268 d1nd4a_ Probab=99.05   E-value=6.6e-09  Score=77.48  Aligned_columns=189  Identities=19%

Q ss_pred             HHHHHHHHCCCCCCCC-CEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             8899864053422112-217899889878885899997377768888856998999999999998876408928899999
Q batch____       118 VEAWFDDFEIKPLASA-SIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREY  196 (546)
Q Consensus       118 ~~~~F~~f~~~plasa-SigQVhrA~l~~~G~~VaVKV~rP~i~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~iv~e~  196 (546)
                      |.+....++-+|+..| |-++|||.... +|+.|++|+.+++-...+.....+++.+..                     
T Consensus         6 ~~~~l~g~~~~~v~~G~s~~~v~rv~~~-~~~~~~lk~~~~~~~~~~~~E~~~l~~L~~---------------------   63 (255)
T d1nd4a_           6 WVERLFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGALNELQDEAARLSWLAT---------------------   63 (255)
T ss_dssp             GTTTTTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSCTTSCHHHHHHHHHHHHT---------------------
T ss_pred             HHHHHCCCEEEEECCCCCCCEEEEEEEC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHH---------------------
T ss_conf             8887379605870588868617999957-996899982888897899999999999986---------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECEECCC--CCCCEEEEECCCCCEEHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             99889861079999999999995057995895401147--8985589872688800899982467898989999999999
Q batch____       197 EKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPD--YCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQV  274 (546)
Q Consensus       197 ~~~~~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~vLvmE~i~G~~l~~~~~~~~~~~~~~~l~~~~~~~  274 (546)
                                                 ..+.+|+++..  .....+++|++++|.++      ..........+..+.+ 
T Consensus        64 ---------------------------~~~~vP~~~~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~-  109 (255)
T d1nd4a_          64 ---------------------------TGVPCAAVLDVVTEAGRDWLLLGEVPGQDL------LSSHLAPAEKVSIMAD-  109 (255)
T ss_dssp             ---------------------------TTCCBCCEEEEEECSSCEEEEEECCSSEET------TTSCCCHHHHHHHHHH-
T ss_pred             ---------------------------CCCCCCCCCCCCCCCCCEEEEEECCCCCCC------CCCCCCHHHHHHHHHH-
T ss_conf             ---------------------------499887120343335521687511457754------4355696999999999-


Q ss_pred             HHHHHHHC----------------------------------------------------------CHHHCCCCHHHEEE
Q ss_conf             99999751----------------------------------------------------------73003799477686
Q batch____       275 FFTQVFRD----------------------------------------------------------SFFHADMHPGNIFV  296 (546)
Q Consensus       275 ~l~~~~~~----------------------------------------------------------G~~HrD~hPgNIlv  296 (546)
                      .+.++|..                                                          +++|+|+||+||++
T Consensus       110 ~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nil~  189 (255)
T d1nd4a_         110 AMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMV  189 (255)
T ss_dssp             HHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEE
T ss_conf             99998447743388765422102678887776641100146234330299999999843775168489816558986135


Q ss_pred             ECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             037888975999955871105889998778788977619999999999852888844498999999999840247
Q batch____       297 SYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF  371 (546)
Q Consensus       297 ~~~~~~dg~i~liDFG~~~~l~~~~r~~~~~~~~~~~~~d~~~~~~~~~~~g~~~~~~D~~~l~~~l~~ll~~~~  371 (546)
                      +    +++.+.+|||+.++.-++..  -+..+...+.....+...+.+.+ +......|...+.  .|.++..++
T Consensus       190 ~----~~~~~~iIDwe~~~~gd~~~--Dla~~~~~~~~~~~~~~~~~~l~-~yg~~~~d~~~l~--~y~ll~~f~  255 (255)
T d1nd4a_         190 E----NGRFSGFIDCGRLGVADRYQ--DIALATRDIAEELGGEWADRFLV-LYGIAAPDSQRIA--FYRLLDEFF  255 (255)
T ss_dssp             E----TTEEEEECCCTTCEEEETHH--HHHHHHHHHHHHHCHHHHHHHHH-HHTCSSCCHHHHH--HHHHHGGGC
T ss_pred             C----CCCEEEEEECCCCCCCCHHH--HHHHHHHHHCCCCCHHHHHHHHH-HCCCCCCCHHHHH--HHHHHHHHC
T ss_conf             3----89638998177034689999--99999986114799999999998-6088888889999--998767409