Phyre 2 alignment of P64604 with d2vv5a1

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Job Description | P64604
Confidence | 6.47% | Date | Thu Jan 5 12:09:51 GMT 2012
Rank | 18 | Aligned Residues | 21
% Identity | 33% | Template | d2vv5a1
SCOP info | Sm-like fold | Sm-like ribonucleoproteins | Mechanosensitive channel protein MscS (YggB), middle domain
Resolution | 3.45

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | K | A | R | S | P | V | S | I | G | G | V | V | V | G | R | V | A | D | I | T | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Sequence |  | F | R | A | G | E | Y | V | D | L | G | G | V | A | . | G | T | V | L | S | V | Q | I
Template Known Secondary structure |  | S |  | T | T |  |  |  |  | S | S | S |  |  | . |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |  | . | . | . | . | . | . | . | 150

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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