08/01/2012 19:25:19 : INFO  : Run start: Sun Jan  8 19:25:18 GMT 2012
08/01/2012 19:25:22 : INFO  : Initialised job
08/01/2012 19:25:23 : INFO  : Renaming log file 'phyre2_20120108_192518.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/0755821a9535454d/phyre_20120108_192518.log'
08/01/2012 19:25:23 : INFO  : Initialised job:
Sequence
>batch____
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGK
SSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGL
EIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRF
GGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC
RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWIL
KLLKTRKPGEIQPYKRKDLYPIK

08/01/2012 19:25:24 : INFO  : Checked sequence
08/01/2012 19:25:26 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 19:25:27 : INFO  : PSI-BLAST 3 iterations
08/01/2012 19:27:52 : INFO  : PSI-BLAST 5 iterations
08/01/2012 19:30:12 : INFO  : Finished PSI-BLAST
08/01/2012 19:30:13 : INFO  : Running Buildali to generate a3m file
08/01/2012 19:37:23 : INFO  : Converting to HMM
08/01/2012 19:37:26 : INFO  : Calibrating HMM
08/01/2012 19:37:38 : INFO  : Searching HMM database
08/01/2012 19:45:02 : INFO  : Finished buildali
08/01/2012 19:45:03 : INFO  : Predicting secondary structure
08/01/2012 19:45:08 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 19:45:09 : INFO  : Predicting Disordered regions
08/01/2012 19:45:11 : INFO  : Predicted Disorder (Disopred)
08/01/2012 19:45:12 : INFO  : Running memsat_svm check
08/01/2012 19:50:19 : INFO  : Running memsat_svm full
08/01/2012 19:52:01 : INFO  : Predicted Transmembrane (memsat_svm) ID '0755821a9535454d'
08/01/2012 19:52:02 : INFO  : Initialising fold library search
08/01/2012 19:52:04 : INFO  : Initialised search input
08/01/2012 19:52:05 : INFO  : Building Ensemble models
08/01/2012 19:52:07 : INFO  : Building hh.c1ltxA_.model.1.pdb
08/01/2012 19:52:15 : INFO  : Building hh.d1j7ja_.model.2.pdb
08/01/2012 19:52:21 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0755821a9535454d/hh.d1j7ja_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0755821a9535454d/d1j7ja_.2.pdb
08/01/2012 19:52:24 : INFO  : Building hh.d1kl7a_.model.3.pdb
08/01/2012 19:52:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0755821a9535454d/hh.d1kl7a_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0755821a9535454d/d1kl7a_.3.pdb
08/01/2012 19:52:32 : INFO  : Building c1ltxA_.1.pdb
08/01/2012 19:52:40 : INFO  : Building d1j7ja_.2.pdb
08/01/2012 19:52:48 : INFO  : Building d1kl7a_.3.pdb
08/01/2012 19:52:57 : INFO  : Building d1g9sa_.4.pdb
08/01/2012 19:53:06 : INFO  : Building c2j5bA_.5.pdb
08/01/2012 19:53:14 : INFO  : Building d1a3ca_.6.pdb
08/01/2012 19:53:21 : INFO  : Building d2igba1.7.pdb
08/01/2012 19:53:29 : INFO  : Building c1xuzA_.8.pdb
08/01/2012 19:53:36 : INFO  : Building c2pjuD_.9.pdb
08/01/2012 19:53:43 : INFO  : Building c1yfzA_.10.pdb
08/01/2012 19:53:50 : INFO  : Building d1yfza1.11.pdb
08/01/2012 19:53:58 : INFO  : Building c3efhB_.12.pdb
08/01/2012 19:54:06 : INFO  : Building d1nkta4.13.pdb
08/01/2012 19:54:14 : INFO  : Building c3o7mD_.14.pdb
08/01/2012 19:54:22 : INFO  : Building d2zdra2.15.pdb
08/01/2012 19:54:30 : INFO  : Building d1ufra_.16.pdb
08/01/2012 19:54:38 : INFO  : Building c3lubE_.17.pdb
08/01/2012 19:54:46 : INFO  : Building d1v7za_.18.pdb
08/01/2012 19:54:54 : INFO  : Building d1w30a_.19.pdb
08/01/2012 19:55:01 : INFO  : Building c2q5cA_.20.pdb
08/01/2012 19:55:35 : INFO  : Finished HH model building
08/01/2012 19:55:36 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 19:57:01 : INFO  : html domain output complete ID '0755821a9535454d'
08/01/2012 20:11:48 : INFO  : Run end  : Sun Jan  8 20:11:48 GMT 2012
