Phyre 2 Results for P24205

Email | l.a.kelley@imperial.ac.uk
Description | P24205
Date | Thu Jan 5 11:41:14 GMT 2012
Unique Job ID | 0755821a9535454d

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1ltxA_ |
|  | 64.7 | 14 | PDB header:transferase/protein binding Chain: A: PDB Molecule:rab geranylgeranyltransferase alpha subunit; PDBTitle: structure of rab escort protein-1 in complex with rab2 geranylgeranyl transferase and isoprenoid
2 | d1j7ja_ |
|  | 55.9 | 13 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
3 | d1kl7a_ |
|  | 55.3 | 6 | Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 | d1g9sa_ |
|  | 49.2 | 12 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
5 | c2j5bA_ |
|  | 44.6 | 11 | PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol
6 | d1a3ca_ |
|  | 42.3 | 10 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
7 | d2igba1 |
|  | 36.0 | 15 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
8 | c1xuzA_ |
|  | 34.3 | 10 | PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
9 | c2pjuD_ |
|  | 33.9 | 11 | PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr
10 | c1yfzA_ |
|  | 33.9 | 7 | PDB header:transferase Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: novel imp binding in feedback inhibition of hypoxanthine-guanine2 phosphoribosyltransferase from thermoanaerobacter tengcongensis
11 | d1yfza1 |
|  | 33.9 | 7 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
12 | c3efhB_ |
|  | 32.2 | 8 | PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1
13 | d1nkta4 |
|  | 31.3 | 12 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain
14 | c3o7mD_ |
|  | 31.3 | 7 | PDB header:transferase Chain: D: PDB Molecule:hypoxanthine phosphoribosyltransferase; PDBTitle: 1.98 angstrom resolution crystal structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-2) from bacillus anthracis str. 'ames3 ancestor'
15 | d2zdra2 |
|  | 29.0 | 11 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like
16 | d1ufra_ |
|  | 28.8 | 13 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
17 | c3lubE_ |
|  | 28.4 | 23 | PDB header:hydrolase Chain: E: PDB Molecule:putative creatinine amidohydrolase; PDBTitle: crystal structure of putative creatinine amidohydrolase2 (yp_211512.1) from bacteroides fragilis nctc 9343 at 2.11 a3 resolution
18 | d1v7za_ |
|  | 26.8 | 17 | Fold:Creatininase Superfamily:Creatininase Family:Creatininase
19 | d1w30a_ |
|  | 25.9 | 15 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
20 | c2q5cA_ |
|  | 24.3 | 9 | PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
21 | c3cwcB_ |
| not modelled | 24.1 | 8 | PDB header:transferase Chain: B: PDB Molecule:putative glycerate kinase 2; PDBTitle: crystal structure of putative glycerate kinase 2 from salmonella2 typhimurium lt2
22 | c3no4A_ |
| not modelled | 24.0 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:creatinine amidohydrolase; PDBTitle: crystal structure of a creatinine amidohydrolase (npun_f1913) from2 nostoc punctiforme pcc 73102 at 2.00 a resolution
23 | d1d8da_ |
| not modelled | 22.4 | 14 | Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase
24 | d1hgxa_ |
| not modelled | 22.4 | 11 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
25 | d1pzma_ |
| not modelled | 21.0 | 11 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
26 | d1l1qa_ |
| not modelled | 19.1 | 8 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
27 | d1wgla_ |
| not modelled | 18.6 | 11 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain
28 | c2ps3A_ |
| not modelled | 18.4 | 12 | PDB header:metal transport Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: structure and metal binding properties of znua, a2 periplasmic zinc transporter from escherichia coli
29 | d1a9xb1 |
| not modelled | 17.6 | 15 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:Carbamoyl phosphate synthetase, small subunit N-terminal domain Family:Carbamoyl phosphate synthetase, small subunit N-terminal domain
30 | c2dhyA_ |
| not modelled | 17.6 | 10 | PDB header:immune system Chain: A: PDB Molecule:cue domain-containing protein 1; PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1)
31 | c2ov3A_ |
| not modelled | 17.3 | 17 | PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein component of an abc PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound
32 | d1o60a_ |
| not modelled | 17.1 | 11 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase
33 | c3kb8A_ |
| not modelled | 17.0 | 9 | PDB header:transferase Chain: A: PDB Molecule:hypoxanthine phosphoribosyltransferase; PDBTitle: 2.09 angstrom resolution structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-1) from bacillus anthracis str. 'ames3 ancestor' in complex with gmp
34 | d1hrua_ |
| not modelled | 16.4 | 20 | Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like
35 | c2ywtA_ |
| not modelled | 16.1 | 7 | PDB header:transferase Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: crystal structure of hypoxanthine-guanine2 phosphoribosyltransferase with gmp from thermus3 thermophilus hb8
36 | d1d7ya2 |
| not modelled | 15.7 | 8 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains
37 | c2o1eB_ |
| not modelled | 15.4 | 10 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583
38 | d1jcua_ |
| not modelled | 15.3 | 21 | Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like
39 | d2h6fa1 |
| not modelled | 15.3 | 14 | Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase
40 | d1cv8a_ |
| not modelled | 15.2 | 11 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like
41 | d1gm5a4 |
| not modelled | 15.2 | 10 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain
42 | c3f6tA_ |
| not modelled | 15.1 | 15 | PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of aspartate aminotransferase (e.c. 2.6.1.1)2 (yp_194538.1) from lactobacillus acidophilus ncfm at 2.15 a3 resolution
43 | c3dl8B_ |
| not modelled | 14.9 | 11 | PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca
44 | c2cycB_ |
| not modelled | 14.3 | 7 | PDB header:ligase Chain: B: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with l-tyrosine2 from pyrococcus horikoshii
45 | d2obba1 |
| not modelled | 14.1 | 12 | Fold:HAD-like Superfamily:HAD-like Family:BT0820-like
46 | d1k7ja_ |
| not modelled | 13.9 | 25 | Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like
47 | c1keeH_ |
| not modelled | 13.5 | 15 | PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
48 | c3mioA_ |
| not modelled | 13.3 | 16 | PDB header:lyase Chain: A: PDB Molecule:3,4-dihydroxy-2-butanone 4-phosphate synthase; PDBTitle: crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase2 domain from mycobacterium tuberculosis at ph 6.00
49 | d1tksa_ |
| not modelled | 13.3 | 14 | Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
50 | c1tnoI_ |
| not modelled | 13.2 | 12 | PDB header:transferase Chain: I: PDB Molecule:geranylgeranyltransferase type i alpha subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a kkksktkcvim peptide derived from k-3 ras4b
51 | c2advB_ |
| not modelled | 13.0 | 23 | PDB header:hydrolase Chain: B: PDB Molecule:glutaryl 7- aminocephalosporanic acid acylase; PDBTitle: crystal structures of glutaryl 7-aminocephalosporanic acid acylase:2 mutational study of activation mechanism
52 | d1tuwa_ |
| not modelled | 12.9 | 22 | Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Polyketide synthesis cyclase
53 | d1p3qq_ |
| not modelled | 12.7 | 17 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain
54 | d1snna_ |
| not modelled | 12.5 | 13 | Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
55 | d1xdfa1 |
| not modelled | 12.5 | 18 | Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like
56 | c3m8yC_ |
| not modelled | 12.4 | 11 | PDB header:isomerase Chain: C: PDB Molecule:phosphopentomutase; PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation
57 | c1tf2A_ |
| not modelled | 12.4 | 11 | PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of seca:adp in an open conformation from2 bacillus subtilis
58 | c1fcuA_ |
| not modelled | 12.4 | 11 | PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase
59 | d1mn3a_ |
| not modelled | 12.2 | 18 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain
60 | d1fl2a2 |
| not modelled | 12.1 | 9 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains
61 | d1fcqa_ |
| not modelled | 11.8 | 11 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Bee venom hyaluronidase
62 | c1pzmB_ |
| not modelled | 11.7 | 11 | PDB header:transferase Chain: B: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: crystal structure of hgprt-ase from leishmania tarentolae in complex2 with gmp
63 | d1tc1a_ |
| not modelled | 11.5 | 9 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
64 | d2pjua1 |
| not modelled | 11.4 | 11 | Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like
65 | d1pyfa_ |
| not modelled | 11.2 | 8 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
66 | d1iuqa_ |
| not modelled | 11.1 | 22 | Fold:Glycerol-3-phosphate (1)-acyltransferase Superfamily:Glycerol-3-phosphate (1)-acyltransferase Family:Glycerol-3-phosphate (1)-acyltransferase
67 | d1g2qa_ |
| not modelled | 10.9 | 10 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
68 | c2h3oA_ |
| not modelled | 10.7 | 9 | PDB header:membrane protein Chain: A: PDB Molecule:merf; PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices
69 | d3pmga2 |
| not modelled | 10.5 | 8 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
70 | c2ns6A_ |
| not modelled | 10.3 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:mobilization protein a; PDBTitle: crystal structure of the minimal relaxase domain of moba2 from plasmid r1162
71 | d1ikpa3 |
| not modelled | 10.3 | 27 | Fold:Toxins' membrane translocation domains Superfamily:Exotoxin A, middle domain Family:Exotoxin A, middle domain
72 | d1v71a1 |
| not modelled | 9.9 | 11 | Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
73 | c2pe4A_ |
| not modelled | 9.7 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-1; PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis
74 | d2pw6a1 |
| not modelled | 9.7 | 7 | Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like
75 | d1xrsa_ |
| not modelled | 9.6 | 19 | Fold:TIM beta/alpha-barrel Superfamily:Cobalamin (vitamin B12)-dependent enzymes Family:D-lysine 5,6-aminomutase alpha subunit, KamD
76 | c3ktsA_ |
| not modelled | 9.6 | 12 | PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365
77 | d1iyjb4 |
| not modelled | 9.5 | 33 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
78 | c3iraA_ |
| not modelled | 9.3 | 25 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: the crystal structure of one domain of the conserved protein from2 methanosarcina mazei go1
79 | d1nj1a2 |
| not modelled | 9.1 | 13 | Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS
80 | d2aeea1 |
| not modelled | 8.8 | 4 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
81 | c2lc0A_ |
| not modelled | 8.8 | 10 | PDB header:protein binding Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: rv0020c_nter structure
82 | d2pi8a1 |
| not modelled | 8.7 | 11 | Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:MLTA-like
83 | d1vzya2 |
| not modelled | 8.6 | 17 | Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like
84 | d1mkya3 |
| not modelled | 8.6 | 6 | Fold:Alpha-lytic protease prodomain-like Superfamily:Probable GTPase Der, C-terminal domain Family:Probable GTPase Der, C-terminal domain
85 | d1k4ia_ |
| not modelled | 8.5 | 16 | Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
86 | c2qx5B_ |
| not modelled | 8.2 | 29 | PDB header:transport protein Chain: B: PDB Molecule:nucleoporin nic96; PDBTitle: structure of nucleoporin nic96
87 | c3dezA_ |
| not modelled | 8.2 | 8 | PDB header:transferase Chain: A: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: crystal structure of orotate phosphoribosyltransferase from2 streptococcus mutans
88 | c2eqaA_ |
| not modelled | 8.0 | 21 | PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii
89 | c2jcyA_ |
| not modelled | 7.9 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis
90 | c3koxA_ |
| not modelled | 7.8 | 16 | PDB header:metal binding protein Chain: A: PDB Molecule:d-ornithine aminomutase e component; PDBTitle: crystal structure of ornithine 4,5 aminomutase in complex with 2,4-2 diaminobutyrate (anaerobic)
91 | c3cx3A_ |
| not modelled | 7.8 | 11 | PDB header:metal binding protein Chain: A: PDB Molecule:lipoprotein; PDBTitle: crystal structure analysis of the streptococcus pneumoniae2 adcaii protein
92 | c3khsB_ |
| not modelled | 7.7 | 11 | PDB header:hydrolase Chain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of grouper iridovirus purine nucleoside2 phosphorylase
93 | c1r6uB_ |
| not modelled | 7.6 | 8 | PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of an active fragment of human tryptophanyl-trna2 synthetase with cytokine activity
94 | d1nj8a2 |
| not modelled | 7.6 | 17 | Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS
95 | c2bnlE_ |
| not modelled | 7.5 | 12 | PDB header:stress-response Chain: E: PDB Molecule:modulator protein rsbr; PDBTitle: the structure of the n-terminal domain of rsbr
96 | c3g8rA_ |
| not modelled | 7.4 | 12 | PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
97 | c3l6gA_ |
| not modelled | 7.4 | 12 | PDB header:glycine betaine-binding protein Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding PDBTitle: crystal structure of lactococcal opuac in its open conformation
98 | d1p17b_ |
| not modelled | 7.4 | 9 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
99 | c3ie5A_ |
| not modelled | 7.3 | 20 | PDB header:plant protein, biosynthetic protein Chain: A: PDB Molecule:phenolic oxidative coupling protein hyp-1; PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum2 (st john's wort) involved in hypericin biosynthesis