20 c1ynpA_ Probab=100.00  E-value=0  Score=353.54  Aligned_columns=269  Identities=27%

Q ss_pred             CCCEEEC-CCCCEECCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf             8746878-899797504065044688899989999999999985998799700318818999999861045755999720
Q batch____         2 QQKMIQF-SGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSK   80 (284)
Q Consensus         2 ~~~~~~l-~~G~~vs~iglG~~~~~~~~~~~~~~~~~i~~Al~~Gin~fDTA~~Yg~g~~E~~lg~~l~~~~~~~~~~t~   80 (284)
                      .|||.+| ++|++||+||||||+++   .+++++.++|++|+++|||+||||+.||+|.+|+.+|++++..+..++++++
T Consensus         1 ~M~~r~lG~tg~~vs~lglGt~~~g---~~~~~~~~~l~~A~~~Gin~fDTA~~Yg~g~sE~~lG~~l~~~~~~~~~~~~   77 (283)
T c1ynpA_           1 HMKKRQLGTSDLHVSELGFGCMSLG---TDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATK   77 (283)
T ss_dssp             CCCEEECTTSSCEEESBCBCSCCCC---SCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTTCGGGCEEEEE
T ss_pred             CCCCCCCCCCCCEECCEEEEECCCC---CCHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHHHCCCEEEECCC
T ss_conf             9753347699865340207208898---7889999999999986998899710318984489999998404876997267


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             2567678899999999999871988101203213788-788889999999998688401450477899999999851788
Q batch____        81 VYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGS-FAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGN  159 (284)
Q Consensus        81 ~~~~~~~~~~~~~~~~~SL~rL~~d~iDl~~lH~~~~-~~~~~~~~~l~~l~~~Gki~~iGvs~~~~~~~~~~~~~~~~~  159 (284)
                      .     ....+++++++||++|+++|+|++++|+++. .+..+.++++++++++|+|++||+|+++..++.+....   .
T Consensus        78 ~-----~~~~i~~~~e~sl~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~g~i~~iG~s~~~~~~~~~~~~~---~  149 (283)
T c1ynpA_          78 V-----SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKR---S  149 (283)
T ss_dssp             C-----CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHH---S
T ss_pred             C-----CHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHCCC---C
T ss_conf             5-----3799999999999970898432021006887889688999999999843047131477888999983133---5


Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC----------HHHHHHHHHHCCCHHHHHHH
Q ss_conf             61476430585432245889999997198443321012532224223462----------79999998838998999999
Q batch____       160 QCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKN----------AVVNEIAHAHNISAAQVLLA  229 (284)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~g~~~~~~~~~~----------~~l~~~a~~~~~t~~q~al~  229 (284)
                      .++++|+.||++++..+..+ ++|+++++++++|++++.|.+........          ..+..++.++++|++|+||+
T Consensus       150 ~~~~~q~~~n~~~~~~~~~l-~~~~~~g~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~s~~q~al~  228 (283)
T c1ynpA_         150 NIVSIMMQYSILDRRPEEWF-PLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYRYDELKLLRESLPTDRPLHELALQ  228 (283)
T ss_dssp             CCCEEEEECBTTBCGGGGGH-HHHHHTTCEEEEECTTGGGTTSSSCCCTTCCBTTBCHHHHHHHHHHSCSSSCHHHHHHH
T ss_pred             CCEEEEEEECCCCCCCHHHH-HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             71288871036756747889-99998498279800023531247867675443210101389999998709998999999


Q ss_pred             HHHHCCCC-EEECCCCCHHHHHHHHHHCCC-CCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99838995-997489899999998985199-998899999986436778877888
Q batch____       230 WVISHQGV-MAIPKAATIAHVQQNAAVLEV-ELSSAELAMLDKAYPAPKGKTALD  282 (284)
Q Consensus       230 ~~ls~p~v-~vi~G~~~~~~l~enl~a~~~-~Lt~ee~~~i~~~~~~~~~~~~~~  282 (284)
                      |+|++|.+ +||+|+++++||+||++++++ +||+||+++|++++.++.=+...|
T Consensus       229 ~~l~~~~v~~vi~G~~~~~~l~enl~a~~~~~Lt~ee~~~i~~~~~~~~~~~~~~  283 (283)
T c1ynpA_         229 YCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAVYEQHRE  283 (283)
T ss_dssp             HHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHHHSCCCCCCSSCC
T ss_pred             HHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             9984899409961799999999989861988889899999996411024675689