
LEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYID
LERVIPEAKKPRRIEIN

07/01/2012 23:05:46 : INFO  : Checked sequence
07/01/2012 23:05:52 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 23:05:54 : INFO  : PSI-BLAST 3 iterations
07/01/2012 23:07:07 : INFO  : PSI-BLAST 5 iterations
07/01/2012 23:08:38 : INFO  : Finished PSI-BLAST
07/01/2012 23:08:41 : INFO  : Running Buildali to generate a3m file
07/01/2012 23:16:52 : INFO  : Converting to HMM
07/01/2012 23:16:55 : INFO  : Calibrating HMM
07/01/2012 23:17:11 : INFO  : Searching HMM database
07/01/2012 23:20:11 : INFO  : Finished buildali
07/01/2012 23:20:14 : INFO  : Predicting secondary structure
07/01/2012 23:20:28 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 23:20:31 : INFO  : Predicting Disordered regions
07/01/2012 23:20:37 : INFO  : Predicted Disorder (Disopred)
07/01/2012 23:20:40 : INFO  : Running memsat_svm check
07/01/2012 23:23:39 : INFO  : Globular protein
07/01/2012 23:23:41 : INFO  : Predicted Transmembrane (memsat_svm) ID '07cd28a6c6f537ec'
07/01/2012 23:23:43 : INFO  : Initialising fold library search
07/01/2012 23:23:49 : INFO  : Initialised search input
07/01/2012 23:23:54 : INFO  : Building Ensemble models
07/01/2012 23:24:00 : INFO  : Building hh.d1gmea_.model.1.pdb
07/01/2012 23:24:25 : INFO  : Building hh.d1gmeb_.model.2.pdb
07/01/2012 23:24:45 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/hh.d1gmeb_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/d1gmeb_.2.pdb
07/01/2012 23:24:51 : INFO  : Building hh.d1shsa_.model.3.pdb
07/01/2012 23:25:10 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/hh.d1shsa_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/d1shsa_.3.pdb
07/01/2012 23:25:16 : INFO  : Building hh.c1shsD_.model.4.pdb
07/01/2012 23:25:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/hh.c1shsD_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/c1shsD_.4.pdb
07/01/2012 23:25:40 : INFO  : Building hh.c3glaA_.model.5.pdb
07/01/2012 23:25:56 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/hh.c3glaA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/07cd28a6c6f537ec/c3glaA_.5.pdb
07/01/2012 23:26:02 : INFO  : Building d1gmea_.1.pdb
07/01/2012 23:26:22 : INFO  : Building d1gmeb_.2.pdb
07/01/2012 23:26:40 : INFO  : Building d1shsa_.3.pdb
07/01/2012 23:26:59 : INFO  : Building c1shsD_.4.pdb
07/01/2012 23:27:18 : INFO  : Building c3glaA_.5.pdb
07/01/2012 23:27:39 : INFO  : Building c3l1eA_.6.pdb
07/01/2012 23:27:59 : INFO  : Building c2bolA_.7.pdb
07/01/2012 23:28:19 : INFO  : Building c2wj5A_.8.pdb
07/01/2012 23:28:39 : INFO  : Building c3aabA_.9.pdb
07/01/2012 23:29:00 : INFO  : Building d2h50a1.10.pdb
07/01/2012 23:29:20 : INFO  : Building c2klrA_.11.pdb
07/01/2012 23:29:39 : INFO  : Building c3q9qB_.12.pdb
07/01/2012 23:30:00 : INFO  : Building c2wj7D_.13.pdb
07/01/2012 23:30:20 : INFO  : Building c3igfB_.14.pdb
07/01/2012 23:30:39 : INFO  : Building d1rl1a_.15.pdb
07/01/2012 23:31:01 : INFO  : Building c2jkiS_.16.pdb
07/01/2012 23:31:22 : INFO  : Building c3eudE_.17.pdb
07/01/2012 23:31:43 : INFO  : Building d1wfia_.18.pdb
07/01/2012 23:32:05 : INFO  : Building d1ejfa_.19.pdb
07/01/2012 23:32:25 : INFO  : Building c1x5mA_.20.pdb
07/01/2012 23:34:31 : INFO  : Finished HH model building
07/01/2012 23:34:34 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 23:35:43 : INFO  : html domain output complete ID '07cd28a6c6f537ec'
07/01/2012 23:57:10 : INFO  : Run end  : Sat Jan  7 23:57:09 GMT 2012
