15/01/2012 04:30:20 : INFO  : Run start: Sun Jan 15 04:30:19 GMT 2012
15/01/2012 04:30:23 : INFO  : Initialised job
15/01/2012 04:30:23 : INFO  : Renaming log file 'phyre2_20120115_043019.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/072527d03382ef2e/phyre_20120115_043019.log'
15/01/2012 04:30:24 : INFO  : Initialised job:
Sequence
>batch____
MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI
GGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFED
PELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVG
TTK

15/01/2012 04:30:25 : INFO  : Checked sequence
15/01/2012 04:30:26 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 04:30:27 : INFO  : PSI-BLAST 3 iterations
15/01/2012 04:31:38 : INFO  : PSI-BLAST 5 iterations
15/01/2012 04:32:57 : INFO  : Finished PSI-BLAST
15/01/2012 04:32:58 : INFO  : Running Buildali to generate a3m file
15/01/2012 04:38:11 : INFO  : Converting to HMM
15/01/2012 04:38:12 : INFO  : Calibrating HMM
15/01/2012 04:38:21 : INFO  : Searching HMM database
15/01/2012 04:42:32 : INFO  : Finished buildali
15/01/2012 04:42:33 : INFO  : Predicting secondary structure
15/01/2012 04:42:38 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 04:42:39 : INFO  : Predicting Disordered regions
15/01/2012 04:42:40 : INFO  : Predicted Disorder (Disopred)
15/01/2012 04:42:41 : INFO  : Running memsat_svm check
15/01/2012 04:44:29 : INFO  : Running memsat_svm full
15/01/2012 04:49:19 : INFO  : Predicted Transmembrane (memsat_svm) ID '072527d03382ef2e'
15/01/2012 04:49:20 : INFO  : Initialising fold library search
15/01/2012 04:49:23 : INFO  : Initialised search input
15/01/2012 04:49:26 : INFO  : Building Ensemble models
15/01/2012 04:49:29 : INFO  : Building hh.d1v5va1.model.1.pdb
15/01/2012 04:49:43 : INFO  : Building hh.c2j5uB_.model.2.pdb
15/01/2012 04:49:52 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/072527d03382ef2e/hh.c2j5uB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/072527d03382ef2e/c2j5uB_.2.pdb
15/01/2012 04:49:55 : INFO  : Building d1v5va1.1.pdb
15/01/2012 04:50:05 : INFO  : Building c2j5uB_.2.pdb
15/01/2012 04:50:14 : INFO  : Building c1v5vA_.3.pdb
15/01/2012 04:50:23 : INFO  : Building c2qf4A_.4.pdb
15/01/2012 04:50:31 : INFO  : Building d1pj5a1.5.pdb
15/01/2012 04:50:39 : INFO  : Building d1wosa1.6.pdb
15/01/2012 04:50:46 : INFO  : Building c1yx2B_.7.pdb
15/01/2012 04:50:54 : INFO  : Building c1cz5A_.8.pdb
15/01/2012 04:51:03 : INFO  : Building c2k6zA_.9.pdb
15/01/2012 04:51:11 : INFO  : Building d1h9ra2.10.pdb
15/01/2012 04:51:19 : INFO  : Building d1x9la_.11.pdb
15/01/2012 04:51:27 : INFO  : Building c3htrB_.12.pdb
15/01/2012 04:51:35 : INFO  : Building c1t5eB_.13.pdb
15/01/2012 04:51:42 : INFO  : Building d1nnxa_.14.pdb
15/01/2012 04:51:50 : INFO  : Building d1vf7a_.15.pdb
15/01/2012 04:51:58 : INFO  : Building d2cp6a1.16.pdb
15/01/2012 04:52:06 : INFO  : Building d1gtra1.17.pdb
15/01/2012 04:52:15 : INFO  : Building d2vv5a1.18.pdb
15/01/2012 04:52:24 : INFO  : Building c1worA_.19.pdb
15/01/2012 04:52:33 : INFO  : Building c3tfhB_.20.pdb
15/01/2012 04:53:08 : INFO  : Finished HH model building
15/01/2012 04:53:09 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 04:54:48 : INFO  : html domain output complete ID '072527d03382ef2e'
15/01/2012 04:58:41 : INFO  : Run end  : Sun Jan 15 04:58:41 GMT 2012
