Phyre 2 alignment of P64604 with c1t5eB_

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Job Description | P64604
Confidence | 7.76% | Date | Thu Jan 5 12:09:51 GMT 2012
Rank | 13 | Aligned Residues | 27
% Identity | 22% | Template | c1t5eB_
PDB info | PDB header:transport protein | Chain: B: PDB Molecule:multidrug resistance protein mexa; | PDBTitle: the structure of mexa
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |  | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | T | E | P | T | Y | T | L | Y | A | T | F | D | N | I | G | G | . | L | K | A | R | S | P | V | S | I | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | G | T | G | S | V | T | I | R | A | V | F | P | N | P | N | N | E | L | L | P | G | M | F | V | H | A | Q
Template Known Secondary structure |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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