BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (282 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16... 466 e-130 UniRef50_B2N4J2 HTH-type transcriptional activator RhaR n=2 Tax=... 416 e-115 UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax... 358 8e-98 UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax... 300 4e-80 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 258 1e-67 UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=... 253 5e-66 UniRef50_UPI000197C3B0 transcriptional regulator, AraC family pr... 187 4e-46 UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=... 171 2e-41 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 167 3e-40 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 159 9e-38 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 152 2e-35 UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=T... 148 2e-34 UniRef50_UPI000197C3AF transcriptional activator RhaS n=1 Tax=Pr... 139 8e-32 UniRef50_Q2NRC4 Putative L-rhamnose operon transcriptional activ... 139 2e-31 UniRef50_C6DJR4 HTH-type transcriptional activator rhaS n=40 Tax... 138 2e-31 UniRef50_C6C3E6 Transcriptional regulator, AraC family n=8 Tax=E... 137 6e-31 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 130 4e-29 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 127 3e-28 UniRef50_Q65Q31 HTH-type transcriptional activator rhaS n=1 Tax=... 126 1e-27 UniRef50_C4LCV2 Transcriptional regulator, AraC family n=1 Tax=T... 123 8e-27 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 119 1e-25 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 119 2e-25 UniRef50_Q1ZN25 L-rhamnose operon regulatory protein n=2 Tax=Vib... 117 4e-25 UniRef50_A6AXJ0 HTH-type transcriptional activator RhaS n=2 Tax=... 117 4e-25 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 116 1e-24 UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=V... 115 2e-24 UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Kle... 108 2e-22 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 97 4e-19 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 96 2e-18 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 95 3e-18 UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Pae... 89 1e-16 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 89 2e-16 UniRef50_C0AEA5 L-rhamnose operon transcriptional activator (Fra... 89 2e-16 UniRef50_Q7MG26 AraC-type DNA-binding domain-containing protein ... 88 3e-16 UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Cl... 88 3e-16 UniRef50_A4SS82 Transcriptional regulator, AraC family n=2 Tax=A... 86 1e-15 UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=... 85 2e-15 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 85 3e-15 UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=V... 83 1e-14 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 82 2e-14 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 82 2e-14 UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaeros... 81 3e-14 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 81 3e-14 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 80 5e-14 UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=... 80 6e-14 UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=C... 80 6e-14 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 80 7e-14 UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostri... 80 8e-14 UniRef50_UPI0001C35DF5 transcriptional regulator, AraC family pr... 79 2e-13 UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=... 79 2e-13 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 77 5e-13 UniRef50_C0YSE7 AraC family transcriptional regulator n=1 Tax=Ch... 77 6e-13 UniRef50_UPI00016C4EB1 probable transcription regulator n=1 Tax=... 77 6e-13 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 77 6e-13 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 75 2e-12 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 75 3e-12 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 75 4e-12 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 74 4e-12 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 74 4e-12 UniRef50_B9XB63 Transcriptional regulator, AraC family n=1 Tax=b... 74 4e-12 UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=P... 74 5e-12 UniRef50_A4EK09 Transcriptional regulator, AraC family protein n... 74 5e-12 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 73 9e-12 UniRef50_A0Y392 Transcriptional regulator, AraC family protein n... 73 1e-11 UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaeros... 73 1e-11 UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=P... 73 1e-11 UniRef50_C0CZ81 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_D2QLM0 Transcriptional regulator, AraC family n=1 Tax=S... 72 1e-11 UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 T... 72 1e-11 UniRef50_D2B8S3 Transcriptional regulator containing an amidase ... 72 2e-11 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 72 2e-11 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 72 2e-11 UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus ... 72 2e-11 UniRef50_Q98JA7 Probable transcriptional regulator n=1 Tax=Mesor... 72 3e-11 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 71 3e-11 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 71 3e-11 UniRef50_A6LDH9 Transcriptional regulator n=5 Tax=Bacteroidales ... 71 3e-11 UniRef50_Q8KL73 Putative transcriptional regulator protein, AraC... 71 4e-11 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 71 4e-11 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 71 4e-11 UniRef50_C9NPJ0 Transcriptional regulator AraC family n=1 Tax=Vi... 71 4e-11 UniRef50_D1TC99 Putative transcriptional regulator n=1 Tax=Burkh... 71 5e-11 UniRef50_UPI0001969689 hypothetical protein BACCELL_01403 n=1 Ta... 71 5e-11 UniRef50_C0CYV6 Putative uncharacterized protein n=2 Tax=Clostri... 71 5e-11 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 71 5e-11 UniRef50_C6D075 Transcriptional regulator, AraC family n=1 Tax=P... 71 5e-11 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 71 5e-11 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 70 7e-11 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 70 7e-11 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 70 7e-11 UniRef50_P54722 Uncharacterized HTH-type transcriptional regulat... 70 7e-11 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 70 7e-11 UniRef50_C4Z0X2 Two-component system, response regulator YesN n=... 70 8e-11 UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photoba... 70 8e-11 UniRef50_C4Z6Z4 Two-component system, response regulator YesN n=... 70 8e-11 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 70 9e-11 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 70 9e-11 UniRef50_C0A9P7 Transcriptional regulator, AraC family n=1 Tax=O... 70 9e-11 UniRef50_C6BWQ4 Transcriptional regulator, AraC family n=1 Tax=D... 70 1e-10 UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID... 70 1e-10 UniRef50_C7IMV0 Transcriptional regulator, AraC family n=1 Tax=C... 70 1e-10 UniRef50_B8I029 Transcriptional regulator, AraC family n=2 Tax=C... 69 1e-10 UniRef50_C4G4K9 Putative uncharacterized protein n=1 Tax=Abiotro... 69 1e-10 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 69 1e-10 UniRef50_D2QJS7 Transcriptional regulator, AraC family n=1 Tax=S... 69 1e-10 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 69 1e-10 UniRef50_C2DI33 AraC family transcriptional regulator n=31 Tax=E... 69 1e-10 UniRef50_UPI0000DAF41A hypothetical protein PaerPA_01003251 n=1 ... 69 1e-10 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 69 1e-10 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 69 2e-10 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 69 2e-10 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 69 2e-10 UniRef50_A8U727 YfiF n=1 Tax=Carnobacterium sp. AT7 RepID=A8U727... 69 2e-10 UniRef50_A7M0D3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC 8... 69 2e-10 UniRef50_UPI0001C36A4E response regulator receiver protein n=1 T... 69 2e-10 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 69 2e-10 UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P... 69 2e-10 UniRef50_D1NB59 Transcriptional regulator, AraC family n=1 Tax=V... 69 2e-10 UniRef50_B2JUY8 Transcriptional regulator, AraC family n=8 Tax=B... 69 2e-10 UniRef50_C9ABS1 Helix-turn-helix domain-containing protein n=3 T... 69 2e-10 UniRef50_D1CHN4 Transcriptional regulator, AraC family n=1 Tax=T... 69 2e-10 UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=... 69 3e-10 UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ... 69 3e-10 UniRef50_D2PMT4 Transcriptional regulator, AraC family n=1 Tax=K... 68 3e-10 UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 68 3e-10 UniRef50_D1N3N0 Transcriptional regulator, AraC family n=1 Tax=V... 68 3e-10 UniRef50_A3HVZ7 Transcriptional regulator n=1 Tax=Algoriphagus s... 68 3e-10 UniRef50_B1L1U7 Transcriptional regulator, AraC family n=6 Tax=C... 68 3e-10 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 68 4e-10 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 68 4e-10 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 68 4e-10 UniRef50_A8KXI5 Transcriptional regulator, AraC family n=73 Tax=... 68 4e-10 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 68 4e-10 UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=E... 68 4e-10 UniRef50_A6NS82 Putative uncharacterized protein n=1 Tax=Bactero... 68 4e-10 UniRef50_B6VMW0 Similar to arac-family transcriptional regulator... 68 4e-10 UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronoba... 68 4e-10 UniRef50_B7V806 Probable transcriptional regulator n=6 Tax=Pseud... 68 4e-10 UniRef50_B0A6F6 Putative uncharacterized protein n=1 Tax=Clostri... 67 5e-10 UniRef50_Q7NW89 Probable transcriptional regulator, AraC family ... 67 5e-10 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 67 5e-10 UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobaci... 67 5e-10 UniRef50_B5JP43 Transcriptional regulator, AraC family protein n... 67 5e-10 UniRef50_B4CZ42 Transcriptional regulator, AraC family n=1 Tax=C... 67 6e-10 UniRef50_A7IDZ1 Helix-turn-helix-domain containing protein AraC ... 67 6e-10 UniRef50_Q8AB44 Sensor protein n=5 Tax=Bacteria RepID=Q8AB44_BACTN 67 6e-10 UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecali... 67 6e-10 UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostri... 67 6e-10 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 67 6e-10 UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillu... 67 7e-10 UniRef50_C4FX77 Putative uncharacterized protein n=1 Tax=Catonel... 67 7e-10 UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostri... 67 7e-10 UniRef50_D0PR01 Sensor protein n=1 Tax=Flammeovirga yaeyamensis ... 67 7e-10 UniRef50_UPI0001C359BB two component transcriptional regulator, ... 67 7e-10 UniRef50_C0X774 Ada regulatory protein/6-O-methylguanine-DNA met... 67 8e-10 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 67 8e-10 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 67 8e-10 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 67 8e-10 UniRef50_C5D0H4 Transcriptional regulator, AraC family n=1 Tax=V... 67 8e-10 UniRef50_A5ZM23 Putative uncharacterized protein n=1 Tax=Ruminoc... 67 8e-10 UniRef50_C1RHJ1 DNA-binding domain-containing protein, AraC-type... 67 9e-10 UniRef50_Q71VU1 Transcriptional regulator, AraC family n=21 Tax=... 66 1e-09 UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacteriu... 66 1e-09 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 66 1e-09 UniRef50_A1JKC5 AraC-family transcriptional regulator n=5 Tax=En... 66 1e-09 UniRef50_A4BFF7 Putative uncharacterized protein n=1 Tax=Reineke... 66 1e-09 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 66 1e-09 UniRef50_Q46N77 Transcriptional regulator, AraC family n=1 Tax=R... 66 1e-09 UniRef50_UPI00017885E1 two component transcriptional regulator, ... 66 1e-09 UniRef50_Q393N4 Transcriptional regulator, AraC family with amid... 66 1e-09 UniRef50_Q7UVE6 Probable transcription regulator n=1 Tax=Rhodopi... 66 1e-09 UniRef50_UPI000196B709 hypothetical protein CATMIT_00139 n=1 Tax... 66 2e-09 UniRef50_B5CYA2 Sensor protein n=1 Tax=Bacteroides plebeius DSM ... 66 2e-09 UniRef50_C1DF31 Transcriptional regulator, AraC family n=2 Tax=P... 66 2e-09 UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostri... 66 2e-09 UniRef50_A9E084 Transcriptional regulatory protein, AraC-type n=... 66 2e-09 UniRef50_A7GDS9 Transcriptional regulator, AraC family n=6 Tax=C... 65 2e-09 UniRef50_A8U8W0 Putative uncharacterized protein n=1 Tax=Carnoba... 65 2e-09 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 65 2e-09 UniRef50_C6CSB2 Transcriptional regulator, AraC family n=1 Tax=P... 65 2e-09 UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n... 65 2e-09 UniRef50_A6NTA8 Putative uncharacterized protein n=1 Tax=Bactero... 65 2e-09 UniRef50_Q89EV8 Transcriptional regulatory protein n=1 Tax=Brady... 65 2e-09 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 65 2e-09 UniRef50_Q13JD5 Transcriptional regulator, AraC family n=1 Tax=B... 65 2e-09 UniRef50_C6CUK7 Transcriptional regulator, AraC family n=1 Tax=P... 65 2e-09 UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacilla... 65 2e-09 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 65 2e-09 UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P... 65 2e-09 UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus c... 65 3e-09 UniRef50_UPI0001C362BB response regulator receiver protein n=1 T... 65 3e-09 UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=A... 65 3e-09 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 65 3e-09 UniRef50_C2HBK3 AraC family response regulator n=19 Tax=Enteroco... 65 3e-09 UniRef50_Q39M95 Two component transcriptional regulator, AraC fa... 65 3e-09 UniRef50_A7B093 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 3e-09 UniRef50_D2QPY1 Transcriptional regulator, AraC family n=1 Tax=S... 65 3e-09 UniRef50_A6BJV8 Putative uncharacterized protein n=3 Tax=Lachnos... 65 4e-09 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 65 4e-09 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 65 4e-09 UniRef50_A8RL03 Putative uncharacterized protein n=1 Tax=Clostri... 65 4e-09 UniRef50_Q5L870 Sensor protein n=4 Tax=Bacteroides RepID=Q5L870_... 65 4e-09 UniRef50_B8IDB6 Transcriptional regulator, AraC family n=6 Tax=R... 65 4e-09 UniRef50_A9BSQ5 Transcriptional regulator, AraC family n=1 Tax=D... 65 4e-09 UniRef50_C0AAT3 AraC-type DNA-binding domain-containing protein-... 65 4e-09 UniRef50_A8UP06 Sensor protein n=1 Tax=Flavobacteriales bacteriu... 65 4e-09 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 64 4e-09 UniRef50_A9KN27 Transcriptional regulator, AraC family n=3 Tax=B... 64 4e-09 UniRef50_A3NPT2 Transcriptional regulator, AraC family n=35 Tax=... 64 4e-09 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 64 5e-09 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 64 5e-09 UniRef50_B5HDN5 Predicted protein n=4 Tax=Actinomycetales RepID=... 64 5e-09 UniRef50_A6KXT8 Sensor protein n=10 Tax=Bacteroides RepID=A6KXT8... 64 5e-09 UniRef50_A7B0G0 Putative uncharacterized protein n=1 Tax=Ruminoc... 64 5e-09 UniRef50_UPI000178A004 two component transcriptional regulator, ... 64 5e-09 UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=P... 64 5e-09 UniRef50_Q5WC89 AraC/XylS family transcriptional regulator n=1 T... 64 5e-09 UniRef50_A1B241 Transcriptional regulator, AraC family n=1 Tax=P... 64 5e-09 UniRef50_D2LWT4 Transcriptional regulator, AraC family n=1 Tax=B... 64 5e-09 UniRef50_A7AAX3 Sensor protein n=2 Tax=Parabacteroides merdae AT... 64 5e-09 UniRef50_C6CV61 Two component transcriptional regulator, AraC fa... 64 5e-09 UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n... 64 6e-09 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_C9L8Z4 Transcriptional regulator, AraC family n=2 Tax=C... 64 6e-09 UniRef50_UPI0001C35B7C two-component system, response regulator ... 64 6e-09 UniRef50_UPI0001C34E2F two component transcriptional regulator, ... 64 6e-09 UniRef50_D2B3G2 Transcriptional regulator, AraC family n=3 Tax=A... 64 6e-09 UniRef50_C0D0A3 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_C7PEC1 Transcriptional regulator, AraC family n=1 Tax=C... 64 6e-09 UniRef50_C7CJM3 Transcriptional regulator, AraC family n=6 Tax=P... 64 6e-09 UniRef50_B8CZL9 Response regulator receiver protein n=1 Tax=Halo... 64 6e-09 UniRef50_C6D742 Transcriptional regulator, AraC family n=1 Tax=P... 64 7e-09 UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC... 64 7e-09 UniRef50_Q04C99 Transcriptional regulator, AraC family n=2 Tax=L... 64 7e-09 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 64 7e-09 UniRef50_C7H9U4 Transcriptional regulatory protein (Fragment) n=... 64 7e-09 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 64 7e-09 UniRef50_C6CVN2 Transcriptional regulator, AraC family n=1 Tax=P... 64 7e-09 UniRef50_D1U5Q1 Transcriptional regulator, AraC family n=1 Tax=D... 64 7e-09 UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri... 64 8e-09 UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 ... 64 8e-09 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 64 8e-09 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 63 9e-09 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 63 9e-09 UniRef50_C6CWB0 Two component transcriptional regulator, AraC fa... 63 9e-09 UniRef50_Q1YTA5 Putative AraC family transcriptional regulator n... 63 9e-09 UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp... 63 9e-09 UniRef50_B4CX13 Transcriptional regulator, AraC family n=1 Tax=C... 63 9e-09 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 63 9e-09 >UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16 Tax=Enterobacteriaceae RepID=C0Q3L5_SALPC Length = 322 Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust. Identities = 217/271 (80%), Positives = 236/271 (87%) Query: 12 FFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 FF +QQAV VADRYPQDVFAEHTH+FCELV+VWRGNGLHVLN+RPYRITRGDLFYI A+ Sbjct: 52 FFTDEQQAVTVADRYPQDVFAEHTHEFCELVMVWRGNGLHVLNERPYRITRGDLFYIRAE 111 Query: 72 DKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 DKHSY SVNDLVLQNIIYCPERLKLN++WQ IPGF + PHWRLGSMGM QARQVI Sbjct: 112 DKHSYTSVNDLVLQNIIYCPERLKLNVNWQAMIPGFQGAQWHPHWRLGSMGMNQARQVIN 171 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKS 191 QLEHES+ P ANEMAELLFGQLVM L RHRY +D LP TS ETLLDKLIT LA SL+ Sbjct: 172 QLEHESNGRDPLANEMAELLFGQLVMTLKRHRYATDDLPTTSRETLLDKLITALANSLEC 231 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 PFALD FC + CSERVLRQQFR QTGMTINQYLRQVR+CHAQYLLQHS L++S+IS +C Sbjct: 232 PFALDAFCQQEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQC 291 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 GFEDSNYFSVVFTRETGMTPSQWRHL++Q D Sbjct: 292 GFEDSNYFSVVFTRETGMTPSQWRHLSNQSD 322 >UniRef50_B2N4J2 HTH-type transcriptional activator RhaR n=2 Tax=Enterobacteriaceae RepID=B2N4J2_ECOLX Length = 199 Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/199 (99%), Positives = 199/199 (100%) Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 +QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF Sbjct: 1 MQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 60 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS Sbjct: 61 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 120 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF Sbjct: 121 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 180 Query: 264 TRETGMTPSQWRHLNSQKD 282 TRETGMTPSQWRHLNSQKD Sbjct: 181 TRETGMTPSQWRHLNSQKD 199 >UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax=Enterobacteriaceae RepID=RHAR_ENTS8 Length = 283 Score = 358 bits (920), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 176/275 (64%), Positives = 201/275 (73%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 MA QL L K DFFA+ Q V VADRYPQ+VFAEHTH+FCELV+VWRGNGLHVLNDRPYRI Sbjct: 1 MASQLVLRKADFFATPTQPVVVADRYPQNVFAEHTHEFCELVLVWRGNGLHVLNDRPYRI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GDLFYI A+D+HSY SVNDLVL NIIYCPERL+LN++W+ + G P WRL S Sbjct: 61 TCGDLFYIRAEDRHSYQSVNDLVLHNIIYCPERLQLNVNWRDLLENPRGVNGDPRWRLSS 120 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 GM QARQVI QLEHES + ++ +AE LF QL + L RHRY LD Sbjct: 121 QGMVQARQVIDQLEHESPKQDALSHCLAESLFLQLAITLRRHRYQPSGGTGPGEGETLDL 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L+ L SL PF L FC +ER LRQ FRQQTGMTI+QYLRQ+R+C AQYLL+HS Sbjct: 181 LMAALGNSLDVPFDLQHFCSHYQIAERPLRQLFRQQTGMTISQYLRQLRICQAQYLLRHS 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LLIS+I+ CGFEDSNYFSVVFTRETG+TP WR Sbjct: 241 SLLISEIAARCGFEDSNYFSVVFTRETGVTPRVWR 275 >UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax=Enterobacteriaceae RepID=RHAR_YERP3 Length = 290 Score = 300 bits (768), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 148/275 (53%), Positives = 184/275 (66%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M L L D+ S+Q VAV +RYPQ+ F EHTH FCE+VIVWRGNGLHVLND PYRI Sbjct: 1 MRAPLLLESRDYLLSEQMPVAVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GD+FYI A D HSY SV+DLVL NIIYCPERL LN W +P Q +WRL + Sbjct: 61 TCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTT 120 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 GMAQAR +I QL ES + ++ ++ E+L QL ++L RHRY ++ LD Sbjct: 121 QGMAQARPIIQQLAQESRKTDSWSIQLTEVLLLQLAIVLKRHRYRAEHAHLLPDGEQLDL 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 +++ L SL + F + FC + ER L+Q FRQQTGM+I+ YLRQ+R+CHA+ LL+ S Sbjct: 181 IMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGS 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ISDI+ CGFEDSNYFS VFTRE GMTP +R Sbjct: 241 EHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYR 275 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 129/272 (47%), Positives = 176/272 (64%), Gaps = 1/272 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 LKL +D+F +++ AV VA+R PQ F H HDF ELVIVWRGNGLH+ ND PYRIT GD Sbjct: 6 LKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYRITCGD 65 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 LFY+ ADD+HSY SV+ L L NI+Y RL L DWQ +P + Q +WRLG GMA Sbjct: 66 LFYVTADDRHSYESVHALELDNILYIRPRLTLPTDWQNLLPDGGVAQQQRYWRLGEQGMA 125 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 R + L E + P + +++E+L Q+ +L R+R+ + LD L+ Sbjct: 126 IIRDRVESLTQECMKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ-LDLLMNA 184 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L S+ PF L+ FC + S R LR +F+QQTGM+++QYLRQ+R+C A LL++ R I Sbjct: 185 LRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELLRYDRQTI 244 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 S+++ +CGF+DSNYFSVVF + G+TPS +R Sbjct: 245 SEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQ 276 >UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=Pectobacterium RepID=RHAR_PECCP Length = 284 Score = 253 bits (646), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 130/271 (47%), Positives = 178/271 (65%), Gaps = 1/271 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 LKL +D+F +D+ V VA+R+PQ VF H HDF ELVIVWRGNGLH+ ND PYRITRGD Sbjct: 8 LKLQTEDYFLTDKNVVMVAERHPQPVFPLHHHDFDELVIVWRGNGLHLWNDVPYRITRGD 67 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 +FY+ A+D+HSY SV+ L L NI+Y RL L+ DWQ +PG Q HW LGS GM Sbjct: 68 MFYVSANDRHSYESVHGLELDNILYIRNRLTLSADWQRLLPGGEHPQSQRHWCLGSEGMD 127 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 R+ + L E + + +++E L Q+ +L R+R+T D+ P + LD L+ Sbjct: 128 TLREKVDALRQECMKSDALSLQLSEALLLQIALLAARYRHTPDN-PQLADAHQLDMLMNA 186 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L AS+ +PF + FC++ S R LR +F++QTGM++ YLRQ+R+C A LL++ I Sbjct: 187 LRASIAAPFRFEAFCEQHHFSARSLRSRFKEQTGMSVPHYLRQLRLCKAMELLRYDLQTI 246 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 DI+ CGFEDSNYFSVVF + G++PS +R Sbjct: 247 GDIAALCGFEDSNYFSVVFHQAFGVSPSAYR 277 >UniRef50_UPI000197C3B0 transcriptional regulator, AraC family protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3B0 Length = 285 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 105/278 (37%), Positives = 157/278 (56%), Gaps = 1/278 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 L + D+F + V + R Q+ F H+H+F E VIV+ GNGLH N Y IT GD Sbjct: 6 LSINSSDYFIRPENTVTIEMRDSQEDFIVHSHNFNEFVIVFSGNGLHHWNGIDYPITCGD 65 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 LFYI+A+D H Y SVN+L L N++Y P + + +P HW+L ++ Sbjct: 66 LFYINAEDCHGYHSVNNLKLVNVLYKPNEFFIKKSIEKYVPLSYQPITSRHWKLPPSSLS 125 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 +I ++ E + + + E LF QL + + R RY D P S +D+LI Sbjct: 126 TLTPIIEKMALECQKPDIPSIHLCEGLFLQLAIYIYRLRYQPDQ-APISLLHQMDQLINC 184 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L S+ + F+L+KF E S R L++ F+ +TGMT+ +YL+Q+R+C A LL+ + L I Sbjct: 185 LNLSINTSFSLEKFAQEHQMSARSLQRLFKSKTGMTVMEYLQQLRLCQAALLLRSTSLSI 244 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 S+++ +CG+EDSNYFS VF ++ MT S +R QKD Sbjct: 245 SEVAGQCGYEDSNYFSSVFHKKMKMTASAYRCCFLQKD 282 >UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAR_MANSM Length = 276 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/275 (34%), Positives = 153/275 (55%), Gaps = 5/275 (1%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M L+L +F S++ + V R+ Q F H HDF E+VI+ GNG+H ND + I Sbjct: 1 MTDILQLSHHSYFISEESPITVERRHYQPPFPLHRHDFNEIVIISAGNGIHFWNDEIHPI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T G++ YI + DKH Y V+ L L NI+Y PE+L L + IP N R+ Sbjct: 61 TTGNVLYIESGDKHKYGEVDKLKLDNILYRPEKLSLFPIMKDYIPHNNEKKS---LRINQ 117 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + Q + +I QLE ES + + ++E +F Q+++L+ R + + S + L+ Sbjct: 118 ETLVQLQSLISQLEIESKKTNKSSMHLSEAIFLQILILICRTQQQENK--AYSDISKLES 175 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L + L S+ F L FC + + +R+ F+QQT MTI QYL+++R+C A LL+++ Sbjct: 176 LFSALNQSISQEFYLADFCRQHQLAVSSVRRIFKQQTNMTIAQYLQKLRLCRAATLLRNT 235 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +++I+ CG+ DSNYFS VF + TP+++R Sbjct: 236 SESVANIAIRCGYSDSNYFSSVFGKTFSCTPTEYR 270 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 148/266 (55%), Gaps = 4/266 (1%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 +DFF + V R PQ+ F EH+HDF EL+IV +G G H+LND P + + + YI Sbjct: 7 NDFFNNSDATVCTEVRAPQEDFPEHSHDFHELMIVTKGAGQHILNDVPINLAQNYICYIS 66 Query: 70 ADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 D+H + ++L L NI++ +L + + +P S Q W + + M + + Sbjct: 67 PKDRHLFEQSDNLHLTNILFQKNKLAYSPLLKSVLPK--ESDAQQSWYISTETMKKVCTL 124 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASL 189 + Q+EHESS H + M E LF QLV+ ++R R TS S +S+ + K+I + + Sbjct: 125 MAQIEHESSLHSVESRLMTEALFQQLVVEISRGRLTSQS--NNASDNSILKIIDWIQNNY 182 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 F + D+ S R L ++ +Q T ++ N Y+ +VR+ HA LL +S L ++DI+ Sbjct: 183 AEEFNVGDISDQFEISSRTLSRRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVTDIAF 242 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWR 275 + G++DSNYFS F R T TP+++R Sbjct: 243 QVGYKDSNYFSTKFKRFTNKTPTEFR 268 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 95/266 (35%), Positives = 145/266 (54%), Gaps = 4/266 (1%) Query: 11 DFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 DFF S +VA+ R PQ F EH HDF E+VIV G G+HV N +PY IT G + ++ Sbjct: 8 DFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVCFVRD 67 Query: 71 DDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 D+H Y ++L L N++Y P+R + +P HWR+ + Q RQ+ Sbjct: 68 HDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSVLQQVRQL 127 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASL 189 + Q+E + ++ + E+LF QL++LL R +S +S + L+ L+ L Sbjct: 128 VAQMEQQEGENDLPSTASREILFMQLLLLL---RKSSLQENLENSASRLNLLLAWLEDHF 184 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 D D+ S S R L +Q +QQTG+T +YL ++R+ A++LL+HS ++DI+ Sbjct: 185 ADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAY 244 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWR 275 CGF DSN+FS +F RE +P R Sbjct: 245 RCGFSDSNHFSTLFRREFNWSPRDIR 270 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/266 (33%), Positives = 137/266 (51%), Gaps = 4/266 (1%) Query: 11 DFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 DFF S +V + R PQ F EH HDF E+VIV G G HV N +PY ++ G + ++ Sbjct: 19 DFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHVFNGQPYTLSGGSVCFVRD 78 Query: 71 DDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 D+H Y +L L N++Y P+ + +P HWR+ + QA + Sbjct: 79 HDRHLYEHTENLCLTNVLYRSPQAFSFLSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPL 138 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASL 189 + +LE A E+LF QL++LL R S ++ L++LI L Sbjct: 139 VERLEALRECSDVHAVASMEMLFMQLLILL---RSGSQMQGGGHADERLNQLIAWLEDHY 195 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 ++ D+ S R L +Q +Q+TG+T +YL ++R+ A+YLL+HS ++DI+ Sbjct: 196 AEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMKARYLLRHSEESVTDIAY 255 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWR 275 +CGF DSN+FS +F RE +P R Sbjct: 256 QCGFGDSNHFSTLFRREFSWSPRDIR 281 >UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV7_TOLAT Length = 275 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/271 (31%), Positives = 145/271 (53%), Gaps = 5/271 (1%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 KL +FF + + + V R PQ+ F EH HDF ELV+V G G+HV + R ++RG + Sbjct: 3 KLNHAEFF-DNNKVINVLPRLPQEPFPEHCHDFHELVLVKSGCGIHVCDGRAIHVSRGSV 61 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIP-GFNASAGQPHWRLGSMGMA 124 Y+ +D H + +++L L N+++ P+ + + + +GQ + Sbjct: 62 IYLKDEDVHCFDHMDNLCLTNVLFMPDEFHSSPHLTSLLTESCRSDSGQ--MMVCPQIQQ 119 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 QA ++ Q+ E+ + +++ M E LF QL +LL R R + + L++ LI Sbjct: 120 QAELLLTQIHDENDRQDAYSSLMVETLFSQLAVLLWRDRQLNKKYRSEEQDNLIN-LINY 178 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + ++ + D + R L ++ ++ TG+T N YL +VR+CHA YLL HS+ + Sbjct: 179 INENYQNELNWSELSDSFNIPLRTLNRKLQEHTGLTPNNYLGRVRLCHASYLLSHSQDAV 238 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +DI+ CGF DSNYFS F + +TP Q+R Sbjct: 239 TDIAFSCGFNDSNYFSSKFHQAFNVTPMQYR 269 >UniRef50_UPI000197C3AF transcriptional activator RhaS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3AF Length = 269 Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 88/275 (32%), Positives = 137/275 (49%), Gaps = 12/275 (4%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +KL +DFF + QQ + V R PQ +F EHTHDF E+ +V +G GLHVLN RPY + G Sbjct: 1 MKLYSEDFFITPQQHITVEPRVPQPIFPEHTHDFSEIFLVTQGIGLHVLNGRPYTLCPGM 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGF---NASAGQPHWRLGSM 121 + YI + D H + +V++L L N++Y R + + I F +A HW L Sbjct: 61 VCYIKSCDYHLFDNVSNLNLTNVLY---RSDSSFTYLNNISHFFPTDAERNISHWLLNKE 117 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 +A+Q+I +L + + E LF QL++ L RY + + ++E + ++ Sbjct: 118 HYNKAQQIIDKLNESDGSDLAY----TESLFLQLIVNLQDGRY--NHIGEGNNEQRIIQM 171 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + L + + S S R + + G++ YL ++R+ A Y ++ S Sbjct: 172 LRWLNMNFIEDVDWGHLTTQFSVSLRTFHRYMKNNLGISPQNYLIKLRLSEAYYQIRFSD 231 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I+DI+ E GF DS YFS F E TP RH Sbjct: 232 KTITDIALESGFNDSAYFSTCFKSEYNFTPRDLRH 266 >UniRef50_Q2NRC4 Putative L-rhamnose operon transcriptional activator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NRC4_SODGM Length = 180 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/149 (46%), Positives = 92/149 (61%), Gaps = 1/149 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 LKL D+F +D+ AV VADR PQ F H H+F ++V VWRGNGLH LND PY IT GD Sbjct: 4 LKLHVSDYFLTDKNAVTVADRRPQPAFPHHCHEFDKIVFVWRGNGLHTLNDVPYLITCGD 63 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH-WRLGSMGM 123 +FYI+A D+H Y SVNDL L N++Y + L LN++WQ +PG + W L + GM Sbjct: 64 VFYINARDRHGYESVNDLALDNVLYRRDLLTLNVNWQTLLPGRGTGPDERQDWCLSTPGM 123 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLF 152 A RQ + L E + + ++E LF Sbjct: 124 AILRQSVDALSKECMKSDALSLLLSETLF 152 >UniRef50_C6DJR4 HTH-type transcriptional activator rhaS n=40 Tax=Enterobacteriaceae RepID=RHAS_PECCP Length = 279 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 132/271 (48%), Gaps = 3/271 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L DDFF S VAV R PQ F EH HDF E+V+V +G G+HV ND+PY + G +F Sbjct: 4 LRGDDFFTSRAVTVAVEPRTPQTAFPEHYHDFWEIVLVEQGAGVHVFNDQPYALCSGSVF 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ +D+H + V L L N++Y P + D +P Q W++ + GM Q Sbjct: 64 FVRDNDRHLFEDVEGLCLTNMLYRSPRGFRFLSDIAAFLPYGPNGEWQGQWQVNAAGMQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 +Q + L + P A +E LF +++ L + + + S S + L+ L Sbjct: 124 LKQSLNSLAELAQSDAPEAIAASESLFLHILVQLRQQCFQTQS--SGSERQGVQALLGWL 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + D S R L +Q +Q TGMT +YL ++R+ A+ LQ S I+ Sbjct: 182 QNNYSEEVNWGSLADRFSLPLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I+ CGF DSN+FS F + P RH Sbjct: 242 TIAHACGFSDSNHFSTQFRKAFSQAPKSLRH 272 >UniRef50_C6C3E6 Transcriptional regulator, AraC family n=8 Tax=Enterobacteriaceae RepID=C6C3E6_DICDC Length = 281 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 3/271 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L D+FF S VAV R PQ F EH HDF E+V+V +G G+HV ND+PY + G +F Sbjct: 4 LHGDEFFVSQATTVAVEPRMPQSAFPEHYHDFWEIVVVDQGAGVHVFNDQPYVLCSGAVF 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ +D+H + V +L L N++Y P + D +P W++ + Q Sbjct: 64 FVRDNDRHLFEQVEELHLTNVLYRSPRGFRFLSDIAPFLPYGPNGEWLGQWQVNNGTRQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 +Q+I QL ++ P +E LF Q+++LL + + + S S+ + L+ L Sbjct: 124 VKQLILQLAGQARSERPEDIATSESLFLQILVLLRQKGFRTQS--DGSAAQGIQALLGWL 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + D + S S R + +Q +Q TGMT +YL ++R+ A+ LQ S I+ Sbjct: 182 QNNFCEEVNWDALAERFSLSLRTMHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I+ +CGF DSN+FS F + + P RH Sbjct: 242 TIAHDCGFSDSNHFSTQFRKAFSLAPKSLRH 272 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 21/287 (7%) Query: 9 KDDFFASD--------QQAVAVADRYPQDVFAE-HTHDFCELVIVWRGNGLHVLNDRPYR 59 K +F+ SD + A + A ++ D+ E H HDF ELVI+ GNG+ V++ Y Sbjct: 8 KSEFYFSDPDCPVAVKRVAASNAAQHLHDLTTEPHRHDFAELVIITAGNGVQVVDGGEYA 67 Query: 60 ITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFN----------- 108 ++ GD+F I + H + N + + N++Y P RL L W +PG+N Sbjct: 68 VSLGDVFLIQGNGAHYFLERNRVSMINVLYDPARLPLPFGWLRRLPGYNVIFELEPSVRS 127 Query: 109 ASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDS 168 A + H +L + +A+A +++G+LE E Q P A A +L++ ++R Y + Sbjct: 128 AETFKHHLKLSAAELAEAVEIVGKLERELEQDTPGAELAAFQRLLELIVFISRC-YDAPP 186 Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 ++ + ++I+ L + + L++ A+ S L + FR TG + YL +V Sbjct: 187 AENLAAVMRVGRIISLLESEFMREWRLEELAKLAATSPNNLLRLFRTVTGTSPVDYLIRV 246 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 R+ A L+++ +++I+ +CGF DSNYF+ F G++P ++R Sbjct: 247 RLRRAAEALKNTPGAVAEIAADCGFADSNYFARKFRAAYGVSPREFR 293 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 12/280 (4%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L K+D+F D + V R PQ+ F H H+F E+VI+ G G+H+ + Y + GD F Sbjct: 8 LKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTF 67 Query: 67 YIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNA-SAGQPHWR-------- 117 I D H Y +++ L L NI++ P L L++ ++ G++A +P WR Sbjct: 68 VIGGDRPHDYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSR 127 Query: 118 --LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 L + + + + L+ E Q MA L QLV L+R Y P + Sbjct: 128 LQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRC-YIRTRNPESKKL 186 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + + I+ + P +LD + + S R + F + +YL QVR+ A Sbjct: 187 LRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASR 246 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LL+ + I+DI+ + GF DSNYFS F G++P ++R Sbjct: 247 LLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYR 286 >UniRef50_Q65Q31 HTH-type transcriptional activator rhaS n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAS_MANSM Length = 268 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 6/270 (2%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 KLL DFF + +Q + + R PQ++F EHTHDF ELVIV G+G H+LN P+ + G + Sbjct: 4 KLLARDFFNNKEQPIILEPRAPQEIFPEHTHDFDELVIVKHGSGRHILNGYPHDLYPGVV 63 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 YI A D HSY ++ DL L NI+ N + I + +P + + Sbjct: 64 LYIQAQDHHSYENLQDLCLTNILIQSNN---NFKYLNNIDIL-LNGLKPENSSYQLINKK 119 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 + I L + + N E LF Q++ + H++ T + ++I L Sbjct: 120 TAEYIDSLLEKINAIDESYNLQNECLFFQVLSSIQAHQFNDSGYGNTEEKG--RQMIRWL 177 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + + ++ ++ + R L + + QTG T Y+ ++R+ A Y L+++ I Sbjct: 178 ENNFEKEIDWEELAEKFALPIRTLHRYIKSQTGHTPQNYVTKLRLAQAYYQLKYTEKNII 237 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +I+ +CGF DS+YFS F E + P + R Sbjct: 238 NIAYDCGFNDSSYFSTCFKNEYSIAPRELR 267 >UniRef50_C4LCV2 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV2_TOLAT Length = 277 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 75/274 (27%), Positives = 145/274 (52%), Gaps = 7/274 (2%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++L +F + +A+ P+D EH H+F ELVIV G+GLHV+N +P I GD Sbjct: 1 MRLETQTYFHAITDKLAIYSSDPEDNNKEHCHEFDELVIVKSGHGLHVINGQPLFIKTGD 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPER-LKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 +FY+ ++ H Y + L L NI+ P+ + + + + + + L S G+ Sbjct: 61 VFYVKNNEYHFYDELGTLKLINILINPDADFFFIKNIEPLLRKLTSDSLDEYAWLDSAGL 120 Query: 124 AQARQVIGQL-EHESSQHVPFANEMA-ELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 ++A ++ L +H+S H N++ E LF QL+ L+ +++T ++E ++K+ Sbjct: 121 SKATEIARHLFDHKSKNHDAGGNKLEQEALFLQLITLILEYKHTDSD----NTEHKINKI 176 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + S ++ R L + +++TGMT + YL+++R+ A+ ++ + Sbjct: 177 LKYVQTDCFSDINWHDLSEQFGVPLRTLFRHLKEKTGMTPDNYLKRLRLISARKKIRETD 236 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + I++I+ +CGF +SN+F+ + G+TPS R Sbjct: 237 ISITNIAFDCGFSNSNHFATAYKSVFGITPSTER 270 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 26/288 (9%) Query: 11 DFFASDQQAVAV---------ADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRI 60 D+F +D V V + +P DV EH HDFCEL +V G G+HVL + + Sbjct: 9 DYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGESFHV 68 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAI----------PGFNAS 110 + GD+F + H + L L N++Y PERL L L + P F ++ Sbjct: 69 STGDVFVLQGRQVHCFRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEPTFRST 128 Query: 111 AG-QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 RL + A ++ ++E+ES + L +L++LL+RH SD+ Sbjct: 129 HRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYAQSDT- 187 Query: 170 PPTSSETLL--DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 S LL +L++ L P+ L++ ++A S L + FRQ TG + +L Sbjct: 188 --RESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFLIG 245 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +R+ A+ LL+ S L +++I+ ECGF D N+F F + G+TPS +R Sbjct: 246 LRIEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYR 293 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 126/259 (48%), Gaps = 13/259 (5%) Query: 29 DVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 D EH H DF ELVIV G H++N + I +GD+F + D H Y ++ + NI Sbjct: 26 DAMPEHFHHDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSHGYKDPHNFKIINI 85 Query: 88 IYCPERLKLNLDWQGAIPGFNA-SAGQPHWR----------LGSMGMAQARQVIGQLEHE 136 +Y PERL + PG+ A +P +R L + ++ ++ E Sbjct: 86 MYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISSLEYVAELGARINEE 145 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALD 196 + M F ++V+ L+R +Y ++ + L K I L + +P L+ Sbjct: 146 YKRKDQGYQTMIYARFMEMVVYLSR-QYIIENKLLHDTFVHLAKAILFLEDNYLNPIKLE 204 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 K DEA S R + F++ G T + +RV HA LL++S L I+DI+ E GF DS Sbjct: 205 KLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNLCIADIALESGFSDS 264 Query: 257 NYFSVVFTRETGMTPSQWR 275 NYFS F + TG+TP ++R Sbjct: 265 NYFSRQFKKITGITPKEYR 283 >UniRef50_Q1ZN25 L-rhamnose operon regulatory protein n=2 Tax=Vibrionaceae RepID=Q1ZN25_PHOAS Length = 264 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 12/255 (4%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 R PQ+ F EH H F E++IV G G HV+ND P +++ + +I +D+H Y V+ L L Sbjct: 12 RAPQEPFPEHAHSFEEIIIVSDGCGTHVMNDVPMSLSKNYVCFIKKEDRHLYDRVDALYL 71 Query: 85 QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 NI++ ++L+L+ D + +P N + + W + R++I +L+ ES + Sbjct: 72 SNILFEKDKLQLSSDLKRFMP--NEADKEMGWFINESTAQSVRKLIERLDIESHIDSEES 129 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFA----LDKFCD 200 +++ +F Q+++ L R + L DK+I L + ++ FA +++ D Sbjct: 130 RMISQFIFQQIIVELWRGKIKDVDLINHG-----DKVIYAL-SHIRQHFADVNEINEVAD 183 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S R L ++ TGM NQYL R A + ++ I+DI+ G++DSNYFS Sbjct: 184 AVKLSSRQLTNSIKKLTGMNFNQYLHYTRTSKAFSDILYTDQSITDIAFRVGYQDSNYFS 243 Query: 261 VVFTRETGMTPSQWR 275 F + TP + R Sbjct: 244 TKFKQVFKQTPRETR 258 >UniRef50_A6AXJ0 HTH-type transcriptional activator RhaS n=2 Tax=Vibrionaceae RepID=A6AXJ0_VIBPA Length = 278 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 4/269 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L ++FF S + +A R PQ+ + EH+H F EL++V G+G HV+ND P +++ + Sbjct: 4 LKPNEFFVSSEIPIATELRSPQEPYPEHSHAFEELMLVSGGSGTHVINDIPMNLSKNYVC 63 Query: 67 YIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 +I +D+H + +V L L N+++ ++ ++ IP + W + A Sbjct: 64 FIKREDRHLFENVEGLHLSNVLFDQSKMAVDSSIAKYIP--DTDQQSRGWFINDQSSETA 121 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLA 186 ++I +L+ E + + + LF L++ L+R R SL S E + ++ L Sbjct: 122 NRLITRLDSEIGTDTFESKIVCQSLFNLLLVELSRGRIY--SLEGESDEDKVLSVMGYLH 179 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 + F L ++A S + L + + TGM+ YL +R+ A L++S I+D Sbjct: 180 QNYAEQFNLQDLAEQAGISTKQLSKILSRLTGMSYPNYLNHIRMSKALEALKYSDRSITD 239 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I+ + G++DSNYFS F + TP + R Sbjct: 240 IAFDVGYQDSNYFSSKFKKVFNATPREVR 268 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 16/255 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTHDFCEL ++ RG+ +H L + IT GD+F + H Y + L + NI++ PE+ Sbjct: 55 HTHDFCELALITRGSAMHWLEGAEFPITAGDVFVLQGQQSHYYYDLQKLEMINIMFDPEQ 114 Query: 94 LKLNLDWQGAIPGFNA-----------SAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 L L IPG+ A H L +A + ++ +L++E + Sbjct: 115 LNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVRGKME 174 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLL--DKLITRLAASLKSPFALDKFCD 200 F +LV+ L+R ++S T++E LL K+I + P+ ++ F Sbjct: 175 GYEAAMFAKFVELVVYLSRLYQETES---TNAEALLRVAKVIGSIEDEFTKPWKVEDFAA 231 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 A S + FR TG T YL Q+R+ + LL ++L IS+I+ E GF DSNY++ Sbjct: 232 MAHMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFNDSNYYT 291 Query: 261 VVFTRETGMTPSQWR 275 F G++P +R Sbjct: 292 RQFKASQGISPLAYR 306 >UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6X4_9BACT Length = 295 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 14/259 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H+H+F ELV+V G+GLHVL +R Y I GD+F I H Y ++ L + N +Y P+R Sbjct: 39 HSHEFHELVLVLGGSGLHVLQERSYPIYPGDVFLIKPRQVHGYRNLKKLNIANFLYLPDR 98 Query: 94 LKLNLDWQGAIPGFNAS-------AGQPHWR----LGSMGMAQARQVIGQLEHESSQHVP 142 L LD ++ G+ AG+ ++ L + QAR++ ++ E + P Sbjct: 99 LAAELDQLKSLLGYYVFFESDPLLAGRARYKNRLTLEAERFNQARELTLRMRREQQRQTP 158 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDE 201 M+ LLF QL++L+ R S++ S ET+ + +++ + P AL + Sbjct: 159 GWELMSRLLFLQLMLLICRTFSKSETT--GSEETMKIGRILRYFEENYARPVALAEVARH 216 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 CS L + FR+ + YL ++R+ A LL+ SRL +++I+ + GF DSNY + Sbjct: 217 CGCSVPTLTRFFREAMDDSPIDYLNRLRLDKAAELLRSSRLPVTEIARKTGFCDSNYLTK 276 Query: 262 VFTRETGMTPSQWRHLNSQ 280 FTR ++P +R +NS+ Sbjct: 277 CFTRRFALSPRAYRQMNSE 295 >UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Klebsiella RepID=A6T9P9_KLEP7 Length = 274 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 13/273 (4%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + L + +F Q + + P+D EH H+F ELVIV G+GLHV+N RP I +GD Sbjct: 2 MTLTVEYYFTHPQDKLGMYASDPEDNSQEHGHEFAELVIVEEGHGLHVINGRPLYIQQGD 61 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNL-DWQGAIPGFNASAGQPHWRLGSMGM 123 +FY+ D H Y + L L N++ P L +G + +A + L Sbjct: 62 VFYVQPGDVHYYDELGTLKLINVLINPAVAFGYLQQMEGLLQQLSAQRAACYGWLAPETR 121 Query: 124 AQARQVIGQL---EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LD 179 + R+++ ++ ++ + P + E LF QLV + T++S SS L Sbjct: 122 SYCRELVEKIFSPALRAADNTP----LRESLFFQLVTTI----LTAESEAEYSSTRYKLH 173 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 KL+T L + ++ + R + ++ TG+T + YL+++R+ A+ L+ Sbjct: 174 KLLTWLQEHCFEEHNWQQLAEQFHLTTRTAFRHIKEATGLTPDNYLKRLRLVSARVKLRE 233 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 + + I++++ CGF +SN+F+ ++ + G+TPS Sbjct: 234 TEMTITEVAYLCGFANSNHFTTLYKKVFGLTPS 266 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 14/247 (5%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 +H+HDFCE++ V G G +L + +R+ GDL ++ H S P Sbjct: 37 QHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAK--------APL 88 Query: 93 RLKLNLDWQGAIPGFNASA-GQPHWRLGSMGMAQARQVI--GQLEHESSQHVPFANEMAE 149 RL A+PG A Q +R+ S G + + I +L E+S + F E+++ Sbjct: 89 RLIFLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQ 148 Query: 150 LLFGQLVMLLNRH-RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 L L++L+ R R + S E K+ L + SP LD + S+ Sbjct: 149 GLVSALLVLVMRLIRINPEDEAALSQEC--QKIKEYLDQNFTSPITLDSLSETVYISKHY 206 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L F++QTG++ +YL R+ A LL + L +S++S G+E+ YFS VF R G Sbjct: 207 LSHLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYG 266 Query: 269 MTPSQWR 275 ++P ++R Sbjct: 267 ISPVKYR 273 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 25/284 (8%) Query: 11 DFFASDQQAVAVADR--YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 ++F SD+Q + + +D++ DF ELVIV GN H++N I +GD+F I Sbjct: 7 NWFTSDEQFLFYIGYGGHDEDMYLHDHVDFSELVIVLNGNATHIVNTEVSFIKKGDVFVI 66 Query: 69 HADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAG-------QPHWRLGSM 121 H+Y +D + NI+Y P+ L A P S G +P +R Sbjct: 67 DGATSHAYKDPHDFRICNIMYRPDILT------SAGPDLRTSIGYQALFVLEPFYRNIQP 120 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELL----------FGQLVMLLNRHRYTSDSLPP 171 ++ I LE+ SS E L F +LV+ L+R D Sbjct: 121 FNSKLSLPIPSLEYVSSLAAFMIEEYTNKLQGYQTMLRSRFMELVVYLSRQYQNQDQQGI 180 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + L I+ + P ++ D++ S R L + F+ T YL ++R+ Sbjct: 181 QGNLMHLANAISFMEDHYLEPLTREQIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLE 240 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 HA +LL+ + + I+++S + GF DSNYF+ FT+ G+ P +R Sbjct: 241 HACHLLKTTPVPITEVSYKSGFNDSNYFTRQFTKVYGLAPKVYR 284 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 1/245 (0%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H HD ELV + RG GL +ND Y + RGD++ ++ D H Y + NI++ E Sbjct: 30 HRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTHCYEMASSCTFYNILFRREL 89 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L+ + + + + ++L + ++ E + +P LF Sbjct: 90 LQHEPALTPLLDDWESRTDRKLYQLENDETDAEEFRFQEIIVELKKRLPGYEAAVRALFA 149 Query: 154 QLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQF 213 ++ L R +PP + K+ + A L S +L + A S F Sbjct: 150 VFLVRLLRRGNCERHIPPGHRPSA-SKVFEYINAHLGSTISLRELAGVAGMSTPAFAGAF 208 Query: 214 RQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQ 273 RQ TG ++ ++ +R+ A+ LL+ +L I +I+ GF D+ +FS VF ++TG++P + Sbjct: 209 RQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFYDTCHFSRVFRKKTGLSPRE 268 Query: 274 WRHLN 278 +R L Sbjct: 269 YRQLG 273 >UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3C3_9BACL Length = 295 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 21/260 (8%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY-----ASVNDLVLQNII 88 H+H F E+V+V G G H +N+ R+T+ D+F + A +H + S L++ N + Sbjct: 27 HSHRFVEIVLVDEGEGFHFINEDIVRVTKNDVFLLPAGTRHVFRPGHAGSRRPLIVYNCL 86 Query: 89 YCPERLKLNLDWQGAIPGFN------------ASAGQPHWRLGSMGMAQARQVIGQLEHE 136 Y P +L L+ +PGF+ A+ P W G + E Sbjct: 87 YEPGKLLSCLE---HLPGFHELIRSRPYLFEGAAPPSPGWLHLRDGGSPWNIWFRGAYRE 143 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET-LLDKLITRLAASLKSPFAL 195 ++ P F +L ++L RH S E ++++++ R+ S + Sbjct: 144 FTERKPGYLLQLYGRFIELAVMLERHLERLGSSSAAEPENRMMEEVLRRIDTDYASRLSA 203 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 F SER + FRQ G T + Y+R R+ ++ LL +RL + +I G+ D Sbjct: 204 RSFAAATHLSERHFHRLFRQYAGCTFHDYVRNKRMERSRELLASTRLPVMEIMRSVGYAD 263 Query: 256 SNYFSVVFTRETGMTPSQWR 275 +F +F + TG++P+++R Sbjct: 264 KKHFLSLFKQSTGVSPTEYR 283 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 16/282 (5%) Query: 8 LKDDFFASDQQ-AVAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITRGDL 65 +K +F +D+ + Y + + HTH DF ELVIV G H++++ + I +GD+ Sbjct: 4 MKLSYFTNDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKKGDV 63 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKL-NLDWQGAIPGFNA-SAGQPHWR------ 117 F I+++ H Y + D + NI+Y E L L + D + GF+A +P++ Sbjct: 64 FVINSNTCHGYENAKDFRICNIMYRSENLLLADYDIKKN-AGFHALFVIEPYFTKEHSFK 122 Query: 118 ----LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS 173 L + + ++ L E + LF LV+ L R Y + Sbjct: 123 SNLTLKPLDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLAR-LYDFGNSSEKV 181 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + K I+ + ++D + S R + F + T Y+ +R+ A Sbjct: 182 DVINIAKSISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIRRA 241 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LL+ + L IS I+ +CGF DSNYFS +F + +TP Q+R Sbjct: 242 CSLLKETTLPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_C0AEA5 L-rhamnose operon transcriptional activator (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEA5_9BACT Length = 249 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 16/248 (6%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 +L +F + V+V Q H H+F EL IV G G H+ Y IT GD+ Sbjct: 3 RLRVSSYFKIPELPVSVLAMSEQRSMEIHRHEFAELAIVTAGAGEHLTEQGSYPITAGDV 62 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNA-------------SAG 112 F+I + H YA L L N+++ P RL A+PG+ A +AG Sbjct: 63 FFIPPELPHGYAHAQGLRLVNVLFLPGRLPEPGAELRAMPGWRALFELEPKYRDVHGAAG 122 Query: 113 QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT 172 H RL +A+ + LE+E + P +F QL+++L R Y ++ Sbjct: 123 --HLRLPPDELARVTALTRALENECRAYTPGGTTWVTAVFQQLLVMLARS-YVPNAAEAG 179 Query: 173 SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 ++K+I + + AL+ A S ++ FR TG + Y+ Q R+ Sbjct: 180 RRLLAVEKVIEHIDENYAEELALESLAQMAGMSLSTFKRAFRTVTGTSPIDYVMQTRLTR 239 Query: 233 AQYLLQHS 240 A +LL+ S Sbjct: 240 ACHLLRTS 247 >UniRef50_Q7MG26 AraC-type DNA-binding domain-containing protein n=4 Tax=Vibrio RepID=Q7MG26_VIBVY Length = 289 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 36/278 (12%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 A D + F H HDF EL +V G G H++ Y +T GD+F I+ D +H++ V+ Sbjct: 19 AYVDGHHHSDFGLHKHDFSELFLVVSGKGNHLVASHVYPLTAGDVFVINGDIEHAFQDVD 78 Query: 81 DLVLQNIIY--------CPERLKLNLDWQG--AIPGFNASAGQPHWRLGSMGMAQA--RQ 128 L + N+++ P KL+ +Q + G+ +L Q Q Sbjct: 79 RLEIINLMFEAGTPFFETPSLRKLS-GYQAMFKVEPIARQTGEYRAKLTLNDEQQPLITQ 137 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNR-HRYTSDSLPPTSSETLLDKLITRLAA 187 +I + HE Q M L QLV+ L R ++ + LP T+ LA Sbjct: 138 LIEAIRHEYQQGESGFETMLTSLMQQLVITLARMYQQQTHDLPNTT-----------LAL 186 Query: 188 SLKSPFALDKFCD----------EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 S F F D A S+R L + F+Q + N YLR++++ + + LL Sbjct: 187 SRALIFIEQHFADGEIHSGDVAQAAFVSQRQLERLFKQFLNTSPNLYLREMQLNYGRDLL 246 Query: 238 QH-SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 + + + I ++ +CGF DSNYFS F ++ G++P Q+ Sbjct: 247 NNEAGMSIQHVAEQCGFSDSNYFSKCFKQKFGLSPRQY 284 >UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=C9XN35_CLODC Length = 312 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 29/289 (10%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDV-FAEHTHDFCELVIVWRGNGLHVLNDRPYR 59 M +++ L D+F + + D+ +D+ F H HDF +++I GN + ++ PY+ Sbjct: 24 MDNKIGYLNDNF-----KIFNIRDK--KDIQFEYHNHDFNKIIIFINGNVTYFVDGIPYK 76 Query: 60 ITRGDLFYIHADDKHSYASVNDLVLQNIIY-------CPERLKLNLDWQGAIPGFNASAG 112 + D+ +I ++ H ++ N+ Y PE +K N D + A Sbjct: 77 LKPWDILFISNNEIHK-----PVIDSNVFYERIAIWISPEFMKKNSDATSDLEKCFKIAT 131 Query: 113 QPH---WRLGSMGMAQARQVIGQLEHESSQHVPFANE-MAELLFGQLVMLLNRHRYTSDS 168 + RL + + I Q+ + S + F NE + LF QL++ LNR +++ Sbjct: 132 ENKCNRLRLNIHDIESIKSFIEQI-NISESNTEFGNEILRNALFIQLMIFLNRIFLKNEN 190 Query: 169 LPPTSS---ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYL 225 + T + + K++ + +++ ++D E S+ L ++F+ TG +I+ Y+ Sbjct: 191 MESTEDVFYDETIKKVLNYINSNIDDKLSIDSISSEFFISKYYLMRKFKSHTGTSIHNYI 250 Query: 226 RQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 Q R+ A+ L+ + L+ S++ +CGF D + F F + G++P + Sbjct: 251 VQKRLILAKSLITNGYLM-SEVCNKCGFNDYSSFVRAFKKNYGVSPKNY 298 >UniRef50_A4SS82 Transcriptional regulator, AraC family n=2 Tax=Aeromonas RepID=A4SS82_AERS4 Length = 261 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 26/256 (10%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 R+ Q + H+HDF +LVI G + + R+ G + I ++H YA+ D L Sbjct: 28 RHYQSDISSHSHDFAQLVIPLDGPLEIEVQGQGRRLAPGFICVIAPGERHDYAA--DPAL 85 Query: 85 QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA-RQVIGQLEHESSQHVPF 143 ++ + L +L A P Q H+ M A RQV G Sbjct: 86 SFLVQESDWLPGDL---AARPFIALDEPQRHYLAFLHRMVTAGRQVAG------------ 130 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 M ++ G LL + + S PP + +L K+ + A L P ++ A Sbjct: 131 ---MEQVWLG----LLAQGQEMHSSFPPRLAARIL-KVQRHIEAHLAEPLGNEQLAAIAC 182 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 + + FRQQ GM+++ Y+R R+ A+ LL H+ L I +I++ CG+++ F+ F Sbjct: 183 LGQSQFKHTFRQQLGMSVSHYIRARRMTLARTLLSHTELPIGEIASRCGYQNQGAFAERF 242 Query: 264 TRETGMTPSQWRHLNS 279 E+G+TPS WR N Sbjct: 243 LTESGLTPSLWRQQNG 258 >UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EB0 Length = 294 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 14/258 (5%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 + +F H H++ EL +V G G + +++ ++ GDL I A H + ++ Sbjct: 43 EGLFQSHAHEYDELTLVLDGEGYYSSSEQNIKVAAGDLILIPARLHHGFVCTRPWQGISV 102 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSM-----GMAQARQVIGQLEHE--SSQH 140 + +RL ++ + F+ +PH R+ S M A QLE E S + Sbjct: 103 HFFHDRLPVHCQYL-----FHEIESKPH-RIRSSHLHEDDMRWAEISFYQLEKEWNSKRQ 156 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 A M + F +++ R+R TS T E +L+ ++ + +S + +++ Sbjct: 157 DIDAYNMMRIAFETTLLIFQRNRETSIRAAGTD-EVVLEAILKEIHSSYHTQITVNELAA 215 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 SE LR++F + G++ QY+ +R+ A+ LL+ + I IS E GF S+ F Sbjct: 216 RHFISESNLRRKFSESFGVSPKQYIINLRLMEAKRLLRQTDKAIESISAEVGFTSSSRFY 275 Query: 261 VVFTRETGMTPSQWRHLN 278 FT+ G TP +WR N Sbjct: 276 EFFTKSNGATPLEWRKQN 293 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 24/262 (9%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA--SVNDLVLQNIIYCP 91 H H+F ELV + +G+GLH + IT GD+F I H+Y + + N+++ P Sbjct: 34 HRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVVNVLFVP 93 Query: 92 ERLKLNLDWQGAIPGF-----------NASAGQPHWRLGSMGMAQARQVIGQLEHESSQH 140 L+ L + F + + Q L M R ++ QL E Sbjct: 94 ALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLMKEYGNK 153 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSD---SLPPTSSETLLDKLITRLAASLKS----PF 193 + + +L ++L+R Y ++ SLP ++ ++I R+ +K P Sbjct: 154 ESGYQFLIKSKLIELFIILSR-IYANNRNHSLPSIQND---GEMIARICEFIKRHQAHPL 209 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +L++ A S+ FRQ TGM+ ++ R+ A+ LL S I+ I+ + G+ Sbjct: 210 SLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALDTGY 269 Query: 254 EDSNYFSVVFTRETGMTPSQWR 275 ED ++F+ VF + TG TPS +R Sbjct: 270 EDLSHFNHVFKKLTGETPSLYR 291 >UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8U7_9BACT Length = 298 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 14/255 (5%) Query: 34 HTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H HD F ELV+V G+ HV + I GD++ I + H YA+ L + N+++ + Sbjct: 32 HAHDGFYELVVVRSGSATHVHDGVKSHIESGDVYLIPPGEPHYYANARQLGIYNVLFTGD 91 Query: 93 RLK-LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQ-----------VIGQLEHESSQH 140 L ++ GA P A G L A R+ ++ ++ E +Q Sbjct: 92 FFAGLLAEFPGA-PDIEAYLGLSGGALPEGHRADVRRFDPELFFRITALLDEIVEEETQE 150 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 + A M +++ L+ RH S S+ + L+ L A ++L + + Sbjct: 151 LSGARLMILSNALKILTLICRHARKSAERNIGSAGYRIASLVKTLEADFAGEWSLRRMAE 210 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S R+QFR+ G +L +R+ A +LQ I++ + CGF DSNYF+ Sbjct: 211 HTGFSVACFRRQFRRIIGEPPVAWLLSLRLEKAAMMLQTGDGSIAETAEACGFPDSNYFT 270 Query: 261 VVFTRETGMTPSQWR 275 +F R G TP +R Sbjct: 271 RMFHRRFGATPRAYR 285 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/251 (20%), Positives = 117/251 (46%), Gaps = 6/251 (2%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY-ASVNDLVLQ 85 P + F H H E+ V +GN + L + + ++ I ++ +H++ A D L Sbjct: 36 PFETFGPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLM 95 Query: 86 NIIYCPERL-KLNLDWQGAIPGFNASA--GQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + + PE + N D G + + + + + + + + ++ +E +Q Sbjct: 96 QLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSK 155 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + + + + +L++L+ +RY ++ P + L K I+ + + +S + + Sbjct: 156 YYQYLVVMYYAELLILI--YRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDVASQT 213 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 ER LR+ F Q ++ YL Q+R+ A LL+++ + + ++ CGF+ YFS + Sbjct: 214 GVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQYFSRI 273 Query: 263 FTRETGMTPSQ 273 F ++ G++P + Sbjct: 274 FKQQMGISPRE 284 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 14/261 (5%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL-FYIHADDKHSYASVNDLV 83 R +++ H H + EL + G LH ++D+ YR G++ + HSYA D Sbjct: 21 RSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMHHSYAPSEDQA 80 Query: 84 LQNII-YCPERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMAQARQVIGQLEHESSQH 140 Q I+ Y E+ +L I + G P R+ Q ++G + E S+ Sbjct: 81 FQRIVVYFTEKAIGDLTL---IEKMRHAGGLYHPDRRMSH----QIHGLLGMMLMEQSET 133 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 + E + +++LL + T L PT +++ + K+I ++ LD+ Sbjct: 134 DDLHDITMETILRAILLLLLKDVRT---LNPTVNKSRVIKVIEYISDHYMEDLRLDELAG 190 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S+ L ++F++ T TINQY+ R+ +AQ + + S ++ CGF S +FS Sbjct: 191 RFYVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFS 250 Query: 261 VVFTRETGMTPSQWRHLNSQK 281 VF TGMTP+ +R SQ+ Sbjct: 251 RVFRSVTGMTPTAFRKSCSQR 271 >UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI4_9FIRM Length = 299 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 17/256 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLVLQNIIYCP 91 HTH F E IV G+ LH++ND IT+GDL +I D HSY +D + NI + Sbjct: 34 HTHTFYEFFIVAEGSALHLVNDSIQTITQGDLVFIRPKDTHSYQFYYSDDFRIINIGFSE 93 Query: 92 ERL---KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR---QVIGQL-EHESSQHVPFA 144 + L +L LD + S P RL G + + IG L + Q F Sbjct: 94 QLLQNIRLFLDHTAMLRTLTESELPPCVRLDKSGREEISVRFEEIGALMDTPKIQKTVFY 153 Query: 145 NEMAELLFGQLVMLLNRHRYTSDS--LPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + L + R+ ++ D+ P S + ++ + K + + Sbjct: 154 AKCC------LADVFTRYFFSYDTEEFPTASCPSWFQPMLNEMQKFDNLRIGFPKMIELS 207 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 SCS L + F+ +T +Y+ R+ ++ YLL + I +IS CGF ++F + Sbjct: 208 SCSSNHLCRVFKSVMSVTPTEYINSKRLEYSVYLLTQTSKEIIEISMLCGFSSLSHFYHL 267 Query: 263 FTRETGMTPSQWRHLN 278 F ++ PS++R +N Sbjct: 268 FKKKYQCPPSRFRKMN 283 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 11/252 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY---ASVNDLVLQNII 88 ++HTHDF E+ V G+G H + D+ I RGDLF I H + + N LV+ N I Sbjct: 32 SQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCI 91 Query: 89 Y---CPERLKLNLDWQGAIPGF-NASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 + E+LK + + S+ W + ++ + E + P Sbjct: 92 FRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGP-- 149 Query: 145 NEMAELLFGQLVMLLNR-HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 L+ GQL+ +L RY D ++ +D I + + + + + + Sbjct: 150 -RYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSF 208 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S ++ F++ TG+T Q+L+ +RV LL+ + + I + + + G++D +F +F Sbjct: 209 MSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLF 268 Query: 264 TRETGMTPSQWR 275 ++TG+TP ++R Sbjct: 269 RKKTGVTPREYR 280 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY---ASVNDLVLQNIIY 89 EH H + E+V V G G H + D + ++G L+ I H + + N L++ N+ Sbjct: 42 EHDHAYLEIVYVMSGEGYHYVADEVNKTSKGSLYIIPIGTSHIFRPNGTANRLLVYNLCI 101 Query: 90 CPERLKLNLDWQGAI----PGFNASAGQPHWRLGSMGMAQ-ARQVIGQLEHESSQ-HVPF 143 P DW G + + H G+ G R +L Q H F Sbjct: 102 RP-------DWIGELGVWLSQYCRDTDVLHVLDGNPGTYLFLRDTPLELAPSFEQLHREF 154 Query: 144 ANE--------MAELLFGQLVMLLNRHRYTSDSL----PPTSSETLLDKLITRLAASLKS 191 E +A LL QL+ ++R T DS ++ + ++ + + Sbjct: 155 TEESWGFETTVLAGLL--QLLTRISRKLKTQDSTGDQTTGSTRHSEFVSIVEHINRHIAE 212 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P +++ D+A S+R + FRQQTGM ++Y++ RV A LL + ++DI+ + Sbjct: 213 PLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELACQLLTGTSQSVADIAKKV 272 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 G++D +F VF + G+TPSQ+R S K Sbjct: 273 GYQDPAHFREVFRKVMGITPSQYRPEASNK 302 >UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787DEA Length = 290 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 8/283 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M ++ D+F D + V + H HDF E+ + G G H + + R+ Sbjct: 1 MKRPMETYYGDYFFRDDTLMYVNRNAENFTGSYHNHDFLEIAYIAEGEGFHHMENSVQRV 60 Query: 61 TRGDLFYIHADDKHSYASVND----LVLQNIIYC----PERLKLNLDWQGAIPGFNASAG 112 +G +FYI H + + L++ N I+ P+ + D + A G Sbjct: 61 RKGHMFYIPLGMPHVFRPTSSNGKPLIVNNCIFSVKLLPKLIAFASDSRTASLLKQMEDG 120 Query: 113 QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT 172 +R + + ++ L + + + + L QL++ +R S + Sbjct: 121 TLGYRAITDRHDRFEKLFVSLYEQYAMQISGSAVYLHTLLLQLIIEFSRAIEHSQPITSE 180 Query: 173 SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 S ++ + L + + SER L++ FR+ TG + + YL+ VR+ Sbjct: 181 PSHPSFHDVLQYVEGQYMHELTLTRLAQISGFSERHLQRLFRRYTGQSWHHYLQTVRIRM 240 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++ LL+ + IS I+ + G++D + F+ VF R TG+TP Q+R Sbjct: 241 SRELLRTTTDKISMIAEKVGYKDMHSFNSVFKRSTGLTPGQYR 283 >UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJM2_CLOCL Length = 286 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 29/289 (10%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 DD F ++ V P+ EH+HD+ E+ G +++N+R Y I +GD+ I+ Sbjct: 10 DDSFFIEKVNSKVFYTMPR----EHSHDYYEIYYQLYGERYYIINNRSYYIKKGDIVLIN 65 Query: 70 ADDKH--SYA-SVN---------DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR 117 H +YA ++N + +L++II E +L ++ I N S H Sbjct: 66 KGVFHKTTYAGAINYERVLVGFKEHILKDIIPQEEFTELLSTFEKDISIINLSIQNQH-- 123 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHR---YTSDSLPPTSS 174 + +L HE++ + ++LL +L++ +NRH + S P++ Sbjct: 124 -------TFEVLFTKLIHENNNRLSSYETYSKLLLVELLININRHLEKGHVSYLEFPSAL 176 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + ++ + + LD + S L + F+ TG + Q++ R+ +Q Sbjct: 177 HKKVSEIAQYITDNCDKVLNLDILAHKFLISPYYLSRVFKDVTGFNLIQFINSERIKKSQ 236 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS-QKD 282 YLL + L I +I GF + +F+ VF T M+PS++R LNS QKD Sbjct: 237 YLLIETSLPIYEICEVVGFNSTIHFTRVFNSFTSMSPSKYRKLNSKQKD 285 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 13/252 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH--SYASVNDLVLQNIIYCP 91 H+HD ELV ++ G +++ YR+ G L I + H SY S ND V Q Sbjct: 26 HSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGS-NDKVRQQRTALR 84 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQ-----VIGQLEHESSQHVPFANE 146 +K + DW + G + + G + + R+ +I ++ +E+ + Sbjct: 85 FSIK-DTDWLCSALG--KDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMG 141 Query: 147 MAELLFGQLVMLLNRHRYTSDSLP--PTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 M + LF + ++ + R + D+ + + + + T + + LD + S Sbjct: 142 MVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSI 201 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S L ++F+Q TG +YL VR+ A LL + I+DI+ CGF DSNYF F Sbjct: 202 SRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFR 261 Query: 265 RETGMTPSQWRH 276 R G++P+++RH Sbjct: 262 RIKGISPNKYRH 273 >UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ86_9CLOT Length = 324 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 28/262 (10%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIYC 90 EHTH + E++ ++ G+ H+++ ++ D+ +I HS ++ ND+ ++ I Sbjct: 64 EHTHKYMEIIYMFSGSATHIIDKTEVKLEADDVLFIKQGTPHSASASGYNDIGIK-IFVL 122 Query: 91 PERLKLNL---DWQGAIPGFNASAGQP--------HWRLGSMGMAQ------ARQVIGQL 133 PE L+ L + A+ F A + H+ L + AQ R ++ Q Sbjct: 123 PEFLQYPLSMLNEDTALRRFIKKAAENDGKDKEFLHFHLQDLPDAQNLLENMTRSLLNQT 182 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 + + + + G L+M L+ YT P+S E+ + R Sbjct: 183 RN--------SKRILQATMGVLLMELSNRTYTITVGSPSSYESQIVLEALRYIEENYQTA 234 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +L+KFC+ + + + Q + T +YL++ R+ A YLL + I I E G+ Sbjct: 235 SLNKFCEHHNLPCYYVSRLMTQYSPYTFTKYLQRRRILQAAYLLTETDTPIEQIVVEVGY 294 Query: 254 EDSNYFSVVFTRETGMTPSQWR 275 E+S++F +F E GMTP ++R Sbjct: 295 ENSSHFHKLFKEEYGMTPKKYR 316 >UniRef50_UPI0001C35DF5 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35DF5 Length = 318 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 27/283 (9%) Query: 12 FFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 +F D ++ +V +P H H F E++I+ H + +PY I D+ + Sbjct: 33 YFDYDARSYSVNMEFP------HMHMFYEIMILLSPKAYHFIAGKPYSIINNDIVLLAPA 86 Query: 72 DKHSYASV----NDLVLQNIIYCPERLKLNLD-WQGAIPGFNASAGQPHWRLGSMGMAQA 126 H + +D ++ N + P+ L L+ + + FN P +R Sbjct: 87 ILHQTEYLPGPPSDRIIINFM-VPKHLLLHPGGYDTILSVFNDPV--PIFRFDLERQKTL 143 Query: 127 RQVIGQL-------EHESSQHVPFANEMAELLFGQLVMLLNR--HRYTSDSLPPTSSETL 177 Q+I QL E + +++ N+ E LF M Y S+ T+ Sbjct: 144 FQIINQLTDLSRTTEDPAVRNMMIHNKFTEFLFTLYQMRKENLYEEYNSERSIKEKIYTI 203 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 + + T L + DKF S L QF+ TG T+ QY++Q RV +AQYLL Sbjct: 204 TNYIQTHYYEDLSLAYLADKFF----ISSFYLSHQFKLVTGFTVVQYIQQTRVKNAQYLL 259 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 ++ L I+DI+ + GF + F+ VF R M+PS+++ +Q Sbjct: 260 LNTSLKITDIAEKIGFSSFSQFNRVFHRFCSMSPSEYKTFYNQ 302 >UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A1A9 Length = 309 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 13/254 (5%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 EH H F E V GNG ++ +R + + G LF +H S + L L + + P Sbjct: 48 TEHKHSFFEACYVLTGNGTYIEGEREFHLYPGTLFLSRPGVQHQIRSKDGLALCYVAFEP 107 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE----HESS--QHVP-FA 144 E ++ A A G P + + G QA ++ H S QH P Sbjct: 108 EETATG-EFYAAAFRLLAKQGNP---VVTEGARQASGLLWLSLLSLFHTGSGKQHPPQML 163 Query: 145 NEMAELLFGQLVMLLNR--HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 N +A L + + H S + ++ + + +L P +L++ Sbjct: 164 NSLAASLIVSFLTVHGPGFHHEPSGAEANDEGTSMFHQAELFIKDNLNEPLSLERVAGHL 223 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 + R L + FR+ + Y+++ RV A+++L H+ I +I+ CGFE +YF+ V Sbjct: 224 HITTRHLTRLFRKYGHQSFVHYVQEQRVQQAKHMLLHTDRQIKEIAVCCGFESVHYFTRV 283 Query: 263 FTRETGMTPSQWRH 276 FT + G+TP+++RH Sbjct: 284 FTSKLGVTPARFRH 297 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 14/252 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F E+ + G +ND Y +++G+L I H ++ + I C Sbjct: 24 HLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERI--CITF 81 Query: 94 LKLNLDWQGAIPGFNASA-----GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 K L Q F A QP+ R+ +I + E ++ +A Sbjct: 82 SKSFL--QPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYLA 139 Query: 149 ELLFGQLVMLLNRHRYTS--DSLPP---TSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 +L++ + R S D + P + + +++K + ++ +SP L++ + Sbjct: 140 SSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYCN 199 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S ++F+ TG +YL +R+ A LL H++L I++I+ GF DSNYF VF Sbjct: 200 MSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDVF 259 Query: 264 TRETGMTPSQWR 275 R G++P ++R Sbjct: 260 KRMKGISPCKYR 271 >UniRef50_C0YSE7 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YSE7_9FLAO Length = 284 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 22/259 (8%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F EL+I+ G G H LN+ + +GD+F + D H + I + + Sbjct: 25 HNHNFYELIIIEHGKGFHHLNNVTFPYKKGDVFILRPSDAHEFTITGTTRFIYIKFTEQY 84 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRL-------------GSMGMAQARQVIGQLEHESSQH 140 + WQ +P N + L A Q+ L +E S Sbjct: 85 I-----WQNHLPNQNNELKKMVQLLMEDHSFVYESVIKNKTDRAHLLQLARILLYEFSHK 139 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL--LDKLITRLAASL--KSPFALD 196 + E+ LF ++ +L R+ + + ++ L ++K++ + + + Sbjct: 140 NTYNKEITADLFSSVITILIRNTINNSTAKEWMTQNLSRIEKILYYINVNALDADKMKIG 199 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 +E S + +++TG ++ Q++ Q ++ A+ LL SR IS+I+ GF D+ Sbjct: 200 NLAEEFMLSPHYISIYIKKETGFSVQQHVMQHKIKTAEKLLLQSRYNISEIADRLGFNDA 259 Query: 257 NYFSVVFTRETGMTPSQWR 275 ++F+ +F M+PS+++ Sbjct: 260 SHFNKIFKTYKQMSPSEFK 278 >UniRef50_UPI00016C4EB1 probable transcription regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4EB1 Length = 289 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 105/255 (41%), Gaps = 22/255 (8%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN-DLVLQNI- 87 V +H F EL G G VL R + GD+ + H A + L L I Sbjct: 29 VMEPESHPFAELFYALDGRGTFVLAGRGHACGPGDVVVVPPGVVHQIADRDAPLTLYGIG 88 Query: 88 -----IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + C L+LN + G +PG A A+ R + Q+ HE + +P Sbjct: 89 VSAELLACDPELQLN-ERAGVVPGSRVLA------------ARVRAGLRQMFHEQTDTLP 135 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPP--TSSETLLDKLITRLAASLKSPFALDKFCD 200 L QLV L+ R + P + +++ + L P LD+ Sbjct: 136 GGRAKMVGLALQLVALVARSAPRPAAGAPRRETGREAVERFRSDLDRRFYEPPRLDRAAA 195 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 E S R + FR G +Y+ +VRV +A LL+ + I+ I+ ECG+ED + F Sbjct: 196 ELGLSRRSFTRLFRAAAGCPFAEYVERVRVEYACRLLRDTARGITSIAFECGYEDLSAFY 255 Query: 261 VVFTRETGMTPSQWR 275 F R TG +P +WR Sbjct: 256 RAFKRHTGQSPGRWR 270 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 116/288 (40%), Gaps = 32/288 (11%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 +L +D+ + V V H H+F EL V G G H LN Y ++ G L Sbjct: 8 RLTNEDYRLQPRAPVQVFHGIHPGTIPLHWHEFYELSYVVGGEGEHRLNGSAYPLSSGTL 67 Query: 66 FYIHADDKHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS--- 120 F + D H SV D L + N+I+ + NL HW G Sbjct: 68 FLLTPADFHELVSVEDKPLEIYNVIFTEAMMDDNLY---------------HWLFGGKLV 112 Query: 121 ----MGMAQARQVIGQLEH--ESSQHVPFANEMA-ELLFGQLVMLLNRHRYTSDSLPPTS 173 + Q RQ+ E E + +E+A +L++ LNR + +LP Sbjct: 113 LHAQLEEMQHRQIFADYERMREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTNG 172 Query: 174 S-----ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 + L + + + + L+ +A S + F + G + +YL+ V Sbjct: 173 TGNRQLNVNLQRALIYIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNV 232 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 R+ A+ LL+ S L +++I GF +F VF + GM+P Q+RH Sbjct: 233 RMQFAESLLRVSSLPVTEICYASGFNTLGHFERVFRQRKGMSPRQYRH 280 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 20/263 (7%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII---- 88 EH H EL ++ G + + DR Y I GDL I A++ H + I+ Sbjct: 32 EHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLVLIPANELHKTSDTGVPNHARIVLYYN 91 Query: 89 ------YCPERLKLNLD-WQGAIPGFNASAGQPHWRLGSM--GMAQARQVIGQLEHESSQ 139 Y E +L L + G+ F A Q R + G+ Q Q E Sbjct: 92 EKYFEQYGKEESELLLSPFLGSRRVFRL-AHQERLRFEQLLYGLLQEVQ-----ERPPGH 145 Query: 140 HVPFANEMAE-LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 +P + +AE LLF + N+ + S+PP+ + ++ + +A + P LD Sbjct: 146 EMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKAMEIASYVADHFREPLTLDSL 205 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + S L + F++ TG + +Y+ RV AQ+ L+ + I++I+ E GFE + Sbjct: 206 SRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLRETDERITEIAAEVGFESLSQ 265 Query: 259 FSVVFTRETGMTPSQWRHLNSQK 281 F VF ++P +R+ QK Sbjct: 266 FERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 24/250 (9%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL V G+G ++ D + I + DL I+ + H+ S + L+ I+ + Sbjct: 37 HTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKSSLEDPLEYIVLGVDG 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L +D F++ + R ++ + E+ + ++ + L Sbjct: 97 LNFVIDDANEYLLFHSDEMKDRLDF------YFRTILEETENSQKDY----EKVCQNLLN 146 Query: 154 QLVMLLNRHRYTSDSLPPTSSETLLDKLITR--------LAASLKSPFALDKFCDEASCS 205 LV+ L+R+ +S + P K+ +R + +S + LDK + A + Sbjct: 147 ILVVHLSRYASSSVEIFP------FHKMESRECSRAKRYIDSSFRENITLDKLAEIAQIN 200 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 + F + G++ YL Q R+ +Q LL + + ++ I+ +CGF S+YF+ F + Sbjct: 201 KYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSYFTQCFRK 260 Query: 266 ETGMTPSQWR 275 GMTP+ +R Sbjct: 261 SCGMTPTAYR 270 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 35/266 (13%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H E+ + G + + ++ Y I GDL I+ D H + D PE Sbjct: 35 HYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGHGD---------PEH 85 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGM---------------AQARQVIGQLEHESS 138 ++ +++ + G G P G +GM A Q++ ++ E Sbjct: 86 ERIVINFSDSFLG----KGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMADEIR 141 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYT-SDSLPPTSSETLLDKLITRLAASLKSPFA--- 194 + M ++L +L L+ +R T S SLP S L + IT + + +A Sbjct: 142 ERSASYEHMLQVLLTEL--LIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYADKI 199 Query: 195 -LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 L + S L + F++ TG TI YL R+ AQ LL + L I DI+ GF Sbjct: 200 TLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESIGF 259 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNS 279 E +F F + MT SQ+R +NS Sbjct: 260 ESLTHFDRTFKKIMNMTASQYRKINS 285 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 12/252 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL-VLQNIIYCPE 92 H H F EL+ V+RG+ ++ N+ I G++ ++ + H ++ D + NI++ Sbjct: 72 HKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPETLTDQDCVFNIMFRQN 131 Query: 93 RLKLNLDW---------QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 + +LD + S+ + G A A I +L E + Sbjct: 132 FFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASA-DTIERLIVECFEKQSC 190 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 + + L +L L R+ S S P + E L+ K+IT + S + L K ++ Sbjct: 191 YETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQES-PAEITLQKVSEQFQ 249 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S L + +Q TG ++ +R R+ A+Y L+ S L I DI+ G+ D ++F VF Sbjct: 250 YSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIALILGYNDVSHFYKVF 309 Query: 264 TRETGMTPSQWR 275 +E G TP+++R Sbjct: 310 KQEIGCTPTEYR 321 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 1/243 (0%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA-SVNDLVLQNIIYCPE 92 H H + E+ + GN ++N Y + GD I H + N V + ++ Sbjct: 30 HYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDCNSTVKRYNLFFTM 89 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 +L P L S+ A ++ L E+ + + Sbjct: 90 DFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQETVGQDSCSQAVIPAYI 149 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 ++ LL R+R S+E + ++ + P +L D S ++ Sbjct: 150 SLILSLLVRNRDHIQLQDLDSAENAIQASARYISTHFQEPVSLHMVADYVHMSPTYYSKK 209 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+Q TG+ +YL + R+ A LL H+ L +++I+ CGF D NYF F +E G++P Sbjct: 210 FKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDGNYFGDAFRKEFGLSPL 269 Query: 273 QWR 275 Q+R Sbjct: 270 QYR 272 >UniRef50_B9XB63 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XB63_9BACT Length = 272 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 18/244 (7%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F + ++ G G + + +I G+L ++ + +H++ +D P Sbjct: 39 HKHRFSQFLLYLSGQGTQQIKRQSSKIVAGNLVFLPPNVEHAFHRESD-------RRPIC 91 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L L+ DW+GA A+ L S + + RQ+I + H + A E + L Sbjct: 92 LALDFDWEGA-----AARNCSVVLLPSATLREGRQIISMISHLQREQ---AKERSLQLSV 143 Query: 154 QLVMLLNRHRYTSDSLPPTS--SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 +++ L+N S P S + K+ T L + L+ A L + Sbjct: 144 EILKLMNLLLEASGFGIPARAISSPITRKVNTLLNTPDYANVTLNSLARRAGYQHDYLNR 203 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 ++Q+G+T+ Q + + AQ LLQ +SD+S GF D NYFS F ++T +TP Sbjct: 204 LLKRQSGLTLGQLRSKNLLQRAQKLLQQPGS-VSDVSEALGFSDPNYFSRWFRKQTNLTP 262 Query: 272 SQWR 275 WR Sbjct: 263 RTWR 266 >UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CXM1_PAESJ Length = 279 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 5/252 (1%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIY 89 +F H+HD+ EL +V G G + ++ +++ G L I H + ++ + Sbjct: 28 LFISHSHDYDELTLVLDGEGYYSSPEQNIKVSAGSLILIPPGLHHGFVCTKPWRGVSVHF 87 Query: 90 CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE--M 147 ER+ L + G+ + H +L A QLE E + + + Sbjct: 88 NHERIPLQSRYLFH-AGYECNRIH-HIQLAEEDTEWAEISYSQLEKEWKKDRSSMDSFNI 145 Query: 148 AELLFGQLVMLLNRHRYT-SDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSE 206 + F +++L R++ S + + +T++ +++ + A S + + + SE Sbjct: 146 MRIAFETVIVLFQRYQALFSQTAGGKNDQTVIHEVLKEIHARFYSQLTVHELASKHFVSE 205 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 LR++F + G++ QY+ +R+ A+ LL+ + I IS+E GF S+ F F + Sbjct: 206 SNLRKKFTEIVGVSPKQYMINLRMEEAKRLLRQTDKAIESISSEVGFTSSSRFYDFFVKS 265 Query: 267 TGMTPSQWRHLN 278 G+TP +WR N Sbjct: 266 VGVTPFEWRKQN 277 >UniRef50_A4EK09 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EK09_9RHOB Length = 288 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 32/268 (11%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS-- 78 ++A R+P A H HDF E+ ++ G H +N ++ G L +I +D H++++ Sbjct: 24 SLAKRFPN---AAHDHDFFEVFLIESGQTSHWVNGETQQLEPGHLTFIRPNDVHAFSADR 80 Query: 79 VNDLVLQNIIYCPERLK-LNLDWQGAIPG--FNASAGQPHWR-LGSMGMAQARQVIGQLE 134 + N+++ E K L + I F++ A P L + A+A V QL+ Sbjct: 81 TKGCQIINVMFRVETAKHLTNRYAKTIESAFFDSRAALPEMHMLDPVRFARAINVAQQLQ 140 Query: 135 --HESSQHVP-----FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 H S + N +A+ G + N R+ +++ S+T+ K A Sbjct: 141 TAHRSLARIEEFLLVLTNRVADAAGG---IAQNAPRWFAEACSAAQSQTVFSKGAAGFIA 197 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + E V R + TG+T ++Y+ QVR+ +A +LL+ I D+ Sbjct: 198 AAGR------------SHEHVCRT-CKAVTGLTPSEYINQVRIEYAAHLLRSDERSIDDV 244 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWR 275 +CGF++S+YF +F R+ G TP +R Sbjct: 245 VNDCGFDNSSYFYRLFRRQYGTTPRAYR 272 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 12/254 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND-----LVLQN 86 EH+H+F E+ V G G+H + + G LF+I H + L++ N Sbjct: 34 GEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPKTPKKDRPLIVYN 93 Query: 87 II----YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + Y E L+ + I A G W + + +L E + P Sbjct: 94 CLLPASYLSE-LRDGFPYATEILDCFADEGL-SWFSVKDSTGEYHAMFRELYQEFAAKPP 151 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDE 201 + L +++ L RH+ + + L +D+ I + + S L + + Sbjct: 152 AYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYASELKLGELAAQ 211 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A SER + FR+ TGM++ +Y++ +R+ A LL + DI+ G+ D +F Sbjct: 212 AKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFFYR 271 Query: 262 VFTRETGMTPSQWR 275 +F ++TG+TP Q+R Sbjct: 272 LFKKKTGVTPRQYR 285 >UniRef50_A0Y392 Transcriptional regulator, AraC family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y392_9GAMM Length = 316 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 54/71 (76%) Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 SER L+++F Q TG++IN+Y+++VR+ A+ LL + +++IS G+E+S++F+ +F Sbjct: 243 SERNLKRRFTQATGISINRYVQEVRIDKAKKLLLSTDKTVNEISINVGYENSSFFTRLFK 302 Query: 265 RETGMTPSQWR 275 + TG+TP++WR Sbjct: 303 KNTGITPAKWR 313 >UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MA57_9FIRM Length = 294 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 51/298 (17%) Query: 12 FFASDQQAVAV---ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 F+ +D ++V QD H H + ELV + +G+ H + GD F + Sbjct: 7 FYQADDSGISVEHWTGSMSQDA---HMHKYYELVFIEKGSCTHTFCKEDTLLLPGDSFLV 63 Query: 69 HADDKHSYASVNDLVLQNIIYCPERL---------KLNLDWQGA-----IP-GFNASAGQ 113 + HS+A + N + PE L +L D +G P F A Sbjct: 64 RPETSHSFAIHEQTSIYNCQFYPEVLDEQFFSLVKELKADARGTQVLEKTPTSFQADINN 123 Query: 114 -------PHWR------LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLN 160 P+ R LG M AQ +Q ES E+ + + +L++++ Sbjct: 124 QGIVHLDPNERMFLLSILGGMQKAQEKQ-------ESYY------ELLKRKYLELILIIY 170 Query: 161 RHR----YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQ 216 R R + + P ++T++ + + + ++ P ++ + + S R+ F+ Sbjct: 171 RKRSDQQFKNYYSQPKQNQTIIMRTLAYIEENIAEPIDFNELARDENLSTNHFRKLFKDV 230 Query: 217 TGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 TG+ +Y+ ++R+ A LQHS L +S+I+ G D NYFS +F G +P + Sbjct: 231 TGLAPVEYINRLRITKACEHLQHSNLSMSEIAANVGIYDQNYFSRLFKNFMGCSPRHY 288 >UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L8_PAESJ Length = 274 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 40/251 (15%) Query: 44 VWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGA 103 V G G V+N + Y++ GD+F+++ D HSY LN W+ + Sbjct: 46 VLEGFGEVVVNGKAYKVEAGDVFFLYPDIPHSYKP-----------------LNQKWKVS 88 Query: 104 IPGFNASAGQPHWRLGSM-----GMAQARQVIGQLEH------ESSQHVPFANEMAELLF 152 FN + G + ++I LE ++ Q E ++LL+ Sbjct: 89 WVSFNGREADQMLLFAGISESGTGRLKTNELIKPLEQMLTLAMDNDQEADL--ERSKLLY 146 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKL---ITRLAASLKSPFALDKFCDEASCSERVL 209 G L+ L +Y L P+ S+ D++ + + +L+ P L + A+ + + L Sbjct: 147 GLLIDL----KY--QLLSPSYSDQEFDRVKPVLHYIENNLQRPLTLIELAGVATVTPQYL 200 Query: 210 RQQFRQQTGMTINQYLRQVRVCHA-QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 + F+Q + +Y+ Q R+ + Q + QH + + +I+ GFE S+YF VVF + G Sbjct: 201 CRMFQQTMNIRPMEYINQQRIKRSKQLMFQHPAMRMYEIAGRVGFESSSYFGVVFRKLNG 260 Query: 269 MTPSQWRHLNS 279 M P ++ L+ Sbjct: 261 MNPEAFKKLHG 271 >UniRef50_C0CZ81 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZ81_9CLOT Length = 305 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 17/255 (6%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY----ASVNDLVLQNII 88 +H H F E+ I+ + H++ PY I GD+ + H + + ++ N + Sbjct: 43 QHFHSFYEIHILLAKSASHLVEGIPYSIHAGDIVLLRPSLLHKTIYPQGAPSRRLIINFL 102 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQARQVIGQLEHESSQHVP--FA 144 Y E L D A GQ P +R A ++ Q+ S++ +P Sbjct: 103 YPQEYL----DSHPAFSRILEPFGQEIPIFRFDQEKTAILSDMLNQVFLLSTRSMPADIL 158 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFA----LDKFCD 200 N M F + + L R + + P E+ L + I ++ + + + ++ L+ + Sbjct: 159 NTMVHAEFTRFLYRLWELR-SFNVYVPEKFESPLSEKIYQITSYIHNHYSEELSLESLAE 217 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 + S L +FRQ TG T+ Y++ R+ AQY L ++R I+DIS CGF + F+ Sbjct: 218 QFYISTYYLSHRFRQVTGYTLIHYIQMTRIRSAQYALINTREKITDISAACGFTSFSQFN 277 Query: 261 VVFTRETGMTPSQWR 275 VF + G++PS +R Sbjct: 278 RVFRKFCGVSPSDFR 292 >UniRef50_D2QLM0 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QLM0_9SPHI Length = 310 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 35/269 (13%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 F HTH+ EL+++ G G H +N + GD+F + D H++A V Q +C Sbjct: 22 FPSHTHNHFELILIRSGTGHHHINGNRFVYQAGDVFLLGPLDCHTFA-----VNQKTCFC 76 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHW-RLGSMGMAQARQVIGQL---------------- 133 L + + G W ++ G+ + + ++G L Sbjct: 77 ------CLSFTDLYMASLSPMGTNTWPQIREHGLTKHQPLVGSLVTDGLEQQNLFALFQI 130 Query: 134 --EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLITRLAAS 188 +++Q P +N + E L ++ +++R PT ++ +L ++ T + Sbjct: 131 IMAEQNAQQSPLSNPVIESLMKTILSIVDRQLLQYQLGMPTAYGTASSLRQRIGTYIHRY 190 Query: 189 LKSP--FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 + P L+K D + S+R L F+QQTG +I QY+ + ++ + L+ S L +S Sbjct: 191 ITEPDYLRLEKMADVFNYSQRHLGALFKQQTGESIQQYIIRYKLQLVETRLRLSTLTVSQ 250 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I+ E GF D + + +F R TP+ +R Sbjct: 251 IADEFGFTDVCHLNKLFKRYYRQTPTGYR 279 >UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCV1_BACSK Length = 293 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 8/258 (3%) Query: 26 YPQDVFAE-HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 YP D H H CEL+IV+ G G V+N + I +G LF+ H A + Sbjct: 26 YPTDYNGYYHWHQGCELLIVFDGAGSVVVNQQMSPIKKGMLFFFQPFQLHHVAPASAAPY 85 Query: 85 Q--NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL--EHESSQH 140 + + + P + L A+ F + + + ++ I L H+ Sbjct: 86 ERATLHFDPLHAEKRLTAYPAMAQFFRQLKNGYNQDPFIDFSEDYFYIRSLCDMHDKMAE 145 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLL---DKLITRLAASLKSPFALDK 197 NE AE L+ LL+ ++ PPT + ++++ + L PF L Sbjct: 146 AASINERAEREELLLIQLLSYMQHQLKGRPPTKKLRHIHYAERIMGWIEDHLTEPFNLSL 205 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 + S+ + + FR++TG +I YL R+ A +LLQ + L I +IS G + + Sbjct: 206 LAQDLYLSKSYVSKVFRRETGSSITDYLTARRMKEACHLLQTTSLPIDEISQRIGLTNVS 265 Query: 258 YFSVVFTRETGMTPSQWR 275 YF +F R+T TP Q+R Sbjct: 266 YFIQMFKRKTNATPHQYR 283 >UniRef50_D2B8S3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B8S3_STRRD Length = 302 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 21/257 (8%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H HDF E+ ++ G G HV + + + RG + + H + DL + N + Sbjct: 30 HAHDFLEIAVIGSGYGRHVTSQGEHPLRRGQVIVLRPGAWHGFLDCADLTVANCCLSAQA 89 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMA----------QARQVIGQLEHE--SSQHV 141 L+ L IP G+ G+A +A IG LE + + Q Sbjct: 90 LRTELAALYDIPMLRRMLWTDPVASGTHGVAVTTVDPVAAEEAIAEIGLLERDLGADQGR 149 Query: 142 PFANEMAELLFGQLVMLLN---RHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 P + G+LV +L R P ++ + I R A+ P+ LD Sbjct: 150 P------GRVLGRLVTVLGVLADGRDPERETPESAIHPAVAATIARFEAAPAHPWRLDDL 203 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + L + F + G+T +L ++R A LL HS L + + G++D Y Sbjct: 204 ARAVNLDPAYLGRLFGRHVGLTPLGFLARLRAERAATLLAHSTLPAARVGAAVGWDDPTY 263 Query: 259 FSVVFTRETGMTPSQWR 275 F+ F G+TP+++R Sbjct: 264 FARRFRTLVGLTPTEYR 280 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 22/254 (8%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F EL +V RG G H+ + + + G +F +H + H+Y L L N ++ + Sbjct: 50 HKHNFYELAVVLRGAGTHLTDSQKLPLRPGSVFLLHPGESHAYEYSEPLTLMNFMFDSQI 109 Query: 94 LKLNLDWQGAIPG----FNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 L+ + G F + + + S +A+ ++ + ES Q A + Sbjct: 110 LRPYRKSLSGLAGYPLLFCPAEERRELCVDSATLAELDILLHAMAMESRQRSAGAELLLI 169 Query: 150 LLFGQLVM--------LLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 L++ + R R+ SD + + + + + +L K Sbjct: 170 SHLLNLLVLVLRKSCSYVERERFNSD----------IGIAVAFMRRNYQEEISLPKLARL 219 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A+ SE ++FR++ + Q+L +R+ A L S + I +I+ GF DS YFS Sbjct: 220 ANLSESSFFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATGFSDSLYFSR 279 Query: 262 VFTRETGMTPSQWR 275 F R+ G++P +R Sbjct: 280 QFRRQVGVSPKNYR 293 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 31/254 (12%) Query: 34 HTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY--ASVNDLVLQNIIYC 90 H HD CEL++V +G G+++++ R Y +G+L ++ H S ++LV YC Sbjct: 2 HEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLV----TYC 57 Query: 91 PERLKLNLDWQGA---IPGFNASAGQP---HWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 L +D A +P QP H+ A+ + + +E E+ H A Sbjct: 58 IAIGGLRIDGLPADHLLPDGYCPV-QPLRQHF-------AEVQSLFDAIEKEAKSHAEIA 109 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLITRLAASLKSPFALDKFCDE 201 N + L +L L + PT + +DK + K L Sbjct: 110 NYLTMALITKLAAFLREEGLQEEQQTPTLAARARAFIDK-------NYKEAIRLGDIATA 162 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + L F+ + G++ +Y+ R+ AQ LL ++ + I+ I+ + G+ +SNYF Sbjct: 163 THTNAYYLSHLFKAEIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQN 222 Query: 262 VFTRETGMTPSQWR 275 VF MTP ++R Sbjct: 223 VFKGALDMTPGEYR 236 >UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3J7_9BACL Length = 281 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 8/249 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLVLQNIIYCP 91 H HDF EL +V +G LH++N IT G L +I D H Y + +D N+ Y Sbjct: 36 HCHDFYELFLVTQGQALHIVNGEAVPITEGTLVFIRPQDIHCYEKLQEHDCEFINLCYTR 95 Query: 92 ERLKLNLDWQGA--IPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 E + + G+ P S+ P L S G + ++ +LE + V ++A Sbjct: 96 EVIHEVFAFLGSSITPENLLSSVLPPVTLLSTG--EKERLTDRLERINL--VQDQLQVAG 151 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 LL LV LL ++ + + L+ L+ ++ + + + + S + Sbjct: 152 LLRAVLVELLIQYFWKYQQTDTKAYPLWLESLLLQMQRKENFSEGVQRMYELSERSPGHI 211 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 + FR T +Y+ ++R+ +A+++L +RL I+DI+ GF + +++ +F +E G+ Sbjct: 212 NRVFRSLLHTTPVEYINRLRLDYAKHMLVTTRLNITDIALSAGFNNLSHYYHLFKKEFGI 271 Query: 270 TPSQWRHLN 278 TP +R+L+ Sbjct: 272 TPLAFRNLH 280 >UniRef50_Q98JA7 Probable transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q98JA7_RHILO Length = 326 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 5/128 (3%) Query: 156 VMLLNRHRYTSDSLP-----PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 +++L+R R + D P P +S + + + + ++L+ ++ + +CS R L Sbjct: 190 ILVLDRIRSSRDVQPVGDLFPAASSRSVKRALLLMESNLQETLSVAEIATRLNCSRRQLE 249 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 + F + G+ +RV HA+ LL+ S L I DI+ CGF ++ +FS VF ++TG+T Sbjct: 250 RLFGTELGIGPMAAYLALRVHHAKSLLEGSDLQIGDIAYRCGFTNAGHFSRVFRQQTGIT 309 Query: 271 PSQWRHLN 278 P+ RH N Sbjct: 310 PTHLRHPN 317 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/268 (22%), Positives = 124/268 (46%), Gaps = 16/268 (5%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA----SVND 81 Y ++ +H HD E+ + G + + + Y + +G L +++ H S +D Sbjct: 22 YEYNMPTKHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGTSYHD 81 Query: 82 LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS--Q 139 +L + P + ++ F + H+ + + R++ L S+ Q Sbjct: 82 RILIELKEEPFASFFSFFGDLSLKDFFSK----HYGVLELEEKDQRRIERLLTSISTEIQ 137 Query: 140 HVPFANEMAELL-FGQLVMLLNRHRYTSDSLPPTSSETL-----LDKLITRLAASLKSPF 193 + E++ ++ +L++ R + +++ P ++ T +D++ + + + +P Sbjct: 138 NKSIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNNCTNPI 197 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +LD S+ L + F++ TG T+N+Y+ RV AQYLL +S IS+IS + GF Sbjct: 198 SLDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISAQLGF 257 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNSQK 281 E YF VF + T +P ++R N ++ Sbjct: 258 ESITYFERVFKKYTESSPLKYRKQNRKE 285 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 26/286 (9%) Query: 14 ASDQQAVAVADRYPQDVFAE------------HTHDFCELVIVWRGNGLHVLNDRPYRIT 61 A ++ V +A YP +F H H+ E+ + G G +++N + + Sbjct: 9 AIPKEKVILAKNYP--IFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIINGQKFEFQ 66 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL--- 118 +GD+ I+++D H DLV+ I + NL + + G+ + L Sbjct: 67 QGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFSPFREMGKHYMNLIPR 126 Query: 119 GSMGMAQARQVIGQLEHE-SSQHVPFANEMAELLFGQLVMLLNRH-RYTSDS-LPPTSSE 175 M + R ++ +L+ E + +A + LL Q + +NR R + P+ SE Sbjct: 127 DHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLL-QFLATVNRQCRIEGEGGSEPSISE 185 Query: 176 TLLDKL---ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 L+K+ I + + P+ L++ S + F++ GM YL +R+ Sbjct: 186 RQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLIHIRLEQ 245 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP--SQWRH 276 A +L+ + + D++ ECGF F+ +F + GMTP SQ +H Sbjct: 246 AVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQH 291 >UniRef50_A6LDH9 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LDH9_PARD8 Length = 292 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP---TSS 174 L A+ ++I +++ E + + L + +MLLNR S++LPP T S Sbjct: 126 LDKKAYARISELISEIDKEIKNYQSKDKHLLRALLYETLMLLNRLYSNSNALPPDTNTRS 185 Query: 175 ETL-LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 +++ +D+ I + S K ++ + D+ + L + + TG+ QY+ + + Sbjct: 186 KSIYVDRFIELVNHSFKQDHSIRSYADQLCITPNYLNEIVKNATGINAKQYILNKILIES 245 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + LL ++ L IS I+ G+ED +YF +F +T MTP +R Sbjct: 246 KRLLTYTDLPISAITEALGYEDPSYFIRLFRSQTNMTPLNYR 287 >UniRef50_Q8KL73 Putative transcriptional regulator protein, AraC family n=1 Tax=Rhizobium etli CFN 42 RepID=Q8KL73_RHIEC Length = 294 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 5/153 (3%) Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITR 184 ARQ+ G+L H+ S +FG LL R TS L S T+L ++I R Sbjct: 143 ARQIAGELSHDDSVGSLIVEGHLAAIFG----LLQRRSGTSGRLSRGGLSPTVLKRVIGR 198 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + A + P ++ +EA + + F+Q G T + Q R+ LL+ + + + Sbjct: 199 IEAHIDRPPSVRALAEEAGLTYEHFSRAFKQSQGSTPYGFYNQRRLERVTDLLRTTAISV 258 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 ++I+ CG+ ++ S F RETG +P+++R L Sbjct: 259 TEIAIACGYSSGSHLSTRFRRETGFSPAEYRAL 291 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 31/262 (11%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP-- 91 H H E ++ G + D Y+I GDL ++ +D H + ++ P Sbjct: 36 HYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQ---------PNH 86 Query: 92 ERLKLNLDWQGAIPGFNA-------------SAGQPHWRLGSMGMAQARQVIGQLEHESS 138 ER+ L+ D +P F+ ++ P +L + L E Sbjct: 87 ERIVLHYD----LPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQ 142 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP---TSSETLLDKLITRLAASLKSPFAL 195 + P + ++++ RH SLP T + + +I + + P L Sbjct: 143 ECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPL 202 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 D+ + S+ L + F++ TG +QY+ R+ A+ LL+ + I+ IS CGFE+ Sbjct: 203 DELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFEN 262 Query: 256 SNYFSVVFTRETGMTPSQWRHL 277 ++F VF +G++P +R L Sbjct: 263 FSHFGKVFKELSGLSPRDYRKL 284 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 5/151 (3%) Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT---SDSLPPTSSETLLDKLITRL 185 ++ L HE+ Q +++ + L Q+++L+ R + T DSL SE + K + Sbjct: 134 LLSHLSHENGQEDAYSHVQQQSLLFQILVLIGRCQDTQQEKDSL--NDSEAAIVKAARYI 191 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + LD ++ S ++FR TG +Y+ +RV A LL+++ ++ Sbjct: 192 NLQYREHLTLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVT 251 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I+ CGF D NYF VF + TG++P ++R+ Sbjct: 252 SIAIACGFSDGNYFGDVFKKLTGLSPREYRN 282 >UniRef50_C9NPJ0 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPJ0_9VIBR Length = 331 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 58/102 (56%) Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 SE L KL+T + L P L +A+ SER L ++F +TG + NQ+L R+ A Sbjct: 219 SENNLYKLLTWIKEHLHRPLTLKDLAQKATVSERTLSRKFLAETGESPNQWLLNARIDAA 278 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 Q LL++S L + I+ + GF + F F +TG+TPSQ+R Sbjct: 279 QALLENSDLNVDQIAYKTGFGTPSNFRARFKNKTGLTPSQYR 320 >UniRef50_D1TC99 Putative transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TC99_9BURK Length = 297 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 20/254 (7%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F +V V G+G H+++ Y + LF++ H +A D + I + E Sbjct: 44 HRHEFYHIVWVESGSGHHIIDSIRYEVRPNTLFFMAPGQIHDFALSEDTIGHAISFSSEF 103 Query: 94 LKL---NLDWQGAIPGFNASAGQPHWRLGS---MGMAQARQVIGQLEHESSQHVPFANEM 147 N Q IP ++ R+ + M AQA+ + L+ ++++ Sbjct: 104 FAFKVQNRHSQTEIPVYDFE------RIPNTVYMSDAQAQDLRRVLDGINAEYQGEEAGY 157 Query: 148 AELLFGQL-VMLLNRHRYTSDSLPPT-SSETLLDKLITRLAASLKSPFALDKFCDEASC- 204 ++++ L V+L+ R D++ SS ++L L R + L+ FA +C Sbjct: 158 EDVIWSYLRVLLIKSARLGGDAVTEVNSSRSVL--LSRRFKSLLEKHFATIHDVARYACL 215 Query: 205 ---SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 +ER L + RQ G T + +R+ + A+ LL HS + +++I+T+ F+D YFS Sbjct: 216 LNVTERALNEATRQALGSTAAKLIRERVMLEAKRLLLHSEVNVAEIATQLAFDDPAYFSR 275 Query: 262 VFTRETGMTPSQWR 275 F + TG +P +R Sbjct: 276 CFRKHTGRSPIDFR 289 >UniRef50_UPI0001969689 hypothetical protein BACCELL_01403 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969689 Length = 1335 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 173 SSETLLDKLITRLAASLKSP-FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 S E LL+ + + +L P F ++KFC E + S+ L ++ R TG +IN++++ +R+ Sbjct: 1227 SDEELLNNAVNLVLKNLSDPEFGVEKFCTELNMSKASLYRKLRATTGQSINEFIQNIRLK 1286 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +A +L + IS+I+ E GF D YFS F + +P WR Sbjct: 1287 YAARILIETDKNISEIAYEVGFSDPYYFSRAFKKCFAQSPQHWR 1330 >UniRef50_C0CYV6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CYV6_9CLOT Length = 410 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 52/99 (52%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 L+ + IT P L F D ++ L FR++TG T+ Y+ VR+ HA L Sbjct: 306 LIQRCITYTDFHYAEPLTLSFFADMCHVTKSYLSNLFRKETGSTLTDYIHAVRLRHALVL 365 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L + + I ++ CG+ D NYF +F RE G++P Q+R Sbjct: 366 LNSTTIPIQVVAASCGYSDLNYFIKLFKRENGISPKQYR 404 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 38/272 (13%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--------- 80 + + H HD E+ + G + + DR + + G L I+ D H + Sbjct: 28 MLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLL 87 Query: 81 ----DLVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 D +L + +I + L +N ++ IP +A L M I ++E Sbjct: 88 NFSKDYLLSSPYVIALLDGLFMNNNY--VIPFLSAEQQYVEVLLDKM--------IHEIE 137 Query: 135 HESSQHVPFANEMAELLFGQLV-----MLLNRHRYTSDSL-PPTSSETLLDKLITRLAAS 188 H+S+ F + LL LV + NRH D L PP+ + +++ + + Sbjct: 138 HQST---GFQVALQALLMDLLVYTSRYIESNRH----DVLAPPSQVHEKISQIVQYINTN 190 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 ++P L S+ L + F+Q TG T +Y+ +R+ AQ LL+ + + DIS Sbjct: 191 YQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDIS 250 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 GF ++F VF T +P +R LN++ Sbjct: 251 EAVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C6D075 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D075_PAESJ Length = 295 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 27/258 (10%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H + E+ V G G + D Y + G LF H S N + L + Y Sbjct: 44 HKHSYYEVCYVLSGEGEYQDEDTVYGLEAGTLFVSRPGVWHQIRSENGVGLMYVAY---- 99 Query: 94 LKLNLDWQGAIP------GFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE- 146 LD +G+ G N +G ++ + +G H S Q P+ NE Sbjct: 100 ---ELDPEGSREEDFRRYGRNLESGNVVFKNADYTRS-IHYWLGLYHHASCQ--PY-NEI 152 Query: 147 -----MAELLFGQLVMLLNRHRYTSDSLPPTSSET----LLDKLITRLAASLKSPFALDK 197 MA +L LV + S P S+++ +L + + +L P +++ Sbjct: 153 EDLTMMAGILLTSLVQPFGQEGNVSSPSPARSTDSTRYAVLRQSKQYIRDNLSRPLKIEE 212 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 D + S R L + F+ G T YLR R+ HA+ LL+ S + +I+ + GF+ + Sbjct: 213 VADYMNLSTRQLSRLFQMDGGDTFLSYLRNERLKHAEILLKTSLASLKEIAADSGFQSVH 272 Query: 258 YFSVVFTRETGMTPSQWR 275 YF+ VFT + GM P ++R Sbjct: 273 YFTNVFTEQMGMPPGEYR 290 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 58/101 (57%) Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 +++D+ + + + +LD E S + F+Q+TG +YL ++R+ +A+ Sbjct: 428 SIIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARE 487 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LLQ SRL I +I + G+ D NYFS +F + G+TPS++R Sbjct: 488 LLQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRE 528 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 28/268 (10%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI----------HADDKHSYASV- 79 F H HD E + + G+ ++ + + +T GD I + K SY ++ Sbjct: 35 FYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSKISYVALV 94 Query: 80 --------NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 N L I + +K L ++ I N + ++ + + G Sbjct: 95 FNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYG 154 Query: 132 -QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLK 190 QLE + S F+ E G + + LN Y SD + + L ++I + + K Sbjct: 155 FQLEIKGSLFSIFSTIFKE---GYISLNLNSENY-SDLIKVEN----LKEVIKYIQTNYK 206 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 +P ++ + D A SE + F+ QTG T QY+ R+ A LL + L I++I+ E Sbjct: 207 NPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYE 266 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRHLN 278 GF D +YF F + ++P+++R N Sbjct: 267 VGFGDVSYFIKTFKKFLSISPTKYRKSN 294 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 55/108 (50%) Query: 168 SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 ++ +T + K+I + + LD E + S + F+ QTG YL Sbjct: 417 TINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYLTN 476 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +RV A+ LL+ + I ++ + G+ D NYFS +F + TGMTP+++R Sbjct: 477 LRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYR 524 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 16/266 (6%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ 85 YP+ + H H E++ V +G G ++ D ++GDL ++ HS S D + Sbjct: 56 YPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPPDGGEE 115 Query: 86 NIIYCPERLKL---NLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS---- 138 + LK+ N+ ++ ++ S + ++ R + + Sbjct: 116 SDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNLLEDACRGIKFTITRSGKIIKL 175 Query: 139 -QHVPFANEMAELLFG----QLVMLLNRHRYTSDS----LPPTSSETLLDKLITRLAASL 189 + +P A + +++ Q++ N +Y + S P ++K+I L Sbjct: 176 LKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERMEKVIAYLNKHY 235 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 LD+ + + + F++ TG T +Y+ +R+ +A LL S + IS IS Sbjct: 236 TESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLNSSMMNISQISA 295 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWR 275 CGFE +F+ +F R TGMTP+ +R Sbjct: 296 TCGFESPVHFNRIFKRVTGMTPTFYR 321 >UniRef50_P54722 Uncharacterized HTH-type transcriptional regulator yfiF n=1 Tax=Bacillus subtilis RepID=YFIF_BACSU Length = 314 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 14/252 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F E+ V RG G ++ DR Y + +F + H S L L + + Sbjct: 44 HKHSFYEICYVVRGEGYYLEGDRTYPLREQTIFLSKPEHLHQIKSETGLFLFYVAFELSE 103 Query: 94 LKLNLDW--------QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + +W Q G+P L M QA Q + + E H+ A Sbjct: 104 DQSSAEWIKVMEEVKQSPFITMQLKDGEPPGLLWKTLMLQAAQPVNAFDKEILSHLSHA- 162 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 L+ + L + P +S LL ++ + +L P L S Sbjct: 163 ----LILSLIQTFLPYAQRPKQKQPIHTSSALLTEVKLHIKDNLSQPLKLTDVASHFHIS 218 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 R L + F + G++ +++++ ++ A LL+ + L I +I+ E GF +YF+ VF+ Sbjct: 219 GRHLSRLFAAELGVSYSEFVQNEKINKAAELLKSTNLSIKEIAEEIGF-SVHYFTRVFSA 277 Query: 266 ETGMTPSQWRHL 277 + G +P +R L Sbjct: 278 KIGSSPGLFRSL 289 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 21/261 (8%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLVLQNIIYCP 91 H HD+ ++ V +G LH + + Y I +GD+F I HS + D+ + + P Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 92 ERLKLNLDWQGAIPGFNASA-----------GQPHWRLGSMGMAQARQVIGQLEHESSQH 140 + Q F A Q L S+ R V+ + E + Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERR 166 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET------LLDKLITRLAASLKSPFA 194 PF L LV+L R + L E ++ +++ + + Sbjct: 167 TPFFQ--ISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMN 224 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 L+ C ++ S F++ TG T N+YL +R+ A +L+ L ++D+ GF Sbjct: 225 LNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFN 284 Query: 255 DSNYFSVVFTRETGMTPSQWR 275 + +YF +F + TG++P+ +R Sbjct: 285 ELSYFCRIFKKYTGISPTDFR 305 >UniRef50_C4Z0X2 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0X2_EUBE2 Length = 249 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 21/249 (8%) Query: 47 GNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER--LKLNLDWQGAI 104 GN +++R + ++ G++ +I A+ H + + +LV PER ++ + D+ I Sbjct: 4 GNCTISIDNRLFTLSEGNIIFIPANSVHRTSYIGELV-------PERTYIEFSKDYIETI 56 Query: 105 PGFNASAGQPHWRLGSMGM--AQARQVIGQLEHESSQHVPFANEMAELLFGQL-----VM 157 H G + + R+ I L E + + ++ QL + Sbjct: 57 SQTLGKNWAEHNLWGHILYIEKEKREKIDFLFREIQKEYDIVDGYSDCCIRQLFQYLIIN 116 Query: 158 LLNRHRYTSD--SLPPTSSETLLDKLITR---LAASLKSPFALDKFCDEASCSERVLRQQ 212 L+ R T D S + +I +A + K+ L + + + Sbjct: 117 LIRLDRNTKDIKEFITNSDNKINQNMIIAAKYIAENFKNDITLKDVASHLNLNPSYFSSK 176 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+ + +YLR +RV HA++ L + L +SDI++ECGF +SNYF F G++PS Sbjct: 177 FKAFNNIGFAEYLRNIRVNHAEWYLIETDLSLSDIASECGFCNSNYFGDTFKLVNGISPS 236 Query: 273 QWRHLNSQK 281 ++R N K Sbjct: 237 EFRKNNKPK 245 >UniRef50_Q6LUY4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUY4_PHOPR Length = 367 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 7/122 (5%) Query: 161 RHRYTSDSLPPTSSETL---LDKLITRLAASLKSPFALD----KFCDEASCSERVLRQQF 213 R RY ++L ++ T +D +++R +++ F L+ + D S + L +F Sbjct: 232 RLRYAPETLYEAATTTHCNHVDDIVSRATLFIRNNFHLNINIKQVTDYCRTSRKTLDTRF 291 Query: 214 RQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQ 273 G+T +QYL +VRV A+YLL HS+ + I+ +CG+ + +Y + VF ++ G++PSQ Sbjct: 292 LAAQGITAHQYLTEVRVARAKYLLAHSQNKLDSIALQCGYPNQSYLTQVFGKQLGVSPSQ 351 Query: 274 WR 275 +R Sbjct: 352 YR 353 >UniRef50_C4Z6Z4 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z6Z4_EUBE2 Length = 403 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 56/97 (57%) Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 +I ++ +L +L+ E + + + F+++TG T+ ++ R+ HA YLL + Sbjct: 305 IINYISFNLTDDLSLNTISAEFALNSSYVSSLFKRETGSTLTNFVNNKRIEHAIYLLNTT 364 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +L I DI+ +CG D NYF+ +F + MTPSQ+R + Sbjct: 365 KLPIQDIAVQCGITDVNYFTKLFKKIKNMTPSQYREM 401 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 121/255 (47%), Gaps = 19/255 (7%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F EL+ + +G G + + +L ++ + +H+ S + L+ I + Sbjct: 37 HAHHFTELLYITKGKGTFIFYKEEIPVQEHNLIIVNPNIEHTEKSDTNHPLEYIALGIQG 96 Query: 94 LKLN-LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 L + ++ + N Q ++ + +Q++ ++E+ + + E+L Sbjct: 97 LSFSSIENPSPVTIHNYKQDQKNF------LFYLQQLVEEVENHQEDYDLIIQNILEIL- 149 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF----ALDKFCDEASCSERV 208 LL R S ++ TS++ + +K I + +K F +LD + ++ Sbjct: 150 -----LLKMMRKKSFNVEKTSTQKI-NKDIEFIKNYIKQHFHENISLDTLASISHINKYY 203 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L FR+ G++ +YL Q R+ ++ LL+ + IS+IST GF ++F+ F RET Sbjct: 204 LSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSFFAQSFKRETN 263 Query: 269 MTPSQWRH-LNSQKD 282 ++PSQ+R+ +NS K+ Sbjct: 264 LSPSQYRNAINSSKN 278 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 14/249 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL V G G+ + + + DL I+ +H+ ++++ + I++ E Sbjct: 37 HTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEHTEKTMSNDPMTYIVFGVEG 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMG--MAQARQVIGQLEHESSQHVPFANEMAELL 151 L + Q A G ++ GS Q++ + E + P + L Sbjct: 97 LAFYFNSQNAA----NPKGYSYYNYGSAKTHFINFSQIMIK---EFNARKPGFEAICHGL 149 Query: 152 FGQLVMLLNRHRY---TSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 L++ + R ++ SD+ S E + K + A+ LD + ++ Sbjct: 150 LQVLLVYITREQHLSVISDTTLQISKECFVAK--KYIDANYAKNITLDLLAEITHINKFY 207 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L F + G + YL + R+ ++ LL S I+++++ GF +YFS +F + TG Sbjct: 208 LSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSYFSQIFRKNTG 267 Query: 269 MTPSQWRHL 277 M+P Q+R L Sbjct: 268 MSPLQYRKL 276 >UniRef50_C0A9P7 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9P7_9BACT Length = 257 Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 23/252 (9%) Query: 24 DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV 83 +R+ + AEH H F +L++ G G ++ R Y GDLF I H +A Sbjct: 27 NRHREAEVAEHEHPFTQLILYLTGEGGQIVRGRRYEARAGDLFVIPPHVPHGFAMAG--- 83 Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 L L LD+ PG H RL + ++ G L ++ P Sbjct: 84 ------TSRPLNLVLDYDTIRPGKRVV----HRRLPQQSL---NELHGLLARVPTKGRPT 130 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 ++ ++ + LL R+ P SE L+D R+ A L++ +L + A Sbjct: 131 LSDYPTII-AVIARLLEPSRHQQVEAP-APSEPLVD----RIRADLRAAPSLGEVARRAG 184 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 L ++ +++ G+ + Q R+ AQ L+ I+D + + GFED NYF+ F Sbjct: 185 YVRDALSRKLKREHGLGLRAMRDQERLQTAQQALR-GAASIADAAAQAGFEDPNYFARWF 243 Query: 264 TRETGMTPSQWR 275 ++TG PS WR Sbjct: 244 RKQTGQPPSVWR 255 >UniRef50_C6BWQ4 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWQ4_DESAD Length = 296 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 4/251 (1%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 DV H H+F + V G+G V++ Y I G L+++ H + N + ++ Sbjct: 35 DVQEAHLHEFYVVHYVSAGSGSCVIDFETYDIIPGSLYFVSPGQLHLWNPENIVDGFVMV 94 Query: 89 YCPERLK---LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + LK + + FN+ P + L + A+ V+ L E S P Sbjct: 95 FTDDFLKSPEAPIHSAYELEFFNSVINSPMFMLSTDQKAELGSVMSSLCREFSSKKPGFE 154 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP-FALDKFCDEASC 204 + F L++ L R P E + + +L ++ SP + + + + Sbjct: 155 TVLRSYFHILMVCLQRMFADRMQRPGARVENPMVREFKKLVSAHHSPQLRVQDYAERMNV 214 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S L ++ T MT Q +R + A+ +L +S +S+I E FED +YF F Sbjct: 215 SVSRLSAVIKEVTSMTPGQIVRNELINTAKRMLANSDKNVSEICYELKFEDPSYFGRFFK 274 Query: 265 RETGMTPSQWR 275 RETG TPS +R Sbjct: 275 RETGFTPSVFR 285 >UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RPM5_9MOLU Length = 286 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 18/262 (6%) Query: 24 DRYPQDVFAE----HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 D Y +D E H H E++I G+ + +N +I G+++ I++ D H+ ++ Sbjct: 28 DFYIEDNIGEPIEKHWHRSIEILIPLYGSFILWINGNKVKIIAGNIYIINSQDIHAIQAI 87 Query: 80 NDLVLQNIIYCPERLKLNLDW--QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHES 137 IY L++ D+ + QP+ ++ + MA+ +I E + Sbjct: 88 EG----ERIYKGYALQIKYDYLRESYHDIDKIYFQQPNQQINKLLMAKIIDIINFYESDD 143 Query: 138 SQHVPFANEMAELLFGQLVMLL----NRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 P+ N + LV LL ++ R + + + + K+I L + + Sbjct: 144 ----PYNNIRVKSHIQMLVFLLLDNLSKKRIGYLEVKDSKYKDRITKIIKYLENNYQEDL 199 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 ++ DE SE L + F++ G T+ +YL +VR+ HA+ L + + DI+ GF Sbjct: 200 SVKMIADEFGLSEGYLSKLFKESLGATVKEYLSRVRLWHAEEQLVETDYPVIDIAIGNGF 259 Query: 254 EDSNYFSVVFTRETGMTPSQWR 275 + F+ F R+ +TP+++R Sbjct: 260 PNVKSFNQAFKRKNVITPAKYR 281 >UniRef50_C7IMV0 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IMV0_9CLOT Length = 295 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 8/163 (4%) Query: 121 MGMAQARQVIGQLEH--ESSQHVPFANE--MAELLFGQLVMLLNRHR----YTSDSLPPT 172 +G+ Q ++ L+ + S++V F N+ + +L++++N+H ++++P T Sbjct: 126 VGLKQIDKIDFLLKQIMDISENVYFLNKDFIYRSAILELLLIINQHSSKVLLCNNTMPNT 185 Query: 173 SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 + T ++ +I+ L + + + + L ++F+++ G+T YL +VR+ Sbjct: 186 DNSTGIEDVISYLHSFYSHNITIATITRNFNTNRTTLSKKFKEKLGVTPIDYLNRVRITK 245 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 A LLQ S + I+ I + GF + NYF+ VF ++TG+ P ++R Sbjct: 246 AALLLQESNMPINQIMIKVGFNNRNYFNKVFKKQTGLRPGEFR 288 >UniRef50_B8I029 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I029_CLOCE Length = 294 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 14/254 (5%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI-IY 89 F H HDF +++I GN ++ + + YR+ D+ ++ A+ H D + I I+ Sbjct: 29 FEHHYHDFNKIIIFINGNVIYNIEGKNYRLKLWDVLFVPANQVHKPIIAPDNEYERIVIW 88 Query: 90 CPERLKLNLDWQGA-----IPGFNASAGQPHW-RLGSMGMAQARQVIGQLEHESSQHVPF 143 + L+ G + FN + + H RLG + + ++G LE E Sbjct: 89 INNKF---LEEHGTPKNDLLTCFNMAREKRHLVRLGPNSLNNIKSILGNLEKELKNVTFG 145 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLP---PTSSETLLDKLITRLAASLKSPFALDKFCD 200 + +A LF Q ++ +NR D + + K+I + +L ++ + Sbjct: 146 SGILANALFVQFMVYINRLYLKPDKQVEDIEVEFDEQIQKVIHFINENLSDDLSIAALSE 205 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 ++ L +F+ TG +I+ Y+ R+ + L++ + S + ECGF D + F Sbjct: 206 RFYINKYYLMHKFKANTGYSIHSYVNNKRLQKSADLIKSGKSP-SYAAGECGFNDYSSFL 264 Query: 261 VVFTRETGMTPSQW 274 F++ GM+P ++ Sbjct: 265 RSFSKMYGMSPRKY 278 >UniRef50_C4G4K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4K9_ABIDE Length = 523 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 44/64 (68%) Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F++ TG TINQ++ +VR+ A+ LL+ R ++ I+ + G+ D+NYFS F +ETGMTP Sbjct: 458 FKKDTGKTINQFITEVRIEKAKALLRKDRTPLTSIAEKIGYHDANYFSKAFKKETGMTPK 517 Query: 273 QWRH 276 +R Sbjct: 518 AFRE 521 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 1/130 (0%) Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 E+ + Q+++L+NR S P + ++++K +T L P ++ E + Sbjct: 149 ELCKYYLIQILILMNRGM-KEASAPYNNHVSIINKTVTYLHEHYNEPISIIDLAKENHLT 207 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 F++ GM+ YL +R+ A+ L + L ISD++ G+ D+ YFS +F R Sbjct: 208 PNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSDAFYFSRIFKR 267 Query: 266 ETGMTPSQWR 275 +TG++P Q+R Sbjct: 268 KTGLSPQQYR 277 >UniRef50_D2QJS7 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJS7_9SPHI Length = 278 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/261 (21%), Positives = 118/261 (45%), Gaps = 25/261 (9%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 A H H + E++ + +G+G+H +N + + GD+F + +D H + + ++ +C Sbjct: 23 AVHKHTYFEIIFILKGHGIHNINGNTFGYSEGDVFLLGPEDYHDFT-----IQESTEFCF 77 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQ------------ 139 R +L A G + QP + +Q+R I + + E + Sbjct: 78 IRFHESLHEHSA--GDKDTPWQPIIKTLLTTSSQSRGTIVEDKQEKQKLHYLLTVLEEEY 135 Query: 140 ---HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP--FA 194 P+ + + L ++M+L R+ + S SL + + ++ ++ + + P Sbjct: 136 KRDQSPYFAIIRDSLLRSMLMILARNLF-SHSLANSQTTDSVEAILMYIRQHIYQPGKLT 194 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 +D D + + F++QTG ++ QY+ + ++ + L +S L ++ I+ E G+ Sbjct: 195 IDHLADVFHYAPAYISLFFKKQTGESLKQYIIKYKIKLIEARLLYSSLNLAQIADEFGYT 254 Query: 255 DSNYFSVVFTRETGMTPSQWR 275 D ++ F + TG TPS +R Sbjct: 255 DESHLCKQFRKYTGSTPSDFR 275 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 57/103 (55%) Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 SE+L++K + + + +LD E + S + F++++G +YL +R+ A Sbjct: 425 SESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKA 484 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 + LL++ L I +I G+ D NYFS +F + TG+TP ++R Sbjct: 485 KELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRE 527 >UniRef50_C2DI33 AraC family transcriptional regulator n=31 Tax=Enterococcus RepID=C2DI33_ENTFA Length = 307 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 19/279 (6%) Query: 15 SDQQAVA-VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 SDQ + V D + H HDF E+ +G L+ + + G + IH D Sbjct: 18 SDQYEIFHVKDMVSPEKTIYHYHDFYEVHCTLKGVATFFLDGHQFDVEAGTVLLIHYHDL 77 Query: 74 HSYA--SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 H S ++ I P+ L+ + + GQ ++ + +A+ + Sbjct: 78 HRIIKQSTDNFERMYIFLTPDFLQQRSSKRTNLSACFQHFGQRRSKVIKVDVAKLANYLT 137 Query: 132 QLEH-----ESSQHVPFANEMAELL--FGQLVMLLNRHRYTSDSLPPTSSET-LLDKLIT 183 L+H E V + ++ + L QLV+ + ++S P E ++ +IT Sbjct: 138 PLDHSPLPEEYGADVRYEQQLLDFLIYLNQLVL-----KEENESQPKQMIENERIEAMIT 192 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 ++ +L P L++ ++ + ++F++ TG T +Q++ + ++ +A+ LL+ R Sbjct: 193 YISQNLDQPLTLEQMEKNFFVTKYYVTREFKKHTGFTFHQFVLKKKLLYAKQLLKEYR-S 251 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQW--RHLNSQ 280 SD+ +CGF+ +F F +E MTP ++ +H N+Q Sbjct: 252 ASDVYLKCGFKSYPHFLKSFKKEFNMTPKEFLVKHKNNQ 290 >UniRef50_UPI0000DAF41A hypothetical protein PaerPA_01003251 n=1 Tax=Pseudomonas aeruginosa PACS2 RepID=UPI0000DAF41A Length = 306 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 53/84 (63%) Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P L++ +A + R L+++F TG++ +YL+QVRV A+ LL + L I +I+ E Sbjct: 215 PLGLERMAAQAGLALRTLKRRFGAATGLSPIRYLQQVRVDRAKKLLLATPLSIREIAYEV 274 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 G+E+ ++F +F +E G TPS WR Sbjct: 275 GYENVSFFVRLFRKEAGDTPSHWR 298 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 13/138 (9%) Query: 152 FGQLVMLLNRHRYTSDSLP-------------PTSSETLLDKLITRLAASLKSPFALDKF 198 FGQ+ LL+ + + S+P PT+ +DK+I+ + ++ LD+ Sbjct: 164 FGQITGLLDLLQALAVSVPRRMLASPCYYEKFPTAGNKRIDKIISFINSNYTRSLKLDEI 223 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + A+ + + F+ TG T QY+ +R+ +A LL + IS I+ ECGF+ + Sbjct: 224 AEMANMNSSAFCRFFKDATGKTFLQYVADMRIGYACKLLTIGDMEISQIAVECGFDSIPH 283 Query: 259 FSVVFTRETGMTPSQWRH 276 F+ F + TG+TP+Q+R+ Sbjct: 284 FNRTFKQLTGLTPTQYRN 301 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 35/251 (13%) Query: 38 FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLN 97 F + V G G + Y + +G F I D +Y S + Sbjct: 40 FYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDE----------------H 83 Query: 98 LDWQGAIPGFNASAGQPHWRLGSMGMAQ-------------ARQVIGQLEHESSQHVPFA 144 W+ GF+ H L S+G+ Q + V L H +S H Sbjct: 84 HPWRYVWFGFSGRCA--HDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHY 141 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 M +L+ L ++ N + D L S ++ I+ + P +++ D Sbjct: 142 RLMG-MLYLALSVIANAQK---DKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGI 197 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 + F+Q TGM+ +YL+ R+ AQ++L S L + I+ CG++ + F +F Sbjct: 198 NRSYFSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFR 257 Query: 265 RETGMTPSQWR 275 + TG++P+ +R Sbjct: 258 KTTGLSPNAYR 268 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 19/248 (7%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H E + V +G +ND Y + GDL +I+ADD H+ + +D N++ C + Sbjct: 28 HRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASD---DNLVLCLQH 84 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L PG + + RL + A Q + + N +A+L Sbjct: 85 RFEELVNVSVAPGTSNPVLKA--RLNDLRTTLAHLWWEQKYQPAHWQLATENGLAQL--- 139 Query: 154 QLVMLLNRHRYTSDSLPPTSSETLLD-----KLITR-LAASLKSPFALDKFCDEASCSER 207 QL++L RY S S P +E+ D + ITR L A + P +L + SE Sbjct: 140 QLILL----RYFS-SASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLSET 194 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L F+ +TG T+ ++L Q+R+ L + +++++ E GF F+ F RE Sbjct: 195 YLSHYFKDKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKREY 254 Query: 268 GMTPSQWR 275 TPS++R Sbjct: 255 QCTPSEFR 262 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 40/280 (14%) Query: 19 AVAVAD--RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH-- 74 AV +D +Y A H H E++ +++G + ++ + + +G+ +I++++ H Sbjct: 26 AVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFINSEEMHFM 85 Query: 75 -----SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 + V ++ C E+ +D + IP N L ++ Sbjct: 86 RMDAREECRIISFVFDKVLICGEKGS-KIDQKYIIPLINCK------ELSAL-------- 130 Query: 130 IGQLEHESSQ-----HVPFANEMA--ELLFGQLV--MLLNRHRYTSDSLPPTSSETLLDK 180 +L E SQ + +A+E+ E++ ++ +LLN R + L ++ D+ Sbjct: 131 --ELTEEDSQKLIQGYFSYADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGSNNTDR 188 Query: 181 -----LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 ++T + + +L EA ER + F + G + +YL++ R+ A Sbjct: 189 ERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTAAE 248 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LL+ S L +++I + GF +YFS VF R GMTP ++R Sbjct: 249 LLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYR 288 >UniRef50_A8U727 YfiF n=1 Tax=Carnobacterium sp. AT7 RepID=A8U727_9LACT Length = 302 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 17/258 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH-SYASVNDLVLQN--IIYC 90 H+H EL + G +++N++ Y + GD+ ++ D H ++ + N + + I + Sbjct: 33 HSHQQYELYFFYGGECKYLINNQIYDLQPGDMLFLDGLDLHKAHVTGNKELYERSMIHFS 92 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV---IGQLEHESSQHVPFANEM 147 PE + L A+ F+ + H + + + ++ I QL SQ NE Sbjct: 93 PEWILPVLQELDALFLFDTFSQLHHGLFHTSNVKETLEIERLINQLS-LLSQATEVDNEA 151 Query: 148 -----AELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRLAASLKSPFALDKFC 199 A++L QL+ ++ T+ + +E ++K+ + L K ++ Sbjct: 152 KAEAKAKILLIQLLFKVHELEKTTMLVLDKGNEGKYLYVEKIASYLQKYFKEVIYIEDIS 211 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS--RLLISDISTECGFEDSN 257 + S + F++ TG T+ QYL R+ A+YL++ + I +IS ECGFE Sbjct: 212 KALNLSPSYISHTFKESTGYTVMQYLMDYRLIQAKYLIEVAGENKTIKEISRECGFESDA 271 Query: 258 YFSVVFTRETGMTPSQWR 275 +F+ F ++ G+TP+++R Sbjct: 272 HFNRFFKKKIGVTPNEYR 289 >UniRef50_A7M0D3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M0D3_BACOV Length = 1353 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 1/102 (0%) Query: 175 ETLLDKLITRLAASLKSP-FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 E ++K + + ++++P F+++ CD+ S L ++F TG+T N ++R VR+ A Sbjct: 1244 EEFVEKALRLVEENMENPEFSVNNLCDDLGMSRSQLYRKFESITGLTPNDFIRSVRLKRA 1303 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LL+ S IS+IS GF YF+ F E G TP+Q+R Sbjct: 1304 AQLLRGSSYNISEISDRVGFNSIKYFNKYFKEEFGFTPTQYR 1345 >UniRef50_UPI0001C36A4E response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36A4E Length = 295 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 43/64 (67%) Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+ TG IN Y+RQ+R+ AQ LL +S + I+ I+ GF + NYF +F +ETG+TP+ Sbjct: 226 FKSITGFYINDYIRQIRIVKAQELLMNSDMTITTIAEATGFSNPNYFYSIFKKETGLTPA 285 Query: 273 QWRH 276 +R+ Sbjct: 286 AYRN 289 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 33/264 (12%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS------------V 79 A+H HD EL + G ++ + DR YR+ GDL ++ + H + Sbjct: 31 ADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVLYI 90 Query: 80 NDLVLQNIIYCPE---RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHE 136 N + ++ PE LK W P RL S +++G + +E Sbjct: 91 NPELFADLAVPPELAEGLKEPFGWD-----------VPILRLPSPASEAVERMVGDMVNE 139 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRY-----TSDSLPPTSSETLLDKLITRLAASLKS 191 ++ + +L++ R R+ ++D+ P +T ++ L + + Sbjct: 140 MIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKT--QAVVRYLNDNYRQ 197 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 L + + S L + F+Q TG T + YL +RV AQ LL+ S I+DI+ Sbjct: 198 ALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRS 257 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 GF + ++F +F R ++P +R Sbjct: 258 GFSNFSHFGKMFKRTVQLSPRAYR 281 >UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSQ7_PAESJ Length = 285 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 15/235 (6%) Query: 41 LVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDW 100 L W G G+ L + + G + D +Y +N Y E L++ Sbjct: 59 LFATWEGKGVITLGSEQHELVAGTYIIVPPDTPTAYRCLNG---NWKFYFLEFDSLDMAL 115 Query: 101 QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLN 160 G N G P + + MA+A ++ +L + + L +L++L Sbjct: 116 -----GLNLPVGIP---VSTAKMAEAARMNERLINNLIMKPAGYAYDSHLAMQELLLLFA 167 Query: 161 RHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMT 220 R R+ + S LD ++ R+ ++ F ++K+ ++ S +FR++TGM+ Sbjct: 168 RERHANRS----GRHPELDDILYRMHQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMS 223 Query: 221 INQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 NQY++++++ A+ L+ ++ + +I+ F D +FS +F + GM+P +R Sbjct: 224 PNQYMQELKLAAAKTSLETTQASVKEIAAALQFYDEFHFSKLFKKRYGMSPRAYR 278 >UniRef50_D1NB59 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB59_9BACT Length = 274 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 61/103 (59%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L + I +A + P + + ++A S FR+Q M+ + YLR++R+ HA++LL Sbjct: 162 LARAIRYMAFHFRQPLLIREVSEQAGLSHTYFNTLFREQLHMSPSDYLRKLRLGHARHLL 221 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 ++SR+ I+++ + G+E+S+YF +F +E TP +R N + Sbjct: 222 RNSRMSIAEVGIQSGYENSHYFCRIFQQEHHCTPGTYRAENRK 264 >UniRef50_B2JUY8 Transcriptional regulator, AraC family n=8 Tax=Burkholderia RepID=B2JUY8_BURP8 Length = 319 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 56/102 (54%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 ++++I + A L P L + A + QFR+ TG+ ++YL + RV HAQ+LL Sbjct: 215 MNRVIEFVDAHLAEPIGLAEIASSAGLTRMHFAAQFRRATGLRPHEYLLRRRVEHAQHLL 274 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 S+ + D++ CGF +F+ VF + G TP +W+ + + Sbjct: 275 VTSKHNVMDVALSCGFRSQAHFTTVFKKFVGETPHRWKEMTN 316 >UniRef50_C9ABS1 Helix-turn-helix domain-containing protein n=3 Tax=Enterococcus casseliflavus RepID=C9ABS1_ENTCA Length = 264 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 20/260 (7%) Query: 18 QAVAVADRYPQDV-FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 + + V+ +P + + EH H EL+ G + + + PY +T G + + H+ Sbjct: 11 EYLGVSSYHPYSLNYMEHFHRSFELLFCSDGEAVVKIEESPYVLTTGQVLLVMPYQTHAI 70 Query: 77 ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHE 136 + + L +++ PE IP F A + L + V QL Sbjct: 71 ETPTESQLHILVFSPEY----------IPDFYAKTKD--FALSDPVITIDSSVAKQL--- 115 Query: 137 SSQHVP-FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFAL 195 + P F + L L +L + + LP + E +L +L+ + + K L Sbjct: 116 ---YYPLFETDSLYLRKSALYQVLYLFEHQTTLLPAKNQEDILIQLLVYIESHFKEELTL 172 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 +K S + + + T + L Q R+ HA +LL HS L I++++ + GF++ Sbjct: 173 EKLSSSIGYSSVYVSRMITDKLKSTFPRLLNQARIRHASFLLTHSLLPITEVAEQAGFQN 232 Query: 256 SNYFSVVFTRETGMTPSQWR 275 F+ F T +TP ++R Sbjct: 233 VRTFNRNFKALTSLTPKEYR 252 >UniRef50_D1CHN4 Transcriptional regulator, AraC family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CHN4_THET1 Length = 296 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 49/270 (18%) Query: 34 HTHDFCELVIVWRGNGLH--VLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 H HDF E+ +++ G G+H + D P ++RGD F + H++ L + N P Sbjct: 34 HAHDFLEIAVIFGGGGVHRTIRGDLP--VSRGDAFILWPQSWHAFLDCRGLEVYNCCVGP 91 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQ--HVPFANEMAE 149 E L+ L W P A + G H ++ HV + AE Sbjct: 92 ELLRRELAWLREDP-------------------VAGCIFGDDSHAEAEIVHVKLTEDDAE 132 Query: 150 LLFGQLVMLLN-----------------------RHRYTSDSLPPTSSE-TLLDKLITRL 185 + G LL R+ ++++ + + +++ L Sbjct: 133 IARGHFEALLGLSEDSAFHRVERLGHLLLLLGLLARRFVAEAIAGRPKQHPAVSRVVQLL 192 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 A + L + E + L + + Q G+ YL ++R+ A +LL + L I+ Sbjct: 193 RAEADRDWTLRELAGEVALEPSYLVRLCKAQLGLPPMAYLARLRLERAAHLLLRTDLSIT 252 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I+ E G+ D NYF F G+ P+ +R Sbjct: 253 QIAAEVGWPDPNYFCRRFRAYFGLPPTLYR 282 >UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=Gammaproteobacteria RepID=C6C8M9_DICDC Length = 322 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 56/102 (54%) Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + +L ++ R+ A L + EA SE + FRQ GM +QY+ + R+ A Sbjct: 216 APAVLRRVQARIDAGLAEGLTIGDLAAEAGLSEFHFARMFRQSVGMAPHQYVMKRRLAQA 275 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + LL+ SRL I+D++ CGF +++FS F E G+TPS R Sbjct: 276 KDLLRQSRLSITDVALACGFSSASHFSQRFRAEFGVTPSTLR 317 >UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZD9_PEDHD Length = 294 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 57/104 (54%) Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 SE L++K L S+ + A++K +E S R+ F+ TG+ +QYL Q+++ A Sbjct: 187 SEILINKARILLRESVHTNIAIEKLAEELHVSYSWFRKAFKTFTGIAPHQYLLQLKIEKA 246 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + LL S I +I+ E GFE S YFS +F +T P +R L Sbjct: 247 KTLLSDSTKPIKEIAFELGFESSFYFSRIFKNKTSYAPDTYRKL 290 >UniRef50_D2PMT4 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PMT4_9ACTO Length = 314 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 16/275 (5%) Query: 20 VAVADRY-PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 +A A RY +D A HTH F E+ +V G+G+H+ R+T GD+ + H Y Sbjct: 20 LAYAGRYLHEDSHAVHTHSFFEVAVVIGGDGVHLSLAGRQRLTTGDVVLLRPGVWHGYED 79 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH--- 135 +DL L N + + ++ L W P + GM G L Sbjct: 80 CHDLRLYNCCFSADLMQRELAWTREDPLLGYLLWTGPFSAQRRGMLTTHLDAGTLAELLD 139 Query: 136 -----ESSQHVPFANEMAELLFGQLVMLLN-RHRYTSDSLPPT----SSETLLDKLITRL 185 E + P + +++ G+L ++L+ R +D+ + +LD + R+ Sbjct: 140 HLDGLEQLRDHPVSLHRGDIV-GRLSLVLSCLARAVADAGDSRGDGHTHPAVLDAM-RRM 197 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 A + L + DE + L + F+ TG+ YL + RV A + L H+ IS Sbjct: 198 EARPAYQWTLTELADELHLAPGYLVRLFKSATGLPPMAYLSRHRVELAAHRLLHTDEPIS 257 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 I G+ D NYF+ F G++ S +R L S Sbjct: 258 RIGEAVGWPDQNYFARRFKSHFGLSASNYRALFSH 292 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 13/242 (5%) Query: 37 DFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKL 96 DF L IV RG ++L + R+ G++ +I A + + ++L ++++ P L L Sbjct: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 Query: 97 NLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLV 156 + + A Q +L S+ + ++ L H S P + + L L+ Sbjct: 107 SF-YDSRTTSLLHPARQ--IQLPSLQRGEGEAMLTALTHLSRS--PLEQNIIQPLVLSLL 161 Query: 157 MLLNRHRYTSDSLPPTSSETLLDKLITRLAASLK----SPFALDKFCDEASCSERVLRQQ 212 L + ++PP +S+ D L + ++ P + + + L + Sbjct: 162 HLCR----SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F Q M +Y+R VR+ A+ +LQ L I +++ CGF DS+YF VF R+ G+TP Sbjct: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 Query: 273 QW 274 ++ Sbjct: 278 EY 279 >UniRef50_D1N3N0 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3N0_9BACT Length = 336 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 27/262 (10%) Query: 34 HTH-DFCELVIVWRGN-----GLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 H H DF ELV+V++G+ G L +T G++F + H Y ++++ NI Sbjct: 58 HRHCDFYELVLVYKGSARNDSGTGTLET----VTVGNVFLLPPGSIHRYQAIHEFAHFNI 113 Query: 88 IYCPERL-KLNLDWQGAIPGF-----------NASAGQPHWRLGSMGMAQARQVIGQLEH 135 ++ PE L ++ D + +PGF N +A P L + ++ Sbjct: 114 LFRPELLNQIRFDLE-TLPGFQALFRNFGAAGNPTAISPFLFLPEAEITDVMMLLENCRR 172 Query: 136 ESSQHVP-FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFA 194 E + P F + L + + R S + +++ +L + F+ Sbjct: 173 ELERQEPGFQSAAVASFLHALTGICRKARLQGGRGEENSFR--ISRVVEQLNSRYSEEFS 230 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 + + A S R +F + G++ +YL ++R+ A L I+ I+ GFE Sbjct: 231 VPRMAKLAGMSVSNFRHRFSEVMGVSPVEYLTRLRLKMAAPLFMMPEN-ITSIAFRVGFE 289 Query: 255 DSNYFSVVFTRETGMTPSQWRH 276 DSNYF+ F + G+TP+++R+ Sbjct: 290 DSNYFARQFRKYAGLTPTEFRN 311 >UniRef50_A3HVZ7 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVZ7_9SPHI Length = 288 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 12/257 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H C+L ++ G G ++ D R GDLF + + H + S + + Sbjct: 32 HQHPQCQLTVIIEGRGQLLVGDYVGRFEPGDLFLLGENIPHVFRSDAEYFDEENKLSSSG 91 Query: 94 LKLNLDWQ------GAIPGFNASAGQPHWRLGSMGM-AQARQVIGQLEHESSQHVPFANE 146 L D++ G + F G + A++ I +L S Sbjct: 92 NTLFFDFKAIEKSLGEVDEFRELIHLNEQINGCFKIEGTAKKSILELFQNFSSCSGLEKL 151 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTSSET-----LLDKLITRLAASLKSPFALDKFCDE 201 + L+ + ++ + +P T S + +D+++ + + P +LD+ ++ Sbjct: 152 QKAIHMLSLIKVGSKEIIALNLIPVTRSLSERDGKRMDQVMRYILENSAKPISLDEIAEQ 211 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A S+ + F+ +T T QYL+Q+R+ A+ LL + L IS IS + GF+ ++F+ Sbjct: 212 AYMSKEAFCRFFKLRTRRTFTQYLQQLRITEAKKLLLETDLGISQISYQVGFQTLSHFNK 271 Query: 262 VFTRETGMTPSQWRHLN 278 F T TP WR LN Sbjct: 272 TFKSMTNQTPKSWRKLN 288 >UniRef50_B1L1U7 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=B1L1U7_CLOBM Length = 329 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 58/94 (61%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 ++ +L+ P +L K D+ + S L++ F+ TG T+ +Y+++ ++ A+YLL+++ + I Sbjct: 233 ISKNLREPPSLKKLADDLNISLYKLQKAFKNSTGNTVYEYIKKSKIEKAKYLLKNTNMSI 292 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 +I+ E G+E+ + FS F M P ++R LN Sbjct: 293 LEIANEIGYENPSKFSNAFKGYNNMNPLKYRKLN 326 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 21/261 (8%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 ++ H H++ E+ + G H++ D Y + G+L H ND+ + I+ Sbjct: 38 NMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIV 97 Query: 89 YCPERLKLN-------LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHV 141 E ++ LD + +A+ Q R+ ++I Q E+ S + Sbjct: 98 LYFESSEVASKELLDALDENNGMYRPDAATRQKLHRM-------LEELIRQYENPSDFYK 150 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 + + + ML++ R + + T T ++++ + + + L++ + Sbjct: 151 SYRRTLLNMFL--FTMLMHTRRREPEQMEETGRTT---QIVSYIHSHYQEDITLEQLAQK 205 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 S+ L ++F++ T T+ QY+ RV +AQ L + I++IS E GF + +F+ Sbjct: 206 FYVSQFYLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNR 265 Query: 262 VFTRETGMTPSQWR--HLNSQ 280 VF TG TPS +R H N Q Sbjct: 266 VFKSVTGTTPSGYRKHHQNMQ 286 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 19/247 (7%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDL-----FYIHADDKHSYASVNDLVLQNII 88 H H++ EL + G H+ +D Y + G+ + +H HSY + ++ Sbjct: 23 HYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMH----HSYGDSGVSFKRLVL 78 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 Y + + A+PG Q W S + ++ L E + ++ E Sbjct: 79 YFTKEMI-------AVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEA- 130 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 L F +L+ R ++++ P ++ + +I L + P L++ ++ S Sbjct: 131 -LYFILNQILILLLRNSTETAKP-EKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYY 188 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L ++F++ T TI QY+ +RV HAQ L + +++IS GF + +F+ V+ TG Sbjct: 189 LCREFKKYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTG 248 Query: 269 MTPSQWR 275 ++PS+ R Sbjct: 249 LSPSKSR 255 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 154 QLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 QL++LL + D +P S++ + L + L +D+ E +++ L + Sbjct: 163 QLLILLMEDAWNPDKIPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKI 222 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 FR+ G+TI YL Q R+ A++LL+ + L + +I+ + G D+NYFS F + G+ PS Sbjct: 223 FRETYGITIVNYLNQKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPS 282 Query: 273 QWRHL 277 ++R + Sbjct: 283 EFRKM 287 >UniRef50_A8KXI5 Transcriptional regulator, AraC family n=73 Tax=Bacteria RepID=A8KXI5_FRASN Length = 342 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%) Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 VP A E + F D PP S +L+ L+ + A+ P +D Sbjct: 210 VPLAREGGQAQF-----------IVRDRPPPDGS--VLEPLLRWMEANCHRPLTVDDLAA 256 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 +A S R L ++FR+QTG T +Q+L +VR+ AQYLL+ + + I+ + GF F Sbjct: 257 QAMTSPRTLNRRFREQTGTTPSQWLHRVRLRQAQYLLETTGHSVERIAAQVGFGSPTAFR 316 Query: 261 VVFTRETGMTPSQWRH 276 F R G +P +R Sbjct: 317 DGFRRLVGTSPQAYRR 332 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 36/256 (14%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL+ V G G N + RGDL I +H+ ER Sbjct: 37 HTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHT----------------ER 80 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 N + + G + + S + QV EH+ S H F + E+ Sbjct: 81 SSQNHPLEYYVLGIDGIS------FLSQKDRECAQVFCNFEHDPSIHELFRQMLYEIRTA 134 Query: 154 QL-VMLLNRHRYT--------SDSLPPTSSETL-LDKLITRLAASLKSPFA----LDKFC 199 Q + +H S L P S ++ + K ++ L S +A LD Sbjct: 135 QYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLT 194 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 ++ + F + G++ QYL Q R+ AQ+LL+++ ISDI++ GF +YF Sbjct: 195 GLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYF 254 Query: 260 SVVFTRETGMTPSQWR 275 + +F + MTP ++R Sbjct: 255 TQIFRKNFNMTPVKYR 270 >UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=Enterobacteriaceae RepID=A4WEG5_ENT38 Length = 279 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 106/264 (40%), Gaps = 18/264 (6%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 V+ + + V H H E++ V G G+ ++++R Y + G LF+ H Sbjct: 20 VSFSRLFANTVRYHHWHQCLEILYVEEGFGVAIVDNRHYTMRPGRLFFFPPFTLHKV--- 76 Query: 80 NDLVLQNIIYCPERLKLNLDWQGAI------PGFNASAGQPHWRLGSMGMAQARQVIGQL 133 +V + R ++LD + P + R G +A + Sbjct: 77 --MVDEQAEAIYRRTIIHLDHHAVLKVLRDFPQTQQRLQKLSRRGGEAWVADMADCHPHI 134 Query: 134 EHE-SSQHVPFANE-MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKS 191 H S H P +E +A L+ ML + P SS + +++ L + Sbjct: 135 HHLFSGYHPPLTSESVASLIISLFAMLPD-----DKDGAPGSSHGIASQVMFWLDEHYQQ 189 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 F+LD E S + ++F +TG I+ YL +R+ A L HS + DI+T Sbjct: 190 KFSLDALAGELGKSRSYVSRKFHAETGEKIHDYLNTLRLRKACECLLHSNESVRDIATRV 249 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 GF D YF F + G TP Q+R Sbjct: 250 GFSDVTYFISAFKKGIGETPLQYR 273 >UniRef50_A6NS82 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS82_9BACE Length = 301 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 20/259 (7%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY----ASVNDLVLQN 86 F HDF E + V +G + DR R+T+G + + H+ S +LV+ + Sbjct: 31 FEGECHDFWEFLYVDKGELDVLAGDRTLRMTKGQFIFHAPGEFHALRATGTSAPNLVVVS 90 Query: 87 IIYC--PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 YC P+ + + G + + R+ G A + + + P A Sbjct: 91 F-YCDGPDMAR----FVGRVDTAGDAERTLMARIVEEGAAAFSTPLDDPATTAMERSPDA 145 Query: 145 NEMAELLFGQLV--MLLNRHRYTSDSLPPTSS-------ETLLDKLITRLAASLKSPFAL 195 AE L G + +L++ R + PP +S E L K+ L A+L L Sbjct: 146 PFGAEQLLGAAIEALLISLLRRDGAAAPPPASLIRTRGREELFGKVTDYLRANLGRSLTL 205 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 ++ C + L+Q FR+ TG +Y ++++ A+ +++ ++I+ G++ Sbjct: 206 EEVCRDNLVGRSRLQQLFREHTGGGAMEYFGKLKIERAKEMIREGSRNFTEIAAALGYQS 265 Query: 256 SNYFSVVFTRETGMTPSQW 274 YFS F + TGMTPS++ Sbjct: 266 IYYFSRHFKKVTGMTPSEY 284 >UniRef50_B6VMW0 Similar to arac-family transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=B6VMW0_PHOAA Length = 322 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 61/102 (59%) Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 S+TL+ KL + ++ ++ ++ ER ++++F+ TG T QY++Q+R+ A Sbjct: 215 SDTLIHKLQDWMHSAPSDILSVGDLANKIHLCERQMKRRFKTATGQTPIQYIQQIRLSLA 274 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +Y L+ S I +IS E G+ED+ YF +F + G+TP ++R Sbjct: 275 KYRLEKSNKTIEEISHEVGYEDTRYFRELFKKLNGVTPIEYR 316 >UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y024_CROTZ Length = 296 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 25/270 (9%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 V+ + Y + H H EL+ V G G+ +++++ Y + G LF H Sbjct: 26 VSFSRLYANSIRYHHWHQCLELLYVEEGYGVVMVDNQQYTMRPGRLFIFPPMTLHKV--- 82 Query: 80 NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI-------GQ 132 +V + R ++LD A+ A Q + RL ++ + AR + Sbjct: 83 --MVEERERERYRRTVIHLDNHAAL-RLLAPFAQRYARLEALSLRGARATVVDFADIHAH 139 Query: 133 LEHESSQHVPFA-------NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 L+H + + P E+A L L +L + + PP +S L +++ + Sbjct: 140 LDHLFTLYAPRLAKGRSEHEEVASFLIHLLSLLPE-----TPAPPPRASNALSTQVMFWV 194 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + F+L + + S L ++F+Q+TG I+ YL R+ A LL+H ++ Sbjct: 195 EENYAQKFSLGALALKLNRSRSYLSRRFQQETGEAIHDYLTTFRLRKACELLRHHAYSVA 254 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 DI+ GF D+ YF F + G TP Q+R Sbjct: 255 DIARMTGFSDTTYFISSFRKRLGETPLQYR 284 >UniRef50_B7V806 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7V806_PSEA8 Length = 297 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 7/145 (4%) Query: 144 ANEMAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLDKLITR----LAASLKSPFALD 196 A E EL Q+++ L H R+ S +P + + L + R +A L ++ Sbjct: 148 AGERNELFIEQVMLALLTHVQDRFASTQVPVCTGKGLAPWQLRRAKELIAGHLAEGVSVA 207 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + +E S + F+ TG++ +++L ++RV A+ L+ S +S I CGF D Sbjct: 208 RLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELMLGSDEPLSQIGVACGFSDQ 267 Query: 257 NYFSVVFTRETGMTPSQWRHLNSQK 281 +FS +F R G +PS WR + Q+ Sbjct: 268 PHFSRIFLRLAGASPSTWRRVKRQR 292 >UniRef50_B0A6F6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6F6_9CLOT Length = 401 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 59/102 (57%) Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 L+ K I + ++L++ ++ + ++ S L + F+++TG I +Y+ ++++ HA + Sbjct: 298 VLVGKAINYINSNLENNLSVSEIANQLYVSPTYLSRAFKKETGFLIIEYINKLKIKHATF 357 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LL+ + L I DI G D NYFS +F R TP+Q+R + Sbjct: 358 LLRDTALPIQDIGRIIGINDVNYFSRLFKRYMSQTPTQYRKI 399 >UniRef50_Q7NW89 Probable transcriptional regulator, AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NW89_CHRVO Length = 353 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET---LLDKLITRLAASLKSPFALDKFCD 200 +E+A+ L+ L R ++ +LP S+ T ++ K L + P++LD Sbjct: 187 GDELAQRCTNGLLYLPARFEQSAQTLPALSTPTRDSVVFKARRWLEQHVAEPYSLDLAAA 246 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 A+ S R L + FR+ MT YL ++RV A+ LL+ + L ++ I +CG++D + F Sbjct: 247 AAAVSSRTLLRHFREVADMTPLDYLHKLRVERAKLLLEVTTLDLAGIMEQCGYDDPSAFR 306 Query: 261 VVFTRETGMTPSQWR 275 +F R+TG+TP+ +R Sbjct: 307 RLFRRQTGLTPTAYR 321 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 53/91 (58%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L A+ ALD DE S+ + + F++ TG TI +Y+ +R+ A +L+ S L I Sbjct: 191 LEANYTKELALDTISDELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSI 250 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 SD++ E GFE ++YF +F + +TP ++R Sbjct: 251 SDVAAELGFESASYFERIFKKIMTVTPLKYR 281 >UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobacillus RepID=Q5QL43_GEOKA Length = 258 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 50/86 (58%) Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P L++ S+ + F+ TGMT +YL QVR+ ++YLL+ S L I I+ + Sbjct: 162 PLTLNEVASMVYLSQSHFSRLFKSATGMTFVEYLTQVRIQKSKYLLKMSSLPIDVIAHKT 221 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHL 277 GF +++YF+ F R G TP+++R L Sbjct: 222 GFSNASYFATTFKRLEGKTPTEYREL 247 >UniRef50_B5JP43 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP43_9BACT Length = 304 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 18/252 (7%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 F H LV+ + G ++ R + + GD F + H Y ++ + I + Sbjct: 54 FESRPHHRFVLVLCFETEGSINVDGRIFHLRPGDAFLVKPYQFHFYM---EIAREKIAW- 109 Query: 91 PERLKLNLDWQGAIPGFNASAGQP---HWRLGSMGMAQARQVIGQLEHESSQHVPF---A 144 L L + + A P F A P +L + + AR G ES+ V Sbjct: 110 ---LFLTFETRNATP-FETFANTPIPISEKLSAEAVEIAR---GYANRESADEVTLDMLT 162 Query: 145 NEMAELLFGQLVMLLNRHR-YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 ++ LL LNR R + PT+ L+D++ +L L+ + + D + Sbjct: 163 FSVSTLLNKLRAYSLNRSRELIASPKYPTTGYELVDRINAQLDQKLEENITILQIADALA 222 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 SE LR++F+ TG+++ YL ++ A LL HS ++ IS +CG++ FS F Sbjct: 223 LSESHLRKRFKSLTGLSLGSYLVHYKLNRAVKLLVHSDASLTQISLDCGYDSLAAFSRSF 282 Query: 264 TRETGMTPSQWR 275 + G++PS++R Sbjct: 283 KNQLGISPSRYR 294 >UniRef50_B4CZ42 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ42_9BACT Length = 267 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 6/112 (5%) Query: 170 PPTSSE------TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQ 223 PP + E +L + + R+ ++ E S R +++QF++ G+T + Sbjct: 152 PPDARERQFPAFNVLSQAVLRMRQGFGGRLTIETVASECGLSLRAMQRQFQRVFGLTPQE 211 Query: 224 YLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +L + RV A +LL+ + +SDI+T+CGF D + F+ +F R G+TP Q+R Sbjct: 212 FLIKTRVAAACHLLRTTARALSDIATDCGFADQSSFTQLFRRHAGVTPGQYR 263 >UniRef50_A7IDZ1 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IDZ1_XANP2 Length = 295 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 4/109 (3%) Query: 167 DSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLR 226 D P + + + ++ R+A L LD EA S R L + F ++ GM+++QY+ Sbjct: 187 DGAPERALRRVCELIVDRIAEELP----LDALAREAGVSPRSLSRAFNRRFGMSVHQYIV 242 Query: 227 QVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 RV A+ LL + L I +++ E GF ++ S VF ++TG+TPS +R Sbjct: 243 SRRVLKAKDLLASTDLPIVEVALEAGFSSQSHLSAVFRKQTGVTPSLFR 291 >UniRef50_Q8AB44 Sensor protein n=5 Tax=Bacteria RepID=Q8AB44_BACTN Length = 1370 Score = 67.0 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 67/111 (60%), Gaps = 2/111 (1%) Query: 167 DSLPPTS-SETLLDKLITRLAASL-KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQY 224 DSL P+S + LDK+I+ + +++ + F + + D + S+ L ++ + TG++ ++ Sbjct: 1257 DSLEPSSIDKEFLDKVISVINSNMSEGDFDVVQLADALAVSKSSLYRKMKLATGLSPIEF 1316 Query: 225 LRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +R +R+ H LL+ + +++++ ECGF + YF+ F E G+TP +++ Sbjct: 1317 IRNIRLKHGSQLLKDKSISVAEVAYECGFSNPKYFATCFKEEFGVTPKEYQ 1367 >UniRef50_C2H3H7 Response regulator n=23 Tax=Enterococcus faecalis RepID=C2H3H7_ENTFA Length = 493 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 53/95 (55%) Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + R+ L DE + L Q F+++T + +QYL QVR HAQ LL ++ Sbjct: 388 VERIEQGYLEELNLKTVADELHLNPSYLGQIFKKETKRSFSQYLNQVRTKHAQKLLLYTD 447 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I++IS + GF ++NYFS +F + G+TP ++R Sbjct: 448 DTINEISEKVGFNNTNYFSKMFKKLNGITPKEFRE 482 >UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD7_9FIRM Length = 286 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 54/99 (54%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 ++ K+ + ++ P L S L ++ TG I Y+++ RV A +L Sbjct: 178 VIKKVENYINQNISGPLPLKDIAQHVFMSSAYLSTTYKNVTGRNITDYIQERRVSAACFL 237 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++ + ISDI+ E GF D+NYF+ VF ++TGMTP ++R Sbjct: 238 IRTTSGSISDIAQETGFSDANYFTKVFKKKTGMTPREYR 276 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 32/244 (13%) Query: 44 VWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGA 103 + G G + +N + +T GD F ++ + +++ Q P W+ Sbjct: 48 IISGKGRYTVNGSVHTLTPGDAFLVYPN--------TEVIYQADAQDP--------WEYT 91 Query: 104 IPGFNASAGQPHWRLGSM--------GMAQARQVIGQLEH-ESSQHVPFAN--EMAELLF 152 GF S R ++ ++ QL H ++ F N EM L+ Sbjct: 92 WVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDARGTEFENALEMTGRLY 151 Query: 153 GQLVMLLNRHRYTSDSLPP-TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L + ++ + S PP S+ + + K I ++A+ P ++ S L + Sbjct: 152 TTLALFVS----AATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFR 207 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F+ G++ +YL R+ A YLL+HS L I+ I+ GF++S YFS F + G++P Sbjct: 208 SFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSP 267 Query: 272 SQWR 275 ++R Sbjct: 268 KEYR 271 >UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH4_9BACI Length = 515 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 12/172 (6%) Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEM-AELLF--------GQLVMLLNRHRYTSD 167 R S G+ + +GQ + S H P E AELL G L+ + R + + Sbjct: 346 RRMSRGLRSRLKSLGQ---KDSFHFPSVFEQGAELLIAESYAVFGGWLLQDIERAIHVFN 402 Query: 168 SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 + + L+++ + + KS + D + + F+Q+TG + N+Y+ Sbjct: 403 LKAADNKDWLIERALEYIRTYYKSEIKAQEVADVVNITPNYFSSLFKQKTGKSFNEYVNH 462 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +RV A+ LL+ + I++I+ + GF + YF VF + +GMTP+Q+R L S Sbjct: 463 MRVEEAKTLLEETPFKINEIAEQAGFHEYKYFVEVFRKFSGMTPTQYRKLRS 514 >UniRef50_C4FX77 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX77_9FIRM Length = 387 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 27/253 (10%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 F+ HD+ E+ IV +G +H ++ + R D + +HS D V + Sbjct: 147 FSNDQHDYFEMTIVDQGELVHEVDGVKHTAKRHDCMLYYPKQRHSQMVKRDGVSTYLSIM 206 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA-QARQVIGQLEHESSQH--VPF-ANE 146 F AS P + + ++ QVI ++ E S H PF A+E Sbjct: 207 ----------------FQASGISPELKNKIVHLSNHYTQVIEKMV-ELSNHPGAPFYADE 249 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTS-----SETLLDKLITRLAASLKSPFALDKFCDE 201 M L ++ +L + D P TS L ++ L +++ ++ + Sbjct: 250 MITLFKSVIIQMLKSDQAFYDE-PSTSMRENYENELFQSIVDYLHHHVEAENQVNDLVNH 308 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + S L+ F++ MT Y+ Q+R+ ++ L++ S+L +S+I+ G+ YFS Sbjct: 309 FNLSRSTLQLLFKKYANMTPKNYINQLRLKRSKLLIKESKLTLSEIAETLGYGSLQYFSR 368 Query: 262 VFTRETGMTPSQW 274 VFT+E GM+PS + Sbjct: 369 VFTQEYGMSPSHY 381 >UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPB8_9CLOT Length = 335 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 57/264 (21%), Positives = 115/264 (43%), Gaps = 18/264 (6%) Query: 23 ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL 82 A+ YPQ HDF E+++V + +LN+ ++ G+L I D H+ D Sbjct: 75 ANEYPQ------VHDFYEIILVTENSLDILLNNDRIKLGHGNLLLIRPGDIHTKIQTGDS 128 Query: 83 VLQNIIYCPERLKLNLDW----QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 V N+ + + + Q A + P RL ++ + + L SS Sbjct: 129 VHINLAFPAYTVNSLFGYLYNSQAPRKELFAGSHSPIVRLSTIDTLMIQNRLSFLNQLSS 188 Query: 139 QHVPFANE-----MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 + N + ++++ ++ L + + +SD+ ++ L + L+ Sbjct: 189 SDMEEKNTHLRAILIDIMYSYIIPELEKQKRSSDA---SNLPAWLVPALEGLSNPKNLTM 245 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +D + S + + FR+ G+T + Y+ R+ +A LL H+ + I D+ E GF Sbjct: 246 GMDYLVRQTQRSPEHICRMFRKHLGITPSAYINGKRLNYAANLLIHTDMEIVDVIYESGF 305 Query: 254 EDSNYFSVVFTRETGMTPSQWRHL 277 + NYF +F +E G++P +++ + Sbjct: 306 QSINYFYHLFKKEYGISPVKYKKI 329 >UniRef50_D0PR01 Sensor protein n=1 Tax=Flammeovirga yaeyamensis RepID=D0PR01_9SPHI Length = 1385 Score = 67.0 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 13/140 (9%) Query: 148 AELLFGQLVMLL-------NRHRYTSDSLPPTSSETLLD-KLITRLAASLK-----SPFA 194 +E+L +++ L+ NR R D P + T LD K + RL ++ S F Sbjct: 1233 SEVLLARILTLIENRKNQQNRFRVDIDIQPSEITFTSLDEKFLNRLVKIVEDNISDSEFT 1292 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 ++K E + L Q+ + TG T ++R +R+ A LL+ R +SD++ E GF Sbjct: 1293 VEKLAMEYGVTTLRLNQKLKALTGQTAKGFIRNIRLKRAAQLLKLGRFNVSDVTYEVGFN 1352 Query: 255 DSNYFSVVFTRETGMTPSQW 274 D YF F +E G+ PSQ+ Sbjct: 1353 DLKYFRNCFKKEFGLLPSQY 1372 >UniRef50_UPI0001C359BB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C359BB Length = 108 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 55/101 (54%) Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 K++ + A P LD+ + + + F+++TG IN YL + R+ A+ LL+ Sbjct: 7 KIMQYMEARYAEPVTLDELANHVHMNRSYISHLFKKETGRNINAYLLEFRMEKAKILLES 66 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 S I DI + G DS YFS VF + TG TP ++R ++++ Sbjct: 67 SNHNIQDICCQIGIPDSAYFSKVFKKYTGFTPIEFRRISNE 107 >UniRef50_C0X774 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=22 Tax=Enterococcus faecalis RepID=C0X774_ENTFA Length = 197 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 50/91 (54%) Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P +LD S L++ F++QT T YL VR+ AQ LL HS L I I+ + Sbjct: 107 PLSLDYLAQACHGSPFHLQRTFKEQTKQTPLAYLTSVRIRQAQELLLHSPLTIQQIAKKV 166 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 GF+ + YF+ F +ETG+TPS +R N K Sbjct: 167 GFQTAAYFATTFKKETGVTPSVYRSKNEPKK 197 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 11/242 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII--YCP 91 H H+F E+ + +G H++ D Y + + H ND+ + ++ + P Sbjct: 31 HYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRRLLLYFNP 90 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 E ++ + S ++L A ++ + E + ++ E+ L+ Sbjct: 91 EVIRSPQILR------TLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELITLM 144 Query: 152 FGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L + L R+ SD + +I L L++ + S+ L + Sbjct: 145 VNALALQLVRN---SDEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCR 201 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 +F++ T TI QY+ +RV HAQ LLQ S I++IS GF + +F+ V+ TGM+P Sbjct: 202 EFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSP 261 Query: 272 SQ 273 SQ Sbjct: 262 SQ 263 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/263 (20%), Positives = 116/263 (44%), Gaps = 30/263 (11%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIY---- 89 HTHD+ E+ IV G ++++D+ Y + +G++ I+ +H + + ++ Y Sbjct: 32 HTHDYTEVKIVLSGYFKYIIDDKLYEVAKGNIIIINPGVQHEKIIPSGVKVEEFNYGLTN 91 Query: 90 -----CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 PE L ++P F QP + + I + +E ++ P+ Sbjct: 92 IHFKELPENF---LIEPSSLPVFTLPLYQP----------EIIKCINETINEQEKNEPYC 138 Query: 145 NEMAELLFGQLVMLL------NRHRYTSDSLPPTSSE--TLLDKLITRLAASLKSPFALD 196 + + +L LL N+ R L +SE +++ ++ L+ + +L Sbjct: 139 DLFIKSSIMKLTALLHRGMTANKERTEKTRLDIQTSEKTNIVNDILEYLSTNYMEQISLY 198 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + S + + F+++TG + +L ++R+ A+ LL + I ++ G+ED+ Sbjct: 199 RIAHNMYLSPVYISKIFKEETGESPINHLIRIRLTKARELLMSGNMPIKTVARSVGYEDA 258 Query: 257 NYFSVVFTRETGMTPSQWRHLNS 279 YFS ++ + G+ PS + N+ Sbjct: 259 FYFSKLYKKYYGIPPSMEKRSNA 281 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 17/251 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H EL + G G ++N +GD+ +I+++D H +LV+ I++ P Sbjct: 57 HWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPSL 116 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ------ARQVIGQLEHESSQHVPFANEM 147 L ++L F+ P LG++ AR + +E ++ + + + Sbjct: 117 LSIDLK-------FDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLI 169 Query: 148 AELLFGQLVMLLNRHRYT-SDSLPPTSSETL--LDKLITRLAASLKSPFALDKFCDEASC 204 L + + L NRH + + P + L +++ + L + L + D Sbjct: 170 RSDLI-RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHL 228 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S F+Q G + + YL Q+R+ HA +LL+ + I +I+ CGF + + F+ +F Sbjct: 229 SPSRFSALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFK 288 Query: 265 RETGMTPSQWR 275 + G +PS+ R Sbjct: 289 QHVGASPSEIR 299 >UniRef50_C5D0H4 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5D0H4_VARPS Length = 305 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 52/95 (54%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L A L +L E + S + F+Q TG T + +L RV A+ LL L I Sbjct: 210 LMAHLAGDVSLGDAARECALSRSHFSKAFKQTTGQTPHAWLVAQRVQAARRLLGQPHLPI 269 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 ++I+T CGF D ++ + VFT TG +P++WR LN+ Sbjct: 270 AEIATACGFSDQSHLTRVFTAHTGTSPARWRRLNA 304 >UniRef50_A5ZM23 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM23_9FIRM Length = 518 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 45/66 (68%) Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+ +TG T+NQY+ + R+ A+ LL+ +R I+DIS+ G+ D NYF F + +G++PS Sbjct: 451 FKSETGQTLNQYITEYRMEKAKQLLKDARFKITDISSRVGYSDGNYFGKSFKKYSGLSPS 510 Query: 273 QWRHLN 278 ++R N Sbjct: 511 EYREQN 516 >UniRef50_C1RHJ1 DNA-binding domain-containing protein, AraC-type n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHJ1_9CELL Length = 336 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 43/273 (15%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIYC 90 H HDF + V RG GL L D + + GD+ + A + ++ + + Sbjct: 71 RHAHDFLVVAYVERGTGLLRLGDAEHDVGAGDVLVVPPGQVMGAAGDGLTRGFVRAVFFP 130 Query: 91 PE--------------RLKLNLDWQGAIPGFNA-------SAGQPHWRLGSMGMAQARQV 129 P+ R L L + G PG + A +P W AR++ Sbjct: 131 PDAVEGRSPGALRSWRRHPLLLPFVG--PGARSVRRLHVPQADRPRW---------ARRL 179 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR----L 185 LE E +Q + A L ++L++ R D P + E D L+ L Sbjct: 180 T-DLETEVAQGRRVGSAEAALAH-LTLLLVDVARLADD---PAAREAWDDPLVAAVFDVL 234 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 A +L E + + RQ+TG T+ Q+L + R+ A+ LL+ S LL+ Sbjct: 235 ARRSAEQLSLRDVAAEVGRTPGHVTTVVRQRTGRTVQQWLVEHRMAAARRLLEGSDLLVG 294 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 + G+ D YF+ VF R GM+P+ WRH + Sbjct: 295 AVGARVGYPDPAYFARVFRRSHGMSPAAWRHAS 327 >UniRef50_Q71VU1 Transcriptional regulator, AraC family n=21 Tax=Listeria RepID=Q71VU1_LISMF Length = 780 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 6/126 (4%) Query: 154 QLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF----ALDKFCDEASCSERVL 209 Q+++LL R + +P ++ + + DK I+R+ ++ F +L +F + SE L Sbjct: 138 QILLLLTR--FLKKGIPSSARKEVNDKRISRIIREVEERFDEALSLREFAQKEFLSEAYL 195 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 + F++ TG+ QYL +VR+ HA L HS I++I+ + GF +FS VF + Sbjct: 196 SRYFKKTTGLGFLQYLTEVRLKHAIQDLLHSAESITEIALKNGFSSQKHFSEVFKFHFEL 255 Query: 270 TPSQWR 275 TPS++R Sbjct: 256 TPSEYR 261 >UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH5_9FIRM Length = 302 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 54/99 (54%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L+K+I + P LD C + S + + F T ++ Y+ +VR+ A+ +L Sbjct: 201 LNKIIHYIKKYYMEPITLDSLCSTVNLSPSYIIKLFNHYTSLSPMAYVNRVRIEAAREML 260 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 + L +SDI+ + GF+DS YFS F TG+TP Q+R+ Sbjct: 261 AETPLSVSDIAAQTGFKDSFYFSKKFKAVTGITPRQYRN 299 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 12/248 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F E+ I+ G +++ + Y T G +F + +H + Sbjct: 30 HHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEHGEQQKAGTYSHQLHIGISN 89 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L L + P +A H L + +A Q++ +L H Q V A ++ L+ Sbjct: 90 LYLEGLARNVFPNKSALLDLSH--LHGAFLEKAWQIVHELNH---QEVESALQIKALVIE 144 Query: 154 QLVMLL-----NRHRYTSDSLPPTSSE--TLLDKLITRLAASLKSPFALDKFCDEASCSE 206 LV +L ++ L T L++ I L L++ + + Sbjct: 145 LLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETHHDEEITLEQLAEMLYVTP 204 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 L + F+ TG+ YL Q+R+ HA+ LL++ L + +++ G+ED+ +FS +F + Sbjct: 205 TYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYEDAYHFSKLFKKY 264 Query: 267 TGMTPSQW 274 G +PSQ+ Sbjct: 265 YGKSPSQF 272 >UniRef50_A1JKC5 AraC-family transcriptional regulator n=5 Tax=Enterobacteriaceae RepID=A1JKC5_YERE8 Length = 335 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 7/106 (6%) Query: 178 LDKLITRLAASLK-------SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 LD+L + + ++LK S L K + R + Q QQTG ++QY+ Q+R+ Sbjct: 222 LDELFSTILSALKHHNLYLDSQLNLSKLARKVGVPARKVSQAINQQTGQNVSQYVNQLRI 281 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 A LL + L + DI E GF+ + F+ F R GMTPS WR Sbjct: 282 EQAAQLLATTELSVIDIMLEAGFQTKSNFNREFMRVKGMTPSLWRE 327 >UniRef50_A4BFF7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BFF7_9GAMM Length = 324 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 57/93 (61%) Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 L P +L + A SER +R++F + T + QY+++VR+ A+ LL+ + L +++I+ Sbjct: 227 LNEPISLAQLAAVAGQSERQIRRRFSEATKESPMQYVQKVRLEEARALLRETNLSVTEIA 286 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 + CGF YF+ VF + TGM+ ++R + +K Sbjct: 287 SSCGFTGVAYFARVFRQSTGMSAGEYRQMVRKK 319 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 5/120 (4%) Query: 159 LNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTG 218 L R R SD ++ L+ K + + + P SE L FRQ+ G Sbjct: 1083 LERRRRLSDQ-----AQMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELG 1137 Query: 219 MTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 T +YL + RV A++LL S I++I+ E GF S+YFS VF +E G +P ++R L Sbjct: 1138 TTPVEYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRRLK 1197 >UniRef50_Q46N77 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46N77_RALEJ Length = 287 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%) Query: 168 SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 LPP+S L ++I + A L PF ++ A S R + FR+ TG T +++ Sbjct: 179 GLPPSS----LRRVIDYIEADLSRPFTINGLAQVAGVSPRHFMRAFRESTGQTPLRFVYG 234 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +R+ A+ L R ++++ +CGF + +FS F + TG+TPS +R ++ Sbjct: 235 LRLERAKEFLLDPRRSATEVALDCGFSHAQHFSTAFKKATGVTPSDFRRAATR 287 >UniRef50_UPI00017885E1 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017885E1 Length = 513 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 57/99 (57%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 L+ ++ T + + ++ D+ S LR F+++TGMTI+ YL ++R+ A+ L Sbjct: 412 LVHQVRTTIDQTFHQAITINSLSDQVYLSPNYLRSIFKEKTGMTIHDYLTKIRLNKAKEL 471 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L L + DI+ G+E ++YF +F + G+TP+++R Sbjct: 472 LADDSLKVQDIAQRVGYESTSYFISLFLKSQGVTPNEYR 510 >UniRef50_Q393N4 Transcriptional regulator, AraC family with amidase-like domain n=3 Tax=Burkholderia RepID=Q393N4_BURS3 Length = 330 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 53/92 (57%) Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 L+ PF+L + D + SER L ++F+ G +YL+ +R+ A+ LL ++L I I Sbjct: 239 LREPFSLARLSDHVAMSERTLHRRFKDAVGAPPLRYLQTLRIEVAKRLLAETKLAIDTIC 298 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 G+ D + F +F RETG++P ++R +Q Sbjct: 299 ERVGYADISGFRQLFKRETGISPGEYRRRFTQ 330 >UniRef50_Q7UVE6 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UVE6_RHOBA Length = 254 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 5/143 (3%) Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALD 196 S +P N+ G +V L R DS P S L K++ + + A+ Sbjct: 114 SCNKIPLLNQA-----GDVVALAGVKRPYHDSDAPESGHLRLLKVVQFVTQNYGEQIAVA 168 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 EA+ S L ++F + G+T N Y+R+VRV A++LL+ ++ I I+ GF D Sbjct: 169 DLAREANLSPSQLHREFIRLFGITPNHYIREVRVGVARHLLESTQEAIGSIAASTGFYDQ 228 Query: 257 NYFSVVFTRETGMTPSQWRHLNS 279 ++ + F TG+TP+++R S Sbjct: 229 SHLTRQFKASTGITPTEYRRTYS 251 >UniRef50_UPI000196B709 hypothetical protein CATMIT_00139 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B709 Length = 269 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 51/92 (55%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L A+ P +D+ CD CS L F+ + TI+++L R+ A LL + + + Sbjct: 175 LIANYSKPITIDQLCDFFFCSRGTLLTHFKSKYNTTIHKFLLDYRLKKAAELLTNKKQTV 234 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 +I+ +CGFED NYF VF +E +P ++++ Sbjct: 235 KEIAYQCGFEDPNYFCKVFKKEYQCSPLEFKN 266 >UniRef50_B5CYA2 Sensor protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYA2_9BACE Length = 1323 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 9/150 (6%) Query: 142 PFANEMAELLFGQLVM----LLNRHRYTSDSLPPTSSETLLDKLITRLAASLK-----SP 192 PF N++ + L ++ +L + + + S+ + DK + +L ++ S Sbjct: 1171 PFDNKIMKELLNSIITNRKRILQHKKVPAIKISEVSTTSTDDKFLEKLVKIIEDNITDSS 1230 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 F ++ C + VL ++ + G+T N ++R +R+ A LL+ R +S+++ + G Sbjct: 1231 FQIEDICKGLGVTALVLNKKLKALMGVTANAFVRSIRMKRAAELLKTGRYSVSEVTYDVG 1290 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 F D YF F +E G+ P Q++ + Q D Sbjct: 1291 FNDLKYFRECFKKEFGVLPQQYKEQSIQTD 1320 >UniRef50_C1DF31 Transcriptional regulator, AraC family n=2 Tax=Pseudomonadaceae RepID=C1DF31_AZOVD Length = 318 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 LA L ++ + E S S + F++ TG+ +++L ++RV A+ L+ H+ + + Sbjct: 199 LAEHLADGLSIAELAAECSLSRAYFSRAFKRSTGLAPHEWLLKMRVEKAKELMLHTSMSL 258 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 S I +CGF D ++FS VF + TG PS WR + Sbjct: 259 SRIGLDCGFTDQSHFSRVFQKMTGAAPSNWRRFH 292 >UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR07_9CLOT Length = 515 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 58/99 (58%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 L+D++ ++A+ +S L D+ S + + FR +TG+TI + + + R+ A+ L Sbjct: 414 LVDQISRYISANYQSNITLQDIADQIHISSAYVSRLFRNKTGITITEAINRARIDQAKLL 473 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L + + +I+ GFED+ YF+ VFT+ G +PS++R Sbjct: 474 LGNPEYKVYEIAQMVGFEDAAYFTSVFTKYVGCSPSEYR 512 >UniRef50_A9E084 Transcriptional regulatory protein, AraC-type n=1 Tax=Kordia algicida OT-1 RepID=A9E084_9FLAO Length = 287 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 2/247 (0%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H HDF LVI +G G HV++ + IT G +F + H + D+ + + E Sbjct: 40 HRHDFHLLVIFTKGTGTHVVDFNTFDITAGSVFALQPGQMHHWNLSEDIDGYILFHSKEF 99 Query: 94 LKLNLDWQ--GAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 ++ + P + ++ P L A + E S F + Sbjct: 100 YNVHFQHKQINDYPFYFSTYNTPELCLNHQQTANVSSFFEMILTEYSSKSLFKEHAILNI 159 Query: 152 FGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 + + L+RH T L T+L L K + + + + L + Sbjct: 160 LDLIYIELSRHYVTPTQLQIKRYHTILRNFEVILEQFYKHEKKPSFYASRLNITLKHLNR 219 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 R+ T + + A+ LL L I++I+ GFED +YFS +F ++TG TP Sbjct: 220 ICRETLDKTATTVITDRIILEAKRLLLTPELSINEIANLLGFEDYSYFSRLFKQKTGQTP 279 Query: 272 SQWRHLN 278 S++R L+ Sbjct: 280 SEFRSLD 286 >UniRef50_A7GDS9 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=A7GDS9_CLOBL Length = 329 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 56/94 (59%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 ++ L+ P +L K + + S L++ F+ TG T+ +Y+++ R+ A+YLL+++ + I Sbjct: 233 ISKDLREPPSLKKLAGDLNISLYKLQKAFKNSTGNTVYEYIKKSRIEKAKYLLKNTNMSI 292 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 +I+ E G+E+ + FS F M P ++R LN Sbjct: 293 LEIANEIGYENPSKFSNAFKGYNNMNPLKYRKLN 326 >UniRef50_A8U8W0 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8W0_9LACT Length = 404 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 52/84 (61%) Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +L + + + L ++F+ +TG TI +++ R+ H++ L++ + L I+DI+ + GF Sbjct: 321 SLSTISTKLNINATYLSKRFKVETGQTITHFIQDARINHSKQLIKDNDLSITDIALKVGF 380 Query: 254 EDSNYFSVVFTRETGMTPSQWRHL 277 E+SNYF VF + TG+TP + L Sbjct: 381 ENSNYFCTVFKKRTGVTPRHYFEL 404 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 55/98 (56%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L K+ L A+L +PF L S L +QF+Q TGM+ +++ R+ A LL Sbjct: 207 LQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRACRLL 266 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + + L + DI+ E G+ ++FS VF R+TGM P+ +R Sbjct: 267 RETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYR 304 >UniRef50_C6CSB2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSB2_PAESJ Length = 270 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 ++ IT + P L A SE F++QTG T+ YLR +R+ A+ L Sbjct: 165 IEDTITYMNEHYMLPLTLSMLAGRAGMSEGHYTVLFKKQTGRTMTVYLRSLRIEKAKQLF 224 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 + +RL +I+ + GF D YFS +F +E GM+PS++ Sbjct: 225 RQTRLPAKEIAQQVGFSDYFYFSRMFKKEVGMSPSEY 261 >UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWZ8_9DELT Length = 318 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 48/97 (49%) Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 I L S LD A S+ +QF Q GMT YLR +R+CHA L+ + Sbjct: 220 IRNLEVEGPSNVTLDDLAQVAGLSKYHFLRQFSQVVGMTPGAYLRTLRLCHAARKLRTTD 279 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 L I +++ GF D FS F R GMTPS+++ L Sbjct: 280 LPILEVALSVGFADHPSFSRAFARHMGMTPSEYQKLG 316 >UniRef50_A6NTA8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTA8_9BACE Length = 345 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 6/107 (5%) Query: 172 TSSETLLDKLI--TRLAASLKSPFA-LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 +S +T+L I RL AS A L +FC CSE L + F+++TG+ IN Y+ +V Sbjct: 207 SSEDTILTHAIEYIRLNASGHITMADLSRFCH---CSESYLSRIFKRRTGININVYVNKV 263 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 R+ A+ L S I++I+ GF D NYFS VFT G++P+++R Sbjct: 264 RIELAKNHLLLSSENIAEIAAGVGFNDPNYFSRVFTNIIGISPTEFR 310 >UniRef50_Q89EV8 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89EV8_BRAJA Length = 308 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + A L S + E + + FR+ TG+ +++L Q+R+ A+ L+ ++L + Sbjct: 212 MRARLASNLTIADVAAECKLTPSHFARSFRRSTGVAPHEFLSQLRIDEAKRLMLSTKLPL 271 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +DI+ CGF D +YF+ VF+R G +P WR S+ Sbjct: 272 ADIALICGFGDQSYFTRVFSRNVGASPGAWRRARSE 307 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 6/246 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H + EL + G ++ ++D + + +GDL ++ D HS AS L+ + ++ R Sbjct: 33 HEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLFERVLIGFSR 92 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 + G + + R+ + +++ + E + + L Sbjct: 93 TFIEQGDAGVANLLDHGTSRL-IRIPLKHQPEIERLLHSMLAECQTEQTHYSSLVRSLMN 151 Query: 154 QLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF----ALDKFCDEASCSERVL 209 +L++ L+R T S + K I+ +A +KS F L++ + S L Sbjct: 152 ELLIRLHRIETTLQSQTHEYEHPMHQK-ISEIAQYIKSNFHEKLTLEQVAKQFYISPSYL 210 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 + F + TG +Y++ VR+ AQ +L SR + IS GFE +F+ F + G Sbjct: 211 SRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFNKTFKKIAGT 270 Query: 270 TPSQWR 275 TP Q+R Sbjct: 271 TPLQYR 276 >UniRef50_Q13JD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD5_BURXL Length = 322 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 54/98 (55%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L +I + A L SP L + + A S ++FR+ TG T +QY+ + R+ AQ LL Sbjct: 221 LRHVIEYIDAHLSSPIGLAELANVAGLSRMHFARRFREVTGQTPHQYVLRCRIMRAQQLL 280 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L ++DI++ F+ + +FS VF G +P+QWR Sbjct: 281 CSPALSVTDIASALAFKTTAHFSTVFRHIVGESPTQWR 318 >UniRef50_C6CUK7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUK7_PAESJ Length = 301 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 46/67 (68%) Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L Q F++ G+TI Y++Q+R+ A++LL + L ++DI+ +CGFED YFS +F + G Sbjct: 229 LCQIFKKNAGITIGTYVQQLRIQRAKHLLASTNLSVADIAKQCGFEDPFYFSRIFKKIEG 288 Query: 269 MTPSQWR 275 + PS +R Sbjct: 289 LGPSSYR 295 >UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacillaceae RepID=A4ITD0_GEOTN Length = 366 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 57/105 (54%) Query: 173 SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 +++ L+++ + + + P + + + S FRQ+TG T N+Y+ +RV Sbjct: 255 TNDWLIERALEYIRQFYREPIKASEVANVVNISANYFSTIFRQKTGKTFNEYVNLLRVNE 314 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 A+ LL + L + I+ GF + YF VF + TGMTP+++R+L Sbjct: 315 ARKLLSETSLRVGVIANNVGFHEYKYFVEVFKKFTGMTPTEYRNL 359 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 49/84 (58%) Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P + + S LR FR +TGMTI+ YL ++R+ A+ +L L + DI+ + Sbjct: 447 PITIQSLSSQVYLSPNYLRSIFRDKTGMTIHDYLTRIRLEKAKEMLADPSLKVQDIAQKI 506 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 G+E ++YF +F + G+TP+++R Sbjct: 507 GYESTSYFISLFVKNQGVTPNEYR 530 >UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q391T4_BURS3 Length = 288 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 L ++ DE S R L + F +TG++ +Q+ +Q R+ A+ LL R +I+ ++ E G+E Sbjct: 203 LTEWADEVGASSRTLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIA-VAAELGYE 261 Query: 255 DSNYFSVVFTRETGMTPSQWRHLN 278 ++ FS VF R GMTPS + L+ Sbjct: 262 TTSAFSTVFRRFAGMTPSAYAKLS 285 >UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AXU1_ENTCA Length = 299 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 16/257 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND-LVLQNIIYCPE 92 H H CE++ V +G + D+ + R D +I+A +H+ D + NI + Sbjct: 28 HQHPACEIMFVTKGKCKIKVQDQVIVLERNDFVFINAFVEHALLVEGDSCTILNIEFLLS 87 Query: 93 RLKLNL---DWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH----ESSQHVPFAN 145 L D I G N +P+ + S + Q Q I L + +Q P A Sbjct: 88 ETPSGLCVRDVFAYIKG-NVQLNEPYAK--SRDVRQFGQAIKSLLQLLMIDDTQEQPSAE 144 Query: 146 E--MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 ELLF +++M L T ++ ++ I + + + Sbjct: 145 RQFTIELLFKRMLMELAFSLRTKET---KRGNCYVNAAINYIQQHFDEDIQVSQIAAAVG 201 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 ++ L + F +Q G+T+N +L R+ A +LL +S+L I +I+ + GF +F+ F Sbjct: 202 ITKTYLHKLFHEQLGVTVNHFLTSERLKQAAFLLSNSQLPIVEIAAQAGFNSRQHFTNTF 261 Query: 264 TRETGMTPSQWRHLNSQ 280 ++ GM+P ++ L Q Sbjct: 262 KQKKGMSPKAYQLLYKQ 278 >UniRef50_UPI0001C362BB response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362BB Length = 482 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 58/107 (54%) Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 T ++D +I + K L+ +E S L ++F Q TG++I YL R+ Sbjct: 373 TGRSEIVDNVIRYIKNHYKEDINLNVLANEFFLSPAYLSRKFSQTTGVSIMSYLEDYRIN 432 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 A LL+ S IS+I+ + G+ D+NYF+ +F + G+TP ++R ++ Sbjct: 433 VATDLLKGSERSISEIADQVGYYDANYFTKIFKKVKGITPKEFRKMS 479 >UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CUK1_AGRT5 Length = 297 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 24/267 (8%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS---VND 81 R P+ F H H EL + G+ + D GDL + + H++ S +N Sbjct: 22 RLPEFPFNWHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGPNLPHAWQSHGLINA 81 Query: 82 LVLQNIIYCPERLKLNLDWQGAIPGFNA--SAGQPHWRLGSMGMAQARQVIGQL-EHESS 138 + + C DW + SA P G+ + ++ E ++ Sbjct: 82 PGVHRAVVC----WFTRDWIEGLIALTPELSAITPLLVESGHGICFGEDALAKVGERLAT 137 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL----------LDKLITRLAAS 188 H + L G LV L SD P ++ E + +++ + A Sbjct: 138 LHKIAPEQQILTLLGVLVDLAR----VSDRRPLSAGEVTASTAPRDRARMQRVLNHIHAH 193 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 ++ + A S+ L++ F++ T MTI+QY+ Q+RV A LL + L ++ I+ Sbjct: 194 YIGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLAQTDLSLARIA 253 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWR 275 E GF D+ +FS F GMTP +R Sbjct: 254 EETGFSDAAHFSRQFRAARGMTPGDYR 280 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 1/155 (0%) Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR-HRYTSDSLPPTSSETLLDKLI 182 ++ ++I ++E+E + F+ M + F +L++ L+R +D E ++ Sbjct: 111 SRVEELIRRIEYEETGQDGFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAA 170 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + ++P L++ + + S ++F+ TG +YL +R+ A LL HS Sbjct: 171 KYIYDHYQNPITLEEVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSAC 230 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +++I+ CGF D NYF F + G++P +R + Sbjct: 231 SVTEIADRCGFGDGNYFGDAFRKAKGVSPRAFRKM 265 >UniRef50_C2HBK3 AraC family response regulator n=19 Tax=Enterococcus faecium RepID=C2HBK3_ENTFC Length = 502 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 43/63 (68%) Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F ++ G+ ++YL++VR+ A+ L +RL +++I + G+ + YFS VF ETGMTPS Sbjct: 434 FTEKFGINFSKYLKKVRISKAKLFLTETRLTLTEICEKVGYTELGYFSRVFKEETGMTPS 493 Query: 273 QWR 275 Q+R Sbjct: 494 QYR 496 >UniRef50_Q39M95 Two component transcriptional regulator, AraC family n=29 Tax=Burkholderia RepID=Q39M95_BURS3 Length = 278 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%) Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 LP L+ L L+ P AL++ + E+ L + FR G T+ +YLR Sbjct: 152 LPDNPDAALVRAASEVLLRDLRHPPALEELARQVGTHEKRLSRVFRDHLGQTVFEYLRDT 211 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 R+ A + L + + I DI+ E GF F+ F G+TPS WR Sbjct: 212 RLRAAMHFLAETSMGIGDIAEEIGFSTPGNFATAFRERFGITPSDWR 258 >UniRef50_A7B093 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B093_RUMGN Length = 413 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 52/100 (52%) Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 +++ K++ L L + L+ + L F ++ G ++ Y+ R+ HA+ Sbjct: 300 SIIRKVVAYLETDLSADLTLNTLAQHLGVNASYLSTLFTKEMGTSLTDYVNHYRIDHAKT 359 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LL ++ + I DI+ CG D +YF+ +F R +GMTP WR Sbjct: 360 LLANTDVPIKDIALRCGIGDVHYFTRLFKRISGMTPKAWR 399 >UniRef50_D2QPY1 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPY1_9SPHI Length = 281 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 16/257 (6%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH---SYASVNDLVLQ 85 DVF H H E+V + NG + D R DL +I + H Y D + Sbjct: 26 DVFLWHYHPEYEIVYIEGANGTRHVGDHISRYEGSDLVFIGPNIPHLNFDYGVKTDHT-K 84 Query: 86 NIIYCPERLKLNLDWQGAIPGFNASAGQ-PHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 ++ E + WQ P F A R G Q +Q +G+ ++ + PF Sbjct: 85 VVVQLKENFLGEVLWQA--PEFAAITQLFARARSGISFYGQTKQRVGERLNQLANLPPFE 142 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSS------ETLLDKLITRLAASLKSPFALDKF 198 M L G +L YT +S + L ++ +A ++ + Sbjct: 143 RLMQ--LLGIFQLLATSQEYTPLQGEAVASAYNLNEQQRLKRVNQFIAEHYTRRLSISEA 200 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 AS +E + F++ T +T Q+L Q R+ AQ LL +S+ CGFE +Y Sbjct: 201 ATVASLTEAAFCRYFKRMTRLTFTQFLNQYRISQAQKLLLLDNT-VSEACFACGFESLSY 259 Query: 259 FSVVFTRETGMTPSQWR 275 F+ +F R TG P Q++ Sbjct: 260 FNKIFRRVTGENPLQFK 276 >UniRef50_A6BJV8 Putative uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A6BJV8_9FIRM Length = 508 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 64/124 (51%) Query: 156 VMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQ 215 VM+ R + TSSE L+ K +T + L++ +E+ L Q ++ Sbjct: 385 VMMELFSRIEISQINQTSSEYLVQKALTIMKECYSDGITLEETARRLHVTEQYLGTQLKK 444 Query: 216 QTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +TG + + +R+ ++ H + LL + L ++ I+ GF + Y S VF +E GM P+++R Sbjct: 445 ETGTSFTETVRKFKIMHVKELLLDTDLKLNQIAAMTGFSNPKYMSKVFKQEEGMLPNEYR 504 Query: 276 HLNS 279 +N+ Sbjct: 505 RINA 508 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 53/98 (54%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L K++ + SP L + + + +E+ + F++ G TI +Y+ +RV A L Sbjct: 222 LKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKTITEYINVIRVEKAATAL 281 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + I DI++ CGF++ YF F +E GMTPS++R Sbjct: 282 AETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYR 319 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 + P LD S + + F+++ +T ++Y+ Q+RV HA+ LL ++ + +I+ Sbjct: 428 FREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEHAKQLLSLTQKSLKEIT 487 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWR 275 E G++D NYFS VF + TG +PS +R Sbjct: 488 YEIGYKDPNYFSRVFKKLTGKSPSDYR 514 >UniRef50_A8RL03 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL03_9CLOT Length = 299 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 34/268 (12%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 F +HDF ELV V RG + DR + +G++ + ++ H+ VL N Sbjct: 31 FPGESHDFWELVCVDRGEIDALAGDRRLTLKKGNILFHKPNEFHN-------VLTNGKVS 83 Query: 91 PERLKLNLDWQG-AIPGFN---ASAGQPHWRLGSMGMAQARQVI-GQLEHESSQHVPFAN 145 P + + + AI F S L + + +AR G+L+ + + F + Sbjct: 84 PSLVVIGFECHSPAIKSFEDQLMSVQDTEKELMAQIIVEARNTFSGRLDDPYQEELIFNS 143 Query: 146 EMAELLFG----------QLVMLLNRHRYTSDSLPPTSSETL---------LDKLITRLA 186 E L FG QL++ L R RY S SLP SS L ++++ + Sbjct: 144 E--PLTFGSAQLISHYLEQLMIHLYR-RYFSYSLPVRSSRFLAEASSGNDTYNRIVRYME 200 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 L +D+ C + L++ FR G + ++ +++ A+ +++ ++L + Sbjct: 201 EHLGERMTIDRICRDNLVGRSQLQKLFRDTKGCGVIEFFSMMKIDTAKQMIRDNQLNFTQ 260 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQW 274 I+ G+ +YFS F + T MTPS++ Sbjct: 261 IADRLGYNSIHYFSRQFKQITTMTPSEY 288 >UniRef50_Q5L870 Sensor protein n=4 Tax=Bacteroides RepID=Q5L870_BACFN Length = 1307 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 15/153 (9%) Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD--------KLITRLAASL---- 189 PF +++ G + L NR + S + T S +LLD + ++ A + Sbjct: 1157 PFDLAFLKVVVGNI--LKNREKIHSQYVTVTGSLSLLDLTNSKADEDFMKKINAVIHENL 1214 Query: 190 -KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 F++ + D S L + + TGM +N Y+ ++R+ A LL ++ L I++IS Sbjct: 1215 SDEEFSVQQLADAMIVSRSSLYSKIKIITGMGVNDYINRLRIEQAMSLLVNTNLNINEIS 1274 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 E GF YFS F TGMTP Q+R+ K Sbjct: 1275 CEVGFTYPRYFSSTFKSMTGMTPKQFRNEKCNK 1307 >UniRef50_B8IDB6 Transcriptional regulator, AraC family n=6 Tax=Rhizobiales RepID=B8IDB6_METNO Length = 306 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%) Query: 163 RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTIN 222 R + L P+ + D++ RL L LD DEA S + F+ G+ + Sbjct: 177 RPVTGGLSPSIRRRIADQVEARLGDVLT----LDVLADEAGLSTFHFAKMFKASFGVAPH 232 Query: 223 QYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +Y+ + R+ A+ LL R +++I+ CGF ++F+ F + TG TP QWR Sbjct: 233 RYVIERRIARAKSLLADGRTSLAEIAAACGFASQSHFTRSFKQATGATPGQWR 285 >UniRef50_A9BSQ5 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BSQ5_DELAS Length = 339 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 56/105 (53%) Query: 171 PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 P + ++L I L A ++ P+ L D AS S R L + F+Q+ G + +L ++R Sbjct: 218 PATRNSVLAHAIAWLEARVEQPYDLQALADAASTSPRTLLRHFQQELGHSPLDHLHRLRC 277 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 A+ LL+ + + ++ CG+ D++ F VF R GM P+ +R Sbjct: 278 ARARVLLEITLESVPSVALACGYGDASAFRRVFLRYVGMAPAAYR 322 >UniRef50_C0AAT3 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAT3_9BACT Length = 341 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 46/85 (54%) Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 SP LD+ +A S + + FRQQTG T+ YL +VR+ AQ LL S L +++I+ Sbjct: 242 SPLTLDEIAWQAKLSREHVARTFRQQTGQTVFDYLARVRIEAAQQLLTDSALPVTEIAHR 301 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWR 275 GF F VF R G TP +R Sbjct: 302 TGFSSPTLFGRVFKRLIGQTPQAYR 326 >UniRef50_A8UP06 Sensor protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP06_9FLAO Length = 1315 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 10/144 (6%) Query: 142 PFANEMAELLFGQLVMLLNRH-RYTSD--SLPPTSSETLLDKLITRLAASLK-------S 191 PF + +L+ L+ + Y S L T+ ++L L A+L+ + Sbjct: 1168 PFDKDELQLIIKNLIQKKQKQVDYFSKLLKLKENPKNTVANQLDLNLIANLQEHILNKSN 1227 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 ++++ + S L ++ + T M++ Y+ +RV A++LL++++L ++I+ E Sbjct: 1228 KLSIEQLAKKLGTSRTQLHRKIKALTNMSVTNYINHIRVEKAKFLLKNTKLNSNEIAYEI 1287 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 GFE S YFS VF +E G+TP+ +R Sbjct: 1288 GFESSTYFSRVFKKELGITPAIYR 1311 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/271 (21%), Positives = 107/271 (39%), Gaps = 37/271 (13%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + A+ P V +C L + +G +N Y + G F+I D + Y + Sbjct: 21 TIGEAEMMPGQVCGPRVRSYCLLHYITKGKCKFQVNGMTYHLQAGQGFFIAPDFETRYET 80 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL-GSMGMAQARQVIG------ 131 D N W GA AG+ L +G++QA + Sbjct: 81 DGDE------------PWNYIWVGA-------AGEEMKHLMHVLGLSQANPIFSCHQGDR 121 Query: 132 -------QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 L+H M+ L + + +L+ R + P S + + ++T Sbjct: 122 LVHCVRDMLQHRQMTMTDHYFRMSTLY--RFIAILSEERQVNQ--PLASVNSYIANVMTY 177 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + L + + + + L FR QTGMT+ Y++ R+ A+YLL+ + L I Sbjct: 178 VRHHLHEHMSTAEIAATMNLNRSYLSSLFRSQTGMTLRSYIQLCRMTRAKYLLESTHLSI 237 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + I+ CG+E S+ + F + G++P+ +R Sbjct: 238 ASIAESCGYEKSDSLNRTFRKTYGISPADYR 268 >UniRef50_A9KN27 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A9KN27_CLOPH Length = 323 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 30/268 (11%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL----VLQN 86 F +H HD+ E+V V +G+ H +N+ P + GD+ ++ ++H Y ++ + + N Sbjct: 62 FPKHKHDYIEVVYVCKGSLTHTINNVPVVLEEGDILFL---NQHIYHAIKEAGKEDIAIN 118 Query: 87 IIYCPERLKLNLDW---QGAIPGF------NASAGQPHWRLGSMGMAQARQVIGQLE--- 134 +I P ++ + F NAS + + G+ + ++ L Sbjct: 119 LIILPHFFDVSFSMIQKDNVLADFLVGILRNASHKEQYLHFKVKGILEIENLLENLVYSL 178 Query: 135 -HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP---PTSSETLLDKLITRLAASLK 190 H++S + + LLF LV +Y SDSL P S E ++ K Sbjct: 179 VHDASNNDMINQRVMGLLFLYLV------KY-SDSLKAGSPNSYEDVIAKAAVNYIDINY 231 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 +L + ++ S L + +TG + + L++ R A LL + L I+DI Sbjct: 232 KTASLTELAEKLCLSLSSLSRLIASKTGKSFRELLQEKRFEVAISLLAETNLSITDIVVA 291 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRHLN 278 G+E++++F F M+P ++R N Sbjct: 292 VGYENNSFFHRKFRERYHMSPKEYREKN 319 >UniRef50_A3NPT2 Transcriptional regulator, AraC family n=35 Tax=Burkholderiaceae RepID=A3NPT2_BURP0 Length = 409 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 51/89 (57%) Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 +L P L + A+ SER L ++F TG+T+ +Y+ +RV A +LL+ SR+ + I Sbjct: 278 ALAHPPTLAELAARAAMSERTLSRRFAAATGLTLRRYVAALRVELAAFLLRTSRMTLEHI 337 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRH 276 + ECGF ++ S F G +P Q+R+ Sbjct: 338 ADECGFASASALSHAFLAGQGCSPIQYRN 366 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 51/98 (52%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L + + L L PF L K + SE + F++ TG++ ++Y + RV AQ LL Sbjct: 232 LRRAVAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLLL 291 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 Q + I I G+ ++F+ VF RETG+ PS +R Sbjct: 292 QETDTSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYR 329 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 20/210 (9%) Query: 71 DDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV- 129 DD + Y V+ + LQ I E + +P F Q LG + R Sbjct: 95 DDHYLYVQVSSIFLQRI--SEEISETGTGKVELLPNFQTRDPQVESLLGLLHAEVHRNGQ 152 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITR-L 185 +GQL ES AN +A V L H T + S L D+ L+TR + Sbjct: 153 MGQLYSES-----LANALA-------VSFLRNHASTQPQVAQYES-GLGDRKLLLVTRYI 199 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 A +L+ L S+ +QF++ G+T QYL Q R+ A+ LL+ ++ + Sbjct: 200 ADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQSLV 259 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 DI+ CGF+ ++FS F + TGMTPS +R Sbjct: 260 DIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_B5HDN5 Predicted protein n=4 Tax=Actinomycetales RepID=B5HDN5_STRPR Length = 322 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 5/243 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F E+V V G G HV++ +R+ L I H + V L +++ + Sbjct: 59 HRHTFYEIVHVTGGTGAHVIDLSRWRLRPPHLCVIAPGQVHHWDDVTGLEGSVVLFTEDF 118 Query: 94 LKLNLDWQGAIPGFNASAGQPHWR-LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 L LD G A +P WR L A+ ++I L+ E + + L Sbjct: 119 L---LDHPGDRELLRRIAERP-WRDLDEQTHARTARLIADLDEEYRRGAAGFATVLRALL 174 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 LV+ R + PPT + ++ + +A + + ++ D S L + Sbjct: 175 HVLVVRTARLPEPAPPPPPTRHGAVAEEFLRLVARNEPALWSAAACADRIGVSVGYLAEA 234 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 + TG T + +R+ R A+ LL + L + ++ GF D YF F RETG++P Sbjct: 235 VKAATGRTPGRLIREARTHEAKRLLARTDLTVRQVAARVGFTDPAYFCRFFRRETGVSPG 294 Query: 273 QWR 275 +R Sbjct: 295 GFR 297 >UniRef50_A6KXT8 Sensor protein n=10 Tax=Bacteroides RepID=A6KXT8_BACV8 Length = 1310 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 9/124 (7%) Query: 161 RHRYTS-DSLPP-------TSSETLLDKLITRLAASLKSP-FALDKFCDEASCSERVLRQ 211 R RYT LPP ++ E L++L + L + + C++ S L Sbjct: 1179 RTRYTDIGPLPPPEEGTFSSADEEFLNRLNQIITEHLDNEQLGIPFICNKIGISRASLYN 1238 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 + + T M N Y+ ++R+ A +L+ H+ L ++DI+ + GF + YFS VF + TG +P Sbjct: 1239 KLKALTDMGANDYITKIRMERAIWLILHTELSVNDIADKTGFSTARYFSTVFKQHTGCSP 1298 Query: 272 SQWR 275 +Q+R Sbjct: 1299 TQYR 1302 >UniRef50_A7B0G0 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0G0_RUMGN Length = 289 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 52/82 (63%) Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 +D C E S S+ + F++Q G+T++QY+ + R+ ++ LL +S+L I+ I+T+ GF Sbjct: 206 IDTICSEISFSKHYFCKLFKKQMGITVHQYVNEYRISKSKELLSYSKLSINSIATQVGFR 265 Query: 255 DSNYFSVVFTRETGMTPSQWRH 276 ++ F F + MTPS++R+ Sbjct: 266 NTLTFLRAFEKSMHMTPSEYRN 287 >UniRef50_UPI000178A004 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A004 Length = 514 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 LK P +L ++ S + + FR++TG T+NQY+ ++R+ A LL+HS + +I+ Sbjct: 425 LKEPISLPVIAEQVGLSPHYISKLFREETGSTVNQYITRLRMEKAIELLRHSNKKVYEIA 484 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWR 275 E G YF+V F TG++P+ ++ Sbjct: 485 EEVGIPSYRYFTVTFRNWTGVSPTDYK 511 >UniRef50_C6D708 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D708_PAESJ Length = 766 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%) Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 I + A+ + ++D + S L + F++ GMTIN YL Q+R+ A LL Sbjct: 661 IDYMDANFNNNISVDTVAEYVERSSSYLSRIFKESMGMTINDYLIQLRIRRATELLGQVN 720 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 L I +I E G+ + +YF+ +F TG+TP Q+R Sbjct: 721 LSIEEICHEIGYANVSYFNKIFKARTGLTPGQYRQ 755 >UniRef50_Q5WC89 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC89_BACSK Length = 509 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 48/73 (65%) Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L ++F QQTG +++QY +V++ A+ L+Q + L + DI+ G++D YFS F +E G Sbjct: 182 LSEKFAQQTGKSVSQYAAEVKLTEAKRLIQTTTLPLKDIAHRIGYDDEFYFSRKFKKEVG 241 Query: 269 MTPSQWRHLNSQK 281 ++PSQ+R +K Sbjct: 242 LSPSQYREKKMRK 254 >UniRef50_A1B241 Transcriptional regulator, AraC family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B241_PARDP Length = 306 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 5/133 (3%) Query: 153 GQLVMLLNRHRYTSDSLPPTSSET-----LLDKLITRLAASLKSPFALDKFCDEASCSER 207 GQ + LL + P SET L++++ L L P + + E S Sbjct: 172 GQCLALLGHALEEVAAHPQQGSETRNPCLLVERISALLCERLAEPITMTEIEHEFGLSSV 231 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L Q FR +T T+ ++LR++R+ A+ L++ + ++I+ +CGF D+++ S VF + Sbjct: 232 TLNQLFRTRTRETVFEHLRRLRIEAAERLIRQTDRSFTEIAADCGFSDASHLSNVFRKRF 291 Query: 268 GMTPSQWRHLNSQ 280 G T S WR Q Sbjct: 292 GTTASAWRRAGKQ 304 >UniRef50_D2LWT4 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWT4_BACS4 Length = 294 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 19/197 (9%) Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA---------QARQVIGQLEHESSQHVPF 143 + K + DW I + P ++L A QA Q I +L S P Sbjct: 97 KKKHDFDWSNVIIKESTLVEAPEYKLHIPRYAAFRNKERGIQAIQSILELNDSSD---PA 153 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLP-PTSSETLLDKLITRLAAS-LKSPFALDKFCDE 201 +LLFG L++ L + D++ PTS++ + D+++ + + L F + + E Sbjct: 154 EKMRQQLLFGDLMIQLQK-----DAVELPTSAQNVTDEVVRYIKRNYLIEGFTVKEMAQE 208 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + + ++ GMT Q+L R+ A+ + + ++ ECGF D +YFS Sbjct: 209 LLYHPDYITRSMKKVIGMTPIQFLNHYRLSMAKSKIIRGNHDLDTVARECGFSDVSYFSR 268 Query: 262 VFTRETGMTPSQWRHLN 278 +F ++ GMTP Q+R ++ Sbjct: 269 IFKKKEGMTPGQYRRMS 285 >UniRef50_A7AAX3 Sensor protein n=2 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AAX3_9PORP Length = 1361 Score = 63.9 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Query: 175 ETLLDKLITRLAASLKSP-FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 E L + + + ++++P F + FC+ S +L ++ + M+ N+++R +R+ A Sbjct: 1255 EKFLKEAMDIVKKNMENPEFDVKHFCEIMQVSNSMLYRKLKSLANMSPNEFIRSIRLNTA 1314 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 + L++ R +SDI+ GF+D++YFSV F +E MTP ++ Sbjct: 1315 KELIKQRRGNVSDIAYLVGFKDAHYFSVCFKKEFNMTPGEY 1355 >UniRef50_C6CV61 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV61_PAESJ Length = 532 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 4/102 (3%) Query: 179 DKLITRLAASLKSPFALD----KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 +KL + A + F LD E + + F+QQ + +YL ++R+ +A Sbjct: 429 NKLFESILAYVHEHFRLDISRESVAREVYVTPGYISYLFKQQMQTSFIEYLHRIRIEYAS 488 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LL+ L ISDI+ E G++D YF VF + TGMTP+Q+R+ Sbjct: 489 RLLKDPSLRISDIAHESGYQDEKYFFQVFKKHTGMTPTQYRN 530 >UniRef50_B5JFL8 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFL8_9BACT Length = 385 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 50/98 (51%) Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L K + + A P ++D EA S VL+++FR T+ + + VR+ A+ +L Sbjct: 282 LVKALRYIRAHACDPVSVDDIAREAGVSRSVLQRRFRNSLNQTVLEAILAVRINRAKEML 341 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +RL + D++ CGF Y VF + G TP Q+R Sbjct: 342 ATTRLALPDVAERCGFRHQEYLGYVFKKRIGCTPGQYR 379 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 13/247 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGD-LFYIHADDKHSYASVNDLVLQNIIYCPE 92 H HD+ EL + G H++ DR Y I G+ L + HSY N + ++Y Sbjct: 24 HYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLVYFS- 82 Query: 93 RLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAEL 150 K +D + G +P R + ++ + + + H + + + + Sbjct: 83 --KEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHTLLNM 140 Query: 151 LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 LL R + P + D +I+ + + + ++D+ + S L Sbjct: 141 ------ALLTIARNIQTPVKPEKRNRITD-VISYIHQNYQEDISIDQLAQMSYVSPYYLC 193 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 ++F++ T TI QY+ RV +AQ + + I++IS + GF + +F+ VF GMT Sbjct: 194 REFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMT 253 Query: 271 PSQWRHL 277 PS +R + Sbjct: 254 PSNFRKM 260 >UniRef50_C9L8Z4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9L8Z4_RUMHA Length = 266 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 51/88 (57%) Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 + + C+ A E R+ F++QTG + +YLR +R+ A L S +SDI+ G Sbjct: 179 YTTARLCEMAGLGETRFRKLFKEQTGKSPGEYLRDMRMTVAGRRLLLSAESVSDIAYSVG 238 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +ED N+F VF + G+TP+Q+R ++ + Sbjct: 239 YEDVNFFIRVFKKYFGVTPNQYRKVSKE 266 >UniRef50_UPI0001C35B7C two-component system, response regulator YesN n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B7C Length = 411 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 55/100 (55%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 ++ K+I ++ +L S L + S L F+++ G+T+ Y+ + RV A + Sbjct: 306 VIQKVINQINLNLTSDLGLKDLSEMFHISANYLSSLFKKEMGITLTDYVNKRRVEQAVFY 365 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 L + + I I++ CG +D NYF+ +F + GMTPS++R Sbjct: 366 LNTTDMQIQTIASYCGIQDINYFTRIFKKFIGMTPSKFRE 405 >UniRef50_UPI0001C34E2F two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E2F Length = 583 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 68/119 (57%), Gaps = 3/119 (2%) Query: 158 LLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQT 217 L+NR + S E + ++ + +LKS + + ++ + + + + F+ +T Sbjct: 458 LMNRLSFPEGS---GRGEEMAGRIKGLIKENLKSGISRREIAEKLNLNPDYVNRLFKSET 514 Query: 218 GMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 GMT+ +Y + R+ A++LL+HS L +S ++ E G+++ ++F +F +ETG TP Q+R Sbjct: 515 GMTVKEYAIKKRMKQAEHLLKHSDLAVSAVAAEVGYDNFSHFIRMFRKETGYTPKQYRK 573 >UniRef50_D2B3G2 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=D2B3G2_STRRD Length = 296 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 56/121 (46%) Query: 156 VMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQ 215 V LL RH P + + I + L P L DE S L + F + Sbjct: 175 VHLLTRHSRLPGQRAPVREDARVRAAIALMRDRLAEPLTLADIADEVYLSVYHLVRVFNR 234 Query: 216 QTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 TG T +++L ++R+ AQ+LL+ + L ++ I+ CGF S F R TG PS +R Sbjct: 235 ATGETPHRFLTRLRIEKAQHLLRDTDLAVAQIAPLCGFASPGALSTAFLRHTGARPSAYR 294 Query: 276 H 276 + Sbjct: 295 N 295 >UniRef50_C0D0A3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D0A3_9CLOT Length = 487 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 44/66 (66%) Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L + F+ +TG TI Q++ +R+ A+ LL+++ L + +I G+EDSNYFS VF + G Sbjct: 419 LSKWFKDKTGATITQFVENLRMERARELLEYTSLSVGEIGRRVGYEDSNYFSRVFKKIYG 478 Query: 269 MTPSQW 274 + PS+W Sbjct: 479 IPPSKW 484 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 4/245 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS--YASVNDLVLQNIIYCP 91 H H + E+ + G +N Y + GD+ I + H Y + I + Sbjct: 36 HYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFSR 95 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN-EMAEL 150 + + L G F QP + S + +++ Q++ E Q + ++ L Sbjct: 96 DTVTSFLSLCGR-EAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSL 154 Query: 151 LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 L LV+L + +E + + + + L + A+ S Sbjct: 155 LHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFS 214 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 ++F+ TG+ +YL +RV A +L+++ L ++ ++ CGF D NYF VF R TG++ Sbjct: 215 KKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVS 274 Query: 271 PSQWR 275 P ++R Sbjct: 275 PREYR 279 >UniRef50_C7PEC1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC1_CHIPD Length = 290 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/249 (19%), Positives = 104/249 (41%), Gaps = 10/249 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY---ASVNDLVLQNIIYC 90 H H+F + + G G H ++ + + + ++++ HS+ V+ ++ Sbjct: 41 HKHNFYHVTLFTEGAGTHTIDFKTFTVKPYQIYFMIPGQVHSWQFEGKVDGYIINFSFNF 100 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAEL 150 + L D+ P F + L ++ +L E Q + +M ++ Sbjct: 101 LQSLLQKPDYLEQFPFFTGDVDEAVINLPEQLHTPITRIFEELIREIEQPADMSVDMIQV 160 Query: 151 LFGQLVMLLNRHRYTSDSLPPTSSETLL----DKLITRLAASLKSPFALDKFCDEASCSE 206 L Q +L+ R + +P + +L KLI + +LK P ++ + + Sbjct: 161 LMLQAFILIGRLSFEKSPVPSNNYNYILLKNFQKLIEKNYTTLKLP---REYAELLFITP 217 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 L GM+ + +R + A+ LL + I++I+ + GF D++YF+ + + Sbjct: 218 NHLNALCNSTVGMSAGELIRNRIILEAKRLLVNKDSTITEIAYQLGFADNSYFTKFYKKY 277 Query: 267 TGMTPSQWR 275 TG TP ++R Sbjct: 278 TGQTPEEFR 286 >UniRef50_C7CJM3 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria RepID=C7CJM3_METED Length = 340 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 143 FANEMAELLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 E+A + QLVM R +++ L + L ++ +AA ++ + Sbjct: 198 LGAEIARQVAAQLVMFFKRGGGQMQFSRRGLSAPVGRSALQEVQRWVAAHPADNHSIGRL 257 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + A S R + FR +TG+T Y+ VR+ + LL+ + + ++ CGF DS+ Sbjct: 258 AERAGMSPRHFARLFRIETGLTPAAYVENVRIEAVRRLLERDDVALKQVAGACGFRDSDT 317 Query: 259 FSVVFTRETGMTPSQWRHLNSQ 280 F R G TP+++R ++Q Sbjct: 318 LRRAFVRRVGTTPAEYRRRHAQ 339 >UniRef50_B8CZL9 Response regulator receiver protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZL9_HALOH Length = 386 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 52/89 (58%) Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 +L S L++ +E + S L Q FR+ TG ++YL +R+ A+ LL+ + + +I Sbjct: 292 NLSSGLTLNQLAEEFNLSNSSLSQLFRKYTGKNFSEYLDDIRINKARELLKTTGKKVYEI 351 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRH 276 + E GF+D YFS F + TG++P+ +R Sbjct: 352 ADEIGFDDPYYFSSWFKKRTGVSPTTYRE 380 >UniRef50_C6D742 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D742_PAESJ Length = 382 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 64/111 (57%), Gaps = 3/111 (2%) Query: 171 PTSSETLLDKLITRLAASLKSPF---ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 P++S++L L+ + ++ + +L D+ + L F+ + G+T ++L + Sbjct: 272 PSASDSLNRNLVKKAVTLMEEEYDKASLHYVADKVFITPAYLSSLFKSKMGVTFIEHLTR 331 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 +R+ HA+ LL+ + L +++ G++DS YFS +F ++ G++PS++R N Sbjct: 332 IRISHAKKLLKQTHLRNYEVAERVGYQDSRYFSQIFKKKVGLSPSEFRDAN 382 >UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium RepID=A6LQ44_CLOB8 Length = 223 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 60/102 (58%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 ++++++ L +++S +L K E + SE + F++ GMTI +Y +++R+ A+ L Sbjct: 120 VINRILKHLHLNIESQISLKKLSGELNLSEGYISDCFKKHMGMTIMKYAKKIRIDRAKVL 179 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 L + I +I GF D ++F VF TG++PS++R+ N Sbjct: 180 LVTTTSSILEIGLTLGFHDQSHFHKVFKSFTGVSPSEYRNNN 221 >UniRef50_Q04C99 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04C99_LACDB Length = 280 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 62/124 (50%) Query: 152 FGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 F Q++ L++ ++ +++L D +IT +A + + + S+ L + Sbjct: 148 FFQMIALIDSEYTEKTAVTTPPNQSLADTVITYIANNSSTNITAQSIAEHFRISQVTLNK 207 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 + Q T + + +YL+QVR+ HA+YLL + ++ I+ CGF + F MTP Sbjct: 208 ELSQVTKLPLGKYLKQVRLMHARYLLLSTNYSVAYIANYCGFSSAKVLERNFKAWKKMTP 267 Query: 272 SQWR 275 SQ+R Sbjct: 268 SQYR 271 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 54/99 (54%) Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 ++ ++ T + +L+ D+ + S L ++F+ TG +Y+ VR+ +A L Sbjct: 174 IIQEVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNL 233 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L + I+DI+ ECGF DSNYF F + G++P ++R Sbjct: 234 LLETNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYR 272 >UniRef50_C7H9U4 Transcriptional regulatory protein (Fragment) n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9U4_9FIRM Length = 156 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 6/140 (4%) Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 P + ++L F L L + LPP L++ I + + + +++ + Sbjct: 5 TPRSRAASQLAFALLCELAGADS-AAPPLPP-----LVEAAIEDIRQNYAGLYGVEELSE 58 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S+ L + F G+ +YL VRV A LL H + I++ CGF +NY Sbjct: 59 RLGVSKSHLVRTFTAAVGVPPGRYLTTVRVEAAMRLLLHREYTLDVIASLCGFSGANYLC 118 Query: 261 VVFTRETGMTPSQWRHLNSQ 280 VF +ETG +P+QWR L Q Sbjct: 119 RVFKKETGQSPAQWRALAGQ 138 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 67/140 (47%) Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFAL 195 E + H P + M +++ LL R T++ ++++I + ++ Sbjct: 157 ELNSHRPLGSHMVNAYLLEMLTLLGRRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSI 216 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 E S S +F++ TGMT +Y+ ++R+ A+ LL S L + +++ G+++ Sbjct: 217 SDLAGECSLSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDN 276 Query: 256 SNYFSVVFTRETGMTPSQWR 275 YFS +F G+ PS+++ Sbjct: 277 PLYFSRIFRSTVGIPPSEYK 296 >UniRef50_C6CVN2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVN2_PAESJ Length = 259 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 19/238 (7%) Query: 41 LVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDW 100 LV+ G L+ + + + +GDL YI A + Y V K +++ Sbjct: 28 LVLASYGKALYWVGNEKIILEKGDLLYIPACQSY-YGKCVPTVFHE--------KYVIEF 78 Query: 101 QGAIPGFNASAGQPHW---RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVM 157 P HW R G+ + R I + +E ++ +A+ + + + + Sbjct: 79 TADTPPLPLLQNN-HWVKSRTGAYELILER--IKTMHNEWTEKHLYADVLGLAILYECLA 135 Query: 158 LLNRHRYTSDSLPPTSS-ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQ 216 L NR D P TS+ ++++ + + + ++ + S FR+ Sbjct: 136 LWNREL---DEGPATSAAHQQVERMKSYIMNYYQQKVTKEELGEYIRKSPNYAATLFRRV 192 Query: 217 TGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 TG TI++Y+ + RV A YLL S L + +IS G+ D +YF +F RETG TP+ + Sbjct: 193 TGQTISEYVHKARVKKAIYLLVDSTLTVGEISESVGYRDLSYFQRIFKRETGKTPTAY 250 >UniRef50_D1U5Q1 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Q1_9DELT Length = 279 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 104/255 (40%), Gaps = 13/255 (5%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS-YASVNDLV 83 RY + F H HD + ++ G VL + + RG + I H+ N ++ Sbjct: 27 RYNAEAFCRHVHDAWSVGLIEDGRTTFVLEEARHVAARGKIVVIPPGAVHACNPDPNSVM 86 Query: 84 LQNIIYCPERLKLNLDWQGA-IPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + Y L LD A + G S G P + + A ++ +L H + Sbjct: 87 AYRMFYVAPGL---LDGVAAEVFGRARSGGSPRFGTPVIDDADLYRLWRRL-HAAVATGA 142 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT---RLAASLKSPFALDKFC 199 A E LL L LL RH P + D + T LAA L +LD Sbjct: 143 DALEKQSLLMQGLAELLTRHGRLGS---PRQCGRVPDAVKTVRHHLAARLDERVSLDDLS 199 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 S L + F ++ G+ + Y Q+RV A+ LL IS ++ E GF D ++F Sbjct: 200 ALVGISRYHLLRVFSREAGLPPHAYQNQLRVVRAKVLLAQGEP-ISQVAAEVGFADQSHF 258 Query: 260 SVVFTRETGMTPSQW 274 + VF + TG TP Q+ Sbjct: 259 TRVFRQFTGATPRQY 273 >UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNA5_9CLOT Length = 282 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 74/134 (55%), Gaps = 1/134 (0%) Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 P + L F +L++ + R R + P + ++L+ +++ + + + ++ + Sbjct: 145 PGFQRLCALRFEELLLSMGRQRLRLKN-PQLAGDSLVTQVLNDMYKTYYRNYTIEDYAKR 203 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + S L ++F+Q TG + NQYL Q+R+ A+ LL+ SRL + +I++ G+E YFS Sbjct: 204 HNVSVCWLIRRFKQVTGESPNQYLIQIRIRRARELLESSRLNMGEIASVLGYESPLYFSR 263 Query: 262 VFTRETGMTPSQWR 275 F + G++P ++R Sbjct: 264 QFKQLQGVSPKRYR 277 >UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 Tax=Clostridium RepID=Q0TRX2_CLOP1 Length = 250 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 58/105 (55%) Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 T+ E ++DK+ + ++ L++ + S + F+++TG T+ Y+ + +V Sbjct: 145 TNEEKIVDKVSKYIDDNMDKMLKLEELASICNLSPGYFSRVFKKETGKTVITYINEKKVE 204 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 A+ LL+ S+ I +IS + GF+D YF VF + TG+TP +R Sbjct: 205 RAKKLLKESKDPIINISLDLGFDDCGYFIRVFKKITGLTPKAFRE 249 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/249 (21%), Positives = 112/249 (44%), Gaps = 12/249 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH + E+ V +G+GL L+++ Y + DL ++ H+ + ++ + I+ E Sbjct: 50 HTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFEYIVMGIEG 109 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 + + G + + ++ + + ++ +++ + +++ + E+L Sbjct: 110 VTYFSKEEDEEQGCSIAN---YYEYKHEVLFYLKTILFEVKTKDTEYQSLCQNLLEVL-- 164 Query: 154 QLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 L+ L+ R S P + L++K I A K LD + ++ + Sbjct: 165 -LINLMRRANINLKSSPINKANKDCVLIEKYID---AHFKEDITLDTLSELTFLNKYHIV 220 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 F+Q G++ Y+ Q R+ A+ LL + L IS+I+ GF +YF+ F + T + Sbjct: 221 HAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTS 280 Query: 271 PSQWRHLNS 279 P Q+R NS Sbjct: 281 PLQYRKDNS 289 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 57/110 (51%) Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 TS +D+L+ + P L + + L F G ++YL ++R+ Sbjct: 410 TSVNPNMDRLLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGEGFSEYLNKIRLE 469 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 A LL + L IS+IS G+ D +YF+ VF ++TG++PSQ+R N+++ Sbjct: 470 KAMELLLTTELTISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQNARE 519 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 46/84 (54%) Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P + S S L + FRQQ MT+ Y+ VRV A+++L+ +++++ C Sbjct: 215 PITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLKKYNFKLNEVALRC 274 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 GF+D NYF VF TG TP+ +R Sbjct: 275 GFKDVNYFCRVFKNRTGRTPTDYR 298 >UniRef50_C6CWB0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWB0_PAESJ Length = 530 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 57/103 (55%) Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 +++ ++++ +A P ++ E S +R F+++TG TI YL ++R+ HA Sbjct: 426 QSVAEQIMKLIAERYHLPLTVEDIAKEVYLSPNYVRTIFKEKTGETILDYLTRIRMNHAA 485 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LL+ L + DI+ +E+ +YF VF + G TP+++R L Sbjct: 486 ELLKDRALKVRDIAHRVSYENVSYFCSVFQKHKGSTPNEYRKL 528 >UniRef50_Q1YTA5 Putative AraC family transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTA5_9GAMM Length = 326 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 171 PTSSETLLDKLITR----LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLR 226 P S + +K + R L +L P + D+ D + S+R L + F +TG ++ ++ R Sbjct: 217 PASDYQVKNKSVARALLLLEQNLSRPLSTDEIADRLNISKRQLERLFIAETGDSLQKFYR 276 Query: 227 QVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 ++R+ + +LLQ+++ LI+DI+ E GF D+ +FS F P+Q R Sbjct: 277 KIRLNYGLWLLQNTQRLITDIAQETGFSDTAHFSRAFRAAFDKKPTQCRE 326 >UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI Length = 263 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 +P SE L++ +IT + L SP + + SER L + F+++TG TI Q+++ V Sbjct: 151 VPAPESEVLME-IITYIQKHLNSPSDFQQLAQRFNLSERTLSRWFKKETGSTIFQFVKSV 209 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 RV A L++ S + I +I+ G+ + FS VF G +P +++ Sbjct: 210 RVQKALELIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQEYK 256 >UniRef50_B4CX13 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX13_9BACT Length = 299 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 +C E + G + FN G+P L A+ +I Q+E E Q A+ Sbjct: 96 FFCIETYHEEVGCNGVL--FNDLYGRPVIALDDPRSAEFASLIAQMEKEL-QTAGLAH-- 150 Query: 148 AELLFGQLVMLL---NRHRYT----SDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 +E+L L + L RH+ + + P T +LD+L + + + Sbjct: 151 SEILLSYLKVFLIKATRHKIEQQECTTAAPNTRPPAVLDRLTALIEEHYPHAHSPADYAA 210 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S + L + + Q G T+ +R+ + HA++ L H+R + I+ E GF+D YFS Sbjct: 211 WLHLSPKALGKIVKSQLGKTLTTLIRERILKHAKWQLLHTRKPVKGIAAEVGFDDELYFS 270 Query: 261 VVFTRETGMTPSQWRHLNS 279 +F R TG +PS +R + Sbjct: 271 RLFKRGTGFSPSAFREFET 289 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 12/253 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV--LQNIIYCP 91 H HD E VIV G L + Y + +G+ +I+A H+ S N + L +I + P Sbjct: 42 HWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSITFHP 101 Query: 92 ERLKLNLD---WQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH--ESSQHVPFANE 146 + ++D W + + H L S A ++ +E S + PF E Sbjct: 102 RLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDS-SEAWHKEATHAIESAWNSCANEPFGYE 160 Query: 147 M-AELLFGQLVMLLNRHRYTSDSLPPTS---SETLLDKLITRLAASLKSPFALDKFCDEA 202 QL++ L+ + P + L ++ + + D A Sbjct: 161 FQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIADTA 220 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 SE + FR G+ QYL+Q R+ A L + I+ I +CGF+D++YF Sbjct: 221 MISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVKT 280 Query: 263 FTRETGMTPSQWR 275 F + TPS++R Sbjct: 281 FREQKKCTPSEYR 293 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16... 337 2e-91 UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax... 303 5e-81 UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax... 284 3e-75 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 274 2e-72 UniRef50_B2N4J2 HTH-type transcriptional activator RhaR n=2 Tax=... 267 3e-70 UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=... 257 5e-67 UniRef50_UPI000197C3B0 transcriptional regulator, AraC family pr... 251 2e-65 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 246 8e-64 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 244 2e-63 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 240 5e-62 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 237 3e-61 UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=T... 234 3e-60 UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=... 233 3e-60 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 225 2e-57 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 220 5e-56 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 219 8e-56 UniRef50_C6DJR4 HTH-type transcriptional activator rhaS n=40 Tax... 218 2e-55 UniRef50_A6AXJ0 HTH-type transcriptional activator RhaS n=2 Tax=... 218 2e-55 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 216 8e-55 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 213 6e-54 UniRef50_UPI000197C3AF transcriptional activator RhaS n=1 Tax=Pr... 213 7e-54 UniRef50_C6C3E6 Transcriptional regulator, AraC family n=8 Tax=E... 212 1e-53 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 212 2e-53 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 211 2e-53 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 211 2e-53 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 211 2e-53 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 210 3e-53 UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=V... 210 4e-53 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 208 1e-52 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 208 2e-52 UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=... 205 9e-52 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 204 3e-51 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 204 3e-51 UniRef50_Q65Q31 HTH-type transcriptional activator rhaS n=1 Tax=... 203 4e-51 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 203 5e-51 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 203 7e-51 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 202 1e-50 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 201 2e-50 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 201 2e-50 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 201 3e-50 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 201 3e-50 UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Kle... 200 4e-50 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 200 5e-50 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 200 5e-50 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 199 1e-49 UniRef50_C4LCV2 Transcriptional regulator, AraC family n=1 Tax=T... 198 2e-49 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 198 2e-49 UniRef50_C0AEA5 L-rhamnose operon transcriptional activator (Fra... 197 5e-49 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 195 2e-48 UniRef50_Q1ZN25 L-rhamnose operon regulatory protein n=2 Tax=Vib... 194 3e-48 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 193 4e-48 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 193 5e-48 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 193 8e-48 UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=V... 192 9e-48 UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Pae... 192 1e-47 UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=C... 192 1e-47 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 192 2e-47 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 192 2e-47 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 191 2e-47 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 191 2e-47 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 191 3e-47 UniRef50_B5HDN5 Predicted protein n=4 Tax=Actinomycetales RepID=... 191 3e-47 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 190 3e-47 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 190 4e-47 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 190 4e-47 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 190 6e-47 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 189 8e-47 UniRef50_Q7MG26 AraC-type DNA-binding domain-containing protein ... 189 1e-46 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 188 1e-46 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 188 1e-46 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 188 2e-46 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 188 2e-46 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 187 4e-46 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 187 4e-46 UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Cl... 186 8e-46 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 185 2e-45 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 185 2e-45 UniRef50_C6BWQ4 Transcriptional regulator, AraC family n=1 Tax=D... 185 2e-45 UniRef50_D2PMT4 Transcriptional regulator, AraC family n=1 Tax=K... 184 2e-45 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 184 3e-45 UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=E... 184 3e-45 UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaeros... 183 5e-45 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 182 1e-44 UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium el... 182 1e-44 UniRef50_UPI0001C35DF5 transcriptional regulator, AraC family pr... 181 1e-44 UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronoba... 181 2e-44 UniRef50_D1CHN4 Transcriptional regulator, AraC family n=1 Tax=T... 180 5e-44 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 180 5e-44 UniRef50_D1N111 Transcriptional regulator, AraC family n=1 Tax=V... 180 6e-44 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 180 6e-44 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 179 7e-44 UniRef50_C7PEC1 Transcriptional regulator, AraC family n=1 Tax=C... 179 8e-44 UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=A... 179 1e-43 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 179 1e-43 UniRef50_Q5WKX6 Putative uncharacterized protein n=1 Tax=Bacillu... 178 1e-43 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 178 1e-43 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 178 2e-43 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 178 2e-43 UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=... 178 2e-43 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 178 2e-43 UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 T... 178 2e-43 UniRef50_C0CZ81 Putative uncharacterized protein n=1 Tax=Clostri... 178 3e-43 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 177 3e-43 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 177 3e-43 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 177 3e-43 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 177 3e-43 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 177 4e-43 UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=P... 176 5e-43 UniRef50_D2B8S3 Transcriptional regulator containing an amidase ... 176 6e-43 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 176 8e-43 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 176 1e-42 UniRef50_P54722 Uncharacterized HTH-type transcriptional regulat... 175 1e-42 UniRef50_A9E084 Transcriptional regulatory protein, AraC-type n=... 175 2e-42 UniRef50_B8I029 Transcriptional regulator, AraC family n=2 Tax=C... 175 2e-42 UniRef50_A1A066 Transcriptional regulator n=5 Tax=Bifidobacteriu... 175 2e-42 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 174 2e-42 UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostri... 174 2e-42 UniRef50_A8U727 YfiF n=1 Tax=Carnobacterium sp. AT7 RepID=A8U727... 174 2e-42 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 174 3e-42 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 174 4e-42 UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=... 174 4e-42 UniRef50_Q6MJ67 Putative transcriptional regulator n=1 Tax=Bdell... 173 4e-42 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 173 4e-42 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 173 5e-42 UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostri... 173 6e-42 UniRef50_D2QTR3 Transcriptional regulator, AraC family n=1 Tax=S... 173 8e-42 UniRef50_D1N3N0 Transcriptional regulator, AraC family n=1 Tax=V... 172 1e-41 UniRef50_A5W5M8 Transcriptional regulator, AraC family n=15 Tax=... 172 1e-41 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 172 1e-41 UniRef50_C6D075 Transcriptional regulator, AraC family n=1 Tax=P... 171 2e-41 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 171 2e-41 UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=P... 171 2e-41 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 171 2e-41 UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus ... 171 2e-41 UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostri... 171 2e-41 UniRef50_A3HVZ7 Transcriptional regulator n=1 Tax=Algoriphagus s... 171 2e-41 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 170 4e-41 UniRef50_C0YSE7 AraC family transcriptional regulator n=1 Tax=Ch... 170 7e-41 UniRef50_D1U5Q1 Transcriptional regulator, AraC family n=1 Tax=D... 170 7e-41 UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=S... 169 7e-41 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 169 8e-41 UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID... 169 1e-40 UniRef50_D2QLM0 Transcriptional regulator, AraC family n=1 Tax=S... 168 1e-40 UniRef50_B1KR44 Transcriptional regulator, AraC family n=2 Tax=A... 168 2e-40 UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibr... 168 2e-40 UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus c... 168 2e-40 UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaeros... 168 2e-40 UniRef50_B2JDH4 Transcriptional regulator, AraC family n=33 Tax=... 168 2e-40 UniRef50_UPI0001787F68 transcriptional regulator, AraC family n=... 168 3e-40 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 167 3e-40 Sequences not found previously or not previously below threshold: UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 194 2e-48 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 192 1e-47 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 190 4e-47 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 189 7e-47 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 188 1e-46 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 188 2e-46 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 188 3e-46 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 187 6e-46 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 184 3e-45 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 183 5e-45 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 183 5e-45 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 183 6e-45 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 183 7e-45 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 183 7e-45 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 182 9e-45 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 182 1e-44 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 182 1e-44 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 181 2e-44 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 181 2e-44 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 181 2e-44 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 180 4e-44 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 180 4e-44 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 180 5e-44 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 180 6e-44 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 178 1e-43 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 178 2e-43 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 178 2e-43 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 177 3e-43 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 177 3e-43 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 177 4e-43 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 177 4e-43 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 176 5e-43 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 176 5e-43 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 176 6e-43 UniRef50_UPI0001788C94 transcriptional regulator, AraC family n=... 176 6e-43 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 176 1e-42 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 176 1e-42 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 175 1e-42 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 175 1e-42 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 175 2e-42 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 173 4e-42 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 173 5e-42 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 173 5e-42 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 173 6e-42 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 173 7e-42 UniRef50_Q11X77 Transcriptional regulator, AraC family n=1 Tax=C... 173 8e-42 UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=P... 172 9e-42 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 172 1e-41 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 172 1e-41 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 172 1e-41 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 172 1e-41 UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabac... 172 1e-41 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 172 1e-41 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 171 2e-41 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 171 2e-41 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 171 2e-41 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 171 2e-41 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 171 2e-41 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 171 2e-41 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 171 2e-41 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 171 2e-41 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 171 2e-41 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 171 2e-41 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 171 2e-41 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 171 3e-41 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 171 3e-41 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 171 3e-41 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 171 3e-41 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 171 3e-41 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 171 3e-41 UniRef50_UPI0001744EC9 transcriptional regulator, AraC family pr... 170 4e-41 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 170 4e-41 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 170 4e-41 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 170 5e-41 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 170 6e-41 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 170 6e-41 UniRef50_C6D1V9 Transcriptional regulator, AraC family n=1 Tax=P... 170 6e-41 UniRef50_C7PJ33 Transcriptional regulator, AraC family n=1 Tax=C... 170 6e-41 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 170 7e-41 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 170 7e-41 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 169 8e-41 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 169 1e-40 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 169 1e-40 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 169 1e-40 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 169 1e-40 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 169 1e-40 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 168 1e-40 UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostri... 168 1e-40 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 168 1e-40 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 168 2e-40 UniRef50_UPI0001C36187 helix-turn-helix domain-containing protei... 168 2e-40 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 168 2e-40 UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=... 168 2e-40 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 168 2e-40 UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=C... 168 2e-40 UniRef50_D1PSQ0 AraC-type sugar metabolism regulator n=1 Tax=Sub... 168 2e-40 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 167 3e-40 UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=P... 167 3e-40 >UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16 Tax=Enterobacteriaceae RepID=C0Q3L5_SALPC Length = 322 Score = 337 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 217/271 (80%), Positives = 236/271 (87%) Query: 12 FFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 FF +QQAV VADRYPQDVFAEHTH+FCELV+VWRGNGLHVLN+RPYRITRGDLFYI A+ Sbjct: 52 FFTDEQQAVTVADRYPQDVFAEHTHEFCELVMVWRGNGLHVLNERPYRITRGDLFYIRAE 111 Query: 72 DKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 DKHSY SVNDLVLQNIIYCPERLKLN++WQ IPGF + PHWRLGSMGM QARQVI Sbjct: 112 DKHSYTSVNDLVLQNIIYCPERLKLNVNWQAMIPGFQGAQWHPHWRLGSMGMNQARQVIN 171 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKS 191 QLEHES+ P ANEMAELLFGQLVM L RHRY +D LP TS ETLLDKLIT LA SL+ Sbjct: 172 QLEHESNGRDPLANEMAELLFGQLVMTLKRHRYATDDLPTTSRETLLDKLITALANSLEC 231 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 PFALD FC + CSERVLRQQFR QTGMTINQYLRQVR+CHAQYLLQHS L++S+IS +C Sbjct: 232 PFALDAFCQQEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQC 291 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 GFEDSNYFSVVFTRETGMTPSQWRHL++Q D Sbjct: 292 GFEDSNYFSVVFTRETGMTPSQWRHLSNQSD 322 >UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax=Enterobacteriaceae RepID=RHAR_ENTS8 Length = 283 Score = 303 bits (776), Expect = 5e-81, Method: Composition-based stats. Identities = 176/277 (63%), Positives = 201/277 (72%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 MA QL L K DFFA+ Q V VADRYPQ+VFAEHTH+FCELV+VWRGNGLHVLNDRPYRI Sbjct: 1 MASQLVLRKADFFATPTQPVVVADRYPQNVFAEHTHEFCELVLVWRGNGLHVLNDRPYRI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GDLFYI A+D+HSY SVNDLVL NIIYCPERL+LN++W+ + G P WRL S Sbjct: 61 TCGDLFYIRAEDRHSYQSVNDLVLHNIIYCPERLQLNVNWRDLLENPRGVNGDPRWRLSS 120 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 GM QARQVI QLEHES + ++ +AE LF QL + L RHRY LD Sbjct: 121 QGMVQARQVIDQLEHESPKQDALSHCLAESLFLQLAITLRRHRYQPSGGTGPGEGETLDL 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L+ L SL PF L FC +ER LRQ FRQQTGMTI+QYLRQ+R+C AQYLL+HS Sbjct: 181 LMAALGNSLDVPFDLQHFCSHYQIAERPLRQLFRQQTGMTISQYLRQLRICQAQYLLRHS 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LLIS+I+ CGFEDSNYFSVVFTRETG+TP WR Sbjct: 241 SLLISEIAARCGFEDSNYFSVVFTRETGVTPRVWRQQ 277 >UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax=Enterobacteriaceae RepID=RHAR_YERP3 Length = 290 Score = 284 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 148/276 (53%), Positives = 184/276 (66%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M L L D+ S+Q VAV +RYPQ+ F EHTH FCE+VIVWRGNGLHVLND PYRI Sbjct: 1 MRAPLLLESRDYLLSEQMPVAVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GD+FYI A D HSY SV+DLVL NIIYCPERL LN W +P Q +WRL + Sbjct: 61 TCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTT 120 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 GMAQAR +I QL ES + ++ ++ E+L QL ++L RHRY ++ LD Sbjct: 121 QGMAQARPIIQQLAQESRKTDSWSIQLTEVLLLQLAIVLKRHRYRAEHAHLLPDGEQLDL 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 +++ L SL + F + FC + ER L+Q FRQQTGM+I+ YLRQ+R+CHA+ LL+ S Sbjct: 181 IMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGS 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 ISDI+ CGFEDSNYFS VFTRE GMTP +R Sbjct: 241 EHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQ 276 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 129/275 (46%), Positives = 177/275 (64%), Gaps = 1/275 (0%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 + LKL +D+F +++ AV VA+R PQ F H HDF ELVIVWRGNGLH+ ND PYRIT Sbjct: 3 SRGLKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYRIT 62 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSM 121 GDLFY+ ADD+HSY SV+ L L NI+Y RL L DWQ +P + Q +WRLG Sbjct: 63 CGDLFYVTADDRHSYESVHALELDNILYIRPRLTLPTDWQNLLPDGGVAQQQRYWRLGEQ 122 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 GMA R + L E + P + +++E+L Q+ +L R+R+ + LD L Sbjct: 123 GMAIIRDRVESLTQECMKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ-LDLL 181 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + L S+ PF L+ FC + S R LR +F+QQTGM+++QYLRQ+R+C A LL++ R Sbjct: 182 MNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELLRYDR 241 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 IS+++ +CGF+DSNYFSVVF + G+TPS +R Sbjct: 242 QTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQ 276 >UniRef50_B2N4J2 HTH-type transcriptional activator RhaR n=2 Tax=Enterobacteriaceae RepID=B2N4J2_ECOLX Length = 199 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 198/199 (99%), Positives = 199/199 (100%) Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 +QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF Sbjct: 1 MQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 60 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS Sbjct: 61 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 120 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF Sbjct: 121 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 180 Query: 264 TRETGMTPSQWRHLNSQKD 282 TRETGMTPSQWRHLNSQKD Sbjct: 181 TRETGMTPSQWRHLNSQKD 199 >UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=Pectobacterium RepID=RHAR_PECCP Length = 284 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 130/272 (47%), Positives = 178/272 (65%), Gaps = 1/272 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 LKL +D+F +D+ V VA+R+PQ VF H HDF ELVIVWRGNGLH+ ND PYRITRGD Sbjct: 8 LKLQTEDYFLTDKNVVMVAERHPQPVFPLHHHDFDELVIVWRGNGLHLWNDVPYRITRGD 67 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 +FY+ A+D+HSY SV+ L L NI+Y RL L+ DWQ +PG Q HW LGS GM Sbjct: 68 MFYVSANDRHSYESVHGLELDNILYIRNRLTLSADWQRLLPGGEHPQSQRHWCLGSEGMD 127 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 R+ + L E + + +++E L Q+ +L R+R+T D+ P + LD L+ Sbjct: 128 TLREKVDALRQECMKSDALSLQLSEALLLQIALLAARYRHTPDN-PQLADAHQLDMLMNA 186 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L AS+ +PF + FC++ S R LR +F++QTGM++ YLRQ+R+C A LL++ I Sbjct: 187 LRASIAAPFRFEAFCEQHHFSARSLRSRFKEQTGMSVPHYLRQLRLCKAMELLRYDLQTI 246 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 DI+ CGFEDSNYFSVVF + G++PS +R Sbjct: 247 GDIAALCGFEDSNYFSVVFHQAFGVSPSAYRQ 278 >UniRef50_UPI000197C3B0 transcriptional regulator, AraC family protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3B0 Length = 285 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 104/282 (36%), Positives = 158/282 (56%), Gaps = 1/282 (0%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 + L + D+F + V + R Q+ F H+H+F E VIV+ GNGLH N Y I Sbjct: 2 IQSILSINSSDYFIRPENTVTIEMRDSQEDFIVHSHNFNEFVIVFSGNGLHHWNGIDYPI 61 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GDLFYI+A+D H Y SVN+L L N++Y P + + +P HW+L Sbjct: 62 TCGDLFYINAEDCHGYHSVNNLKLVNVLYKPNEFFIKKSIEKYVPLSYQPITSRHWKLPP 121 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 ++ +I ++ E + + + E LF QL + + R RY D P + +D+ Sbjct: 122 SSLSTLTPIIEKMALECQKPDIPSIHLCEGLFLQLAIYIYRLRYQPDQAPISLLHQ-MDQ 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 LI L S+ + F+L+KF E S R L++ F+ +TGMT+ +YL+Q+R+C A LL+ + Sbjct: 181 LINCLNLSINTSFSLEKFAQEHQMSARSLQRLFKSKTGMTVMEYLQQLRLCQAALLLRST 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 L IS+++ +CG+EDSNYFS VF ++ MT S +R QKD Sbjct: 241 SLSISEVAGQCGYEDSNYFSSVFHKKMKMTASAYRCCFLQKD 282 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 93/270 (34%), Positives = 150/270 (55%), Gaps = 4/270 (1%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 +L +DFF + V R PQ+ F EH+HDF EL+IV +G G H+LND P + + + Sbjct: 3 QLNCNDFFNNSDATVCTEVRAPQEDFPEHSHDFHELMIVTKGAGQHILNDVPINLAQNYI 62 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 YI D+H + ++L L NI++ +L + + +P S Q W + + M + Sbjct: 63 CYISPKDRHLFEQSDNLHLTNILFQKNKLAYSPLLKSVLPK--ESDAQQSWYISTETMKK 120 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 ++ Q+EHESS H + M E LF QLV+ ++R R TS S +S+ + K+I + Sbjct: 121 VCTLMAQIEHESSLHSVESRLMTEALFQQLVVEISRGRLTSQS--NNASDNSILKIIDWI 178 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + F + D+ S R L ++ +Q T ++ N Y+ +VR+ HA LL +S L ++ Sbjct: 179 QNNYAEEFNVGDISDQFEISSRTLSRRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVT 238 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 DI+ + G++DSNYFS F R T TP+++R Sbjct: 239 DIAFQVGYKDSNYFSTKFKRFTNKTPTEFR 268 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 4/271 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L DFF S +V + R PQ F EH HDF E+VIV G G HV N +PY ++ G + Sbjct: 15 LQGIDFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHVFNGQPYTLSGGSVC 74 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ D+H Y +L L N++Y P+ + +P HWR+ + Q Sbjct: 75 FVRDHDRHLYEHTENLCLTNVLYRSPQAFSFLSGLEKLLPQEQDGHYPSHWRVSQQTLHQ 134 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 A ++ +LE A E+LF QL++LL R S ++ L++LI L Sbjct: 135 ASPLVERLEALRECSDVHAVASMEMLFMQLLILL---RSGSQMQGGGHADERLNQLIAWL 191 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 ++ D+ S R L +Q +Q+TG+T +YL ++R+ A+YLL+HS ++ Sbjct: 192 EDHYAEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMKARYLLRHSEESVT 251 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 DI+ +CGF DSN+FS +F RE +P R Sbjct: 252 DIAYQCGFGDSNHFSTLFRREFSWSPRDIRQ 282 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 4/271 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L DFF S +VA+ R PQ F EH HDF E+VIV G G+HV N +PY IT G + Sbjct: 4 LHSVDFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVC 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ D+H Y ++L L N++Y P+R + +P HWR+ + Q Sbjct: 64 FVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSVLQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 RQ++ Q+E + ++ + E+LF Q LL R +S +S + L+ L+ L Sbjct: 124 VRQLVAQMEQQEGENDLPSTASREILFMQ---LLLLLRKSSLQENLENSASRLNLLLAWL 180 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 D D+ S S R L +Q +QQTG+T +YL ++R+ A++LL+HS ++ Sbjct: 181 EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT 240 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 DI+ CGF DSN+FS +F RE +P R Sbjct: 241 DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQ 271 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 12/284 (4%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L K+D+F D + V R PQ+ F H H+F E+VI+ G G+H+ + Y + GD F Sbjct: 8 LKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTF 67 Query: 67 YIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNA-SAGQPHWR-------- 117 I D H Y +++ L L NI++ P L L++ ++ G++A +P WR Sbjct: 68 VIGGDRPHDYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSR 127 Query: 118 --LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 L + + + + L+ E Q MA L QLV L+R Y P + Sbjct: 128 LQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRC-YIRTRNPESKKL 186 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + + I+ + P +LD + + S R + F + +YL QVR+ A Sbjct: 187 LRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASR 246 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 LL+ + I+DI+ + GF DSNYFS F G++P ++R Sbjct: 247 LLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV7_TOLAT Length = 275 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 3/275 (1%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 KL +FF +++ + V R PQ+ F EH HDF ELV+V G G+HV + R ++RG + Sbjct: 3 KLNHAEFFDNNKV-INVLPRLPQEPFPEHCHDFHELVLVKSGCGIHVCDGRAIHVSRGSV 61 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 Y+ +D H + +++L L N+++ P+ + + + + + Q Sbjct: 62 IYLKDEDVHCFDHMDNLCLTNVLFMPDEFHSSPHLTSLLTE-SCRSDSGQMMVCPQIQQQ 120 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 A ++ Q+ E+ + +++ M E LF QL +LL R R + + L++ LI + Sbjct: 121 AELLLTQIHDENDRQDAYSSLMVETLFSQLAVLLWRDRQLNKKYRSEEQDNLIN-LINYI 179 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + ++ + D + R L ++ ++ TG+T N YL +VR+CHA YLL HS+ ++ Sbjct: 180 NENYQNELNWSELSDSFNIPLRTLNRKLQEHTGLTPNNYLGRVRLCHASYLLSHSQDAVT 239 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 DI+ CGF DSNYFS F + +TP Q+R Sbjct: 240 DIAFSCGFNDSNYFSSKFHQAFNVTPMQYRKRYRN 274 >UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAR_MANSM Length = 276 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 156/281 (55%), Gaps = 5/281 (1%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M L+L +F S++ + V R+ Q F H HDF E+VI+ GNG+H ND + I Sbjct: 1 MTDILQLSHHSYFISEESPITVERRHYQPPFPLHRHDFNEIVIISAGNGIHFWNDEIHPI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T G++ YI + DKH Y V+ L L NI+Y PE+L L + IP N + R+ Sbjct: 61 TTGNVLYIESGDKHKYGEVDKLKLDNILYRPEKLSLFPIMKDYIPHNNE---KKSLRINQ 117 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + Q + +I QLE ES + + ++E +F Q+++L+ R + + S + L+ Sbjct: 118 ETLVQLQSLISQLEIESKKTNKSSMHLSEAIFLQILILICRTQQQENK--AYSDISKLES 175 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L + L S+ F L FC + + +R+ F+QQT MTI QYL+++R+C A LL+++ Sbjct: 176 LFSALNQSISQEFYLADFCRQHQLAVSSVRRIFKQQTNMTIAQYLQKLRLCRAATLLRNT 235 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 +++I+ CG+ DSNYFS VF + TP+++R +K Sbjct: 236 SESVANIAIRCGYSDSNYFSSVFGKTFSCTPTEYRSRFIKK 276 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 20/295 (6%) Query: 1 MAHQLKLLKDDFFASDQQAVAVAD--------RYPQDVFAEHTHDFCELVIVWRGNGLHV 52 M + + +F+ VAV H HDF ELVI+ GNG+ V Sbjct: 1 MELVFQAKSEFYFSDPDCPVAVKRVAASNAAQHLHDLTTEPHRHDFAELVIITAGNGVQV 60 Query: 53 LNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFN---- 108 ++ Y ++ GD+F I + H + N + + N++Y P RL L W +PG+N Sbjct: 61 VDGGEYAVSLGDVFLIQGNGAHYFLERNRVSMINVLYDPARLPLPFGWLRRLPGYNVIFE 120 Query: 109 -------ASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR 161 A + H +L + +A+A +++G+LE E Q P A A +L++ ++R Sbjct: 121 LEPSVRSAETFKHHLKLSAAELAEAVEIVGKLERELEQDTPGAELAAFQRLLELIVFISR 180 Query: 162 HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTI 221 Y + ++ + ++I+ L + + L++ A+ S L + FR TG + Sbjct: 181 C-YDAPPAENLAAVMRVGRIISLLESEFMREWRLEELAKLAATSPNNLLRLFRTVTGTSP 239 Query: 222 NQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 YL +VR+ A L+++ +++I+ +CGF DSNYF+ F G++P ++R Sbjct: 240 VDYLIRVRLRRAAEALKNTPGAVAEIAADCGFADSNYFARKFRAAYGVSPREFRK 294 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 140/290 (48%), Gaps = 22/290 (7%) Query: 11 DFFASDQQAVAVAD---------RYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRI 60 D+F +D V V +P DV EH HDFCEL +V G G+HVL + + Sbjct: 9 DYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGESFHV 68 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--------- 111 + GD+F + H + L L N++Y PERL L L +PG++A Sbjct: 69 STGDVFVLQGRQVHCFRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEPTFRST 128 Query: 112 --GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 RL + A ++ ++E+ES + L +L++LL+RH SD+ Sbjct: 129 HRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYAQSDT- 187 Query: 170 PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + + + +L++ L P+ L++ ++A S L + FRQ TG + +L +R Sbjct: 188 RESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFLIGLR 247 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 + A+ LL+ S L +++I+ ECGF D N+F F + G+TPS +R Sbjct: 248 IEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 14/288 (4%) Query: 5 LKLLKDDFFASD-QQAVAVADRYPQDVFAEH-THDFCELVIVWRGNGLHVLNDRPYRITR 62 ++ + +F D + + D EH HDF ELVIV G H++N + I + Sbjct: 1 MEYMYLHYFTQDPSFPFFIQYGFHDDAMPEHFHHDFFELVIVLNGTATHIVNSEEFFIKK 60 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNA-SAGQPHWR---- 117 GD+F + D H Y ++ + NI+Y PERL + PG+ A +P +R Sbjct: 61 GDVFVFNMDLSHGYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYS 120 Query: 118 ------LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 L + ++ ++ E + M F ++V+ L+R Y ++ Sbjct: 121 FSNTLSLSISSLEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQ-YIIENKLL 179 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + L K I L + +P L+K DEA S R + F++ G T + +RV Sbjct: 180 HDTFVHLAKAILFLEDNYLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVN 239 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 HA LL++S L I+DI+ E GF DSNYFS F + TG+TP ++R Sbjct: 240 HACSLLKNSNLCIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_C6DJR4 HTH-type transcriptional activator rhaS n=40 Tax=Enterobacteriaceae RepID=RHAS_PECCP Length = 279 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 3/272 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L DDFF S VAV R PQ F EH HDF E+V+V +G G+HV ND+PY + G +F Sbjct: 4 LRGDDFFTSRAVTVAVEPRTPQTAFPEHYHDFWEIVLVEQGAGVHVFNDQPYALCSGSVF 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ +D+H + V L L N++Y P + D +P Q W++ + GM Q Sbjct: 64 FVRDNDRHLFEDVEGLCLTNMLYRSPRGFRFLSDIAAFLPYGPNGEWQGQWQVNAAGMQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 +Q + L + P A +E LF +++ L + + + S S + L+ L Sbjct: 124 LKQSLNSLAELAQSDAPEAIAASESLFLHILVQLRQQCFQTQS--SGSERQGVQALLGWL 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + D S R L +Q +Q TGMT +YL ++R+ A+ LQ S I+ Sbjct: 182 QNNYSEEVNWGSLADRFSLPLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+ CGF DSN+FS F + P RH Sbjct: 242 TIAHACGFSDSNHFSTQFRKAFSQAPKSLRHQ 273 >UniRef50_A6AXJ0 HTH-type transcriptional activator RhaS n=2 Tax=Vibrionaceae RepID=A6AXJ0_VIBPA Length = 278 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 4/269 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L ++FF S + +A R PQ+ + EH+H F EL++V G+G HV+ND P +++ + Sbjct: 4 LKPNEFFVSSEIPIATELRSPQEPYPEHSHAFEELMLVSGGSGTHVINDIPMNLSKNYVC 63 Query: 67 YIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 +I +D+H + +V L L N+++ ++ ++ IP + W + A Sbjct: 64 FIKREDRHLFENVEGLHLSNVLFDQSKMAVDSSIAKYIP--DTDQQSRGWFINDQSSETA 121 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLA 186 ++I +L+ E + + + LF L++ L+R R S L S E + ++ L Sbjct: 122 NRLITRLDSEIGTDTFESKIVCQSLFNLLLVELSRGRIYS--LEGESDEDKVLSVMGYLH 179 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 + F L ++A S + L + + TGM+ YL +R+ A L++S I+D Sbjct: 180 QNYAEQFNLQDLAEQAGISTKQLSKILSRLTGMSYPNYLNHIRMSKALEALKYSDRSITD 239 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I+ + G++DSNYFS F + TP + R Sbjct: 240 IAFDVGYQDSNYFSSKFKKVFNATPREVR 268 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 9/276 (3%) Query: 8 LKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFY 67 L D F + + + ++HTHDF E+ V G+G H + D+ I RGDLF Sbjct: 8 LSGDIFFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFV 67 Query: 68 IHADDKHSYA---SVNDLVLQNIIYC----PERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 I H + N LV+ N I+ + + + S+ W Sbjct: 68 IPIGTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQ 127 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + ++ + E + P + Q++ +L R Y D ++ +D Sbjct: 128 DKFDKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQR--YECDGSMVSTPTNNMDD 185 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 I + + + + + + S ++ F++ TG+T Q+L+ +RV LL+ + Sbjct: 186 AIQYINDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKST 245 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 + I + + + G++D +F +F ++TG+TP ++R Sbjct: 246 EISIQEAANQVGYQDMKFFHSLFRKKTGVTPREYRR 281 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 1/273 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++L + + S +AV H HD ELV + RG GL +ND Y + RGD Sbjct: 1 MELYHLNDYCSPDLPLAVWPVQKAGAIGLHRHDCFELVFITRGTGLCRINDLSYPVLRGD 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 ++ ++ D H Y + NI++ E L+ + + + + ++L + Sbjct: 61 VYILNPHDTHCYEMASSCTFYNILFRRELLQHEPALTPLLDDWESRTDRKLYQLENDETD 120 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 ++ E + +P LF ++ L R +PP + K+ Sbjct: 121 AEEFRFQEIIVELKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSA-SKVFEY 179 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + A L S +L + A S FRQ TG ++ ++ +R+ A+ LL+ +L I Sbjct: 180 INAHLGSTISLRELAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTI 239 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +I+ GF D+ +FS VF ++TG++P ++R L Sbjct: 240 GEIALRLGFYDTCHFSRVFRKKTGLSPREYRQL 272 >UniRef50_UPI000197C3AF transcriptional activator RhaS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3AF Length = 269 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 136/275 (49%), Gaps = 6/275 (2%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +KL +DFF + QQ + V R PQ +F EHTHDF E+ +V +G GLHVLN RPY + G Sbjct: 1 MKLYSEDFFITPQQHITVEPRVPQPIFPEHTHDFSEIFLVTQGIGLHVLNGRPYTLCPGM 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 + YI + D H + +V++L L N++Y + L+ +A HW L Sbjct: 61 VCYIKSCDYHLFDNVSNLNLTNVLYRSDSSFTYLNNISHFFPTDAERNISHWLLNKEHYN 120 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 +A+Q+I +L + + E LF QL++ L RY + ++E + +++ Sbjct: 121 KAQQIIDKLNESDGSDLAY----TESLFLQLIVNLQDGRYN--HIGEGNNEQRIIQMLRW 174 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L + + S S R + + G++ YL ++R+ A Y ++ S I Sbjct: 175 LNMNFIEDVDWGHLTTQFSVSLRTFHRYMKNNLGISPQNYLIKLRLSEAYYQIRFSDKTI 234 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +DI+ E GF DS YFS F E TP RH ++ Sbjct: 235 TDIALESGFNDSAYFSTCFKSEYNFTPRDLRHCSN 269 >UniRef50_C6C3E6 Transcriptional regulator, AraC family n=8 Tax=Enterobacteriaceae RepID=C6C3E6_DICDC Length = 281 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 3/277 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L D+FF S VAV R PQ F EH HDF E+V+V +G G+HV ND+PY + G +F Sbjct: 4 LHGDEFFVSQATTVAVEPRMPQSAFPEHYHDFWEIVVVDQGAGVHVFNDQPYVLCSGAVF 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ +D+H + V +L L N++Y P + D +P W++ + Q Sbjct: 64 FVRDNDRHLFEQVEELHLTNVLYRSPRGFRFLSDIAPFLPYGPNGEWLGQWQVNNGTRQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 +Q+I QL ++ P +E LF Q+++LL + + + S S+ + L+ L Sbjct: 124 VKQLILQLAGQARSERPEDIATSESLFLQILVLLRQKGFRTQS--DGSAAQGIQALLGWL 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + D + S S R + +Q +Q TGMT +YL ++R+ A+ LQ S I+ Sbjct: 182 QNNFCEEVNWDALAERFSLSLRTMHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 I+ +CGF DSN+FS F + + P RH ++ Sbjct: 242 TIAHDCGFSDSNHFSTQFRKAFSLAPKSLRHRAQHEE 278 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 13/266 (4%) Query: 12 FFASDQQAVAVAD--RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 FF ++ + A ++ H H+F E+ + +G H++ D Y + + Sbjct: 7 FFMAEGRPFASERIAGVNDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFP 66 Query: 70 ADDKHSYASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 H ND+ + ++ + PE ++ + S ++L A Sbjct: 67 PFVMHHSFEENDVPFRRLLLYFNPEVIRSPQILRTL------SERARVYKLPRAQSAPIY 120 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 ++ + E + ++ E+ L+ L + L R+ SD + +I L Sbjct: 121 NLMKDILQEQERDDLYSRELITLMVNALALQLVRN---SDEAARPEQRNRVTDIINYLHE 177 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 L++ + S+ L ++F++ T TI QY+ +RV HAQ LLQ S I++I Sbjct: 178 HFTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEI 237 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQ 273 S GF + +F+ V+ TGM+PSQ Sbjct: 238 SKRVGFSNVTHFNRVYKSVTGMSPSQ 263 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 14/284 (4%) Query: 5 LKLLKDDFFASDQ-QAVAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITR 62 + +K +F +D+ + Y + + HTH DF ELVIV G H++++ + I + Sbjct: 1 MAEMKLSYFTNDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKK 60 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKL---------NLDWQGAIPGFNASAG- 112 GD+F I+++ H Y + D + NI+Y E L L I + Sbjct: 61 GDVFVINSNTCHGYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEHS 120 Query: 113 -QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 + + L + + ++ L E + LF LV+ L R +S Sbjct: 121 FKSNLTLKPLDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDFGNS-SE 179 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + K I+ + ++D + S R + F + T Y+ +R+ Sbjct: 180 KVDVINIAKSISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIR 239 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 A LL+ + L IS I+ +CGF DSNYFS +F + +TP Q+R Sbjct: 240 RACSLLKETTLPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 22/290 (7%) Query: 11 DFFASDQQAVAVAD---------RYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRI 60 ++F + + V + D+ HTHDFCEL ++ RG+ +H L + I Sbjct: 22 NYFDNPYHPLTVRRVKAGSDSEITHEHDLTEVRHTHDFCELALITRGSAMHWLEGAEFPI 81 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--------- 111 T GD+F + H Y + L + NI++ PE+L L IPG+ A Sbjct: 82 TAGDVFVLQGQQSHYYYDLQKLEMINIMFDPEQLNLPETRLRKIPGYRALFLLEPLFRKQ 141 Query: 112 --GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 H L +A + ++ +L++E + F +LV+ L+R Y Sbjct: 142 HRFTSHLHLSRSTLAHSERIAVELDNEVRGKMEGYEAAMFAKFVELVVYLSRL-YQETES 200 Query: 170 PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + + K+I + P+ ++ F A S + FR TG T YL Q+R Sbjct: 201 TNAEALLRVAKVIGSIEDEFTKPWKVEDFAAMAHMSRANFMRVFRTATGETPINYLLQLR 260 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 + + LL ++L IS+I+ E GF DSNY++ F G++P +R ++ Sbjct: 261 IQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQFKASQGISPLAYRRTHT 310 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 112/280 (40%), Gaps = 11/280 (3%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYR 59 M++ + L V+ R V H H + E+ + G +N Y Sbjct: 8 MSNTMILK------DKSVQVSRIRRSSSFVMKRPHYHSYYEIYYLLSGKCKMFINQDIYY 61 Query: 60 ITRGDLFYIHADDKHS--YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR 117 + GD+ I + H Y + I + + + L G F QP Sbjct: 62 LEPGDMTIIPPLEVHKALYEPSWEAERFGIYFSRDTVTSFLSLCGR-EAFGHIFSQPKRT 120 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSET 176 + S + +++ Q++ E Q + L Q++++L R + + +E Sbjct: 121 IPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSLLHQILVVLGRCQEARREGHALEEAEE 180 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 + + + + L + A+ S ++F+ TG+ +YL +RV A + Sbjct: 181 AMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYLNYIRVQKASDM 240 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 L+++ L ++ ++ CGF D NYF VF R TG++P ++R Sbjct: 241 LRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSPREYRK 280 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 97/246 (39%), Gaps = 2/246 (0%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ-NIIYCP 91 H H + E+ + G ++ Y + GD I H L + +Y Sbjct: 37 PHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMYFT 96 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 + GF P + ++ L HE+ Q +++ + L Sbjct: 97 KEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQSL 156 Query: 152 FGQLVMLLNRHRYTSDSLPP-TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 Q+++L+ R + T SE + K + + LD ++ S Sbjct: 157 LFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPTYFS 216 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 ++FR TG +Y+ +RV A LL+++ ++ I+ CGF D NYF VF + TG++ Sbjct: 217 RKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTGLS 276 Query: 271 PSQWRH 276 P ++R+ Sbjct: 277 PREYRN 282 >UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6X4_9BACT Length = 295 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 14/286 (4%) Query: 7 LLKDDFFASDQQAVAVADR-YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + D F D VA+ R Y ++ H+H+F ELV+V G+GLHVL +R Y I GD+ Sbjct: 12 ITSDHHFHRD-MPVALRIRDYSENSDLLHSHEFHELVLVLGGSGLHVLQERSYPIYPGDV 70 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFN-----------ASAGQP 114 F I H Y ++ L + N +Y P+RL LD ++ G+ + + Sbjct: 71 FLIKPRQVHGYRNLKKLNIANFLYLPDRLAAELDQLKSLLGYYVFFESDPLLAGRARYKN 130 Query: 115 HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS 174 L + QAR++ ++ E + P M+ LLF QL++L+ R S++ + Sbjct: 131 RLTLEAERFNQARELTLRMRREQQRQTPGWELMSRLLFLQLMLLICRTFSKSET-TGSEE 189 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + +++ + P AL + CS L + FR+ + YL ++R+ A Sbjct: 190 TMKIGRILRYFEENYARPVALAEVARHCGCSVPTLTRFFREAMDDSPIDYLNRLRLDKAA 249 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 LL+ SRL +++I+ + GF DSNY + FTR ++P +R +NS+ Sbjct: 250 ELLRSSRLPVTEIARKTGFCDSNYLTKCFTRRFALSPRAYRQMNSE 295 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 10/277 (3%) Query: 8 LKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFY 67 + F + V Y EH+H+F E+ V G G+H + + G LF+ Sbjct: 10 MSASSFFEPGVPLYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFF 69 Query: 68 IHADDKHSYAS-----VNDLVLQNIIYCPERLKLNLD---WQGAIPGFNASAGQPHWRLG 119 I H + L++ N + L D + I A G W Sbjct: 70 IPVGQSHVFRPKTPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLS-WFSV 128 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-L 178 + + +L E + P + L +++ L RH+ + + L + Sbjct: 129 KDSTGEYHAMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSV 188 Query: 179 DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ 238 D+ I + + S L + +A SER + FR+ TGM++ +Y++ +R+ A LL Sbjct: 189 DEAIAFIDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLT 248 Query: 239 HSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + DI+ G+ D +F +F ++TG+TP Q+R Sbjct: 249 TRHSSVEDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 13/285 (4%) Query: 5 LKLLKDDFFASDQQA-VAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITR 62 ++ + ++F SD+Q + + H H DF ELVIV GN H++N I + Sbjct: 1 MRSVHLNWFTSDEQFLFYIGYGGHDEDMYLHDHVDFSELVIVLNGNATHIVNTEVSFIKK 60 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNA-SAGQPHWR---- 117 GD+F I H+Y +D + NI+Y P+ L G+ A +P +R Sbjct: 61 GDVFVIDGATSHAYKDPHDFRICNIMYRPDILTSAGPDLRTSIGYQALFVLEPFYRNIQP 120 Query: 118 ------LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 L + + + E + + M F +LV+ L+R D Sbjct: 121 FNSKLSLPIPSLEYVSSLAAFMIEEYTNKLQGYQTMLRSRFMELVVYLSRQYQNQDQQGI 180 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + L I+ + P ++ D++ S R L + F+ T YL ++R+ Sbjct: 181 QGNLMHLANAISFMEDHYLEPLTREQIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLE 240 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 HA +LL+ + + I+++S + GF DSNYF+ FT+ G+ P +R Sbjct: 241 HACHLLKTTPVPITEVSYKSGFNDSNYFTRQFTKVYGLAPKVYRR 285 >UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787DEA Length = 290 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 8/283 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M ++ D+F D + V + H HDF E+ + G G H + + R+ Sbjct: 1 MKRPMETYYGDYFFRDDTLMYVNRNAENFTGSYHNHDFLEIAYIAEGEGFHHMENSVQRV 60 Query: 61 TRGDLFYIHADDKHSYASVN----DLVLQNIIYC----PERLKLNLDWQGAIPGFNASAG 112 +G +FYI H + + L++ N I+ P+ + D + A G Sbjct: 61 RKGHMFYIPLGMPHVFRPTSSNGKPLIVNNCIFSVKLLPKLIAFASDSRTASLLKQMEDG 120 Query: 113 QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT 172 +R + + ++ L + + + + L QL++ +R S + Sbjct: 121 TLGYRAITDRHDRFEKLFVSLYEQYAMQISGSAVYLHTLLLQLIIEFSRAIEHSQPITSE 180 Query: 173 SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 S ++ + L + + SER L++ FR+ TG + + YL+ VR+ Sbjct: 181 PSHPSFHDVLQYVEGQYMHELTLTRLAQISGFSERHLQRLFRRYTGQSWHHYLQTVRIRM 240 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++ LL+ + IS I+ + G++D + F+ VF R TG+TP Q+R Sbjct: 241 SRELLRTTTDKISMIAEKVGYKDMHSFNSVFKRSTGLTPGQYR 283 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 12/283 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 ++ ++K K DF D + D F H H + E+ + GN ++N Y + Sbjct: 6 LSDKIKDYKIDFAERDAD-------FHMDRF--HYHPYYEIYFLLSGNCSALINHSIYHL 56 Query: 61 TRGDLFYIHADDKHSYA-SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG 119 GD I H + N V + ++ +L P L Sbjct: 57 VPGDFVLIPQSAMHRFVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLT 116 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD 179 S+ A ++ L E+ + + ++ LL R+R S+E + Sbjct: 117 SLLQGNATRLFDTLYQETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENAIQ 176 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 ++ + P +L D S ++F+Q TG+ +YL + R+ A LL H Sbjct: 177 ASARYISTHFQEPVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTH 236 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + L +++I+ CGF D NYF F +E G++P Q+R QK+ Sbjct: 237 TSLNVTEIAIRCGFNDGNYFGDAFRKEFGLSPLQYRK--RQKN 277 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 12/282 (4%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 +L +D+ + V V H H+F EL V G G H LN Y ++ Sbjct: 4 KQPPRLTNEDYRLQPRAPVQVFHGIHPGTIPLHWHEFYELSYVVGGEGEHRLNGSAYPLS 63 Query: 62 RGDLFYIHADDKHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG 119 G LF + D H SV D L + N+I+ + NL H +L Sbjct: 64 SGTLFLLTPADFHELVSVEDKPLEIYNVIFTEAMMDDNL-----YHWLFGGKLVLHAQLE 118 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-- 177 M Q ++ E+ + +L++ LNR + +LP + Sbjct: 119 EMQHRQIFADYERMREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQL 178 Query: 178 ---LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 L + + + + L+ +A S + F + G + +YL+ VR+ A+ Sbjct: 179 NVNLQRALIYIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAE 238 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LL+ S L +++I GF +F VF + GM+P Q+RH Sbjct: 239 SLLRVSSLPVTEICYASGFNTLGHFERVFRQRKGMSPRQYRH 280 >UniRef50_Q65Q31 HTH-type transcriptional activator rhaS n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAS_MANSM Length = 268 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 6/270 (2%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 KLL DFF + +Q + + R PQ++F EHTHDF ELVIV G+G H+LN P+ + G + Sbjct: 4 KLLARDFFNNKEQPIILEPRAPQEIFPEHTHDFDELVIVKHGSGRHILNGYPHDLYPGVV 63 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 YI A D HSY ++ DL L NI+ N + I +P + + Sbjct: 64 LYIQAQDHHSYENLQDLCLTNILIQSNN---NFKYLNNIDILLNGL-KPENSSYQLINKK 119 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 + I L + + N E LF Q++ + H++ ++E ++I L Sbjct: 120 TAEYIDSLLEKINAIDESYNLQNECLFFQVLSSIQAHQFNDSG--YGNTEEKGRQMIRWL 177 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + + ++ ++ + R L + + QTG T Y+ ++R+ A Y L+++ I Sbjct: 178 ENNFEKEIDWEELAEKFALPIRTLHRYIKSQTGHTPQNYVTKLRLAQAYYQLKYTEKNII 237 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +I+ +CGF DS+YFS F E + P + R Sbjct: 238 NIAYDCGFNDSSYFSTCFKNEYSIAPRELR 267 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 12/252 (4%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN 86 P +H+HDFCE++ V G G +L + +R+ GDL ++ H S L Sbjct: 31 PNWFNIQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPL-- 88 Query: 87 IIYCPERLKLNLDWQGAIPGFNAS-AGQPHWRLGSMGMAQARQ--VIGQLEHESSQHVPF 143 RL A+PG A Q +R+ S G + + + +L E+S + F Sbjct: 89 ------RLIFLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEF 142 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 E+++ L L++L+ R + S+ K+ L + SP LD + Sbjct: 143 YQEISQGLVSALLVLVMRLIRINPEDEAALSQE-CQKIKEYLDQNFTSPITLDSLSETVY 201 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S+ L F++QTG++ +YL R+ A LL + L +S++S G+E+ YFS VF Sbjct: 202 ISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVF 261 Query: 264 TRETGMTPSQWR 275 R G++P ++R Sbjct: 262 KRIYGISPVKYR 273 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 7/261 (2%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 + A+H HD EL + G ++ + DR YR+ GDL ++ + H ++ Sbjct: 28 SMSADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLV 87 Query: 89 --YCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 PE G G P RL S +++G + +E + Sbjct: 88 LYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGS 147 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSS---ETLLDKLITRLAASLKSPFALDKFCDE 201 + + +L++ R R+ + ++ L + + L + + Sbjct: 148 SWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEA 207 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 S L + F+Q TG T + YL +RV AQ LL+ S I+DI+ GF + ++F Sbjct: 208 FRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGK 267 Query: 262 VFTRETGMTPSQWRHLNSQKD 282 +F R ++P +R + Sbjct: 268 MFKRTVQLSPRAYRQQYRMRS 288 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 9/272 (3%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 ++F ++ A R + H+HD ELV ++ G +++ YR+ G L I Sbjct: 6 SEYFNINKLIREAAFRMDET----HSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIP 61 Query: 70 ADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFN---ASAGQPHWRLGSMGMAQA 126 + H + ++ ++ + DW + G + + + Sbjct: 62 PGEIHKTSYGSNDKVRQQRTALRFSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYI 121 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT--SSETLLDKLITR 184 +I ++ +E+ + M + LF + ++ + R + D+ + + + + T Sbjct: 122 ENLITRMIYENQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATY 181 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + LD + S S L ++F+Q TG +YL VR+ A LL + I Sbjct: 182 VYNNYDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSI 241 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 +DI+ CGF DSNYF F R G++P+++RH Sbjct: 242 TDIAFACGFNDSNYFGDAFRRIKGISPNKYRH 273 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 5/267 (1%) Query: 17 QQAVAVADRYPQDVFAE-HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH- 74 + ++ R + AE H H E ++ G+ +N Y + GD+ ++ + H Sbjct: 2 KYNISRTKRSYEFHMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHR 61 Query: 75 -SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 +Y S I + E L + G + + ++ ++I ++ Sbjct: 62 TTYHSSPVNERVTISFDGEYLDSMKELCGE-ENVEYIFRNSKVTVPNGNRSRVEELIRRI 120 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSETLLDKLITRLAASLKSP 192 E+E + F+ M + F +L++ L+R + D E ++ + ++P Sbjct: 121 EYEETGQDGFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNP 180 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 L++ + + S ++F+ TG +YL +R+ A LL HS +++I+ CG Sbjct: 181 ITLEEVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCG 240 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNS 279 F D NYF F + G++P +R + Sbjct: 241 FGDGNYFGDAFRKAKGVSPRAFRKMQG 267 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 10/254 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL--VLQNII- 88 EH HD E+ + G + + D+ YRI GDL I + H + L + I+ Sbjct: 29 GEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERILV 88 Query: 89 -YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 + E + L + A P RL + +Q++ ++ E Q E Sbjct: 89 NFRTEVVSALLPGREE-ELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYEEY 147 Query: 148 AELLFGQLVMLLNRHR-----YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 +LL +L++ L R + + + ++ + A +L + Sbjct: 148 CQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLANRF 207 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S L F + TG+T+ Y+ +VR+ A LL+ + L +++I+ G++ +F V Sbjct: 208 HLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRV 267 Query: 263 FTRETGMTPSQWRH 276 F + ++P +R Sbjct: 268 FKKAKAVSPQSYRR 281 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 5/261 (1%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN 86 + H H E ++ G + D Y+I GDL ++ +D H + ++ + Sbjct: 29 YHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHER 88 Query: 87 II--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 I+ Y + + ++ P +L + L E + P Sbjct: 89 IVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGY 148 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFCDE 201 + ++++ RH SLP + K +I + + P LD+ + Sbjct: 149 QLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQ 208 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 S+ L + F++ TG +QY+ R+ A+ LL+ + I+ IS CGFE+ ++F Sbjct: 209 FFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGK 268 Query: 262 VFTRETGMTPSQWRHLNSQKD 282 VF +G++P +R L + Sbjct: 269 VFKELSGLSPRDYRKLEQNQK 289 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 17/261 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS--YASVNDLVLQNIIYCP 91 H HD+ ++ V +G LH + + Y I +GD+F I HS + D+ + + P Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWR-----------LGSMGMAQARQVIGQLEHESSQH 140 + Q F A ++ L S+ R V+ + E + Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERR 166 Query: 141 VPFANEMAELLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKLITRLAASLKSPFALD 196 PF + L+ +L R ++ +++ + + L+ Sbjct: 167 TPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLN 226 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 C ++ S F++ TG T N+YL +R+ A +L+ L ++D+ GF + Sbjct: 227 DLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNEL 286 Query: 257 NYFSVVFTRETGMTPSQWRHL 277 +YF +F + TG++P+ +R Sbjct: 287 SYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Klebsiella RepID=A6T9P9_KLEP7 Length = 274 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 5/273 (1%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + L + +F Q + + P+D EH H+F ELVIV G+GLHV+N RP I +GD Sbjct: 2 MTLTVEYYFTHPQDKLGMYASDPEDNSQEHGHEFAELVIVEEGHGLHVINGRPLYIQQGD 61 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPER-LKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 +FY+ D H Y + L L N++ P +G + +A + L Sbjct: 62 VFYVQPGDVHYYDELGTLKLINVLINPAVAFGYLQQMEGLLQQLSAQRAACYGWLAPETR 121 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT 183 + R+++ ++ + + E LF QLV + +S+ L KL+T Sbjct: 122 SYCRELVEKIFSP-ALRAADNTPLRESLFFQLVTTI---LTAESEAEYSSTRYKLHKLLT 177 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 L + ++ + R + ++ TG+T + YL+++R+ A+ L+ + + Sbjct: 178 WLQEHCFEEHNWQQLAEQFHLTTRTAFRHIKEATGLTPDNYLKRLRLVSARVKLRETEMT 237 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I++++ CGF +SN+F+ ++ + G+TPS R Sbjct: 238 ITEVAYLCGFANSNHFTTLYKKVFGLTPSADRR 270 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 98/246 (39%), Gaps = 3/246 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC-PE 92 H H F E+ + G ++ Y+ +GDL + + H + + I+ Sbjct: 28 HVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVISFRN 87 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 + Q + ++ +L E+ + ++ Sbjct: 88 EATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIKVGL 147 Query: 153 GQLVMLLNRHRYTSDSLPPT--SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 +L++ + R + +++ ++ ++ T + +L+ D+ + S L Sbjct: 148 IELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSYLS 207 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 ++F+ TG +Y+ VR+ +A LL + I+DI+ ECGF DSNYF F + G++ Sbjct: 208 KKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKGIS 267 Query: 271 PSQWRH 276 P ++R Sbjct: 268 PHKYRK 273 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 9/270 (3%) Query: 15 SDQQAVAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + R P H H+F E+ + G +ND Y +++G+L I Sbjct: 4 NQDLKITRIKRDPYFSMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGAL 63 Query: 74 H--SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 H +Y S I + L+ G + QP+ R+ +I Sbjct: 64 HRTTYISGGSHERICITFSKSFLQPLFQEFGEEAVLKCFS-QPYVRIPQSRREYFEDLIS 122 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-----DSLPPTSSETLLDKLITRLA 186 + E ++ +A +L++ + R S + + +++K + Sbjct: 123 KAHREMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYIC 182 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 ++ +SP L++ + S ++F+ TG +YL +R+ A LL H++L I++ Sbjct: 183 SNYQSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITE 242 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I+ GF DSNYF VF R G++P ++R Sbjct: 243 IALLSGFNDSNYFGDVFKRMKGISPCKYRK 272 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 109/276 (39%), Gaps = 9/276 (3%) Query: 13 FASDQQAVAVADRY---PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 F ++ + R + + H HD E+ + G + + DR + + G L I+ Sbjct: 8 FDYPDRSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLIN 67 Query: 70 ADDKHSYASVN--DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 D H + D V + + + L + + G + S Sbjct: 68 RQDVHRTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMNNNY-VIPFLSAEQQYVE 126 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDS---LPPTSSETLLDKLITR 184 ++ ++ HE + L L++ +R+ ++ PP+ + +++ Sbjct: 127 VLLDKMIHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQY 186 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + ++P L S+ L + F+Q TG T +Y+ +R+ AQ LL+ + + Sbjct: 187 INTNYQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKV 246 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 DIS GF ++F VF T +P +R LN++ Sbjct: 247 IDISEAVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C4LCV2 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV2_TOLAT Length = 277 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 146/278 (52%), Gaps = 7/278 (2%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++L +F + +A+ P+D EH H+F ELVIV G+GLHV+N +P I GD Sbjct: 1 MRLETQTYFHAITDKLAIYSSDPEDNNKEHCHEFDELVIVKSGHGLHVINGQPLFIKTGD 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPER-LKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 +FY+ ++ H Y + L L NI+ P+ + + + + + + L S G+ Sbjct: 61 VFYVKNNEYHFYDELGTLKLINILINPDADFFFIKNIEPLLRKLTSDSLDEYAWLDSAGL 120 Query: 124 AQARQVIGQL-EHESSQHVPFANEMAE-LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 ++A ++ L +H+S H N++ + LF QL+ L+ +++T ++E ++K+ Sbjct: 121 SKATEIARHLFDHKSKNHDAGGNKLEQEALFLQLITLILEYKHTDSD----NTEHKINKI 176 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + S ++ R L + +++TGMT + YL+++R+ A+ ++ + Sbjct: 177 LKYVQTDCFSDINWHDLSEQFGVPLRTLFRHLKEKTGMTPDNYLKRLRLISARKKIRETD 236 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 + I++I+ +CGF +SN+F+ + G+TPS R S Sbjct: 237 ISITNIAFDCGFSNSNHFATAYKSVFGITPSTERTNYS 274 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 13/285 (4%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 ++ F + Q V + EH H + E+V V G G H + D + ++G L+ I Sbjct: 20 EEHFHN-QFPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNKTSKGSLYIIP 78 Query: 70 ADDKHSYAS---VNDLVLQNIIYCPERLKLNLDWQGAI----PGFNASAGQPH-WRLGSM 121 H + N L++ N+ P+ + W + G P + Sbjct: 79 IGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDGNPGTYLFLRD 138 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL----PPTSSETL 177 + QL E ++ QL+ ++R T DS ++ + Sbjct: 139 TPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGDQTTGSTRHSE 198 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 ++ + + P +++ D+A S+R + FRQQTGM ++Y++ RV A LL Sbjct: 199 FVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELACQLL 258 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + ++DI+ + G++D +F VF + G+TPSQ+R S K Sbjct: 259 TGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYRPEASNKS 303 >UniRef50_C0AEA5 L-rhamnose operon transcriptional activator (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEA5_9BACT Length = 249 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 104/248 (41%), Gaps = 12/248 (4%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 +L +F + V+V Q H H+F EL IV G G H+ Y IT GD+ Sbjct: 3 RLRVSSYFKIPELPVSVLAMSEQRSMEIHRHEFAELAIVTAGAGEHLTEQGSYPITAGDV 62 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP----------- 114 F+I + H YA L L N+++ P RL A+PG+ A Sbjct: 63 FFIPPELPHGYAHAQGLRLVNVLFLPGRLPEPGAELRAMPGWRALFELEPKYRDVHGAAG 122 Query: 115 HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS 174 H RL +A+ + LE+E + P +F QL+++L R Y ++ Sbjct: 123 HLRLPPDELARVTALTRALENECRAYTPGGTTWVTAVFQQLLVMLARS-YVPNAAEAGRR 181 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 ++K+I + + AL+ A S ++ FR TG + Y+ Q R+ A Sbjct: 182 LLAVEKVIEHIDENYAEELALESLAQMAGMSLSTFKRAFRTVTGTSPIDYVMQTRLTRAC 241 Query: 235 YLLQHSRL 242 +LL+ S Sbjct: 242 HLLRTSER 249 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 16/269 (5%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY--ASVNDLVLQNI 87 + H H+F ELV + +G+GLH + IT GD+F I H+Y + + N+ Sbjct: 30 MIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVVNV 89 Query: 88 IYCPERLKLNLDWQGAIPGF-----------NASAGQPHWRLGSMGMAQARQVIGQLEHE 136 ++ P L+ L + F + + Q L M R ++ QL E Sbjct: 90 LFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLMKE 149 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTS--DSLPPTSSE-TLLDKLITRLAASLKSPF 193 + + +L ++L+R + SLP ++ ++ ++ + P Sbjct: 150 YGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARICEFIKRHQAHPL 209 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +L++ A S+ FRQ TGM+ ++ R+ A+ LL S I+ I+ + G+ Sbjct: 210 SLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALDTGY 269 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 ED ++F+ VF + TG TPS +R + Sbjct: 270 EDLSHFNHVFKKLTGETPSLYRKRMKGRS 298 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 99/261 (37%), Gaps = 5/261 (1%) Query: 24 DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV 83 R H H E+ + G + + ++ Y I GDL I+ D H + D Sbjct: 25 HRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGHGDPE 84 Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQARQVIGQLEHESSQHV 141 + I+ L G Q P RL A Q++ ++ E + Sbjct: 85 HERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMADEIRERS 144 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL---ITRLAASLKSPFALDKF 198 M ++L +L++ R +++ S L K+ + + L Sbjct: 145 ASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYADKITLQGL 204 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + S L + F++ TG TI YL R+ AQ LL + L I DI+ GFE + Sbjct: 205 SETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESIGFESLTH 264 Query: 259 FSVVFTRETGMTPSQWRHLNS 279 F F + MT SQ+R +NS Sbjct: 265 FDRTFKKIMNMTASQYRKINS 285 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 11/268 (4%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 + A A A+ ++ H HDF EL + G +H++ Y +T D H Sbjct: 12 GKKIAYAYAEGVNDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMH 71 Query: 75 SYASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQ 132 D+ + I+ + P+ + + Q + + + + ++ + + Sbjct: 72 HSYGEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGY--IPNQILSLLLSLTHE 129 Query: 133 LEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 ++ H + + L G L+ +L S+P T S K + + Sbjct: 130 IDVPGKYHDAY---ICNQLNGLLLNMLRLDFEAVKSIPKTRS----AKAVDYIHNHYMED 182 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 ++++ + S L +F+ TG TI QYL R+ HAQ L+ + I+ IS E G Sbjct: 183 ISVNQLAEILYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVG 242 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 F + +F+ F + TG+ P + + L + Sbjct: 243 FSNLTHFNRTFKKITGVAPREKKKLYQK 270 >UniRef50_Q1ZN25 L-rhamnose operon regulatory protein n=2 Tax=Vibrionaceae RepID=Q1ZN25_PHOAS Length = 264 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 4/261 (1%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 + V R PQ+ F EH H F E++IV G G HV+ND P +++ + +I +D+H Sbjct: 2 NSNSPVTTELRAPQEPFPEHAHSFEEIIIVSDGCGTHVMNDVPMSLSKNYVCFIKKEDRH 61 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 Y V+ L L NI++ ++L+L+ D + +P N + + W + R++I +L+ Sbjct: 62 LYDRVDALYLSNILFEKDKLQLSSDLKRFMP--NEADKEMGWFINESTAQSVRKLIERLD 119 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFA 194 ES + +++ +F Q+++ L R + L + + ++ + Sbjct: 120 IESHIDSEESRMISQFIFQQIIVELWRGKIKDVDLINHGDKVIY--ALSHIRQHFADVNE 177 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 +++ D S R L ++ TGM NQYL R A + ++ I+DI+ G++ Sbjct: 178 INEVADAVKLSSRQLTNSIKKLTGMNFNQYLHYTRTSKAFSDILYTDQSITDIAFRVGYQ 237 Query: 255 DSNYFSVVFTRETGMTPSQWR 275 DSNYFS F + TP + R Sbjct: 238 DSNYFSTKFKQVFKQTPRETR 258 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 114/288 (39%), Gaps = 11/288 (3%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFA---EHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 + L + F+ + + + F EH H EL ++ G + + DR Y I Sbjct: 1 MNLSNELFYGDSEDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIA 60 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLG 119 GDL I A++ H + I+ Y + + + + + +RL Sbjct: 61 AGDLVLIPANELHKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLA 120 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY------TSDSLPPTS 173 + Q++ L E + P + ++ RH + S+PP+ Sbjct: 121 HQERLRFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSP 180 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + ++ + +A + P LD + S L + F++ TG + +Y+ RV A Sbjct: 181 AAAKAMEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEA 240 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 Q+ L+ + I++I+ E GFE + F VF ++P +R+ QK Sbjct: 241 QHQLRETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 114/265 (43%), Gaps = 10/265 (3%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA----SVND 81 Y ++ +H HD E+ + G + + + Y + +G L +++ H S +D Sbjct: 22 YEYNMPTKHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGTSYHD 81 Query: 82 LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHV 141 +L + P + ++ F + L + +++ + E Sbjct: 82 RILIELKEEPFASFFSFFGDLSLKDFFSK-HYGVLELEEKDQRRIERLLTSISTEIQNKS 140 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS-----ETLLDKLITRLAASLKSPFALD 196 + +L++ R + +++ P ++ +D++ + + + +P +LD Sbjct: 141 IGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNNCTNPISLD 200 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 S+ L + F++ TG T+N+Y+ RV AQYLL +S IS+IS + GFE Sbjct: 201 ALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISAQLGFESI 260 Query: 257 NYFSVVFTRETGMTPSQWRHLNSQK 281 YF VF + T +P ++R N ++ Sbjct: 261 TYFERVFKKYTESSPLKYRKQNRKE 285 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 4/255 (1%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 ++ A H H+ EL + G + +N Y +G + I+ D H +S + I+ Sbjct: 25 EMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERIL 84 Query: 89 YCPER-LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 L Q A ++ +++ E ++ Sbjct: 85 INFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDV 144 Query: 148 AELLFGQLVMLLNRHRY---TSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 L QL+ + R + + P + + ++ + + S + LD + Sbjct: 145 VRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYI 204 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S L + F++ TG + +Y+R +R+ A+ L+ + I DI+ + GF+ ++F+ VF Sbjct: 205 SPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFK 264 Query: 265 RETGMTPSQWRHLNS 279 G+ P Q+R + Sbjct: 265 EIVGIPPLQYRKKSR 279 >UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8U7_9BACT Length = 298 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 112/275 (40%), Gaps = 17/275 (6%) Query: 18 QAVAVADRYP-----QDVFAEHTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 Q RY + H HD F ELV+V G+ HV + I GD++ I Sbjct: 11 QNFGFEVRYHVHDREYGIRDRHAHDGFYELVVVRSGSATHVHDGVKSHIESGDVYLIPPG 70 Query: 72 DKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQ--- 128 + H YA+ L + N+++ + L P A G L A R+ Sbjct: 71 EPHYYANARQLGIYNVLFTGDFFAGLLAEFPGAPDIEAYLGLSGGALPEGHRADVRRFDP 130 Query: 129 --------VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 ++ ++ E +Q + A M +++ L+ RH S S+ + Sbjct: 131 ELFFRITALLDEIVEEETQELSGARLMILSNALKILTLICRHARKSAERNIGSAGYRIAS 190 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L+ L A ++L + + S R+QFR+ G +L +R+ A +LQ Sbjct: 191 LVKTLEADFAGEWSLRRMAEHTGFSVACFRRQFRRIIGEPPVAWLLSLRLEKAAMMLQTG 250 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I++ + CGF DSNYF+ +F R G TP +R Sbjct: 251 DGSIAETAEACGFPDSNYFTRMFHRRFGATPRAYR 285 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 112/282 (39%), Gaps = 6/282 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADR---YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRP 57 M +L+L + S + V ++ + + H HD E+V + +G ++ + Sbjct: 1 MDERLRLKEKVQHGSAVFPINVYEKIFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKE 60 Query: 58 YRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR 117 Y + +++ H + ++ I++ L + + + Sbjct: 61 YFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLV 120 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL 177 S R++I + + + + + L RY + S + Sbjct: 121 QNSFEDEHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLK 180 Query: 178 LDKL---ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 L+K+ + + ++ S +D A+ S+ + F++ T +T Y+ + RV A Sbjct: 181 LEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAI 240 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 L++++ L IS+I+ E GF + +YF VF G+TP +++ Sbjct: 241 ELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKK 282 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 113/284 (39%), Gaps = 12/284 (4%) Query: 5 LKLLKDDFFASDQQAVAVADR---YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 ++ + F +D+ ++ R PQ +H HD+ E+V V+ G G +N Y + Sbjct: 1 MQTIHKRFEETDKFPFSLVYRDTKSPQRELPDHLHDWYEIVFVYSGTGTFFINHSFYEMN 60 Query: 62 RGDLFYIHADDKHSYASVN--DLVLQNIIYCPERLK--LNLDWQGAIPGFNASAGQPHWR 117 GD F I + H + I + P ++ + + F + ++ Sbjct: 61 PGDAFLIPGNTVHRAFPDEFSPVTSSAIFFAPRFIQPMEFGESHSLLRCFEQARKSKSYK 120 Query: 118 L--GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS- 174 L +I + E +P + ++ LNR T +SS Sbjct: 121 LETSPDKREAFSGLIDVMNEEWLNRLPSYRAAIAVRLYDFLIALNRMALTETEHTRSSSA 180 Query: 175 -ETLLDKLITRLAASL-KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 + + ++ + A + +L +AS + + F+Q TGM +++Y+ ++ Sbjct: 181 EPSWIRTILDYIDAHIGSQEMSLADLSSKASVTYAHFSRVFKQHTGMNVSEYILIKKIML 240 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 A+ L + I+ + CGFE +YF F TGMTP ++R Sbjct: 241 AKEKLMLTGDTIASVCLACGFESESYFYKKFKLITGMTPVEYRR 284 >UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3C3_9BACL Length = 295 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 15/282 (5%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F +D H+H F E+V+V G G H +N+ R+T+ D+F + A Sbjct: 6 FFTDSLPFYFNRVEETFDLQMHSHRFVEIVLVDEGEGFHFINEDIVRVTKNDVFLLPAGT 65 Query: 73 KHSY-----ASVNDLVLQNIIYCPERLKLNLDWQGAIPGF---------NASAGQPHWRL 118 +H + S L++ N +Y P +L L+ A+ P W Sbjct: 66 RHVFRPGHAGSRRPLIVYNCLYEPGKLLSCLEHLPGFHELIRSRPYLFEGAAPPSPGWLH 125 Query: 119 GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-RYTSDSLPPTSSETL 177 G + E ++ P F +L ++L RH S + Sbjct: 126 LRDGGSPWNIWFRGAYREFTERKPGYLLQLYGRFIELAVMLERHLERLGSSSAAEPENRM 185 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 +++++ R+ S + F SER + FRQ G T + Y+R R+ ++ LL Sbjct: 186 MEEVLRRIDTDYASRLSARSFAAATHLSERHFHRLFRQYAGCTFHDYVRNKRMERSRELL 245 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +RL + +I G+ D +F +F + TG++P+++R S Sbjct: 246 ASTRLPVMEIMRSVGYADKKHFLSLFKQSTGVSPTEYRRQAS 287 >UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJM2_CLOCL Length = 286 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 11/281 (3%) Query: 9 KDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 DD F ++ V P+ EH+HD+ E+ G +++N+R Y I +GD+ I Sbjct: 9 YDDSFFIEKVNSKVFYTMPR----EHSHDYYEIYYQLYGERYYIINNRSYYIKKGDIVLI 64 Query: 69 HADDKHSYASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQ-PHWRLGSMGMAQ 125 + H + + ++ + LK + + + L Sbjct: 65 NKGVFHKTTYAGAINYERVLVGFKEHILKDIIPQEEFTELLSTFEKDISIINLSIQNQHT 124 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHR---YTSDSLPPTSSETLLDKLI 182 + +L HE++ + ++LL +L++ +NRH + S P++ + ++ Sbjct: 125 FEVLFTKLIHENNNRLSSYETYSKLLLVELLININRHLEKGHVSYLEFPSALHKKVSEIA 184 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + + LD + S L + F+ TG + Q++ R+ +QYLL + L Sbjct: 185 QYITDNCDKVLNLDILAHKFLISPYYLSRVFKDVTGFNLIQFINSERIKKSQYLLIETSL 244 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS-QKD 282 I +I GF + +F+ VF T M+PS++R LNS QKD Sbjct: 245 PIYEICEVVGFNSTIHFTRVFNSFTSMSPSKYRKLNSKQKD 285 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 117/251 (46%), Gaps = 6/251 (2%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS-VNDLVLQ 85 P + F H H E+ V +GN + L + + ++ I ++ +H++ + D L Sbjct: 36 PFETFGPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLM 95 Query: 86 NIIYCPERL-KLNLDWQGAIPGFNASA--GQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + + PE + N D G + + + + + + + + ++ +E +Q Sbjct: 96 QLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSK 155 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + + + + +L++L+ +RY ++ P + L K I+ + + +S + + Sbjct: 156 YYQYLVVMYYAELLILI--YRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDVASQT 213 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 ER LR+ F Q ++ YL Q+R+ A LL+++ + + ++ CGF+ YFS + Sbjct: 214 GVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQYFSRI 273 Query: 263 FTRETGMTPSQ 273 F ++ G++P + Sbjct: 274 FKQQMGISPRE 284 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 8/254 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+ E+ + G G +++N + + +GD+ I+++D H DLV+ I + Sbjct: 39 HWHNVLEINYIKSGMGYYIINGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTW 98 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRL---GSMGMAQARQVIGQLEHESSQHVPFANEMAEL 150 NL + + G+ + L M + R ++ +L+ E + Sbjct: 99 FIHNLRFDPELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYS 158 Query: 151 LFGQLVMLLNRHRYT-----SDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 L Q + +NR S+ + ++I + + P+ L++ S Sbjct: 159 LLLQFLATVNRQCRIEGEGGSEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLS 218 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 + F++ GM YL +R+ A +L+ + + D++ ECGF F+ +F + Sbjct: 219 PSRFSEIFKRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKK 278 Query: 266 ETGMTPSQWRHLNS 279 GMTP + +S Sbjct: 279 HIGMTPKASQKQHS 292 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 10/248 (4%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 HTH F EL V G G+ + + + DL I+ +H+ ++++ + I++ E Sbjct: 36 PHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEHTEKTMSNDPMTYIVFGVE 95 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 L + Q A G ++ GS + E + P + L Sbjct: 96 GLAFYFNSQNA----ANPKGYSYYNYGSAKT-HFINFSQIMIKEFNARKPGFEAICHGLL 150 Query: 153 GQLVMLLNRHRY---TSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 L++ + R ++ SD+ S E + K + A+ LD + ++ L Sbjct: 151 QVLLVYITREQHLSVISDTTLQISKECFVAK--KYIDANYAKNITLDLLAEITHINKFYL 208 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 F + G + YL + R+ ++ LL S I+++++ GF +YFS +F + TGM Sbjct: 209 SHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSYFSQIFRKNTGM 268 Query: 270 TPSQWRHL 277 +P Q+R L Sbjct: 269 SPLQYRKL 276 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 10/272 (3%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 + V + PQ H HD ELV V++G G + ++ GDLF I + HS Sbjct: 15 PMEMVYRTKKSPQLELPHHLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIHS 74 Query: 76 -YASVNDLVLQNIIYCPERLKLNLDWQ----GAIPGFNASAGQPHWR--LGSMGMAQARQ 128 + + ++ + ++ L L + + F + +R L A Sbjct: 75 SFPDPDQPIVSSALFFAPSLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQAYIED 134 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRL 185 ++ + E E L L++ +NR+ T + S+ L I + Sbjct: 135 MLKGISEEIRLAQLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSIQWI 194 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 L P L +A+ + F++ TG+ + Y+ R+ A+ LL++ + Sbjct: 195 HEHLDQPIGLAALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASVG 254 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+ CG+ +F F + TGMTP +R Sbjct: 255 QIAEICGYATLTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 5/253 (1%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 ++ H H++ E+ + G H++ D Y + G+L H ND+ + I Sbjct: 37 DNMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRI 96 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 + E ++ N +P ++I Q E+ S + + + Sbjct: 97 VLYFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTL 156 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 + ++M R + + T T ++++ + + + L++ + S+ Sbjct: 157 LNMFLFTMLMHTRRR--EPEQMEETGRTT---QIVSYIHSHYQEDITLEQLAQKFYVSQF 211 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L ++F++ T T+ QY+ RV +AQ L + I++IS E GF + +F+ VF T Sbjct: 212 YLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVT 271 Query: 268 GMTPSQWRHLNSQ 280 G TPS +R + Sbjct: 272 GTTPSGYRKHHQN 284 >UniRef50_B5HDN5 Predicted protein n=4 Tax=Actinomycetales RepID=B5HDN5_STRPR Length = 322 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 4/251 (1%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ 85 + F H H F E+V V G G HV++ +R+ L I H + V L Sbjct: 52 MSRAAFP-HRHTFYEIVHVTGGTGAHVIDLSRWRLRPPHLCVIAPGQVHHWDDVTGLEGS 110 Query: 86 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 +++ + L LD G A +P L A+ ++I L+ E + Sbjct: 111 VVLFTEDFL---LDHPGDRELLRRIAERPWRDLDEQTHARTARLIADLDEEYRRGAAGFA 167 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 + L LV+ R + PPT + ++ + +A + + ++ D S Sbjct: 168 TVLRALLHVLVVRTARLPEPAPPPPPTRHGAVAEEFLRLVARNEPALWSAAACADRIGVS 227 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 L + + TG T + +R+ R A+ LL + L + ++ GF D YF F R Sbjct: 228 VGYLAEAVKAATGRTPGRLIREARTHEAKRLLARTDLTVRQVAARVGFTDPAYFCRFFRR 287 Query: 266 ETGMTPSQWRH 276 ETG++P +R Sbjct: 288 ETGVSPGGFRR 298 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 10/259 (3%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD-DKHSYASVNDLV 83 R +++ H H + EL + G LH ++D+ YR G++ HSYA D Sbjct: 21 RSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMHHSYAPSEDQA 80 Query: 84 LQNII-YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 Q I+ Y E+ +L + P R+ Q ++G + E S+ Sbjct: 81 FQRIVVYFTEKAIGDLTLIEKMRH-AGGLYHPDRRMSH----QIHGLLGMMLMEQSETDD 135 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + E + L +L +L PT +++ + K+I ++ LD+ Sbjct: 136 LHDITMETI---LRAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLDELAGRF 192 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S+ L ++F++ T TINQY+ R+ +AQ + + S ++ CGF S +FS V Sbjct: 193 YVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFSRV 252 Query: 263 FTRETGMTPSQWRHLNSQK 281 F TGMTP+ +R SQ+ Sbjct: 253 FRSVTGMTPTAFRKSCSQR 271 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 12/248 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 HTH F EL V G+G ++ D + I + DL I+ + H+ S + L+ I+ Sbjct: 35 YPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKSSLEDPLEYIVLGV 94 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 + L +D F++ + R ++ + E+ ++ + L Sbjct: 95 DGLNFVIDDANEYLLFHSDEMKDRLDF------YFRTILEETENSQKD----YEKVCQNL 144 Query: 152 FGQLVMLLNRHRYTSDSLPP--TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 LV+ L+R+ +S + P + + +S + LDK + A ++ Sbjct: 145 LNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDKLAEIAQINKYYF 204 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 F + G++ YL Q R+ +Q LL + + ++ I+ +CGF S+YF+ F + GM Sbjct: 205 SHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSYFTQCFRKSCGM 264 Query: 270 TPSQWRHL 277 TP+ +R Sbjct: 265 TPTAYRKQ 272 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 6/247 (2%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H H+F EL +V RG G H+ + + + G +F +H + H+Y L L N ++ + Sbjct: 49 YHKHNFYELAVVLRGAGTHLTDSQKLPLRPGSVFLLHPGESHAYEYSEPLTLMNFMFDSQ 108 Query: 93 RLKLNLDWQGAIPG----FNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 L+ + G F + + + S +A+ ++ + ES Q A + Sbjct: 109 ILRPYRKSLSGLAGYPLLFCPAEERRELCVDSATLAELDILLHAMAMESRQRSAGAELLL 168 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 L++L+ R + +S+ + + + + + +L K A+ SE Sbjct: 169 ISHLLNLLVLVLRKSCSYVERERFNSDIGI--AVAFMRRNYQEEISLPKLARLANLSESS 226 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 ++FR++ + Q+L +R+ A L S + I +I+ GF DS YFS F R+ G Sbjct: 227 FFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATGFSDSLYFSRQFRRQVG 286 Query: 269 MTPSQWR 275 ++P +R Sbjct: 287 VSPKNYR 293 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 7/250 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNIIYCP 91 H H+ ELV V +G GL + Y RGD+F H+ + +NII+ P Sbjct: 37 HWHESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFEP 96 Query: 92 ERLKLNLDW---QGAIPGFNASAGQPHWRLGSMG-MAQARQVIGQLEHESSQHVPFANEM 147 E L D + +P + P + QA + +LE + P + Sbjct: 97 ELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYELL 156 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 + + + LL S T+ L ++ L+A P + S S Sbjct: 157 VKGALLRFLALLIAQGRQCLS-TETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSAS 215 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 + FRQ TG + +L + R+ A L+ + + I++ CGFE+ +YF+ F Sbjct: 216 HFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAHF 275 Query: 268 GMTPSQWRHL 277 GMTP +R Sbjct: 276 GMTPRDYRKK 285 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 12/256 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND-LVLQNIIYCPE 92 H H F EL+ V+RG+ ++ N+ I G++ ++ + H ++ D + NI++ Sbjct: 72 HKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPETLTDQDCVFNIMFRQN 131 Query: 93 RLKLNLDWQ---------GAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 + +LD + S+ + G A A I +L E + Sbjct: 132 FFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASA-DTIERLIVECFEKQSC 190 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 + + L +L L R+ S S P + E L+ K+IT + S L K ++ Sbjct: 191 YETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQESPAE-ITLQKVSEQFQ 249 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S L + +Q TG ++ +R R+ A+Y L+ S L I DI+ G+ D ++F VF Sbjct: 250 YSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIALILGYNDVSHFYKVF 309 Query: 264 TRETGMTPSQWRHLNS 279 +E G TP+++R S Sbjct: 310 KQEIGCTPTEYRKHYS 325 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 111/263 (42%), Gaps = 22/263 (8%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND----------- 81 H+HDF E+ + G+G + + DR Y ++ GD+ ++ KH + Sbjct: 32 YHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGL 91 Query: 82 LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHV 141 ++ + L L+L + P + P + ++ + E+ Sbjct: 92 CDVRFGDFPENYLPLHLKDLTSDP----ATQSPILHTSGELRQKLFKICTAMSVENDVCR 147 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSD------SLPPTSSETLLDKLITRLAASLKSPFAL 195 M + Q+++LL R + S TS + ++D+++ +L Sbjct: 148 SGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISL 207 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS-RLLISDISTECGFE 254 D+ + S + + F+ +TG T ++L +R+ A+ LL++ I +++ + G++ Sbjct: 208 DQIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYD 267 Query: 255 DSNYFSVVFTRETGMTPSQWRHL 277 D +FS +F + GM PS+ R L Sbjct: 268 DVYHFSKLFKKRFGMPPSKIRRL 290 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 5/246 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H EL + G G ++N +GD+ +I+++D H +LV+ I++ P Sbjct: 57 HWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPSL 116 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L ++L + + S G + S + +++ ++ E + Sbjct: 117 LSIDLKFDPDLMAPFRSLGNVDRQ--SPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 154 QLVMLLNRHRYTSDSL---PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 + + L NRH + L +++ + L + L + D S Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRFS 234 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 F+Q G + + YL Q+R+ HA +LL+ + I +I+ CGF + + F+ +F + G + Sbjct: 235 ALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGAS 294 Query: 271 PSQWRH 276 PS+ R Sbjct: 295 PSEIRE 300 >UniRef50_Q7MG26 AraC-type DNA-binding domain-containing protein n=4 Tax=Vibrio RepID=Q7MG26_VIBVY Length = 289 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 14/273 (5%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 A D + F H HDF EL +V G G H++ Y +T GD+F I+ D +H Sbjct: 13 YPHFKFAYVDGHHHSDFGLHKHDFSELFLVVSGKGNHLVASHVYPLTAGDVFVINGDIEH 72 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNA-----------SAGQPHWRLGSMGM 123 ++ V+ L + N+++ + G+ A + L Sbjct: 73 AFQDVDRLEIINLMFEAGTPFFETPSLRKLSGYQAMFKVEPIARQTGEYRAKLTLNDEQQ 132 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT 183 Q+I + HE Q M L QLV+ L R Y + ++ L + + Sbjct: 133 PLITQLIEAIRHEYQQGESGFETMLTSLMQQLVITLARM-YQQQTHDLPNTTLALSRALI 191 Query: 184 RLAASLKS-PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH-SR 241 + A S+R L + F+Q + N YLR++++ + + LL + + Sbjct: 192 FIEQHFADGEIHSGDVAQAAFVSQRQLERLFKQFLNTSPNLYLREMQLNYGRDLLNNEAG 251 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 + I ++ +CGF DSNYFS F ++ G++P Q+ Sbjct: 252 MSIQHVAEQCGFSDSNYFSKCFKQKFGLSPRQY 284 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 106/244 (43%), Gaps = 12/244 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL +V G G + + Y + +GD ++ + H+ S L+ I + Sbjct: 37 HTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTEKSDEKNPLEYIAVAVDN 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 LNL + FN + P+ + + + E + +++ + + + Sbjct: 97 FSLNLTDTNHLM-FNCISKNPN----------IIKYMDSMLAEQEGNKAYSDHICQNILE 145 Query: 154 QLVMLLNRH-RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 +++ + R + D+ P ++ KL + ++ S +D ++ ++ L Sbjct: 146 IILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLAKLSNLNKYYLIHS 205 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F + G + YL +R+ A+ LL++S IS IS GF +YF+ F + G++P Sbjct: 206 FNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCFIKSCGLSPK 265 Query: 273 QWRH 276 +R+ Sbjct: 266 AYRN 269 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 96/252 (38%), Gaps = 7/252 (2%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNIIY 89 H H+ E++ V +G G+ ++ PY G+ + H + + +NII+ Sbjct: 82 PVHWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAMEYENIIF 141 Query: 90 CPERL----KLNLDWQGAIPGFNASAGQP-HWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 P L + P G+P H G + IG L+ + Sbjct: 142 LPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIGILDQLCGKKNYAY 201 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 + + L+ + P S + +L+ + ++ + Sbjct: 202 QMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELCFY 261 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S + F+Q G+ QYL + R+ A +L + ++ ++ CGF++ +YF+ +F Sbjct: 262 SNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRLFR 321 Query: 265 RETGMTPSQWRH 276 R+ G TP ++R Sbjct: 322 RKYGKTPGEYRK 333 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 12/276 (4%) Query: 15 SDQQAVAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 +D A+ R +H H+ E+ + G + ++ R Y +T G L +I + Sbjct: 10 TDGIAIDRIRREAAFTMPCKHLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQI 69 Query: 74 HSYASVNDLVLQNIIYCPERLKLN----LDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 H + + I+ ++ + + ++ GF L G A + Sbjct: 70 HQTSQAGPGSHERILISLDQNPFSDFLAFTGEMSLEGFFRR-NSGILNLDKEGQNLAEYL 128 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP------TSSETLLDKLIT 183 + E + P + QL +L RH SL +D++ + Sbjct: 129 LDGAAKELHEKKPGFRHITMSKLSQLFILAQRHMSGPSSLSADLPLSTQPKHRKVDEVAS 188 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + +L+ ++ L + F++ +G T+N+Y+ +R+ A+ LL ++ + Sbjct: 189 YIIDHYDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMS 248 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 I+++S G+E YF VF + T +PS +R + Sbjct: 249 ITEVSESVGYETITYFERVFHQYTQTSPSGYRKQYT 284 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 105/254 (41%), Gaps = 4/254 (1%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 + H H + EL + G ++ ++D + + +GDL ++ D HS AS L+ + ++ Sbjct: 28 SMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLFERVL 87 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 R + G + + R+ + +++ + E + + Sbjct: 88 IGFSRTFIEQGDAGVANLLDHGTSR-LIRIPLKHQPEIERLLHSMLAECQTEQTHYSSLV 146 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPTSSETL---LDKLITRLAASLKSPFALDKFCDEASCS 205 L +L++ L+R T S + + ++ + ++ L++ + S Sbjct: 147 RSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVAKQFYIS 206 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 L + F + TG +Y++ VR+ AQ +L SR + IS GFE +F+ F + Sbjct: 207 PSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFNKTFKK 266 Query: 266 ETGMTPSQWRHLNS 279 G TP Q+R + Sbjct: 267 IAGTTPLQYRKRHG 280 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 13/250 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH EL G G +L+ + + + D+ ++ +H+ S+N L+ I+ Sbjct: 68 HTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVSG 127 Query: 94 LKLNLD-WQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 +++ FN + ++ L E+ + + + + L Sbjct: 128 IEILFGKADSTYAIFNCRENRERMVT----------LLHMLLAEADRSLDGCETVCQDLL 177 Query: 153 GQLVMLLNRHRYTSDSLP--PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 L++ L R S + P S ++ L + + +LD + A ++ L Sbjct: 178 EVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLA 237 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 F++ G++ YL + R+ ++Y+L ++ ++ IS GF +YFS F + G+T Sbjct: 238 HTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLT 297 Query: 271 PSQWRHLNSQ 280 P+++R Q Sbjct: 298 PNEYRRQVRQ 307 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 7/254 (2%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 ++ H HD+ EL + G H++ DR Y I G+ H ++ + + Sbjct: 18 DNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL 77 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 + K +D + G ++ +++ L E + + Sbjct: 78 LVY--FSKEEVDSVQLLKVLEKGTG--VYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDY 133 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 L ++ + R+ T + +I+ + + + ++D+ + S Sbjct: 134 IHTLLNMALLTIARNIQTPVK---PEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPY 190 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L ++F++ T TI QY+ RV +AQ + + I++IS + GF + +F+ VF Sbjct: 191 YLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVM 250 Query: 268 GMTPSQWRHLNSQK 281 GMTPS +R + + Sbjct: 251 GMTPSNFRKMYKTE 264 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 17/252 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP-- 91 HTH EL G G L + + + D+ ++ +H+ S+N L+ I+ Sbjct: 37 HTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVAS 96 Query: 92 -ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAEL 150 E L D AI + ++ L E+ + + + + Sbjct: 97 MEFLFSKADTNYAIFNCR------------ENRERMVTLLHMLLAEADRSLDGCETVCQD 144 Query: 151 LFGQLVMLLNRHRYTSDSLPPT--SSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 L L++ L R S L + ++ L + + +LD + A ++ Sbjct: 145 LLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYY 204 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L F+++ G++ YL + R+ ++++L ++ ++ IS GF +YFS F + G Sbjct: 205 LAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEG 264 Query: 269 MTPSQWRHLNSQ 280 MTP+++R Q Sbjct: 265 MTPNEYRRQTRQ 276 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 16/271 (5%) Query: 24 DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV 83 YP+ + H H E++ V +G G ++ D ++GDL ++ HS S D Sbjct: 54 YEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPPDGG 113 Query: 84 LQNIIYCPERLKL---NLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV---------IG 131 ++ LK+ N+ ++ ++ S + ++ R + I Sbjct: 114 EESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNLLEDACRGIKFTITRSGKII 173 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL----PPTSSETLLDKLITRLAA 187 +L + + L Q++ N +Y + S P ++K+I L Sbjct: 174 KLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERMEKVIAYLNK 233 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 LD+ + + + F++ TG T +Y+ +R+ +A LL S + IS I Sbjct: 234 HYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLNSSMMNISQI 293 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 S CGFE +F+ +F R TGMTP+ +R Sbjct: 294 SATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 100/250 (40%), Gaps = 6/250 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL V G G ++ + + + D I+ +H+ S D L+ I+ + Sbjct: 37 HTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSPLEYIVVGIQG 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L + P + L + + + E++ + + L Sbjct: 97 LSFS----NLTPVDQGGHPFSFFNLRDE-QKDILRYLNAMVQEATNQALSYDLVCHNLLE 151 Query: 154 QLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 L++ + RH++ + S T + + L + L+ S + Sbjct: 152 ILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFYISHS 211 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+++ GM+ +YL +R+ ++ LL+ + IS ++ GF YFS F + TG++P+ Sbjct: 212 FKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITGISPT 271 Query: 273 QWRHLNSQKD 282 +R ++ Sbjct: 272 DYREKYQKES 281 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 92/248 (37%), Gaps = 8/248 (3%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 EH+H F EL V +G G + + + + DL I+ + H+ + + I E Sbjct: 36 EHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGIE 95 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 ++ + A ++ + R + + L E + + L Sbjct: 96 GVQFQYSEKEAPYSYSVFSLSREHR-------EIPWYLSTLVKEIQTQQEGYQTICQNLL 148 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLIT-RLAASLKSPFALDKFCDEASCSERVLRQ 211 +++ + R P T +L+ + LD ++ L Sbjct: 149 ELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVH 208 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F+ G++ YL Q RV A+YLL+ + ++ I GF +YFS F R TG TP Sbjct: 209 AFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTP 268 Query: 272 SQWRHLNS 279 + +R Sbjct: 269 NAYRKKKK 276 >UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=C9XN35_CLODC Length = 312 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 126/284 (44%), Gaps = 19/284 (6%) Query: 1 MAHQLKLLKDDF--FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPY 58 M +++ L D+F F + F H HDF +++I GN + ++ PY Sbjct: 24 MDNKIGYLNDNFKIFNIRDKK--------DIQFEYHNHDFNKIIIFINGNVTYFVDGIPY 75 Query: 59 RITRGDLFYIHADDKHSYASVNDLVLQNIIY--CPERLKLNLDWQGAIPGFNASAGQP-- 114 ++ D+ +I ++ H +++ + I PE +K N D + A + Sbjct: 76 KLKPWDILFISNNEIHKPVIDSNVFYERIAIWISPEFMKKNSDATSDLEKCFKIATENKC 135 Query: 115 -HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS 173 RL + + I Q+ S + LF QL++ LNR ++++ T Sbjct: 136 NRLRLNIHDIESIKSFIEQINISESNTEFGNEILRNALFIQLMIFLNRIFLKNENMESTE 195 Query: 174 S---ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 + + K++ + +++ ++D E S+ L ++F+ TG +I+ Y+ Q R+ Sbjct: 196 DVFYDETIKKVLNYINSNIDDKLSIDSISSEFFISKYYLMRKFKSHTGTSIHNYIVQKRL 255 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 A+ L+ + L +S++ +CGF D + F F + G++P + Sbjct: 256 ILAKSLITNGYL-MSEVCNKCGFNDYSSFVRAFKKNYGVSPKNY 298 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 100/248 (40%), Gaps = 9/248 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H+H F EL V +G G + + + D I+ + H+ S + L+ I+ + Sbjct: 38 HSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPLEYIVIAIDG 97 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 + + + + + + + ES ++M + L Sbjct: 98 ISFEIPEDSLKDYISCNYANYKN--------EILFYLNLMVKESQAKNELYDDMCQQLMQ 149 Query: 154 QLVMLLNRHRYTSDSLPPTSS-ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 L++ + R + SL + + + + + LD ++ ++ L + Sbjct: 150 VLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKFYLAHE 209 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+ G++ YL Q R+ ++YLL+ + L IS IST GF +YF+ F + T +P Sbjct: 210 FKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKSTNFSPL 269 Query: 273 QWRHLNSQ 280 Q+R + + Sbjct: 270 QYRKNHQK 277 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 12/249 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL V G G + + + I GDL I +H+ SV L+ + ++ Sbjct: 37 HTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGKSLEYYVIGIDK 96 Query: 94 LKLNLDW-QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE-LL 151 + + Q I F Q + + Q+ +E + + + LL Sbjct: 97 ISFLAENGQTGIQAFCNFRDQ----------SSVSDIFAQMLYEMRNDDYGSEIICQNLL 146 Query: 152 FGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 ++ ++ R S+ ++ L + LD ++ + Sbjct: 147 EILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKYYMAH 206 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F + G++ QYL + R+ A LL+ + +SDI++ GF +YF+ F + GMTP Sbjct: 207 SFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYYGMTP 266 Query: 272 SQWRHLNSQ 280 Q+R N++ Sbjct: 267 LQYRQQNAE 275 >UniRef50_C6BWQ4 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWQ4_DESAD Length = 296 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 4/257 (1%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 DV H H+F + V G+G V++ Y I G L+++ H + N + ++ Sbjct: 35 DVQEAHLHEFYVVHYVSAGSGSCVIDFETYDIIPGSLYFVSPGQLHLWNPENIVDGFVMV 94 Query: 89 YCPERLKLN---LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + LK + + FN+ P + L + A+ V+ L E S P Sbjct: 95 FTDDFLKSPEAPIHSAYELEFFNSVINSPMFMLSTDQKAELGSVMSSLCREFSSKKPGFE 154 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRLAASLKSPFALDKFCDEASC 204 + F L++ L R P ++ + ++A + + + + Sbjct: 155 TVLRSYFHILMVCLQRMFADRMQRPGARVENPMVREFKKLVSAHHSPQLRVQDYAERMNV 214 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S L ++ T MT Q +R + A+ +L +S +S+I E FED +YF F Sbjct: 215 SVSRLSAVIKEVTSMTPGQIVRNELINTAKRMLANSDKNVSEICYELKFEDPSYFGRFFK 274 Query: 265 RETGMTPSQWRHLNSQK 281 RETG TPS +R K Sbjct: 275 RETGFTPSVFREHVRGK 291 >UniRef50_D2PMT4 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PMT4_9ACTO Length = 314 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 12/275 (4%) Query: 17 QQAVAVADRY-PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 +A A RY +D A HTH F E+ +V G+G+H+ R+T GD+ + H Sbjct: 17 DGTLAYAGRYLHEDSHAVHTHSFFEVAVVIGGDGVHLSLAGRQRLTTGDVVLLRPGVWHG 76 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW----------RLGSMGMAQ 125 Y +DL L N + + ++ L W P + L + +A+ Sbjct: 77 YEDCHDLRLYNCCFSADLMQRELAWTREDPLLGYLLWTGPFSAQRRGMLTTHLDAGTLAE 136 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-RYTSDSLPPTSSETLLDKLITR 184 + LE V ++ L R DS + + + R Sbjct: 137 LLDHLDGLEQLRDHPVSLHRGDIVGRLSLVLSCLARAVADAGDSRGDGHTHPAVLDAMRR 196 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + A + L + DE + L + F+ TG+ YL + RV A + L H+ I Sbjct: 197 MEARPAYQWTLTELADELHLAPGYLVRLFKSATGLPPMAYLSRHRVELAAHRLLHTDEPI 256 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 S I G+ D NYF+ F G++ S +R L S Sbjct: 257 SRIGEAVGWPDQNYFARRFKSHFGLSASNYRALFS 291 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 13/257 (5%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 ++ H H++ EL + G H+ +D Y + G+ H + + + + Sbjct: 17 DNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRL 76 Query: 88 I--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + E + A+PG Q W S + ++ L E + ++ Sbjct: 77 VLYFTKEMI--------AVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSE 128 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 E + Q+++LL R+ S ++ + +I L + P L++ ++ S Sbjct: 129 EALYFILNQILILLLRN---STETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLS 185 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 L ++F++ T TI QY+ +RV HAQ L + +++IS GF + +F+ V+ Sbjct: 186 PYYLCREFKKYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRS 245 Query: 266 ETGMTPSQWRHLNSQKD 282 TG++PS+ R ++ Sbjct: 246 VTGLSPSKSRKQAKERS 262 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 106/284 (37%), Gaps = 10/284 (3%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M Q+K+ ++D +A + F+ H H EL G+ +N Y Sbjct: 1 MEQQMKMFQEDRNLPFSVYIAQ-----DEKFSWHCHKHMELDYCSEGHCTIKVNGESYDC 55 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLD---WQGAIPGFNASAGQPHWR 117 GD IH + H+ +D L + L + F +G+ R Sbjct: 56 QPGDFVIIHTMEDHTLIRNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRR 115 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL 177 + + ++ ++ E + P + +L L R + + + L Sbjct: 116 IRVPKGSLLESILSEILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDL 175 Query: 178 --LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + +I + +++ ++ A S + F++ G T +Y +R+ A+ Sbjct: 176 ERIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEK 235 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 LL + I++I+ E GF YF+ VF +ETG P+ +R Sbjct: 236 LLITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=Enterobacteriaceae RepID=A4WEG5_ENT38 Length = 279 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 104/284 (36%), Gaps = 14/284 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M K + + V+ + + V H H E++ V G G+ ++++R Y + Sbjct: 1 MREMPKSDHLELITLNDTIVSFSRLFANTVRYHHWHQCLEILYVEEGFGVAIVDNRHYTM 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAI------PGFNASAGQP 114 G LF+ H R ++LD + P + Sbjct: 61 RPGRLFFFPPFTLHKVMVDEQAEAIY-----RRTIIHLDHHAVLKVLRDFPQTQQRLQKL 115 Query: 115 HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS 174 R G +A + H S + P + L++ L P SS Sbjct: 116 SRRGGEAWVADMADCHPHIHHLFSGYHP---PLTSESVASLIISLFAMLPDDKDGAPGSS 172 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + +++ L + F+LD E S + ++F +TG I+ YL +R+ A Sbjct: 173 HGIASQVMFWLDEHYQQKFSLDALAGELGKSRSYVSRKFHAETGEKIHDYLNTLRLRKAC 232 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 L HS + DI+T GF D YF F + G TP Q+R + Sbjct: 233 ECLLHSNESVRDIATRVGFSDVTYFISAFKKGIGETPLQYRKNH 276 >UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MA57_9FIRM Length = 294 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 112/286 (39%), Gaps = 27/286 (9%) Query: 12 FFASDQQAVAVAD---RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 F+ +D ++V QD H H + ELV + +G+ H + GD F + Sbjct: 7 FYQADDSGISVEHWTGSMSQDA---HMHKYYELVFIEKGSCTHTFCKEDTLLLPGDSFLV 63 Query: 69 HADDKHSYASVNDLVLQNIIYCPERLKLNLD----------------WQGAIPGFNASAG 112 + HS+A + N + PE L + Sbjct: 64 RPETSHSFAIHEQTSIYNCQFYPEVLDEQFFSLVKELKADARGTQVLEKTPTSFQADINN 123 Query: 113 QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDS---- 168 Q L ++G ++ + + E+ + + +L++++ R R Sbjct: 124 QGIVHLDPNERMFLLSILGGMQKAQEKQESYY-ELLKRKYLELILIIYRKRSDQQFKNYY 182 Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 P ++T++ + + + ++ P ++ + + S R+ F+ TG+ +Y+ ++ Sbjct: 183 SQPKQNQTIIMRTLAYIEENIAEPIDFNELARDENLSTNHFRKLFKDVTGLAPVEYINRL 242 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 R+ A LQHS L +S+I+ G D NYFS +F G +P + Sbjct: 243 RITKACEHLQHSNLSMSEIAANVGIYDQNYFSRLFKNFMGCSPRHY 288 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 93/251 (37%), Gaps = 11/251 (4%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H+H F EL V G G ++ D+ + I++ DL I+ H+ S L + Sbjct: 36 PHSHAFTELFYVRDGQGDFLIEDQIFPISKDDLVIINPHINHTEISKGSPPLSYFTVGVD 95 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 L + + FN + L E + + + Sbjct: 96 GLCFSFNGHKEYRIFNCREKKTDLLFY----------FNSLFQELDRQSEGYETICSHML 145 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L++ L R + L + + L ++ LD + + ++ L Sbjct: 146 DILILQLRRITDSPFELITAQHPSKECAHIKRYLDSNYGENITLDHLSELSHLNKYYLSH 205 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 +F + G++ YL + R+ + LL+++ ISDI+ GF +Y S F + GMT Sbjct: 206 EFTKYYGISPINYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYLSQSFRKSCGMTA 265 Query: 272 SQWRHLNSQKD 282 +R L ++ Sbjct: 266 GTYRKLKKKRK 276 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 5/263 (1%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 V + +PQ H H+ EL+ + G +N+ GD+ +++ H Sbjct: 18 PAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHG 77 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 + D V + +++ L + + + ++ +L Sbjct: 78 -GTPYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLERLFA 136 Query: 136 ESSQHVPFANEMAELLFGQLV-MLLNRHRYTSDSLPPTSSET---LLDKLITRLAASLKS 191 L Q + +LL RYT+ S+ LL ++ + A Sbjct: 137 LMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTE 196 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 L + A S + F + TG T Y+ RV A LL I+DI+ C Sbjct: 197 KITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLC 256 Query: 252 GFEDSNYFSVVFTRETGMTPSQW 274 GF D +YF+ F + G++P Q+ Sbjct: 257 GFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 21/261 (8%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND---LVLQNII 88 H H+ EL+ V G L+ + +P+ GD+ ++++ + HS AS+N + ++ Sbjct: 32 PLHWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALV 91 Query: 89 YCPERL--------KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQH 140 + P L L + + + Q + R L E Q Sbjct: 92 FNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLR-----LAGEFEQK 146 Query: 141 VPFANEMAELLFGQLVMLLNR-----HRYTSDSLPPTSSETLLDKLITRLAASLKSPFAL 195 L L+R R ++ + +L+TRL + + + Sbjct: 147 PRGYELAVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTV 206 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 ++ S + F++ TG T QY+ R+ A+YLL+++ + ++DI+ E G Sbjct: 207 EQAASFVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSS 266 Query: 256 SNYFSVVFTRETGMTPSQWRH 276 N FS +F + G++P R Sbjct: 267 INSFSKLFRQLRGVSPRDLRK 287 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 104/257 (40%), Gaps = 10/257 (3%) Query: 27 PQDVFAEHTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLV 83 P F H HD E+++V G G+ + + Y + GD+ + H S N L+ Sbjct: 24 PNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGVLHEEQSSIDNPLI 83 Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 + + + DW +P R S + ++ + ESS Sbjct: 84 TYYCGFSLPKASPSEDWV------IPPDVEPVIR-SSRVFPEIEALMKMIVDESSIKEDG 136 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 ++ L +++LL R + S+ L +++ + + +L + Sbjct: 137 YEGISRYLINSVILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNFTQNISLKDLGRQFH 196 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 + + F+ ++ Y R+ A LL + + + +++ G+++ NYFS++F Sbjct: 197 VNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLGYDNPNYFSIIF 256 Query: 264 TRETGMTPSQWRHLNSQ 280 R TG++P+++R N Q Sbjct: 257 RRVTGLSPNRFRESNQQ 273 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 20/287 (6%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +K+++ Q++++A +P + H H+ ELVIV G G + GD Sbjct: 1 MKVVQRKIIHDAGQSLSLAH-FPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGD 59 Query: 65 LFYIHADDKHSY--------ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW 116 + I D H + + + + + P N+D A + Sbjct: 60 MTLIGPDIPHLHLCDSLTGKNGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRR 119 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-------DSL 169 + A RQ+ Q++ L+ L R + TS + Sbjct: 120 GVRYSDPALTRQIRKQVQRLDKGQGIGR----IRWLLALLDTLARSQETSLIASGPVRNG 175 Query: 170 PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + +D + L + L EA + L + FRQ+TG T+ +L +R Sbjct: 176 TALRRQETVDTVCRYLREHFRENLCLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIR 235 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 + +A LL +RL IS I+ E GF + ++F+ F TG TP ++R Sbjct: 236 IENACRLLLETRLSISAIAWETGFANLSHFNRQFKSLTGQTPGEYRK 282 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 16/250 (6%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H+H+F E + G+G + + DL ++ H+ S ++ I+ E Sbjct: 60 PHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEYIVLGIE 119 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 +K + QG I N+SA + L L HE P+ N + + L Sbjct: 120 GIKFQAEDQGYI-LLNSSAHKSDLHLY----------FNSLAHEMKSEQPYRNFVCQNLL 168 Query: 153 GQLVMLLNRH---RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 + ++ R+ + + S P + E + K + + + ++ ++ Sbjct: 169 NIIFTMILRNDAFKISIVSGPKLTRECNIAK--KYIEENYQENITIETLSSLVHLNKYYF 226 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 F++Q G + YL + R+ + +LL + +S IS GF +YFS F R T + Sbjct: 227 VHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNI 286 Query: 270 TPSQWRHLNS 279 TP +++ + Sbjct: 287 TPQEYKKMYK 296 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 14/278 (5%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + F + + H H+F E+ I+ G +++ + Y T G Sbjct: 1 MNYTNSRTFNPEILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGT 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 +F + +H + L L + P +A H L + Sbjct: 61 VFLFNPRTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSH--LHGAFLE 118 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD--------SLPPTSSET 176 +A Q++ +L H+ + + + L +L++ + R S Sbjct: 119 KAWQIVHELNHQEVE----SALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRN 174 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 L++ I L L++ + + L + F+ TG+ YL Q+R+ HA+ L Sbjct: 175 LVNHTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKEL 234 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 L++ L + +++ G+ED+ +FS +F + G +PSQ+ Sbjct: 235 LKNDSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 101/256 (39%), Gaps = 3/256 (1%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS-YASVNDLVL 84 Y V H H+ E++ + RG G ++ Y++ G+ ++++ HS + + Sbjct: 31 YRNGVVNPHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHSGLEMIKRSIG 90 Query: 85 QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 I++ L F + + ++ R I ++ + Sbjct: 91 YAIVFDLRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGY 150 Query: 145 NEMAELLFGQLV--MLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + L + + + + ++ + + +LD+ + Sbjct: 151 ELYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQV 210 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S+ L + F++ M+ +Y+ +VRV A LL ++ + +S+I+ ECGF++ +YF V Sbjct: 211 DMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKV 270 Query: 263 FTRETGMTPSQWRHLN 278 F + TP ++R N Sbjct: 271 FKKYMHTTPLKFRKQN 286 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 104/271 (38%), Gaps = 16/271 (5%) Query: 20 VAVADRYPQDVFAEH----THDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 V +R+ + H H+ E+V + RG + + P I D+ I + H Sbjct: 27 VKTIERFHDT--SWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHK 84 Query: 76 YASVNDLVLQNIIYCPERLK------LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 + ++ + I+ + + ++ + + + P L + Sbjct: 85 FIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVL 144 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT----RL 185 + ++ E + + LL +L +L++R + + +LI + Sbjct: 145 LNRILKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYI 204 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + + +L S + F+++ G++ YL ++RV A+ LL+ + IS Sbjct: 205 NNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRIS 264 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 DI+ GF + F+ +F + +TP Q+R Sbjct: 265 DIALSVGFSNQQRFNDIFKKYVKLTPLQYRK 295 >UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2W7_EUBE2 Length = 273 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 9/273 (3%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 +D F +D V + + H H+ EL+ ++ G+ + D Y + G L I Sbjct: 6 NDNFLTDIATVPPSYKMKHF----HEHNKWELMFIYSGSCTLYVGDEIYMLNPGGLALIS 61 Query: 70 ADDKH--SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 D H +Y + +D + + + LK D ++ + P + + Sbjct: 62 PDTAHMTTYLAGSDHTRYVLYFNNDELKWIAD-DSSLDIESIFHEHPVIHIPERRLDYIS 120 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT--SSETLLDKLITRL 185 +I ++ +E + + F +L++ + R + D++ + L+ K+I + Sbjct: 121 SIIQKISYEHNGVDSLSLSFIHSYFHELILFILRCQMYEDNVITKMDTGNELIQKVIEYI 180 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + + + + + SE L ++F+ TG +YL VR A LL ++ L I+ Sbjct: 181 IENYHNDITMAATAELFNMSESSLSKKFKAFTGFRFREYLINVRTHAAADLLVNTSLSIT 240 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 +I+ +CGF DSN F + G P +R + Sbjct: 241 EIADKCGFADSNTMGGTFKKIMGEAPGSYRKSH 273 >UniRef50_UPI0001C35DF5 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35DF5 Length = 318 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 17/279 (6%) Query: 11 DFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 +F D ++ +V +P H H F E++I+ H + +PY I D+ + Sbjct: 32 YYFDYDARSYSVNMEFP------HMHMFYEIMILLSPKAYHFIAGKPYSIINNDIVLLAP 85 Query: 71 DDKHSYA----SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 H +D ++ N + L + + FN P +R Sbjct: 86 AILHQTEYLPGPPSDRIIINFMVPKHLLLHPGGYDTILSVFNDPV--PIFRFDLERQKTL 143 Query: 127 RQVIGQLEHES--SQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL--- 181 Q+I QL S ++ N M F + + L + R + S ++ +K+ Sbjct: 144 FQIINQLTDLSRTTEDPAVRNMMIHNKFTEFLFTLYQMRKENLYEEYNSERSIKEKIYTI 203 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + +L D+ S L QF+ TG T+ QY++Q RV +AQYLL ++ Sbjct: 204 TNYIQTHYYEDLSLAYLADKFFISSFYLSHQFKLVTGFTVVQYIQQTRVKNAQYLLLNTS 263 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 L I+DI+ + GF + F+ VF R M+PS+++ +Q Sbjct: 264 LKITDIAEKIGFSSFSQFNRVFHRFCSMSPSEYKTFYNQ 302 >UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y024_CROTZ Length = 296 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 15/274 (5%) Query: 17 QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 V+ + Y + H H EL+ V G G+ +++++ Y + G LF H Sbjct: 23 DDIVSFSRLYANSIRYHHWHQCLELLYVEEGYGVVMVDNQQYTMRPGRLFIFPPMTLHKV 82 Query: 77 ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR-------QV 129 +V + R ++LD A+ A Q + RL ++ + AR + Sbjct: 83 -----MVEERERERYRRTVIHLDNHAALR-LLAPFAQRYARLEALSLRGARATVVDFADI 136 Query: 130 IGQLEHESSQHVPFAN--EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 L+H + + P ++ L + + PP +S L +++ + Sbjct: 137 HAHLDHLFTLYAPRLAKGRSEHEEVASFLIHLLSLLPETPAPPPRASNALSTQVMFWVEE 196 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + F+L + + S L ++F+Q+TG I+ YL R+ A LL+H ++DI Sbjct: 197 NYAQKFSLGALALKLNRSRSYLSRRFQQETGEAIHDYLTTFRLRKACELLRHHAYSVADI 256 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 + GF D+ YF F + G TP Q+R + Sbjct: 257 ARMTGFSDTTYFISSFRKRLGETPLQYRKSRKHE 290 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 110/250 (44%), Gaps = 8/250 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNIIYCP 91 H HD E++++ +G+G+ ++ Y ++ GD+ ++ H+ + ++ + +NI++ Sbjct: 44 HWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFKS 103 Query: 92 ERLKLN----LDWQGAIPGFNASAG-QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE 146 LK + + + P F+ S P + I +++H Sbjct: 104 SLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQL 163 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRLAASLKSPFALDKFCDEASCS 205 + Q++ L + + P S + +++ +A + + A++ + S Sbjct: 164 SIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFYS 223 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 + + F++ G++ QYL R+ A LL + I DI+ GF + +YF+ F + Sbjct: 224 KSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKK 283 Query: 266 ETGMTPSQWR 275 + G++P ++R Sbjct: 284 KYGVSPRKYR 293 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 99/252 (39%), Gaps = 10/252 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS-------YASVNDLVLQN 86 H HD EL++V G + ++ + Y + G+ ++++ + HS S + +V + Sbjct: 36 HWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFHS 95 Query: 87 IIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE 146 ++ + D + H R + ++ Q+ + Sbjct: 96 SLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASEL 155 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFCDEAS 203 + L ++ L S + P +++ +I + + P L K + A Sbjct: 156 TIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELAR 215 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 SE + F++ T + +Y+ RV A L+ + I +++ + GF +YF+ VF Sbjct: 216 MSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVF 275 Query: 264 TRETGMTPSQWR 275 + G TP ++R Sbjct: 276 RQRFGCTPREYR 287 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 8/253 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLVLQNIIY 89 H HD EL+ + G+GL LN R+ GDL ++ H + N L ++I++ Sbjct: 28 YNHWHDEMELIYIESGSGLVRLNKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFRSIVF 87 Query: 90 CPERLKLNLDWQG-----AIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 L ++ N + + ++ + P+ Sbjct: 88 DLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYY 147 Query: 145 NEMAELLFGQLVM-LLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 + LF +L + T S + K++ + + P + ++ Sbjct: 148 FVKLKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTAAELTALSN 207 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 SE + F+Q TG T+ Y+ +R+ A+ +L HS +++I+ E GF +++YF F Sbjct: 208 YSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYFIKKF 267 Query: 264 TRETGMTPSQWRH 276 + TGM+P ++R Sbjct: 268 QQATGMSPHKFRR 280 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 100/255 (39%), Gaps = 6/255 (2%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ-- 85 D H H++ E+++V +G ++D + + GD+ + + H + Sbjct: 27 DDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLLDKGKTVTTS 86 Query: 86 NIIYCPERLK--LNLDWQGAIPGFNASAGQPHWRLGSMGMAQA--RQVIGQLEHESSQHV 141 + +CP L + + F + +R QA + ++ E++ Sbjct: 87 ALYFCPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEIAKETAIAD 146 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 ++ E LL ++ ++R+ T+ + + + + A L L Sbjct: 147 LYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYIDAHLHEELDLKMLAAH 206 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A ++F+ G+T ++L+ R+ A+ LL+ + L I I+ CG+ +F Sbjct: 207 ACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACGYHSMPHFYR 266 Query: 262 VFTRETGMTPSQWRH 276 F TG TP+ +R Sbjct: 267 TFRAATGTTPAAYRK 281 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 105/256 (41%), Gaps = 10/256 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNIIYCP 91 H H+F E++ + +G G ++ + + GD+ I H + + +NI++ Sbjct: 39 HWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFSV 98 Query: 92 ERLKL----NLDWQGAIPGFNASAG-QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE 146 + + +LD + +P + + Q + +++ S+ + Sbjct: 99 DMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYHL 158 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFCDEAS 203 + + + +L + D + L++ +++ + + K ++ Sbjct: 159 ALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYCG 218 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 SE + F+ G++ YL R+ A LL + + ++ CGF + +YF+ +F Sbjct: 219 FSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRMF 278 Query: 264 TRETGMTPSQWRHLNS 279 ++ G+TPS++R ++ Sbjct: 279 KKKYGVTPSRYRETHN 294 >UniRef50_D1CHN4 Transcriptional regulator, AraC family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CHN4_THET1 Length = 296 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 100/259 (38%), Gaps = 11/259 (4%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLH-VLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN 86 H HDF E+ +++ G G+H + ++RGD F + H++ L + N Sbjct: 28 DAPCQPHAHDFLEIAVIFGGGGVHRTIRGDL-PVSRGDAFILWPQSWHAFLDCRGLEVYN 86 Query: 87 IIYCPERLKLNLDWQGAIP--------GFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 PE L+ L W P +A A H +L AR L S Sbjct: 87 CCVGPELLRRELAWLREDPVAGCIFGDDSHAEAEIVHVKLTEDDAEIARGHFEALLGLSE 146 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 E L L +L R + + P + +++ L A + L + Sbjct: 147 DSAFHRVERLGHLLLLLGLLARRFVAEAIAGRPKQ-HPAVSRVVQLLRAEADRDWTLREL 205 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 E + L + + Q G+ YL ++R+ A +LL + L I+ I+ E G+ D NY Sbjct: 206 AGEVALEPSYLVRLCKAQLGLPPMAYLARLRLERAAHLLLRTDLSITQIAAEVGWPDPNY 265 Query: 259 FSVVFTRETGMTPSQWRHL 277 F F G+ P+ +R Sbjct: 266 FCRRFRAYFGLPPTLYRKQ 284 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 7/267 (2%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F V+ +P+ H H E++ + G L LN ++ GDL +IHA Sbjct: 15 FDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGI 74 Query: 73 KHSYASVNDLVLQNIIYC-PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 H + D V + I++ LK+N I ++ + L + + + + V Sbjct: 75 LHGGTPI-DCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNL-ELQTVCN 132 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE----TLLDKLITRLAA 187 L +Q + + L+ ++ HR S TS +++ + Sbjct: 133 YLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQ 192 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 P L+ A + + + FR T + YL R+ + L + I++I Sbjct: 193 QYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEI 252 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQW 274 + CGF D +YF F + G+TP Q+ Sbjct: 253 ALNCGFNDISYFIKTFKKYKGVTPKQY 279 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 9/245 (3%) Query: 34 HTHDF-CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H HD CEL++V +G G+++++ R Y +G+L ++ H + L + YC Sbjct: 2 HEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNL--VTYCIA 59 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 L +D A G + A+ + + +E E+ H AN + L Sbjct: 60 IGGLRIDGLPADHLL--PDGYCPVQPLRQHFAEVQSLFDAIEKEAKSHAEIANYLTMALI 117 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 +L L + P TL + + + K L + L Sbjct: 118 TKLAAFLREEGLQEEQQTP----TLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHL 173 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+ + G++ +Y+ R+ AQ LL ++ + I+ I+ + G+ +SNYF VF MTP Sbjct: 174 FKAEIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPG 233 Query: 273 QWRHL 277 ++R Sbjct: 234 EYRRK 238 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 10/257 (3%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV-NDLVLQNII 88 ++EH H E+ + G+GL+ + Y GD+F ++ H + ++ + N+ Sbjct: 31 AYSEHKHTAFEISCILSGSGLYKTQNALYHFHAGDIFLYSTNEIHYIIEIFDNCDILNLH 90 Query: 89 YCPERLKLN----LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 + P + D + FN + A+ RQ++ ++E E ++ +P Sbjct: 91 FEPRFIWSPGNDLFDSKYLNIFFNHGDSFENCLEQDEDTARIRQLLLEIEKEFNEKLPDY 150 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSET-----LLDKLITRLAASLKSPFALDKFC 199 M ++ +++ L R+ S S LDK + + ++ S L+ Sbjct: 151 ELMVKVKVLTILVTLGRNFNFSIPQKALSQSRSQHLLQLDKALAYIDDNISSDIDLNTIA 210 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 A S F++ G+T +Y+ RV A + L + I DI+ +CGF ++ F Sbjct: 211 KTAHMSRSYFSTIFKEMNGLTPWEYIINKRVELAAHYLTSTDFSILDIACKCGFNNTANF 270 Query: 260 SVVFTRETGMTPSQWRH 276 + F + T +PS +R Sbjct: 271 NHAFKKVTRKSPSDFRK 287 >UniRef50_D1N111 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N111_9BACT Length = 293 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 109/294 (37%), Gaps = 21/294 (7%) Query: 1 MAHQ-----LKLLKDDFFASDQQAVAVADRY-PQDVFAEHTHDFCELVIVWRGNGLHVLN 54 MAH ++L + F+ D R+ P+ ++ +F +++ V G G V++ Sbjct: 1 MAHPAELPTVRLTSNRFWGGDFHFSIFTVRHTPESHPFQYCRNFWKIIYVLSGCGAEVID 60 Query: 55 DRPYRITRGDLFYIHADDKHSYASVNDLVLQ--NIIYCPERLKLNLDWQGAIPGFNASAG 112 Y + LF IH DD + D ++ NI++ PE + + P F Sbjct: 61 GVGYALRPDTLFVIHPDDVTRFELAGDSEIEICNILFLPELIAFGAPFLADYPDFMRIFD 120 Query: 113 ----------QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH 162 Q ++ + E +Q + L +L+ + R Sbjct: 121 PARKPEVGREQRERLYIQKADQSIAALVRAMLREFNQAQANYRSVIRLQLLELLCRIARQ 180 Query: 163 RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTIN 222 + + + + ++ L PF S + L + F + GM++ Sbjct: 181 --SDRKIRRSRGRAVAEQAADFLREHHSEPFEPAALAARFGVSRQYLHRVFSRTYGMSLG 238 Query: 223 QYLRQVRVCHA-QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LR R+ A + LL+H +S++ CGF D +YF +F G P + R Sbjct: 239 DALRDCRLTAAYRQLLEHPERTVSEVCYGCGFNDLSYFYRLFRARYGCAPGRLR 292 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 15/252 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H E+ + RG+G +++N Y GD+ I+++D H LV+ I++ P Sbjct: 36 HWHTALEINYISRGSGYYLINGTRYDFREGDILLINSNDLHRAFENEGLVMTIIMFDPAY 95 Query: 94 LKLNLDWQGAI--------PGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 L + + F+ + H L +G A I ++ E + P Sbjct: 96 FALEQRYDTELLIPFREIGMRFDNMLDRGHPILPRLGAA-----IEEMRCEFAGREPHYE 150 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSE--TLLDKLITRLAASLKSPFALDKFCDEAS 203 + Q + +NR+ + ++ + + A + P+ L + A Sbjct: 151 AVIRSQLVQFMAFVNRYFAKEQERRSSRIRGMEIVRLTLNTIEADIAYPWTLKELAAAAH 210 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S F Q G + YL Q+R+ A LL+ S I +++ GF + + F+ +F Sbjct: 211 LSPSRFSALFVQTVGTSPMDYLIQLRLSAAVSLLESSDKKIIEVAESAGFRNLSNFNRLF 270 Query: 264 TRETGMTPSQWR 275 + G PS+ R Sbjct: 271 KQHIGKQPSELR 282 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 12/261 (4%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI-- 87 F H HD E + + G+ ++ + + +T GD I H + + + Sbjct: 34 DFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSKISYVAL 93 Query: 88 IYCPERLKLNLDWQGAIPGFNA-----SAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 ++ ++ N I N + R ++G A+ + + Sbjct: 94 VFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSY 153 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD-----KLITRLAASLKSPFALDK 197 + + + + Y S +L + L+ ++I + + K+P ++ + Sbjct: 154 GFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKEVIKYIQTNYKNPISIKE 213 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 D A SE + F+ QTG T QY+ R+ A LL + L I++I+ E GF D + Sbjct: 214 LADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFGDVS 273 Query: 258 YFSVVFTRETGMTPSQWRHLN 278 YF F + ++P+++R N Sbjct: 274 YFIKTFKKFLSISPTKYRKSN 294 >UniRef50_C7PEC1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC1_CHIPD Length = 290 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 103/254 (40%), Gaps = 4/254 (1%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN 86 +++ H H+F + + G G H ++ + + + ++++ HS+ + Sbjct: 34 HENLRDAHKHNFYHVTLFTEGAGTHTIDFKTFTVKPYQIYFMIPGQVHSWQFEGKVDGYI 93 Query: 87 IIYCPERLKLNL---DWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 I + L+ L D+ P F + L ++ +L E Q Sbjct: 94 INFSFNFLQSLLQKPDYLEQFPFFTGDVDEAVINLPEQLHTPITRIFEELIREIEQPADM 153 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK-LITRLAASLKSPFALDKFCDEA 202 + +M ++L Q +L+ R + +P + +L K + + + ++ + Sbjct: 154 SVDMIQVLMLQAFILIGRLSFEKSPVPSNNYNYILLKNFQKLIEKNYTTLKLPREYAELL 213 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 + L GM+ + +R + A+ LL + I++I+ + GF D++YF+ Sbjct: 214 FITPNHLNALCNSTVGMSAGELIRNRIILEAKRLLVNKDSTITEIAYQLGFADNSYFTKF 273 Query: 263 FTRETGMTPSQWRH 276 + + TG TP ++R Sbjct: 274 YKKYTGQTPEEFRK 287 >UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CUK1_AGRT5 Length = 297 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 110/276 (39%), Gaps = 12/276 (4%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 +D+ + R P+ F H H EL + G+ + D GDL + + H Sbjct: 12 ADRSWLLFDRRLPEFPFNWHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGPNLPH 71 Query: 75 SYAS---VNDLVLQNII---YCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQA 126 ++ S +N + + + + ++ + + + G +A+ Sbjct: 72 AWQSHGLINAPGVHRAVVCWFTRDWIEGLIALTPELSAITPLLVESGHGICFGEDALAKV 131 Query: 127 RQVIGQLEHESSQHVPFANE--MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 + + L + + + +L L+ T+ + P + +++ Sbjct: 132 GERLATLHKIAPEQQILTLLGVLVDLARVSDRRPLSAGEVTASTAP--RDRARMQRVLNH 189 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + A ++ + A S+ L++ F++ T MTI+QY+ Q+RV A LL + L + Sbjct: 190 IHAHYIGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLAQTDLSL 249 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 + I+ E GF D+ +FS F GMTP +R Q Sbjct: 250 ARIAEETGFSDAAHFSRQFRAARGMTPGDYRRQFDQ 285 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 9/269 (3%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 + H H+ E++ V G+ +N + + + +I+A HS + N Sbjct: 29 FYEENLSSYSIPWHWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFLHSIHATN 88 Query: 81 D--LVLQNIIYCPERLKL--NLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL--- 133 D VL++I++ P + ++ WQ I + P+ L Q + + + Sbjct: 89 DGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVW 148 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRY--TSDSLPPTSSETLLDKLITRLAASLKS 191 + F + L ++++L H S+ + + ++ + Sbjct: 149 NRLYNTENGFEIYVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQYIQMHFSE 208 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 + A SE + + F + T NQYL+Q R+ A +L + + DI+ +C Sbjct: 209 TITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQC 268 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 GF+ S+YF+ F + G TP ++R + Q Sbjct: 269 GFQSSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_Q5WKX6 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKX6_BACSK Length = 289 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 7/261 (2%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN 86 P +H HD+ E+V V++G G ++ ++ +GD+ I + H + ++ + Sbjct: 29 PNRELPDHLHDWYEIVYVYQGKGTFFIDQNLFQAEQGDIITIPGNTIHRVIPTAENLITS 88 Query: 87 --IIYCPERLKLNLDW--QGAIPGFNASAGQPHWR--LGSMGMAQARQVIGQLEHESSQH 140 I + P L+ ++ W + F G+ ++R L AQ I QL E + Sbjct: 89 TAIFFSPVLLQRSVFWDSHSYLRLFEEGKGRKNYRHRLEPKNRAQLELYIDQLWEEEKEK 148 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSL-PPTSSETLLDKLITRLAASLKSPFALDKFC 199 +M LL Q+++ LNR+ S+ + + +++++ + +L++ L+ Sbjct: 149 RIDQRQMLALLLQQILLFLNRNCLKSEHVGHHNAGPVWINQVLDYIELNLENELELNNLA 208 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 A+ S + F++ GM + +Y+ R+ A+ LLQ + I+ I+ +CGF +F Sbjct: 209 KIAAVSPAHFSRVFKKLIGMNVTEYITTKRIIMAKNLLQKQKENIALIAEQCGFNSMPHF 268 Query: 260 SVVFTRETGMTPSQWRHLNSQ 280 F R T +TP+ +R ++ Sbjct: 269 YRTFKRLTSVTPAAYRSSFAK 289 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 13/247 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H E + V +G +ND Y + GDL +I+ADD H+ + +D N++ C + Sbjct: 28 HRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASD---DNLVLCLQH 84 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L PG + + + R + L E E Sbjct: 85 RFEELVNVSVAPGTSNPVLK-------ARLNDLRTTLAHLWWEQKYQPAHWQLATENGLA 137 Query: 154 QLVMLLNRHRYTSDSLPPTSSET---LLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 QL ++L R+ ++ P S + + ++ L A + P +L + SE L Sbjct: 138 QLQLILLRYFSSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLSETYLS 197 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 F+ +TG T+ ++L Q+R+ L + +++++ E GF F+ F RE T Sbjct: 198 HYFKDKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKREYQCT 257 Query: 271 PSQWRHL 277 PS++R Sbjct: 258 PSEFRQQ 264 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 91/249 (36%), Gaps = 8/249 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLVLQNIIYCP 91 H H E++ V +G G GD+F + H+ + ++ +NII+ Sbjct: 121 HWHKSMEIIFVKKGTGRIQTGRNMQEARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEV 180 Query: 92 ERLKLNL----DWQGAIPGFNASAGQPHWRLG-SMGMAQARQVIGQLEHESSQHVPFANE 146 E L D + +P + QP G Q + + E S Sbjct: 181 EFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQISACLRRAEELCSARERGYEL 240 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSE 206 + +L++ L R T L +++ R+ P + CS Sbjct: 241 GVKAALLELLLYLLRMC-PEAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSS 299 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 + F++ TG + YL + R+ A L+ + I I+ GFE+ + F+ F + Sbjct: 300 SHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKKR 359 Query: 267 TGMTPSQWR 275 G+TP +R Sbjct: 360 YGVTPRAYR 368 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV--LQNIIY 89 H HD E VIV G L + Y + +G+ +I+A H+ S N + L +I + Sbjct: 40 PWHWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSITF 99 Query: 90 CPERLKLNLD---WQGAIPGFNASAGQPHWRLGSMG--MAQARQVIGQLEHESSQHVPFA 144 P + ++D W + + H L S +A I + + Sbjct: 100 HPRLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFGY 159 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLITRLAASLKSPFALDKFCDE 201 QL++ L+ + P + L ++ + + D Sbjct: 160 EFQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIADT 219 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A SE + FR G+ QYL+Q R+ A L + I+ I +CGF+D++YF Sbjct: 220 AMISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVK 279 Query: 262 VFTRETGMTPSQWRH 276 F + TPS++R Sbjct: 280 TFREQKKCTPSEYRK 294 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 112/261 (42%), Gaps = 6/261 (2%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + + + HTH + E+ V +G+GL L+++ Y + DL ++ H+ Sbjct: 35 YITESKFDHEWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERG 94 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 + ++ + I+ E + + G + + ++ + + ++ +++ + + Sbjct: 95 IENVNFEYIVMGIEGVTYFSKEEDEEQGCSIAN---YYEYKHEVLFYLKTILFEVKTKDT 151 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 ++ + E+L L+ L+ R S P + + + A K LD Sbjct: 152 EYQSLCQNLLEVL---LINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTL 208 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + ++ + F+Q G++ Y+ Q R+ A+ LL + L IS+I+ GF +Y Sbjct: 209 SELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSY 268 Query: 259 FSVVFTRETGMTPSQWRHLNS 279 F+ F + T +P Q+R NS Sbjct: 269 FAQAFKKATLTSPLQYRKDNS 289 >UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EB0 Length = 294 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 12/257 (4%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 + +F H H++ EL +V G G + +++ ++ GDL I A H + ++ Sbjct: 43 EGLFQSHAHEYDELTLVLDGEGYYSSSEQNIKVAAGDLILIPARLHHGFVCTRPWQGISV 102 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHW----RLGSMGMAQARQVIGQLEHE--SSQHV 141 + +RL ++ + F+ +PH L M A QLE E S + Sbjct: 103 HFFHDRLPVHCQYL-----FHEIESKPHRIRSSHLHEDDMRWAEISFYQLEKEWNSKRQD 157 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 A M + F +++ R+R TS + E +L+ ++ + +S + +++ Sbjct: 158 IDAYNMMRIAFETTLLIFQRNRETSIRA-AGTDEVVLEAILKEIHSSYHTQITVNELAAR 216 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 SE LR++F + G++ QY+ +R+ A+ LL+ + I IS E GF S+ F Sbjct: 217 HFISESNLRRKFSESFGVSPKQYIINLRLMEAKRLLRQTDKAIESISAEVGFTSSSRFYE 276 Query: 262 VFTRETGMTPSQWRHLN 278 FT+ G TP +WR N Sbjct: 277 FFTKSNGATPLEWRKQN 293 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 104/289 (35%), Gaps = 20/289 (6%) Query: 8 LKDDFFASDQQAVAV-----ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITR 62 +D++F Q V +D F H H+ ++ G + + Sbjct: 3 NRDNYFNRKGQESFVDIFKKSDIKNGQNFPRHWHEHLQVYYFISGTAKLECGKNNFEVQA 62 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP------HW 116 DL ++ ++ H S +D N+++ R + + + + P + Sbjct: 63 NDLVIVNPNELHYLESTSD----NLVFYTIRFEPSFLFSNHVDLLQTKYLTPITLNRIEF 118 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-----RYTSDSLPP 171 + +++ ++ E + LV+ L R+ S+ Sbjct: 119 NNLIQNNTELTELVKKVLMEYFNKKIGYELAIKGYIYYLVVTLLRNHVQHILTQSELDDK 178 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 ++ + L K + S + F+Q TG T Y+ +R+ Sbjct: 179 EATLIRFQPAFELIEKKYNEKITLSKLANTVGLSVHHFCRSFKQLTGKTTTDYINNIRLD 238 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 + Y L+ + I++I+ CGFE+ NYFS +F + +PSQ+R+L Sbjct: 239 KSIYYLKQTDYNITEIALMCGFENGNYFSRIFKKYHSTSPSQYRNLYKN 287 >UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCV1_BACSK Length = 293 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 8/258 (3%) Query: 26 YPQDVFAE-HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 YP D H H CEL+IV+ G G V+N + I +G LF+ H A + Sbjct: 26 YPTDYNGYYHWHQGCELLIVFDGAGSVVVNQQMSPIKKGMLFFFQPFQLHHVAPASAAPY 85 Query: 85 QN--IIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL--EHESSQH 140 + + + P + L A+ F + + + ++ I L H+ Sbjct: 86 ERATLHFDPLHAEKRLTAYPAMAQFFRQLKNGYNQDPFIDFSEDYFYIRSLCDMHDKMAE 145 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLL---DKLITRLAASLKSPFALDK 197 NE AE L+ LL+ ++ PPT + ++++ + L PF L Sbjct: 146 AASINERAEREELLLIQLLSYMQHQLKGRPPTKKLRHIHYAERIMGWIEDHLTEPFNLSL 205 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 + S+ + + FR++TG +I YL R+ A +LLQ + L I +IS G + + Sbjct: 206 LAQDLYLSKSYVSKVFRRETGSSITDYLTARRMKEACHLLQTTSLPIDEISQRIGLTNVS 265 Query: 258 YFSVVFTRETGMTPSQWR 275 YF +F R+T TP Q+R Sbjct: 266 YFIQMFKRKTNATPHQYR 283 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 12/248 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 HTH F EL V G G ++ + + I + +L I+ +H+ S + L+ I+ Sbjct: 20 YPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIRHTEVSDKNSPLEYIVLGV 79 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 E L + + + E + + + L Sbjct: 80 EGLNFLIYNDKEYLNIQCEDFSENLDFY----------FHTILREMDEQKESYETICQNL 129 Query: 152 FGQLVMLLNRHRYTSDSLPPTSSE--TLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 L++ L+RH + + P+S + + ++ + LD + ++ Sbjct: 130 LEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLDTLAELTHLNKYYF 189 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 F + G+ YL Q R+ +Q LL + L + I+ +CGF S+YFS F + GM Sbjct: 190 AHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSSSYFSQCFRKICGM 249 Query: 270 TPSQWRHL 277 TP+ +R Sbjct: 250 TPTAYRKQ 257 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 5/269 (1%) Query: 13 FASDQQAVAVADR--YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 + + + +V+ R ++ H H E+ + G + DR I GD+ I Sbjct: 6 YDNGEGTFSVSYRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISP 65 Query: 71 DDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI 130 + H + + +I + + + + ++ Sbjct: 66 NILHRTTNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETML 125 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS---DSLPPTSSETLLDKLITRLAA 187 + E S+ P A L QL+++ RH +S P+ + +++ + + Sbjct: 126 QTMIAEMSEKKPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNS 185 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + +L ++ S L + F++ TG T +YL VR+ A+ LL+ S + ++ I Sbjct: 186 HYMNELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLI 245 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRH 276 + GF +F VF TG P +R Sbjct: 246 AKRVGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_C0CZ81 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZ81_9CLOT Length = 305 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 17/275 (6%) Query: 11 DFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 +F D+++ V + +H H F E+ I+ + H++ PY I GD+ + Sbjct: 27 YYFDYDERSFQVNMDF------QHFHSFYEIHILLAKSASHLVEGIPYSIHAGDIVLLRP 80 Query: 71 DDKHSY----ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 H + + ++ N +Y E L + + + F P +R A Sbjct: 81 SLLHKTIYPQGAPSRRLIINFLYPQEYLDSHPAFSRILEPFGQEI--PIFRFDQEKTAIL 138 Query: 127 RQVIGQLEHESSQHVP--FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL---LDKL 181 ++ Q+ S++ +P N M F + + L R + +P L + ++ Sbjct: 139 SDMLNQVFLLSTRSMPADILNTMVHAEFTRFLYRLWELRSFNVYVPEKFESPLSEKIYQI 198 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + +L+ ++ S L +FRQ TG T+ Y++ R+ AQY L ++R Sbjct: 199 TSYIHNHYSEELSLESLAEQFYISTYYLSHRFRQVTGYTLIHYIQMTRIRSAQYALINTR 258 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I+DIS CGF + F+ VF + G++PS +R Sbjct: 259 EKITDISAACGFTSFSQFNRVFRKFCGVSPSDFRR 293 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 11/250 (4%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H+H F E+ + G G ++ + ++ L I A H+ S + L + E Sbjct: 36 PHSHHFTEIFFIKDGTGRMLIENESLPVSSNSLVVIGAQVTHTEFSDPENPLDYYVLGVE 95 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 LKLN D + ASA P RQ + E E+ + Sbjct: 96 GLKLNTDKEPEYIHVPASANSPF----------IRQCFENILREMHNKQDRYAEICQHYL 145 Query: 153 GQLVMLLNRHRYTS-DSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L++ R + S + + +S K+ + + +S +LD + S S+ L Sbjct: 146 DILILYFCRKDHVSYEVVDAQNSSRECHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSH 205 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 +F + G + YL +VR+ A+ LL + I +I+ GF ++YFS F + +P Sbjct: 206 RFAELYGKSPIAYLNEVRLASARDLLLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESP 265 Query: 272 SQWRHLNSQK 281 Q+R + + Sbjct: 266 QQFRKSHRVR 275 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 111/252 (44%), Gaps = 9/252 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 H HD E++ V G ++ Y GD F + + H S V P Sbjct: 46 PVHWHDEFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFP 105 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL------EHESSQHVPFAN 145 + H + A+++ QL E++ ++ A Sbjct: 106 LKYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIYMAENDETESKITAQ 165 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK-LITRLAASLKSPFALDKFCDEASC 204 +++ Q ++ + + + ++ TS +++K +++ + + +L +F ++ Sbjct: 166 IKTKIILLQFILEMWKKGFVIEN--DTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHL 223 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 SE+ + + F++ +T++QY+ +R+ +A+ LLQ + L +++ + + G+++ +YF F Sbjct: 224 SEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFK 283 Query: 265 RETGMTPSQWRH 276 + G++P ++R+ Sbjct: 284 KAYGISPLKYRN 295 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 93/256 (36%), Gaps = 3/256 (1%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND 81 V + +P+ H H+ CE++ V G L+ +RI G I H ++ Sbjct: 24 VTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHGGTPKDN 83 Query: 82 LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL---GSMGMAQARQVIGQLEHESS 138 +++ L + + + S A+ VI + + Sbjct: 84 CRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAVIDAMLEKEP 143 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 + + G +V ++ + +I+ + + + L++ Sbjct: 144 GYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKNITLEEL 203 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 +E + + F++ TG T +YL R+ A L+ + + DI+ +CGF D +Y Sbjct: 204 ANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFNDYSY 263 Query: 259 FSVVFTRETGMTPSQW 274 F VF G+TP + Sbjct: 264 FIKVFKSMKGVTPRDY 279 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 113/278 (40%), Gaps = 11/278 (3%) Query: 13 FASDQQAVAVAD--RYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 F ++V RY + +H H+ E+ + G +++ Y GD+ + Sbjct: 8 FFGKCDGISVEQLIRYSRFNMNVKHFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILD 67 Query: 70 ADDKHSYASVND-LVLQNIIYCPERLKLNLDWQGAIPGFNA----SAGQPHWRLGSMGMA 124 + H+ S++D N + + D+ PG N + L Sbjct: 68 TNLVHTTCSISDEDKGYNRVILYIDYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRI 127 Query: 125 QARQVIGQLEHESSQHVPFAN---EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 + L HE ++ E+A + + ++ L ++ + E + Sbjct: 128 AFLNLYRDLRHELTKKNSGYQSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNI 187 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 L A+ ALD DE S+ + + F++ TG TI +Y+ +R+ A +L+ S Sbjct: 188 SAYLEANYTKELALDTISDELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSN 247 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 L ISD++ E GFE ++YF +F + +TP ++R + Sbjct: 248 LSISDVAAELGFESASYFERIFKKIMTVTPLKYRKTHQ 285 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 10/248 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH F EL+ V G G N + RGDL I +H+ S + L+ + + Sbjct: 37 HTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQNHPLEYYVLGIDG 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 + + ++ Q+ +E + + + L Sbjct: 97 ISFLSQKDRECAQVFCNFEHDP---------SIHELFRQMLYEIRTAQYGSQTICQHLLE 147 Query: 154 QLVMLLNR-HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 L++ + R + S+ ++ L ++ LD ++ + Sbjct: 148 ILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHS 207 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F + G++ QYL Q R+ AQ+LL+++ ISDI++ GF +YF+ +F + MTP Sbjct: 208 FTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPV 267 Query: 273 QWRHLNSQ 280 ++R +++ Sbjct: 268 KYRQEHAK 275 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 R Q H HD EL + G+ ++ + + GD +I++ H + Sbjct: 35 RVFQADIPWHWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCRE 94 Query: 85 QNI---IYCPERLKLNL----DWQGAIPGFNASAGQPHWRLGSMGMAQ-ARQVIGQLEHE 136 + + L +L D + P + + S ++ + + + Sbjct: 95 ARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGVEL 154 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL----LDKLITRLAASLKSP 192 S+ F LF +L + R +S P+ ++ + +++ + A Sbjct: 155 CSRKEEFFELRLRNLFSELWESIYRWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEK 214 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 ++ SER + F+ G+T +YL VR+ +AQ LL ++ I DI+ E G Sbjct: 215 ISVSSIAASIPISERECYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSILDIALETG 274 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 F S+YF +F +TP+Q+R+L+ QK Sbjct: 275 FGSSSYFGKIFRSHHRLTPAQYRNLSRQK 303 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 112/288 (38%), Gaps = 13/288 (4%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQD-VFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 + L+L + + V Q F H H E+ + G + +N Y++ Sbjct: 9 KNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQVNQNLYQL 68 Query: 61 TRGDLFYIHADDKHS--YASVNDLVLQNIIYCPERL----KLNLDWQGAIPGFNASAGQP 114 +GD +++++ HS ND + P + K ++D P N Sbjct: 69 GKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLNTDNFTS 128 Query: 115 H-WRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD-----S 168 +R G+ G ++++ ++ ++ + +L LL S Sbjct: 129 FVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQLPSGAG 188 Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 L + L I + +S P LD+ + S+ + F++ T +YL + Sbjct: 189 LAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQTPFEYLLRY 248 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 R+ + LL I++I+++ GF S+Y+S VF + G +P +++ Sbjct: 249 RIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKK 296 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 107/252 (42%), Gaps = 10/252 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLVLQNIIYCP 91 H H+ EL+++ +G GL +N Y + GD+ ++ HS + + + +NI++ Sbjct: 39 HWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFKS 98 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA------RQVIGQLEHESSQHVPFAN 145 LK + + F + + + + +I +++ + Sbjct: 99 SLLKSS-GYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRLAASLKSPFALDKFCDEASC 204 + Q+ LL + + P + + + +++ +A + ++++ Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 S+ + F++ GM+ QYL R+ A LL + I +I+ GF++ +YF+ F Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 265 RETGMTPSQWRH 276 ++ G+TP ++R Sbjct: 278 KKYGITPGKYRK 289 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 12/246 (4%) Query: 37 DFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD--KHSYASVNDLVLQNIIYCPERL 94 D + + G G + +N + +T GD F ++ + + + + + + Sbjct: 41 DHYLIHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVIYQADAQDPWEYTWVGFT---- 96 Query: 95 KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQ 154 D + + + P+ S G RQ++ + A EM L+ Sbjct: 97 --GSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMH-IYDARGTEFENALEMTGRLYTT 153 Query: 155 LVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFR 214 L + ++ + P S+ + + K I ++A+ P ++ S L + F+ Sbjct: 154 LALFVSA---ATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQ 210 Query: 215 QQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 G++ +YL R+ A YLL+HS L I+ I+ GF++S YFS F + G++P ++ Sbjct: 211 SILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSPKEY 270 Query: 275 RHLNSQ 280 R + Sbjct: 271 RSKYKK 276 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 8/248 (3%) Query: 36 HDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII---YCPE 92 HD EL+ V +GN + D + GDL I +H + V + + I+ Y Sbjct: 31 HDSYELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKAEFIVMGFYLKP 90 Query: 93 RLKLNLDWQGAIPGFNAS---AGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 K ++ I GF S P + + + + + E+ ++ + Sbjct: 91 ESKSKIEALKEIYGFLESLENISSPFYFIHIRKRSNVFFCLESILQEAKENKKGLLLYIK 150 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 + +L + + R + + + + + + + SE + Sbjct: 151 SI--ELFIYITREMNNLEIKKGFDYSKIAKFIKDYIDQNYMEDIKIGDIAKKLFMSESSI 208 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 + F+ Q G+ +YL R+ A+ L S L IS+I+ CGF F+ +F + TG Sbjct: 209 SRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCGFSSLQRFNDIFKKYTGC 268 Query: 270 TPSQWRHL 277 +P+ +R L Sbjct: 269 SPTHYRKL 276 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 15/287 (5%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFA--EHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 L K + F +V +P+ A HTH+F E++ V+ G+ ++ + GD Sbjct: 39 LKKAEMFFRGDNRFSVI-LHPKLAIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGD 97 Query: 65 LFYIHADDKHSYA-SVNDLVLQNIIYCPERLKLNLDWQ---------GAIPGFNASAGQP 114 L +++ H + D ++ NI+ P+ L+ +L + Sbjct: 98 LLFLNIQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSE 157 Query: 115 HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR-HRYTSDSLPPTS 173 + L + ++ E + PFA ++ E F LV LL R +R + + Sbjct: 158 KYLLFQENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIP 217 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + + +++ L+ L + + L ++ TG + ++ ++ A Sbjct: 218 GKAFVPEILQWLSNHYAGA-TLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREA 276 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 + L+ + L + IS + G++D+ YF VF TG TPS++R + Sbjct: 277 ERYLKETSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQE 323 >UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CXM1_PAESJ Length = 279 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 5/256 (1%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 +F H+HD+ EL +V G G + ++ +++ G L I H + ++ Sbjct: 26 DGLFISHSHDYDELTLVLDGEGYYSSPEQNIKVSAGSLILIPPGLHHGFVCTKPWRGVSV 85 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE- 146 + ER+ L + H +L A QLE E + + Sbjct: 86 HFNHERIP--LQSRYLFHAGYECNRIHHIQLAEEDTEWAEISYSQLEKEWKKDRSSMDSF 143 Query: 147 -MAELLFGQLVMLLNRHR-YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 + + F +++L R++ S + + +T++ +++ + A S + + + Sbjct: 144 NIMRIAFETVIVLFQRYQALFSQTAGGKNDQTVIHEVLKEIHARFYSQLTVHELASKHFV 203 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 SE LR++F + G++ QY+ +R+ A+ LL+ + I IS+E GF S+ F F Sbjct: 204 SESNLRKKFTEIVGVSPKQYMINLRMEEAKRLLRQTDKAIESISSEVGFTSSSRFYDFFV 263 Query: 265 RETGMTPSQWRHLNSQ 280 + G+TP +WR N + Sbjct: 264 KSVGVTPFEWRKQNMK 279 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 101/261 (38%), Gaps = 16/261 (6%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA---SVNDLVL 84 ++ H HDF E ++ G G ++ + Y + GD ++ H S L Sbjct: 27 EEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKE 86 Query: 85 QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 I + K G P F + ++ Q+ + E+ + Sbjct: 87 CYIAFSGVSFKGCKS--GYFPSFKGNG--KIIKMADRMKKNIFQICTVMNKEARECSAGR 142 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSL--------PPTSSETLLDKLITRLAASLKSPFALD 196 M + Q++ L+ R + T + ++ +++ + + + +L+ Sbjct: 143 YFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLE 202 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ-HSRLLISDISTECGFED 255 + S + + F+ +TG T YL ++R+ A+ +L+ I +++ G+ D Sbjct: 203 QIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSD 262 Query: 256 SNYFSVVFTRETGMTPSQWRH 276 + +FS +F + G++P ++ Sbjct: 263 AYHFSKLFKKHYGISPLYYKK 283 >UniRef50_UPI0001788C94 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C94 Length = 315 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 110/261 (42%), Gaps = 18/261 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLVLQNIIYCP 91 H HD+ ++ V +G +H L + YR+ +G++F + H V +L + + P Sbjct: 48 HMHDYLQIWYVSKGEFIHTLYGQKYRMVQGNIFVLPPYSVHRVEMVPGKELEVLGCEFMP 107 Query: 92 ERLKLNLDWQGAIPG-FNASAGQPH----------WRLGSMGMAQARQVIGQLEHESSQH 140 + L+ P F+ S +P L ++++ ++ +E Sbjct: 108 AFINERLEGMPDEPQLFDLSFIKPFVTTEDRVPLKITLTGGSDLVVKELLTEMLNEFGGR 167 Query: 141 VPFANEMAELLFGQLVMLLNRH-----RYTSDSLPPTSSETLLDKLITRLAASLKSPFAL 195 PF + + + +L+ ++NR ++ S + + + + + P L Sbjct: 168 GPFFDILLKANLLKLLAIVNREHAEQSKHISVTAGSAPYREPILESVQYIHDHFDQPLWL 227 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 + C S ++F++ TG T +QYL R+ A LL L ++D+ + GF + Sbjct: 228 EDLCARTMMSRTSFCRRFKEVTGWTFSQYLANYRIRMAMRLLTEPELTVTDVCFKVGFNE 287 Query: 256 SNYFSVVFTRETGMTPSQWRH 276 YF +F + TG TP+ ++ Sbjct: 288 LPYFCRIFKKYTGTTPAYYKK 308 >UniRef50_D2B8S3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B8S3_STRRD Length = 302 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 99/258 (38%), Gaps = 11/258 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 H HDF E+ ++ G G HV + + + RG + + H + DL + N Sbjct: 28 EPHAHDFLEIAVIGSGYGRHVTSQGEHPLRRGQVIVLRPGAWHGFLDCADLTVANCCLSA 87 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA----------QARQVIGQLEHESSQHV 141 + L+ L IP G+ G+A +A IG LE + Sbjct: 88 QALRTELAALYDIPMLRRMLWTDPVASGTHGVAVTTVDPVAAEEAIAEIGLLERDLGADQ 147 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 + L L + L R P ++ + I R A+ P+ LD Sbjct: 148 GRPGRVLGRLVTVLGV-LADGRDPERETPESAIHPAVAATIARFEAAPAHPWRLDDLARA 206 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + L + F + G+T +L ++R A LL HS L + + G++D YF+ Sbjct: 207 VNLDPAYLGRLFGRHVGLTPLGFLARLRAERAATLLAHSTLPAARVGAAVGWDDPTYFAR 266 Query: 262 VFTRETGMTPSQWRHLNS 279 F G+TP+++R + Sbjct: 267 RFRTLVGLTPTEYRRRSR 284 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 11/259 (4%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV--LQN 86 D+ + H H+ E+ + G L N+R Y++ +G L + + H + D Sbjct: 25 DMRSNHFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTR 84 Query: 87 IIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE 146 II ++ K+ + + H+ + ++ Q + + E ++ + Sbjct: 85 IILYIDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRS 144 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---------LITRLAASLKSPFALDK 197 L+ +++ + L P ET + K + ++ +LD Sbjct: 145 YKALIEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDG 204 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 S+ L + F++ TG +N+Y+ +R A+ LL+ + L +S+I+ G+E Sbjct: 205 LAGVFYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESIT 264 Query: 258 YFSVVFTRETGMTPSQWRH 276 YF VF ++P ++R Sbjct: 265 YFEKVFKTYMSISPLKYRK 283 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 99/265 (37%), Gaps = 15/265 (5%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ 85 Y + + H H E++ V + G + D + GD+ H S + Sbjct: 40 YDRFTYPWHFHSQYEIIYVKKSCGRCFVGDCIECFSEGDVVLFGPSLPHYMRSDDAYHGD 99 Query: 86 N---------IIYCPERLKLNLDWQGAIPGFNASAGQPHW--RLGSMGMAQARQVIGQLE 134 N I + ++ + D + + R ++ Sbjct: 100 NPRLRVQGTIIQFEENFMQYSFDHYPQFHQIRVLLKEARRGVVFHTADAGAVRDMVSAFP 159 Query: 135 HE--SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 Q + + L +L Y PT+ +DK+I+ + ++ Sbjct: 160 ELKGFGQITGLLDLLQALAVSVPRRMLASPCYYEKF--PTAGNKRIDKIISFINSNYTRS 217 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 LD+ + A+ + + F+ TG T QY+ +R+ +A LL + IS I+ ECG Sbjct: 218 LKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVADMRIGYACKLLTIGDMEISQIAVECG 277 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHL 277 F+ +F+ F + TG+TP+Q+R+ Sbjct: 278 FDSIPHFNRTFKQLTGLTPTQYRNQ 302 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 105/272 (38%), Gaps = 17/272 (6%) Query: 18 QAVAVADRYPQDVFA--EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 Q + VA+ Y +V H HDF E+ I++ G ++ + + +GD+ + KH Sbjct: 12 QILYVANCYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHY 71 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 + + + L + P A + + + Q+ Sbjct: 72 DITEPGMTNAQLHIGFRNFTLEGYSRNTFPFKKA------FLRKKEEDSAILSISKQIIE 125 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSD--------SLPPTSSETLLDKLITRLAA 187 E P + + + QL++ + R S + L++++I + Sbjct: 126 EKDAEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEK 185 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 +L S + + F+++TG + YL ++R+ A+ LL++ + + Sbjct: 186 HHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQA 245 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQ-WRHLN 278 + G+ D+ YFS +F + G PS+ WR + Sbjct: 246 ANMVGYNDAYYFSKLFKKYYGFPPSENWRKSS 277 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 15/257 (5%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS--YASVNDLVLQNIIYC 90 H H E+ V G L ++ + G+ +I D H+ +++ Sbjct: 38 SHWHKEAEIFYVMEGEVLFQIDSEYIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFD 97 Query: 91 PERL---KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 L +L +G I F R+ S + + I ++ S Sbjct: 98 VGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAA 157 Query: 148 AELLFGQLV-------MLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 + ++ L NR R + + T L K+I + + P L + D Sbjct: 158 IKGHLFLMLFQAASSGRLANRSRSEAADMTRT---ERLKKVILYIQSHYHRPIRLSELAD 214 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 SE + F+ TG T Y+ RV A LL+ ISDI+ + GF +YF Sbjct: 215 LIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALDVGFGHISYFV 274 Query: 261 VVFTRETGMTPSQWRHL 277 VF + TPS++R Sbjct: 275 RVFRKIMNCTPSEYRKK 291 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 15/255 (5%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 F EH H+ ++ G G N + + I +GD+ I++ D H S+N+ + +I Sbjct: 33 FKEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLI-- 90 Query: 91 PERLKLNLDWQGAIPGFNASAGQPH------WRLGSMGMAQARQVIGQLEHESSQHVPFA 144 R+ L + + P ++ + + I + E ++ Sbjct: 91 --RIDLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGY 148 Query: 145 NEMAELLFGQLVMLLNRHRYTS-----DSLPPTSSETLLDKLITRLAASLKSPFALDKFC 199 + LV+LL R+ +++ K+ + ++ + Sbjct: 149 ELAVKANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLS 208 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 + A S + F+Q TG T +Y+ +VR+ + LL++S + I++++ CGF D NYF Sbjct: 209 NIAHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYF 268 Query: 260 SVVFTRETGMTPSQW 274 S +F ++ G++P+++ Sbjct: 269 SRLFKKKYGVSPTKF 283 >UniRef50_P54722 Uncharacterized HTH-type transcriptional regulator yfiF n=1 Tax=Bacillus subtilis RepID=YFIF_BACSU Length = 314 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 14/254 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F E+ V RG G ++ DR Y + +F + H S L L + + Sbjct: 44 HKHSFYEICYVVRGEGYYLEGDRTYPLREQTIFLSKPEHLHQIKSETGLFLFYVAFELSE 103 Query: 94 LKLNLDW--------QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + +W Q G+P L M QA Q + + E H+ A Sbjct: 104 DQSSAEWIKVMEEVKQSPFITMQLKDGEPPGLLWKTLMLQAAQPVNAFDKEILSHLSHA- 162 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 L+ + L + P +S LL ++ + +L P L S Sbjct: 163 ----LILSLIQTFLPYAQRPKQKQPIHTSSALLTEVKLHIKDNLSQPLKLTDVASHFHIS 218 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 R L + F + G++ +++++ ++ A LL+ + L I +I+ E GF +YF+ VF+ Sbjct: 219 GRHLSRLFAAELGVSYSEFVQNEKINKAAELLKSTNLSIKEIAEEIGF-SVHYFTRVFSA 277 Query: 266 ETGMTPSQWRHLNS 279 + G +P +R L Sbjct: 278 KIGSSPGLFRSLYK 291 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 105/260 (40%), Gaps = 8/260 (3%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 D+ + H H E+ G + + Y + G + I + H AS+ D I+ Sbjct: 61 DMPSFHIHHKFEIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQIHKTASLGDSPSSRIV 120 Query: 89 --YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ---ARQVIGQLEHESSQHVPF 143 + E L+ + F+ + + L ++ + Q + ++ Q+ + P Sbjct: 121 VNFSREYLEKVAAAFPEVDFFSFLTDERNHLLSAITVKQQNHIQSILQQMLDLEGETSPE 180 Query: 144 ANEMAELLFGQLVMLLNR---HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 + +L L++ L + S +++++ +A L Sbjct: 181 DQALRAMLLATLLLELKALCVQQQCQGGEKGRVSNHIVEQIQAYIAQHYAEKLTLTGIAS 240 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 + S L + F++ T +++ +Y+ VR+ AQ L++ S IS ++ + GF + +F Sbjct: 241 QFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNLIEKSGESISSVAGQTGFMTTAHFR 300 Query: 261 VVFTRETGMTPSQWRHLNSQ 280 VF TG++P Q+R + Sbjct: 301 RVFKDATGLSPQQYRQQYKR 320 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 103/284 (36%), Gaps = 19/284 (6%) Query: 6 KLLKDDFFASDQQA-VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++ FF DQQ V + + H HD EL V G G + D T GD Sbjct: 12 EVENHSFFFIDQQVEVNLEAKL-------HQHDAWELYYVVHGQGNRMAGDTLQPFTAGD 64 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 + I H + D + + + + + RL + Sbjct: 65 VVLIPPSMIHRWEYNADSTDEEGHVRYLMVAFS---HSLLERCIEVFPELRNRLSGVQFP 121 Query: 125 --------QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET 176 ++ ++I ++ E ++ A ++ + + + Sbjct: 122 TDALKFGLESSRIIRRILSEINEMDELERLSAMFRLLPVIFTSSDYTLAGKPMRIERDVR 181 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 + ++ + ALD +E + F++ GMT +Q++ Q R+ A +L Sbjct: 182 RMQQICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHL 241 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 L++++ +++I GF D +F VFT GM+P+++R Sbjct: 242 LKNTQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRKQYKN 285 >UniRef50_A9E084 Transcriptional regulatory protein, AraC-type n=1 Tax=Kordia algicida OT-1 RepID=A9E084_9FLAO Length = 287 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 2/255 (0%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 R + H HDF LVI +G G HV++ + IT G +F + H + D+ Sbjct: 31 RTHPFIEKPHRHDFHLLVIFTKGTGTHVVDFNTFDITAGSVFALQPGQMHHWNLSEDIDG 90 Query: 85 QNIIYCPERLKLNLDWQ--GAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + + E ++ + P + ++ P L A + E S Sbjct: 91 YILFHSKEFYNVHFQHKQINDYPFYFSTYNTPELCLNHQQTANVSSFFEMILTEYSSKSL 150 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 F + + + L+RH T L T+L L K + Sbjct: 151 FKEHAILNILDLIYIELSRHYVTPTQLQIKRYHTILRNFEVILEQFYKHEKKPSFYASRL 210 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 + + + L + R+ T + + A+ LL L I++I+ GFED +YFS + Sbjct: 211 NITLKHLNRICRETLDKTATTVITDRIILEAKRLLLTPELSINEIANLLGFEDYSYFSRL 270 Query: 263 FTRETGMTPSQWRHL 277 F ++TG TPS++R L Sbjct: 271 FKQKTGQTPSEFRSL 285 >UniRef50_B8I029 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I029_CLOCE Length = 294 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 10/281 (3%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M ++L + K + D + + DR F H HDF +++I GN ++ + + YR+ Sbjct: 1 MQNELGI-KRGYLEDDFKFFHLKDR-NNIQFEHHYHDFNKIIIFINGNVIYNIEGKNYRL 58 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQG---AIPGFNASAGQPHW- 116 D+ ++ A+ H D + I+ L + FN + + H Sbjct: 59 KLWDVLFVPANQVHKPIIAPDNEYERIVIWINNKFLEEHGTPKNDLLTCFNMAREKRHLV 118 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL---PPTS 173 RLG + + ++G LE E + +A LF Q ++ +NR D Sbjct: 119 RLGPNSLNNIKSILGNLEKELKNVTFGSGILANALFVQFMVYINRLYLKPDKQVEDIEVE 178 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + + K+I + +L ++ + ++ L +F+ TG +I+ Y+ R+ + Sbjct: 179 FDEQIQKVIHFINENLSDDLSIAALSERFYINKYYLMHKFKANTGYSIHSYVNNKRLQKS 238 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 L++ + S + ECGF D + F F++ GM+P ++ Sbjct: 239 ADLIKSGKSP-SYAAGECGFNDYSSFLRSFSKMYGMSPRKY 278 >UniRef50_A1A066 Transcriptional regulator n=5 Tax=Bifidobacterium RepID=A1A066_BIFAA Length = 323 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 113/290 (38%), Gaps = 32/290 (11%) Query: 11 DFFASDQQAVA--VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 + D QA V YP + H H E+ ++ G GL + + G + I Sbjct: 39 EIIVPDAQASVRWVKHGYPSSLAKWHHHPHIEIHLIREGTGLMMAGNAVVPYEAGQVALI 98 Query: 69 HADDKHSYAS---VNDLVLQN---IIYCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGS 120 ++ H++ S + + Q PE ++L + GF + L Sbjct: 99 GSNLPHNWVSDIAPGERLRQRDVVCHVRPETIRLLMSGFPETSGFAMVLRRAGQALVLSG 158 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS------------DS 168 QA ++ +E S L+ +L+ + S D Sbjct: 159 ESARQAGSILESMEEHS----------LACRVSDLIRVLDVFAHASADESYTVVASGYDP 208 Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 + +E++++ I +++ L +LD +A S + F++ G+ + ++R++ Sbjct: 209 AVCSGAESVVNDAIEYISSHLSGEISLDLAARQAGMSVSAFSRLFKRAAGIRFSDFVRRL 268 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 R+ HA LL + ++ I CG+ +++ F+ F ETG TP+ WR Sbjct: 269 RIGHACRLLTTTNQSVASIRRACGYGNASNFNRRFFEETGETPTGWRKKY 318 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 110/268 (41%), Gaps = 8/268 (2%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS--YAS 78 + YP H H+ EL+ V G + +NDR + D +++ H Sbjct: 28 GILSNYPDMKALCHWHEDIELIYVIEGEMNYRINDRDILLKEKDCLVVNSRQLHYGYAHL 87 Query: 79 VNDLVLQNIIYCPERLKLNLD-WQGAIPGF--NASAGQPHWRLGSMGMAQARQVIGQ-LE 134 + I++ P L + +Q + F N + H+ S Q + ++ + L Sbjct: 88 RRECRFICILFHPGLLNASPKIYQYYVAPFIENKNIAYFHYAADSANHEQVQALLNRILL 147 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT--SSETLLDKLITRLAASLKSP 192 ++ + + E L+ +L +H+ + P S TL K+++ + + Sbjct: 148 LKTEEKDAYELEAISTLYLLWRILFLQHKSLLEQEPAYDYSDLTLQKKMVSYIYEHYQDT 207 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 LD + S F++ + + + R+ ++YLL ++R I+ I+ CG Sbjct: 208 LTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYRLEVSRYLLANTRSSIAQIAVSCG 267 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 F +YFS +F RE G TP+++R Q Sbjct: 268 FNHLSYFSKLFCREYGCTPTEYRKAAHQ 295 >UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ86_9CLOT Length = 324 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 111/260 (42%), Gaps = 12/260 (4%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN-DLVLQNII 88 EHTH + E++ ++ G+ H+++ ++ D+ +I HS ++ + + I Sbjct: 61 DIPEHTHKYMEIIYMFSGSATHIIDKTEVKLEADDVLFIKQGTPHSASASGYNDIGIKIF 120 Query: 89 YCPERLKLNLDWQGAIPGF---------NASAGQPHWRLGSMGMAQARQVIGQLEHESSQ 139 PE L+ L N + + A+ ++ + Sbjct: 121 VLPEFLQYPLSMLNEDTALRRFIKKAAENDGKDKEFLHFHLQDLPDAQNLLENMTRSLLN 180 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD-KLITRLAASLKSPFALDKF 198 + + + G L+M L+ YT P+S E+ + + + + + ++ +L+KF Sbjct: 181 QTRNSKRILQATMGVLLMELSNRTYTITVGSPSSYESQIVLEALRYIEENYQTA-SLNKF 239 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 C+ + + + Q + T +YL++ R+ A YLL + I I E G+E+S++ Sbjct: 240 CEHHNLPCYYVSRLMTQYSPYTFTKYLQRRRILQAAYLLTETDTPIEQIVVEVGYENSSH 299 Query: 259 FSVVFTRETGMTPSQWRHLN 278 F +F E GMTP ++R Sbjct: 300 FHKLFKEEYGMTPKKYREKY 319 >UniRef50_A8U727 YfiF n=1 Tax=Carnobacterium sp. AT7 RepID=A8U727_9LACT Length = 302 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 15/259 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN---IIYC 90 H+H EL + G +++N++ Y + GD+ ++ D H + L I + Sbjct: 33 HSHQQYELYFFYGGECKYLINNQIYDLQPGDMLFLDGLDLHKAHVTGNKELYERSMIHFS 92 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ---ARQVIGQLEHESSQHVPFANEM 147 PE + L A+ F+ + H + + + ++I QL S Sbjct: 93 PEWILPVLQELDALFLFDTFSQLHHGLFHTSNVKETLEIERLINQLSLLSQATEVDNEAK 152 Query: 148 AELLFGQLVMLLNRHRYTSDSLP-------PTSSETLLDKLITRLAASLKSPFALDKFCD 200 AE L++ L + + ++K+ + L K ++ Sbjct: 153 AEAKAKILLIQLLFKVHELEKTTMLVLDKGNEGKYLYVEKIASYLQKYFKEVIYIEDISK 212 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ--HSRLLISDISTECGFEDSNY 258 + S + F++ TG T+ QYL R+ A+YL++ I +IS ECGFE + Sbjct: 213 ALNLSPSYISHTFKESTGYTVMQYLMDYRLIQAKYLIEVAGENKTIKEISRECGFESDAH 272 Query: 259 FSVVFTRETGMTPSQWRHL 277 F+ F ++ G+TP+++R Sbjct: 273 FNRFFKKKIGVTPNEYRKK 291 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 107/277 (38%), Gaps = 14/277 (5%) Query: 9 KDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 ++ + +Y A H H E++ +++G + ++ + + +G+ +I Sbjct: 18 HGNYEFPCAVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFI 77 Query: 69 HADDKH--SYASVNDLVLQNIIYCPERL----KLNLDWQGAIPGFNASAGQPHWRLGSMG 122 ++++ H + + + + ++ + +D + IP N Sbjct: 78 NSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINCKELSALELTEEDS 137 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT---SDSLPPTSSETLLD 179 + + + + + ++++ + R + + + Sbjct: 138 QKLIQGYFS-----YADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGSNNTDRERMK 192 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 ++T + + +L EA ER + F + G + +YL++ R+ A LL+ Sbjct: 193 YMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTAAELLRK 252 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 S L +++I + GF +YFS VF R GMTP ++R Sbjct: 253 SELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRK 289 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 9/257 (3%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 + + H H EL++ ++ Y + GD+ I H S V II Sbjct: 29 ENYPPHWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVIHELFSPPKGV--RII 86 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 + +++L + + A AQ +++ ++ E +++P+ Sbjct: 87 FLVSLAQIDLQELDLVISMISPAILISPEKFPQIHAQIHRLMLEIRDEYFRNLPYTESSI 146 Query: 149 ELLFGQLVMLLNRHR----YTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFCDE 201 F ++++L+ R + + ++K + + P +L++ Sbjct: 147 YAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYINEHYAEPLSLEEVASL 206 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A S+ + F+Q T +YL Q R+ HA++LL L + DIS +CGF + + F Sbjct: 207 AGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLDISLQCGFSNLSSFLR 266 Query: 262 VFTRETGMTPSQWRHLN 278 +F + TG TP++ R + Sbjct: 267 MFRKLTGFTPTELRKMY 283 >UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A1A9 Length = 309 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 9/262 (3%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 R+ + EH H F E V GNG ++ +R + + G LF +H S + Sbjct: 39 GFMPRHYDNT--EHKHSFFEACYVLTGNGTYIEGEREFHLYPGTLFLSRPGVQHQIRSKD 96 Query: 81 DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQH 140 L L + + PE + A A G P G+ + + + Sbjct: 97 GLALCYVAFEPEETATGEFYAAAFR-LLAKQGNPVVTEGARQASGLLWLSLLSLFHTGSG 155 Query: 141 VPFANEMAELLFGQLVMLLNR------HRYTSDSLPPTSSETLLDKLITRLAASLKSPFA 194 +M L L++ H S + ++ + + +L P + Sbjct: 156 KQHPPQMLNSLAASLIVSFLTVHGPGFHHEPSGAEANDEGTSMFHQAELFIKDNLNEPLS 215 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 L++ + R L + FR+ + Y+++ RV A+++L H+ I +I+ CGFE Sbjct: 216 LERVAGHLHITTRHLTRLFRKYGHQSFVHYVQEQRVQQAKHMLLHTDRQIKEIAVCCGFE 275 Query: 255 DSNYFSVVFTRETGMTPSQWRH 276 +YF+ VFT + G+TP+++RH Sbjct: 276 SVHYFTRVFTSKLGVTPARFRH 297 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 107/283 (37%), Gaps = 16/283 (5%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 LL FF ++ V + P +F H H E+ V G + ++ + GD+ Sbjct: 18 LLPYRFFHNE-----VKNGRPDILF--HWHPELEVTYVCEGTARYHIDYDFFNSQAGDII 70 Query: 67 YIHADDKHSYASV--NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ-----PHWRLG 119 I + HS + + N + + L L++ Q ++ + Sbjct: 71 LIRPNGMHSIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPH 130 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT--SDSLPPTSSETL 177 G + + + + + + + + + LL HRY ++ Sbjct: 131 MPGYDDIKACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTYRKNEK 190 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 + +LI + +D S+ F+Q TG + +++ QVR+ A LL Sbjct: 191 IRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELL 250 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 HS I +I+ E GF + + F+ F R +TPSQ+R ++ Sbjct: 251 IHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTK 293 >UniRef50_Q6MJ67 Putative transcriptional regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJ67_BDEBA Length = 285 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 6/266 (2%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 D +A + R V H HDF ++V+V G G H ++ Y I G +F + H Sbjct: 25 GDIRAERLEGRVKPAVPFPHRHDFFQVVVVAGGRGQHEIDFETYPIKAGSVFVVKPGQVH 84 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 + + + + E L L+ + + G H RL S AQ ++ E Sbjct: 85 RW-DLQGAKGYVLEFYVESLNLDAMDRELFQSLHELPG--HLRLSSA--AQQKEFYFYCE 139 Query: 135 HESSQHVPFANEMAELLFGQL-VMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 + + L L +++L+ R + ++ S L + + Sbjct: 140 KMCEEFLSRDQGYVSALKSHLNILILSLFRLSGRTVVKKSEGAFLGNFERLIELNFSRQH 199 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 ++ + S + L + + G + + + + AQ L ++ + ++++ GF Sbjct: 200 NVEFYAKALGLSPKALTMRVHRLLGKSAREMIHDRCLLEAQRYLGYTSMPVAEVGLALGF 259 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNS 279 +D NYFS F +TG +P +R N+ Sbjct: 260 QDPNYFSRFFKAKTGFSPGAFRDKNN 285 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 112/250 (44%), Gaps = 9/250 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F EL+ + +G G + + +L ++ + +H+ S + L+ I + Sbjct: 37 HAHHFTELLYITKGKGTFIFYKEEIPVQEHNLIIVNPNIEHTEKSDTNHPLEYIALGIQG 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 L + +I + + + + +Q++ ++E+ + + E+L Sbjct: 97 LSFS-----SIENPSPVTIHNYKQDQKNFLFYLQQLVEEVENHQEDYDLIIQNILEIL-- 149 Query: 154 QLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQF 213 L+ ++ + + + ++ + + +LD + ++ L F Sbjct: 150 -LLKMMRKKSFNVEKTSTQKINKDIEFIKNYIKQHFHENISLDTLASISHINKYYLSHSF 208 Query: 214 RQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQ 273 R+ G++ +YL Q R+ ++ LL+ + IS+IST GF ++F+ F RET ++PSQ Sbjct: 209 RKFVGVSPIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSFFAQSFKRETNLSPSQ 268 Query: 274 WRH-LNSQKD 282 +R+ +NS K+ Sbjct: 269 YRNAINSSKN 278 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 13/261 (4%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH-SYASVNDLVLQN- 86 D+ H H E+ ++ RG +R Y G+L + + H S++ V D + Sbjct: 36 DMRYNHFHQEYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHSIVGDPETEYE 95 Query: 87 --IIYCPERLKLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEHESSQHVP 142 I+Y + +D A + + + L A R++ Q+ E + P Sbjct: 96 RVILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQIMEELDKAEP 155 Query: 143 FANEMAELLFGQLVMLLNRHRYT-------SDSLPPTSSETLLDKLITRLAASLKSPFAL 195 + + R + + ++ ++ + +L Sbjct: 156 MSQTAILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFDAVYQISDYISDHFQERLSL 215 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 D ++ S+ L + F + TG IN+Y+ +RV AQ LL+ + L +S+I++ GFE Sbjct: 216 DSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVSEIASRTGFES 275 Query: 256 SNYFSVVFTRETGMTPSQWRH 276 Y VF + +TP+Q+R Sbjct: 276 ITYLGRVFKKYQHVTPAQYRK 296 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 9/268 (3%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 + D Y H H+ E++ + G +N Y +T+GD+ I + H + Sbjct: 18 LFFNDGYSNT--PHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKE 75 Query: 80 NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL--GSMGMAQARQVIGQLEHES 137 + +I + N L G+ A + I ++ +E Sbjct: 76 KKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINEY 135 Query: 138 SQHVPFANEMAELLFGQLVMLLNRH-----RYTSDSLPPTSSETLLDKLITRLAASLKSP 192 S+ + + L +L R+ + D +D + + + + Sbjct: 136 SKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQER 195 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 LD S+ + F++ TG+T YL R+ A++ + I++I+ CG Sbjct: 196 IDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCG 255 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 F F+ +F G TP ++R N Sbjct: 256 FNSIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 105/276 (38%), Gaps = 12/276 (4%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++ + D V + +D+ H H EL+ V +G ++ R YR+ D Sbjct: 1 MRYHYEFVETQDDLPVRLFVNSVKDIRF-HWHKEIELIYVLQGAVTVYVDQRQYRLAEDD 59 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 + I++ H N L N++ + LD +G + N+ + + R Sbjct: 60 IIAINSMSVHKLECTN---LDNVLLTLQFGPELLDDEGTLFDCNSMSQTEYNRY---RYD 113 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS-----SETLLD 179 + R+ + ++ ES++ P + L+ L R+ + P L+ Sbjct: 114 RLRRCLARMVWESNKKGPGHRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLN 173 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 ++I + L D+ S F + G+ +YL +R+ A L Sbjct: 174 RIIQYVDKHYNEKITLQTIADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSD 233 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + ++ I+ +CGF + F+ F + G TP +R Sbjct: 234 TDKSMTQIALDCGFANVKLFNQYFKGKYGSTPGSYR 269 >UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH74_9CLOT Length = 302 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 1/248 (0%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN-DLVLQNIIYCP 91 H H EL+ + +G +N + Y GDL D H S N D +L I++ P Sbjct: 28 PHYHREIELLYIRQGCAHVGINSQSYTCYGGDLVISQTGDMHYSNSENEDNILDFIVFEP 87 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 L+ ++ + + + V +L+++ Sbjct: 88 SVLETVYSNDRSLQSVLTAKELKKTGMDEIVQRMYSTVHSELKNQEMDFDTLIKLTLSEF 147 Query: 152 FGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 + + + R D P ++ L KL+ + + + +L + + Sbjct: 148 WVKYTRYFGQTRTAEDRQPMVTALAKLQKLMDYIEDNFANDISLSDAAEIMGYEVCHCSK 207 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F++ TG+ +YL V+V A +++ S I+DI+ CGF + F+ VF T MTP Sbjct: 208 VFKKLTGVNFTEYLNNVKVGKAIEMIRKSEYSITDIAMRCGFNNIRTFNRVFKSITKMTP 267 Query: 272 SQWRHLNS 279 + + + N Sbjct: 268 THFMNTNR 275 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 99/258 (38%), Gaps = 10/258 (3%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ-- 85 ++ F H H E V + G L+ + D+ Y + G+ +IH++ H+ S N + + Sbjct: 32 ENFFYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSFNGMPCEAC 91 Query: 86 NIIYCPERLKLNLDWQGAIPGFN-----ASAGQPHWRLGSMGMAQARQVIGQLEHESSQH 140 +++ P N + +++ +++ +L+ ++ Sbjct: 92 VVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEEWQRLVMKLLSELDDLKYEN 151 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRLAASLKSPFALDK 197 V + + ++ L ++ + + ++ + + K L Sbjct: 152 VSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENYKEEITLMA 211 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 SE F++ ++ Y+ + R+ + LL + I+DI+ GF + + Sbjct: 212 LAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIARNVGFNNIS 271 Query: 258 YFSVVFTRETGMTPSQWR 275 YF+ F + G +PS++R Sbjct: 272 YFNREFIKAIGCSPSKYR 289 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 16/264 (6%) Query: 27 PQDVFAE---HTH-DFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL 82 P+ E H H DF EL + G+ +++ Y + +G + + H + Sbjct: 25 PEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFEANT 84 Query: 83 VLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + + L L + + + + +++ + + +Q P Sbjct: 85 NCRELHIGLTNLNLFSNVKKDYIDIGNKNVLTFTKYKDEILKSCLEIVEE-QKTYNQTSP 143 Query: 143 FANEMAELLFGQLVMLLNRHRYTSD--------SLPPTSSETLLDKLITRLAASLKSPFA 194 F M + L +L++LL R D S + L++ + L + + Sbjct: 144 F---MLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDIS 200 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 L S + + F++ G + YL Q+R+ A+ LL S+L I I+ G+ Sbjct: 201 LYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGYS 260 Query: 255 DSNYFSVVFTRETGMTPSQWRHLN 278 D YFS ++ + G++P++ R+ + Sbjct: 261 DPYYFSKLYKKYYGVSPNKSRNAS 284 >UniRef50_Q11X77 Transcriptional regulator, AraC family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11X77_CYTH3 Length = 293 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 98/252 (38%), Gaps = 6/252 (2%) Query: 32 AEHTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 H HD F E++ + +G G ++++ + Y I +F++ H + D+ ++ Sbjct: 41 YPHRHDDFYEILFITKGTGTYIIDLQEYEIKPNTVFFLSPGQIHEISFSPDIYGYIFLFS 100 Query: 91 PERLKLNLDWQGAIPGF-----NASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 N + + F P + + + + + + E + + Sbjct: 101 SGFYLSNKNDPYKLFEFPFFYSLQYNNPPLYLTKASAIEELDSLFKKAILEVNTDALDSQ 160 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 E L +++ R +D L+ + + + ++ D + Sbjct: 161 EATHALLDLILIQCKRLYPQADGTQLKKGHILIKRFKQLIEEKCTENIGVKEYADMLHVT 220 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 L + ++ TG T ++ + LL H++L + +I+ + F D +YFS F + Sbjct: 221 ANHLSETVKEFTGRTPTDFINDRMTLEIKRLLTHTQLTVQEIAFQLHFSDQSYFSKYFKK 280 Query: 266 ETGMTPSQWRHL 277 +G++P+++R + Sbjct: 281 TSGVSPTEYRKI 292 >UniRef50_D2QTR3 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QTR3_9SPHI Length = 307 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 92/244 (37%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 HTH F ++ + RG+G H ++ + Y I L+++ HS+A D N+ + Sbjct: 47 SHTHTFYLVMWISRGSGTHTIDFKTYTIEPNQLYFLTPGQVHSWALSADTQGFNLFFDAN 106 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 K + F S A ++ E H P +++ Sbjct: 107 FFKGRFGSRLYQYPFFHSHQHQPLLSAIPQPALFTDLLAYAYQEYEAHQPNRSDVFLSFV 166 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 L+ +R + T + + L + + + + + + L Sbjct: 167 HILLETASRLYHEQQIGTDTYLYDRVRQYEELLENQFLTVREVSAYASQMNLTPNYLNHI 226 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 R G T +Q ++ + Q LL H+ I +I + GF D +YF F ++TG TP+ Sbjct: 227 CRLVVGKTASQLWQERLLIETQRLLTHTAQSIKEIGFQLGFNDPSYFVRFFKKQTGQTPA 286 Query: 273 QWRH 276 ++R Sbjct: 287 EFRQ 290 >UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZY9_PAESJ Length = 283 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 109/276 (39%), Gaps = 19/276 (6%) Query: 20 VAVADRYP----------QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 ++V +RYP Q H+H E+ G ++ D Y + G+L ++ Sbjct: 1 MSVQERYPLPIEAMYNTSQIPTDFHSHLEYEIYYFHSGKCKLLIGDSIYELAPGNLILMN 60 Query: 70 ADDKHSYASVNDLVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQPHWR--LGSMGMAQ 125 H + N + + P IP Q + L + A+ Sbjct: 61 GMTLHYPSIDNRYEYCRTVVHFDPAFASGLFQPPFLIPLLLPFERQTNRLISLKAEEQAR 120 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKL 181 ++ +L + P +++ L F +L++L+ Y S P + + KL Sbjct: 121 IEPLLERLCQLRQSNDPLSHDRLILCFQELLLLIYEFAHMPSYGQASPPGSIKHQNVQKL 180 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL-QHS 240 I + + LD D ++ L + F++ TG+T+ YL Q R+ A+ L + Sbjct: 181 IAYIEEHYREDLELDDIADYMHLNKHYLVKIFKETTGITLFHYLYQRRINQAKMLFTMNP 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I++ + E GF+ ++FS F + TG +P +R Sbjct: 241 DRSITETAFEIGFKYVSHFSQTFKKFTGQSPDDYRK 276 >UniRef50_D1N3N0 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3N0_9BACT Length = 336 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 15/257 (5%) Query: 33 EHTH-DFCELVIVWRGNGLHVLN-DRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 H H DF ELV+V++G+ + +T G++F + H Y ++++ NI++ Sbjct: 57 YHRHCDFYELVLVYKGSARNDSGTGTLETVTVGNVFLLPPGSIHRYQAIHEFAHFNILFR 116 Query: 91 PERLKLNLDWQGAIPGF-----------NASAGQPHWRLGSMGMAQARQVIGQLEHESSQ 139 PE L +PGF N +A P L + ++ E + Sbjct: 117 PELLNQIRFDLETLPGFQALFRNFGAAGNPTAISPFLFLPEAEITDVMMLLENCRRELER 176 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFC 199 P A F + + R +S + +++ +L + F++ + Sbjct: 177 QEPGFQSAAVASFLHALTGICRKARLQGGRGEENS-FRISRVVEQLNSRYSEEFSVPRMA 235 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 A S R +F + G++ +YL ++R+ A L I+ I+ GFEDSNYF Sbjct: 236 KLAGMSVSNFRHRFSEVMGVSPVEYLTRLRLKMAAPLFMMPE-NITSIAFRVGFEDSNYF 294 Query: 260 SVVFTRETGMTPSQWRH 276 + F + G+TP+++R+ Sbjct: 295 ARQFRKYAGLTPTEFRN 311 >UniRef50_A5W5M8 Transcriptional regulator, AraC family n=15 Tax=Pseudomonas RepID=A5W5M8_PSEP1 Length = 281 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 9/257 (3%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND 81 + RY Q FA H H+ ++ G + G + I+ D+ H+ A+ ++ Sbjct: 23 LHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPDELHTGATAHE 82 Query: 82 LVLQNIIYCPE--RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQ 139 + + PE R+ LD S ++ +A QL H+ S+ Sbjct: 83 AGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPALALA-----FSQL-HQLSE 136 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFC 199 A + ++ L+ RH ++ P + + L + L P +L+ Sbjct: 137 ASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALA 196 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 + S + FRQ TG+ + +L+Q R+ A+ +L+H L S ++ + GF D ++ Sbjct: 197 AAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHG-LAASQVAFDLGFADQSHL 255 Query: 260 SVVFTRETGMTPSQWRH 276 S F + G+TP +R Sbjct: 256 SRQFKQAYGVTPGAYRQ 272 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 118/270 (43%), Gaps = 30/270 (11%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV--- 83 + HTHD+ E+ IV G ++++D+ Y + +G++ I+ +H + + Sbjct: 25 SESHVTLHTHDYTEVKIVLSGYFKYIIDDKLYEVAKGNIIIINPGVQHEKIIPSGVKVEE 84 Query: 84 ----LQNIIY--CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHES 137 L NI + PE + ++P F QP + + I + +E Sbjct: 85 FNYGLTNIHFKELPENFLIEP---SSLPVFTLPLYQP----------EIIKCINETINEQ 131 Query: 138 SQHVPFANEMAELLFGQLVMLLNR------HRYTSDSLPPTSSE--TLLDKLITRLAASL 189 ++ P+ + + +L LL+R R L +SE +++ ++ L+ + Sbjct: 132 EKNEPYCDLFIKSSIMKLTALLHRGMTANKERTEKTRLDIQTSEKTNIVNDILEYLSTNY 191 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 +L + S + + F+++TG + +L ++R+ A+ LL + I ++ Sbjct: 192 MEQISLYRIAHNMYLSPVYISKIFKEETGESPINHLIRIRLTKARELLMSGNMPIKTVAR 251 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 G+ED+ YFS ++ + G+ PS + N+ Sbjct: 252 SVGYEDAFYFSKLYKKYYGIPPSMEKRSNA 281 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 96/256 (37%), Gaps = 6/256 (2%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 Q +F H H+ E++ G + GD+ I+ ++ H S +D + Sbjct: 30 QVLFNHHWHEHLEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHYGLSQSDHLFYYA 89 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRL-----GSMGMAQARQVIGQLE-HESSQHV 141 + L + F Q G+ +A +I +LE E + Sbjct: 90 LIADFSLLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSIIKELERQEFGYEL 149 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 +E+ LL L + + + + + + + ++++ Sbjct: 150 AIKSELYRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHYREDLSVEQLSGM 209 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A S + F++ +G T+ +Y+ + R+ A YLL+ S L +S+I+ GF D YFS Sbjct: 210 AGLSRFHFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAAATGFNDIYYFSR 269 Query: 262 VFTRETGMTPSQWRHL 277 F + M PS R Sbjct: 270 TFKKYKRMAPSALRKK 285 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 98/251 (39%), Gaps = 7/251 (2%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN---DLVLQNII 88 H H ELV+V + G ++ D ++ GDL + ++ H + N +L + Sbjct: 41 PWHFHPELELVLVKKSQGYRIVGDNITNLSAGDLVLVGSNLPHLWHQDNTAGELEAVVVQ 100 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 + + L + + L G + R V ++ Sbjct: 101 FVADFLGREFAGRSDFEPVRQLMDKARRGLHITGDVRDR-VADRMSAMVGLGPLRRLAEL 159 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 + L +S P + +D+++ + L P D+ A+ S Sbjct: 160 LSILDDLAHSPGVAFLSSPGFAPQLGLGDQARVDRVMQFIHKHLCEPINRDQVAAIAALS 219 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 + FR +TG T YL ++R+ A LL + L + D++ +CGF + +F+ +F + Sbjct: 220 PGAFSRFFRSRTGRTFPAYLNELRLGRAARLLSTTDLRVVDVAADCGFRNLAHFNRLFLK 279 Query: 266 ETGMTPSQWRH 276 G+TPS++R Sbjct: 280 WKGVTPSEFRK 290 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 12/246 (4%) Query: 34 HTH-DFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H H D E+++V G G ++ Y + GD+ + + H +++ + + + + Sbjct: 2 HQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVSD 61 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE--MAEL 150 +PG A+ + + + L H + Q + + + Sbjct: 62 F---------QLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQ 112 Query: 151 LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 L ++ L+ P E+L + + A + L E + + L Sbjct: 113 LTCAILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLA 172 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 FR+ G + QY+ + R+ AQ LL + I++I+ CG+ +SNYF VF R GMT Sbjct: 173 HAFREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMT 232 Query: 271 PSQWRH 276 P Q+R Sbjct: 233 PGQYRR 238 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 13/276 (4%) Query: 8 LKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFY 67 FF DQ+ P H HD EL V G G + D GD+ Sbjct: 14 ENHSFFFIDQRT------EPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVAL 67 Query: 68 IHADDKHSYA-----SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMG 122 I H + + D ++ ++ + + + P + ++ Sbjct: 68 IPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSME-VFPELRNRLADVMFPTDALK 126 Query: 123 MA-QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 ++ +VI + E + A ++ + H + + + + ++ Sbjct: 127 FGPESVRVIRKTLSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQI 186 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + ALD E + F++ GMT +Q++ Q R+ A LL+HS+ Sbjct: 187 CAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQ 246 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +S+I GF D +F VFT GM PS++R Sbjct: 247 KGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQ 282 >UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AFT7_9PORP Length = 289 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 94/264 (35%), Gaps = 10/264 (3%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY----- 76 + YP+D H H E+ V +G+G ++ D G++ + + H + Sbjct: 22 YSSLYPKDEMPLHFHPEIEICYVVKGSGYRMIGDFLEPFEEGEVVLVPTNQPHCWMYNPE 81 Query: 77 --ASVNDLVLQNIIYCPERLKLNLDWQGAIP--GFNASAGQPHWRLGSMGMAQARQVIGQ 132 + + P+ L+ L + SA Q L + + + + Sbjct: 82 SCEPDGKRRCIVVQFNPDLLQTGLSFFTEWEYAAHRLSAIQQGILLTGETAGKIKSCLEE 141 Query: 133 LEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 + ++ G L+ + T + + + + K Sbjct: 142 MNLLNASERMLMLIRILQQIGTTTDLIPIGLQETAFNGITKNMQRMQLIFKYVIEYYKEK 201 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH-SRLLISDISTEC 251 L + S S F+++TG T ++ + R+ LL++ I++I+ +C Sbjct: 202 ITLSDAANVISMSTTAFCSFFKRETGKTFTNFINEYRIEAVGTLLRNFPDKDINEIAWQC 261 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 GF D YF+ F + MTP QWR Sbjct: 262 GFTDIPYFNRYFKKMKQMTPKQWR 285 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 13/272 (4%) Query: 13 FASDQQAVAVADRYPQDVFA--EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 F+++ V + + ++ + HTH F EL V G+G ++ ++ + I + DL ++ Sbjct: 14 FSTEAVLVNASSSHYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNP 73 Query: 71 DDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI 130 +H+ S++ L + + + Q F+ Sbjct: 74 HIQHTEISLSASPLSYYTVGVDGISFSFHDQKEFQIFHYHQKHADLLFY----------F 123 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASL 189 L E + E+ + L+ L R + L P+ + + L + Sbjct: 124 HSLFQELDEKNDGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHY 183 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 L++ + ++ L +F + G++ YL R+ + LL+++ ISDI+ Sbjct: 184 SDDINLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAH 243 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 GF +Y + F + GMT ++R + Sbjct: 244 LAGFSSQSYLAQSFRKYCGMTAGEYRRSKKNQ 275 >UniRef50_C6D075 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D075_PAESJ Length = 295 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 9/252 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H + E+ V G G + D Y + G LF H S N + L + Y + Sbjct: 44 HKHSYYEVCYVLSGEGEYQDEDTVYGLEAGTLFVSRPGVWHQIRSENGVGLMYVAYELDP 103 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQ---HVPFANEMAEL 150 + + + G N +G ++ + +G H S Q + MA + Sbjct: 104 -EGSREEDFRRYGRNLESGNVVFKNADYTRS-IHYWLGLYHHASCQPYNEIEDLTMMAGI 161 Query: 151 LFGQLVMLLNRHRYTSDSLPPTSSET----LLDKLITRLAASLKSPFALDKFCDEASCSE 206 L LV + S P S+++ +L + + +L P +++ D + S Sbjct: 162 LLTSLVQPFGQEGNVSSPSPARSTDSTRYAVLRQSKQYIRDNLSRPLKIEEVADYMNLST 221 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 R L + F+ G T YLR R+ HA+ LL+ S + +I+ + GF+ +YF+ VFT + Sbjct: 222 RQLSRLFQMDGGDTFLSYLRNERLKHAEILLKTSLASLKEIAADSGFQSVHYFTNVFTEQ 281 Query: 267 TGMTPSQWRHLN 278 GM P ++R + Sbjct: 282 MGMPPGEYRRQH 293 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 21/262 (8%) Query: 15 SDQQAVAVADRY-PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + V ADRY + + H+H+ E+++V G ++VL + G + + A Sbjct: 2 NSDAVVYFADRYDSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMS 61 Query: 74 HSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 H + + +I+ + + D I P W + + AR L Sbjct: 62 HRQLNSGRVTTVYVIFEAQ--QECFDCSARILDVKGDRYAPGWFEQIVSLKTAR-----L 114 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 + E A+ + +L L NR + P + + + L + Sbjct: 115 DRE-------ADRLLGVLLSYLTGRENRLQREGGRSPAAA------RAMAYLEENYNRNI 161 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 ++ + + S L FR++ + L ++R+ A+ LL + L I +I +CGF Sbjct: 162 SVAEVANACGVSPSHLHLLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGF 221 Query: 254 EDSNYFSVVFTRETGMTPSQWR 275 +YF F + G TP ++R Sbjct: 222 NQPHYFCRAFRKIHGCTPGEYR 243 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 10/254 (3%) Query: 32 AEHTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC 90 H H+ F EL++V G G V++ +PY + G + H H S + + + Sbjct: 30 PLHRHETFSELLLVEEGRGTFVVDGKPYEVGPGTVLLYHRGIWHEEWSTH-YPFRATYFA 88 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGS---MGMAQARQVIGQLEHESSQHVPFANEM 147 + L++ Q F P LG + R+ + +L ++ AN + Sbjct: 89 FKDLQVKGCPQNY---FLGPDQAPVIELGEKTDETASLVRECLAELHSGLAESRAAANHL 145 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 LL +L L+ +++ +E + K + + + P L++ S+ Sbjct: 146 FGLLLARLARLV--PGESTERRIVKPAEAAVIKARGYIEENYQQPITLEQLAKVTFVSKY 203 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L F+Q+ G+++ Q+L Q R+ A+ L + + +I G++ F +F + T Sbjct: 204 YLSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKEIGELVGYQSEPTFHNLFKKVT 263 Query: 268 GMTPSQWRHLNSQK 281 G+TP Q+R +K Sbjct: 264 GLTPGQFRESAREK 277 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 16/258 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIYCP 91 H H+ E++++ +G+ + ++ Y GD+ ++ A H S DL I+Y Sbjct: 40 HWHEHFEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNS 99 Query: 92 ----ERLKLNLDWQGAIPGFNASAGQPHW--RLGSMGMAQARQVIGQLEHESSQHVPFAN 145 ++ +L + +P P RL A ++ Q E P Sbjct: 100 SLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDP-SCADYYYLLEQANSEFKAKQPAYQ 158 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK------LITRLAASLKSPFALDKFC 199 M + L+ LL+R ++ LP ++ + LI + A+ + Sbjct: 159 LMVKSQLHMLLTLLSR-KFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAA 217 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 + + + F++ TG T Y+ RV A+ LL L I++I+ G ++SNYF Sbjct: 218 RRMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYF 277 Query: 260 SVVFTRETGMTPSQWRHL 277 + ++ + G+ PSQ R Sbjct: 278 TKMYKKYKGVAPSQLRKQ 295 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 11/249 (4%) Query: 34 HTHDFCELVIVWRGNGLH-VLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H+H F EL+ V RG+G ++ I DL I+ + H+ S + L+ I+ + Sbjct: 33 HSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGLEYIVLGID 92 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 ++ Q A PG + + + + I + H + + E L Sbjct: 93 GVEF-YTEQNAHPGVSIHNYEDYKH-------EILFYIKAILEAGKTHDEMSELIVENLL 144 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLI--TRLAASLKSPFALDKFCDEASCSERVLR 210 LV+ R + + ++ D + L + LD ++ L Sbjct: 145 RVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFYLS 204 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 F++QTG++ YL + R+ A+ LL ++ L I+ IS GF +YFS F M+ Sbjct: 205 HIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMECMS 264 Query: 271 PSQWRHLNS 279 PS +R+ + Sbjct: 265 PSSFRNKHK 273 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS-VNDLVLQNIIYCPE 92 H H F E+ + GNG L D + DL I+ + H+ S +N L+ I+ + Sbjct: 37 HIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGID 96 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 +N + + H + + + E + + Sbjct: 97 NFSINFFNLNNEKFSQSDSKNYHVINLKKNSSIILNQLNLIIDEIKLKNYKYEVACKSML 156 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLD--KLITRLAASLKSPFALDKFCDEASCSERVLR 210 ++ + R + L L+ K+ L + L+ + + ++ L Sbjct: 157 SLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLDSHYSENITLETLSNLSYMNKFSLV 216 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 F +Q GM+ YL + R+ A+ LL+ + I DI + GF +S+YFS +F ++T ++ Sbjct: 217 HAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNLS 276 Query: 271 PSQWR 275 P Q++ Sbjct: 277 PKQYK 281 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 119/284 (41%), Gaps = 11/284 (3%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +KL +++ S V + + + F H H EL+++ G+G + + + GD Sbjct: 1 MKLYRENIIPSSNILVVKEEHFTVNEFPLHFHPEYELILILNGSGKRFVGNNIAEFSSGD 60 Query: 65 LFYIHADDKHSYASVN-----DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH--WR 117 L + + H+Y++ + D+ + + + L + A + + Sbjct: 61 LCFFGPNLPHTYSNKHIAGPRDIHQIVVQFNEDFLGKGFFDKAPFKPIRALLDKSIRGFT 120 Query: 118 LGSMGMAQARQVIGQLEH--ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 + + ++I + E++ + + + L LL+ ++S S S Sbjct: 121 FTGETLQEVTRMIRAMVEMDETAVVIQLLSVLYTLAKSAEFELLSSRGFSSKSDRAES-- 178 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + +++ + + + L+ A S + F++ T T +++L +VR+ HA Sbjct: 179 ERMGRVMDYILRNFREEIPLNVIASVACLSPEAFCRYFKKYTRKTFSEFLIEVRIGHACK 238 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 LLQ L ++ IS + GF + +YF+ F T TP +++ + + Sbjct: 239 LLQQQLLGVNQISMQSGFNNISYFNRKFKSMTKKTPVEYQKMFA 282 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 16/269 (5%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH-SYASVNDLVLQ 85 QD H H++ EL V+RG +H + R+ +GD ++ H Y V+ Sbjct: 66 YQDERLFHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVF 125 Query: 86 NIIYCPERLKLNL-----DWQGAIPGFNASAGQ-----PHWRLGSMGMAQARQVIGQLEH 135 NI+ E + ++ D + F Q +I + Sbjct: 126 NIMLSKEIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVE 185 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNR---HRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 E + + + + QL L R RY S ++T++ LI + L+ Sbjct: 186 EFIEDDLCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIH-LIYHMQQHLRQ- 243 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 +L+ + S + + FR + G + + L +R+ A+ LL+ + L + +I+ G Sbjct: 244 LSLESLAEAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIG 303 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 D++Y + +F ++ G+TP Q+R Q+ Sbjct: 304 VNDTSYLNKIFKKKYGLTPLQYRKQFQQE 332 >UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEI2_9ENTR Length = 289 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 116/247 (46%), Gaps = 11/247 (4%) Query: 34 HTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY--ASVNDLVLQNIIYC 90 H HD EL+ + G+G++ ++ R Y++ RGDL +A+ H A +DL++ + Sbjct: 41 HKHDDRFELMFIRAGSGIYNIDGRGYQVQRGDLLLFNANVLHDENPAPSDDLLIFSC--G 98 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAEL 150 E+LK+ Q + + A P + Q+ Q+ S F++E+ + Sbjct: 99 VEQLKVEGLPQNVLTTRHQVAVMP----SGEFYDEICQLFDQMWSHVSSKRLFSSEVGDN 154 Query: 151 LFGQLVMLLNRHRYTSDSLPPTSSETLL-DKLITRLAASLKSPFALDKFCDEASCSERVL 209 L +++LL R+ + + ++ TLL ++ + K AL + ++ L Sbjct: 155 LIS-ILLLLCRNIWIENKQDQQNNHTLLGQRIKDYIDDHYKDEIALKSITAALNMNQFYL 213 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 F+ +G + QY + R+ AQ LL + L +++++ G+++ N F +F G+ Sbjct: 214 AHVFKAYSGYSPKQYQTRRRIGEAQSLLLSTNLGVTEVANAVGYDNVNNFHRIFLNLIGI 273 Query: 270 TPSQWRH 276 P++++ Sbjct: 274 PPARYKK 280 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 106/267 (39%), Gaps = 8/267 (2%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 +V + + H H+ E++ + G + + +R+ GD I+++ H + N Sbjct: 32 SVYSSHAINRIPWHWHEELEVIFLPSGTLDVRVPGKRFRMNAGDCLVINSNILHEAETSN 91 Query: 81 DLVLQNIIYCPERLK---LNLDWQGAIPGFNASAGQPHWRLGSMGMA--QARQVIGQLEH 135 + L ++++ + + ++ ++ + +S + + RQ Sbjct: 92 ECRLHSLVFHTDLISGSDSSVFYKKYMYPLISSCTLDCVLFSAEDTSGVSIRQCFMMAFD 151 Query: 136 ESSQHVPFANEMAELLFGQLVMLLN---RHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 + + +L LL + + S P + ++I + + P Sbjct: 152 ALANNREGYEFTVRECLSRLCFLLCTFYKPEISDTSAKPDQDSFRIKEMIHMIQSRYAEP 211 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 L A+ ER + F + G++ QYL + R+ LL ++ I++IST CG Sbjct: 212 LKLCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGALLLINTNKSIAEISTRCG 271 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNS 279 F+ + FS+ F R+ +P ++R N Sbjct: 272 FDSPSNFSLTFKRKYQCSPREYRKNNK 298 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 105/281 (37%), Gaps = 8/281 (2%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 KL K+ ++ + Q H+H+ E + V G+ ++ Y++ +G + Sbjct: 7 KLQKEPYY--PVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQI 64 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPER----LKLNLDWQGAIPGFNASAGQPHWRLGSM 121 ++ A +H + N+ + E+ + +L Sbjct: 65 IFLDAGTRHRLIVSERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLH 124 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 Q + +L E + + M +LL + ++ + + P + + + Sbjct: 125 DTDDTYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEP--DQQAYVKRA 182 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + + ++ + L++ F+ TG +I+++L R+ A+ +L+ + Sbjct: 183 LAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTD 242 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + I+DI G YFS F + TPS++R + D Sbjct: 243 ISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQYND 283 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 110/280 (39%), Gaps = 16/280 (5%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITRGDL 65 L DF + A R + A H H DF EL + G + ++D Y + GD+ Sbjct: 8 LTYSDF--NPTVFFASKMRVTKRT-AYHAHQDFTELTYILSGTSKYRIDDIYYDVKAGDM 64 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW-RLGSMGMA 124 + H ++ + +C + ++ + Q H L S Sbjct: 65 IVCNPGVFHQNMLLDGEE-PLVEFC--TGFTDFQFKNMPENTIQLSNQGHIVHLSSEAKR 121 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT-------SSETL 177 + ++ + E+ M + Q++MLL R + + S Sbjct: 122 ETSRLCYDMLAENEAGQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGCNFETYSKSYA 181 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 + ++I L + + +LD+ S + + F+++TG + YL ++R+ A+ +L Sbjct: 182 VKRIINYLMENYEHKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLEKAKEIL 241 Query: 238 QHSR-LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I +I+ E G++D +FS +F + G++P +R Sbjct: 242 SEREGGSIKNIANEIGYDDVYHFSKLFKKYFGISPQNYRK 281 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 9/244 (3%) Query: 38 FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLN 97 F + V G G + Y + +G F I D +Y S + + + Sbjct: 40 FYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDEHHPWRYVWFG----FSG 95 Query: 98 LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVM 157 + + QP + G + V L H +S H M +L+ L + Sbjct: 96 RCAHDTLSSIGLTQNQPIFT-CEDGDKLKKYVFDMLAHNTSGHADHYRLMG-MLYLALSV 153 Query: 158 LLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQT 217 + N + D L S ++ I+ + P +++ D + F+Q T Sbjct: 154 IANAQK---DKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYT 210 Query: 218 GMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 GM+ +YL+ R+ AQ++L S L + I+ CG++ + F +F + TG++P+ +R Sbjct: 211 GMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYRLG 270 Query: 278 NSQK 281 Q+ Sbjct: 271 KRQR 274 >UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3J7_9BACL Length = 281 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 8/252 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA--SVNDLVLQNIIY 89 H HDF EL +V +G LH++N IT G L +I D H Y +D N+ Y Sbjct: 34 PIHCHDFYELFLVTQGQALHIVNGEAVPITEGTLVFIRPQDIHCYEKLQEHDCEFINLCY 93 Query: 90 CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 E + + G+ + + + ++ +LE + ++A Sbjct: 94 TREVIHEVFAFLGSSITPENLLSSVLPPVTLLSTGEKERLTDRLERINLVQDQL--QVAG 151 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLA--ASLKSPFALDKFCDEASCSER 207 LL LV LL ++ + + L+ L+ ++ + + + + + S Sbjct: 152 LLRAVLVELLIQYFWKYQQTDTKAYPLWLESLLLQMQRKENFSE--GVQRMYELSERSPG 209 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 + + FR T +Y+ ++R+ +A+++L +RL I+DI+ GF + +++ +F +E Sbjct: 210 HINRVFRSLLHTTPVEYINRLRLDYAKHMLVTTRLNITDIALSAGFNNLSHYYHLFKKEF 269 Query: 268 GMTPSQWRHLNS 279 G+TP +R+L+ Sbjct: 270 GITPLAFRNLHQ 281 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 113/279 (40%), Gaps = 6/279 (2%) Query: 9 KDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 ++ + +Y H H E++ +++G + ++ + +++GD +I Sbjct: 12 HGNYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKFILSKGDSLFI 71 Query: 69 HADDKH--SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 ++++ H + + V+ + ++ + + + + + Sbjct: 72 NSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKELSALELTKEDS 131 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY---TSDSLPPTSSETLLDKLIT 183 +++ Q + S ++ + + ++++ + R S + + + +++ Sbjct: 132 KKL-AQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDKERIKRMLA 190 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + + +L EA ER + F + G++ +YL + R+ A +L++S Sbjct: 191 FIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAEMLRNSEQP 250 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 I++I + GF +YFS VF R G TP ++R + D Sbjct: 251 IAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKNKVKSD 289 >UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAQ5_9CLOT Length = 329 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 117/263 (44%), Gaps = 17/263 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV-NDLVLQNIIYCPE 92 H HD+ E+V V+RG ++ D+ +++GD+ ++ + HS ++ + + NI+ Sbjct: 68 HNHDYYEMVYVYRGGCVNNFRDQEVILSQGDVLLMNPNVLHSIHTLREEDCVFNIMLSRS 127 Query: 93 RLKLNLDWQGAIPG----------FNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + ++ + + + Q S Q ++ L +E S P Sbjct: 128 LFEESMLLLLSDNKLLSNFIVSYLYQINTSQEFLYFPSPKNEQVDDIVTNLIYEFSDRGP 187 Query: 143 -FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD---KLITRLAASLKSPFALDKF 198 + + + L L LL R Y + T T L +I+ + + +L Sbjct: 188 TGSASVVQHLLAVLFSLLAR-IYAEQNQIHTDMHTKLSPLLDIISYINQN-SRTVSLAVL 245 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 ++ S S + + +Q G + Q ++ ++ A+ +L+++ + ++ E GF+DS Y Sbjct: 246 EEKFSYSAGYISRLIKQHCGQSFTQLVQNAKLQRAREILKNTGTSVVQVAEEAGFQDSQY 305 Query: 259 FSVVFTRETGMTPSQWRHLNSQK 281 FS +F + G+TPSQ+R L ++ Sbjct: 306 FSRLFKEKFGLTPSQYRKLCQEQ 328 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 105/266 (39%), Gaps = 7/266 (2%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + + R +H H CE+ GN ++ ++ Y+I G L IH D H+ S Sbjct: 17 TIDRSRRDSIYNMVKHWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFS 76 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEHE 136 + ++ E K Q + H ++ + + ++ ++ E Sbjct: 77 GKYIYHDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADE 136 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYT-----SDSLPPTSSETLLDKLITRLAASLKS 191 M E +L + + R + + L++++ + + S Sbjct: 137 VIHKEYNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYAS 196 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 +L++ + L + F++ TG TI +Y R+ +Q LL+ + I++I+ + Sbjct: 197 IHSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKS 256 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHL 277 G+ + Y++ VF + T +P Q+R Sbjct: 257 GYSNITYYNRVFKKYTETSPLQYRKK 282 >UniRef50_A3HVZ7 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVZ7_9SPHI Length = 288 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 12/270 (4%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 DR H H C+L ++ G G ++ D R GDLF + + H + S Sbjct: 19 YQEDRGMHFYNNLHQHPQCQLTVIIEGRGQLLVGDYVGRFEPGDLFLLGENIPHVFRSDA 78 Query: 81 DLVLQNIIYCPERLKLNLDWQGAIPGF-NASAGQPHWRLGSMGMA------QARQVIGQL 133 + + L D++ + L A++ I +L Sbjct: 79 EYFDEENKLSSSGNTLFFDFKAIEKSLGEVDEFRELIHLNEQINGCFKIEGTAKKSILEL 138 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET-----LLDKLITRLAAS 188 S + L+ + ++ + +P T S + +D+++ + + Sbjct: 139 FQNFSSCSGLEKLQKAIHMLSLIKVGSKEIIALNLIPVTRSLSERDGKRMDQVMRYILEN 198 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 P +LD+ ++A S+ + F+ +T T QYL+Q+R+ A+ LL + L IS IS Sbjct: 199 SAKPISLDEIAEQAYMSKEAFCRFFKLRTRRTFTQYLQQLRITEAKKLLLETDLGISQIS 258 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 + GF+ ++F+ F T TP WR LN Sbjct: 259 YQVGFQTLSHFNKTFKSMTNQTPKSWRKLN 288 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 103/257 (40%), Gaps = 10/257 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNIIYCP 91 H H+ E+ ++ G + ++ + + +GDL I HS + +V ++++ Sbjct: 11 HWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVSDSLVFHL 70 Query: 92 ERLKLNLDWQGAIPGFNASAG-----QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE 146 + L + I N P + G+ G + ++ L + Sbjct: 71 DFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGYEL 130 Query: 147 MAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 + L +L LL ++ + +E L ++++ + ++ + +++ Sbjct: 131 YTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLTIEELSSVCH 190 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S+ F++ GMT +Y+ R+ A L + + DI+ E GF + +YF+ VF Sbjct: 191 FSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNISYFNKVF 250 Query: 264 TRETGMTPSQWRHLNSQ 280 G+TP +R + + Sbjct: 251 KERFGVTPGSYRKNSRE 267 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 100/253 (39%), Gaps = 9/253 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 H HD E++ V G ++ Y GD F + + H S V P Sbjct: 33 PVHWHDEFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFP 92 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA--- 148 + + +++ QL Sbjct: 93 LKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSERELNITTQ 152 Query: 149 ---ELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK-LITRLAASLKSPFALDKFCDEASC 204 +++ Q ++ + + ++ TS +++K +++ + + +L +F ++ Sbjct: 153 IKTKIILLQFILEMWEKGFIVEN--NTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHL 210 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 SE+ + + F++ +T++QY+ +R+ +A+ LLQ + + +++ + G+++ +YF F Sbjct: 211 SEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQNISYFIRSFK 270 Query: 265 RETGMTPSQWRHL 277 + G++P ++R Sbjct: 271 KTYGVSPLKYRKK 283 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 96/250 (38%), Gaps = 6/250 (2%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H HD + V +G +ND+ + + G +I+ HS +VND + + Sbjct: 47 WHWHDEYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINID 106 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 + + I + + + I +L+ +V + + Sbjct: 107 KKLFSSFKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDIC 166 Query: 153 GQLVMLLNR------HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSE 206 L+ L + ++ + K+++ L L++ ++ Sbjct: 167 INLMQTLALVVKNALNPILLTTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQHIFLNK 226 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 + F+++T MTI +YL + R+ + LL HS IS I+ + GF +Y+ F + Sbjct: 227 NECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKN 286 Query: 267 TGMTPSQWRH 276 G+TP+++R Sbjct: 287 VGITPNEYRK 296 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 108/251 (43%), Gaps = 8/251 (3%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN--II 88 F H HD E++ + G+ +++ + T G F ++ + H Y NDL I+ Sbjct: 32 FPIHWHDELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGELH-YMGSNDLNADYYTIL 90 Query: 89 YCPERLKL-NLDWQGAI---PGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 + E + + D+ + P ++ H S A+ ++ +L + + F Sbjct: 91 FPLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEIYAEIISLLEKLIYINKYEKGFY 150 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 ++L +++ + +S+ ++IT + + L DE Sbjct: 151 QLDCKILLLEILSNILSIPDILVKKTSNASDMR-REIITYVNDNYLEKITLSDLADEFHM 209 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 SE+ + + F++ +T ++Y+ +R+ +A+ LL + + I+D++ GF + +YF F Sbjct: 210 SEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFK 269 Query: 265 RETGMTPSQWR 275 G TP +R Sbjct: 270 ESYGKTPFSYR 280 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 10/255 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIY 89 H H+ EL+ + +G + ++ + GD+ + HS + +NI++ Sbjct: 37 PLHWHNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDSCEYENILF 96 Query: 90 CPERLKLNLDWQGAIPGFNASAG-----QPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 + L + FN AG P + + I + ++ Sbjct: 97 NLDMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDGY 156 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFCDE 201 LN H YT +P S+ +DK ++ + + ++++ Sbjct: 157 RLKIRACLFNFFFELNAHFYTHTDMPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIAQW 216 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 S+ + F+ TG + YL R+ A +L+ + + ++++CGF++ +YF+ Sbjct: 217 CHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISYFNR 276 Query: 262 VFTRETGMTPSQWRH 276 F + G++P ++R Sbjct: 277 KFKEKYGVSPREFRK 291 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 102/278 (36%), Gaps = 12/278 (4%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 ++K ++ + + + + F H H E + V G +N+ + +G Sbjct: 36 KVKSFYQNWKLDPELPMDI-YQSTNITFYPHFHAEIEFIYVLSGTIRIGVNEEIRLLRQG 94 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYC-PERLKLNLDWQGAIPGFNASAGQPHWRLGSMG 122 D+ ++D H + S I+ C PE + + W P+ G+ G Sbjct: 95 DMVICGSNDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRF-----ASPYIPAGTPG 149 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT-----SDSLPPTSSETL 177 + + ++ +L E + P + + +L L R T + S Sbjct: 150 LETVKTILDELIREKDEKKPGYPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRRAR 209 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 + ++++ + + + S + F+ GM YL VRV A++ L Sbjct: 210 MQQILSYIEDHYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQL 269 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 S L I +I+ ECGF F+ VF G PS R Sbjct: 270 LTSDLSIMEIALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_UPI0001744EC9 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744EC9 Length = 291 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 105/290 (36%), Gaps = 10/290 (3%) Query: 1 MAHQLKLLKDDF-FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYR 59 M ++ +D + D+ + + P+ H H EL + G G + D Sbjct: 1 MWSAMRARLEDVQWGPDESFLVRSYNLPRFDVPWHFHPEIELACIVEGEGDRCVGDHLGA 60 Query: 60 ITRGDLFYIHADDKHSYASVN---DLVLQNIIYCPERLKLNLDWQGAIPGFNA-----SA 111 T GDL + + H + SV + R +P Sbjct: 61 FTVGDLVLLGPNLPHYWRSVGTGGKNQRARALVLHMRPTSLGQGFWELPECREWKQLLDV 120 Query: 112 GQPHWRLGSMGMAQARQVIGQLEH-ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP 170 + AQ + ++ LE E + + E+ ++L ++ Sbjct: 121 APRGLCFDPVISAQVQPLMESLESSEGTNRLLGLLEILQILAEGADSAVSLTGVGYSPDN 180 Query: 171 PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 + + + ++ L A L P +L + A S+ + ++ TG T+ + ++RV Sbjct: 181 DSRAADRMRRVYDYLYAHLAEPLSLPEIAQVARMSDAAFSRYCKKVTGRTLTSLINELRV 240 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 A L + +S+I+ GF+ + F+ VF GM PSQ+R + + Sbjct: 241 ARACKTLVETTQSVSEIAFLTGFQSLSNFNRVFADAKGMAPSQYRSRHHR 290 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 107/285 (37%), Gaps = 14/285 (4%) Query: 6 KLLKDDFFASDQQAVAVAD----RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 KL ++ ++ V Y F H H E + G+ ++ N+ + + Sbjct: 12 KLENREYARNNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVK 71 Query: 62 RGDLFYIHADDKHSYASVNDL--VLQNIIYCPERL---KLNLDWQGAIPGFNASAGQP-- 114 GD+ +++ + HS + ND I + P + K ++ I S P Sbjct: 72 AGDVIFVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFV 131 Query: 115 HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY---TSDSLPP 171 ++ Q ++ +LE + + E +L L R Y + + Sbjct: 132 YFEGSKKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQ 191 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 T + + + + + K LD + + S+ + F++ T YL R+ Sbjct: 192 TKNIMQIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQ 251 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 + L + I++ + GF S+Y+S +F + TP+++++ Sbjct: 252 RSIPYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKN 296 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 103/272 (37%), Gaps = 8/272 (2%) Query: 17 QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 Q+ V + D + + H H+ E++I V Y ++ ++ I + HS Sbjct: 17 QRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHLSEKEIIVIPPGELHSM 76 Query: 77 ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHE 136 + + + + + +P F+++ L AR+ I + E Sbjct: 77 PAQDGRRIIFQC-DNSVISEVPSLESILPVFSSAVHITP-SLNKELYVLARKNILDIYTE 134 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK------LITRLAASLK 190 P A+ + ++ + + S S+ D+ + + + Sbjct: 135 YYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDESRKFGLVTKYINQNYM 194 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 L+K A S+ + F++ M+ QY+ R+ A+ L+ S L I++++ + Sbjct: 195 YELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAERLMADSSLPITEVAMQ 254 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 CGF F+ F + G TP+++R L D Sbjct: 255 CGFSSLTTFNRAFRKAKGCTPTEFRKLFKIND 286 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 10/247 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F E+ G+G + I + L ++ +H+ + L+ ++ + Sbjct: 38 HHHNFAEIFYCLDGSGYLLTEFGRTPIHKHSLLLVNPFIEHTEHTSLISPLKYLVIGIKG 97 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 ++ L G + H Q ++I ++ E + P+++++ + L Sbjct: 98 PEIILPSHATDNGLFSFEDSNH---------QFYRLIREVMTECELNQPYSSQIIDHLIN 148 Query: 154 QLVMLLNRHRYTSDSLP-PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 L++ LN + ++ T + + L++ + A S L Q Sbjct: 149 SLILRLNNLANSQLAMARETPLSASVSLAKHYIDNHFSKNINLEQLEERAHVSRFHLAHQ 208 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 F+++ G++ YL QVR+ AQ LL + + I+ GF +YFS F GMTP Sbjct: 209 FKEELGLSPINYLNQVRLTQAQELLLTTNYTVLQITEMVGFNSVSYFSNKFHEAVGMTPR 268 Query: 273 QWRHLNS 279 +R+L++ Sbjct: 269 AYRNLHA 275 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 106/258 (41%), Gaps = 13/258 (5%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS-YASVNDLVLQNIIYCPE 92 H HD+ E++ V+RG ++V D R+ +GD+ ++ + H+ Y +D ++ NI Sbjct: 75 HRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFISNP 134 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR---------QVIGQLEHESSQHVPF 143 ++ + S + S + ++ E + PF Sbjct: 135 MIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLNFTDNSPDSILLTEKMIEEYIEQRPF 194 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLP--PTSSETLLDKLITRLAASLKSPFALDKFCDE 201 M + L L+R Y + S+ P + TL +I + + +S LD Sbjct: 195 YQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRS-ITLDSLAKH 253 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + L + RQ TG T +Q + Q ++ A + + + I DI GF D ++F Sbjct: 254 FQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVSHFIR 313 Query: 262 VFTRETGMTPSQWRHLNS 279 F +E +TP+++R S Sbjct: 314 SFKKEYHLTPAEYRKTFS 331 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 101/283 (35%), Gaps = 25/283 (8%) Query: 6 KLLKDDFFASDQQ-AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++ FF DQ+ ++ + H HD EL V G G + D GD Sbjct: 12 EVENHSFFFIDQRVTTSIEAKL-------HRHDAWELYYVVHGYGKRMAGDTLQPFAAGD 64 Query: 65 LFYIHADDKHSYA-----SVNDLVLQNIIYCPER------LKLNLDWQGAIPGFNASAGQ 113 + I H + + +D ++ ++ + + + + + G Sbjct: 65 VALIPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNA 124 Query: 114 PHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS 173 + G+ R+++ Q+ + + H + + Sbjct: 125 --LKFGTGSSQTIRRILSQMN----DMDELGRLCEMFRLLPAIFTSSDHTFAGKPMNIER 178 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + ++ + +LD E + F++ GMT +QY+ Q R+ A Sbjct: 179 DVRRMQQICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTA 238 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LL+HS+ +S+I GF D +F VF GM+PS++R Sbjct: 239 CELLKHSQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRR 281 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 8/260 (3%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLV 83 YP A H H E +++ G + +N + Y + G +I+++ H S + D Sbjct: 33 YPTMAAANHWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSDCN 92 Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL---EHESSQH 140 I++ P + + + + + R +I L ++ Sbjct: 93 FICILFPPSLISSITRIKETYILPVCEDTSNPFFILHPEITWQRNLIELLKNVYELCNEE 152 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT---RLAASLKSPFALDK 197 LF + L + S S+ T+ + L+ + + + + L++ Sbjct: 153 KDGFELHVMSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQKNYQKRITLNE 212 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 + F+ T YL + R+ + LL+ S L +++I+ +CGF S+ Sbjct: 213 IAAAGNVCRSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIALQCGFTGSS 272 Query: 258 YFSVVFTRETGMTPSQWRHL 277 YF+ +F + G TPSQ+R Sbjct: 273 YFTEIFHKTLGCTPSQYRRK 292 >UniRef50_C6D1V9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1V9_PAESJ Length = 279 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 10/266 (3%) Query: 21 AVADRYPQDVFAE--HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA- 77 R +D F E H H EL V G GL +++ + Y I L H Sbjct: 10 YEYRRTSRDYFREVFHAHSQMELTYVHEGRGLLIIDGKSYSIEPNTLLVFPPFQMHRIQI 69 Query: 78 ---SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 + +++ P L L+ ++ F + + + L Sbjct: 70 QVTEAEPFIRSVLLFEPAVLHGYLNDFPSLKSFFQRLMLQQANVHPVNAMPENEPFVALL 129 Query: 135 HESSQHVPFANE--MAELLFGQLVMLLNRHRYTSDSLPP--TSSETLLDKLITRLAASLK 190 + S + E E + L+ L+++ + + D ++++I + Sbjct: 130 RQFSITMGGKREADFEENMGVFLLSLVHQLKQSPDGESAYLKKHNLHVEEIIGWIEKHYM 189 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 PF L+ E S + F++ TG TI Y + R+ HA LL+ + L +S+I Sbjct: 190 DPFRLEDLAGELHLSPYHVAHLFKESTGTTIVAYTQATRIRHACSLLRKTTLPLSEIGYR 249 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRH 276 G + +YFS +F + G+ P +R Sbjct: 250 VGIANPSYFSKIFRQIMGVAPLTYRQ 275 >UniRef50_C7PJ33 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJ33_CHIPD Length = 285 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 117/267 (43%), Gaps = 10/267 (3%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 +AV++ + H+H F EL+ V G G H +N+ G+LF I DD H + Sbjct: 12 IAVSEPMDECPRPIHSHSFFELIYVVSGTGKHFVNESGLEYAPGNLFLIGPDDTHHFDIQ 71 Query: 80 NDLVLQNIIYCPERLKLNLDWQGAIPG----FNASAGQPHWRLGSMGMAQ-ARQVIGQLE 134 L + + + + + + + QP L G A+ ++ + Sbjct: 72 EQTTLLFVRFNESYIGSSKVQERSRQSIAYILKNANHQPGCLLRYEGDQIVAKSIMEAVM 131 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYT--SDSLPPTSSETLLDKLITRLAASLKSP 192 E + + E+ ++ML+ R+ T + + ++E L+ ++ + ++ SP Sbjct: 132 REHEERSFYHQELLLQFIDTVLMLIVRNITTLLPEKVNENTAEKALE-ILQYVQTNIASP 190 Query: 193 --FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 + SE L + F++QT T+ +Y+ ++ + L HS + +++I+ Sbjct: 191 EKIRAKAISRQFGISEHYLGRYFKKQTNETLQEYIIHYKLRMVKSRLLHSNMRMNEIADG 250 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRHL 277 GF D ++ + +F + G++P+Q+R Sbjct: 251 LGFTDKSHLNRLFKKHNGVSPAQYRKQ 277 >UniRef50_C0YSE7 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YSE7_9FLAO Length = 284 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 22/264 (8%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 H H+F EL+I+ G G H LN+ + +GD+F + D H + I + Sbjct: 23 EYHNHNFYELIIIEHGKGFHHLNNVTFPYKKGDVFILRPSDAHEFTITGTTRFIYIKFTE 82 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRL-------------GSMGMAQARQVIGQLEHESS 138 + + WQ +P N + L A Q+ L +E S Sbjct: 83 QYI-----WQNHLPNQNNELKKMVQLLMEDHSFVYESVIKNKTDRAHLLQLARILLYEFS 137 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP--TSSETLLDKLITRLAASL--KSPFA 194 + E+ LF ++ +L R+ + + T + + ++K++ + + Sbjct: 138 HKNTYNKEITADLFSSVITILIRNTINNSTAKEWMTQNLSRIEKILYYINVNALDADKMK 197 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 + +E S + +++TG ++ Q++ Q ++ A+ LL SR IS+I+ GF Sbjct: 198 IGNLAEEFMLSPHYISIYIKKETGFSVQQHVMQHKIKTAEKLLLQSRYNISEIADRLGFN 257 Query: 255 DSNYFSVVFTRETGMTPSQWRHLN 278 D+++F+ +F M+PS+++ + Sbjct: 258 DASHFNKIFKTYKQMSPSEFKKKS 281 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 113/294 (38%), Gaps = 14/294 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYP--QDVFAEHTHDFCELVIVWRGNGLHVLNDRPY 58 M + ++ +D V P ++V H HD EL+ RGN + Sbjct: 1 MTNPYQIKQDVPHRDQDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETV 60 Query: 59 RITRGDLFYIHADDKHSYASVNDLVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQPHW 116 + GDL +++ H+ + ++ ++ +++ + + + N A + Sbjct: 61 KPEPGDLMFVNKGMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRF 120 Query: 117 R-----LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 + + ++ Q+ E Q + + L++ L+RH + Sbjct: 121 FPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGS 180 Query: 172 TSS-----ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLR 226 + +LI + + + + SE + F++ TG T +Y+ Sbjct: 181 ADTVGAELTDRFKELIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVN 240 Query: 227 QVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +R+ A+ LL HS I++I+ + GF NYFS +F + +PSQ R ++ Sbjct: 241 LLRINAAEQLLIHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRYAR 294 >UniRef50_D1U5Q1 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Q1_9DELT Length = 279 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 4/274 (1%) Query: 2 AHQLKLLKDDFFASDQQAVAV-ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 + + D V + RY + F H HD + ++ G VL + + Sbjct: 3 RNPANTHVRFWRDPDLPGVEIRTSRYNAEAFCRHVHDAWSVGLIEDGRTTFVLEEARHVA 62 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 RG + I H+ + V+ ++ L+ + G S G P + Sbjct: 63 ARGKIVVIPPGAVHACNPDPNSVMAYRMFYVAPGLLD-GVAAEVFGRARSGGSPRFGTPV 121 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + A ++ +L H + A E LL L LL RH + Sbjct: 122 IDDADLYRLWRRL-HAAVATGADALEKQSLLMQGLAELLTRHGRLGSPRQCGRVPDAVKT 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 + LAA L +LD S L + F ++ G+ + Y Q+RV A+ LL Sbjct: 181 VRHHLAARLDERVSLDDLSALVGISRYHLLRVFSREAGLPPHAYQNQLRVVRAKVLLAQG 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 IS ++ E GF D ++F+ VF + TG TP Q+ Sbjct: 241 E-PISQVAAEVGFADQSHFTRVFRQFTGATPRQY 273 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 101/259 (38%), Gaps = 14/259 (5%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP 91 H H E++ +G+ +ND P ++ G++ I+ D H + + I + Sbjct: 28 YPHWHKEIEIIYALKGSLNLGVNDMPIQLKEGEIQVINGGDVHYFLASPSSERVVIQFDL 87 Query: 92 ERLKLNLDWQGAIPGFNA---SAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 + + + +A+ + +I + ESS P + + Sbjct: 88 SLFQEEMQMDDQMQTLREMLTEMAHLSREWPEETVAKMQSLIMNIHEESSGEKPGKHYIL 147 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPT---------SSETL--LDKLITRLAASLKSPFALDK 197 + ++ L+ R + P + S ETL LD++ + + + P +L + Sbjct: 148 KADLLAIIGLIYREIPQIKTQPDSVISEEAVLKSQETLHKLDQIFSYVEKHYQEPVSLQE 207 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 + S + F++ TGMT +L R+ A+++L + +++++ GF Sbjct: 208 VANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRLNKAKWMLLNEAFPVTEVAELAGFSSVK 267 Query: 258 YFSVVFTRETGMTPSQWRH 276 F F R G+ P ++R Sbjct: 268 TFHHAFKRAMGVAPLKYRK 286 >UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRP4_9SPHI Length = 290 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 18/292 (6%) Query: 5 LKLLKDDFFASDQQAVAVAD-RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +K L + S+Q ++ V + P H H EL + + +G + D G Sbjct: 1 MKALFEKLVFSEQSSLLVRRFQIPYFDAPWHYHPEYELTYIVKSHGRRFVGDHVDSFQAG 60 Query: 64 DLFYIHADDKHSYASVND------------LVLQNIIYCPERLKLNLDWQGAIPGFNASA 111 DL + D H + + +D +V+Q PER + ++ + Sbjct: 61 DLVLLGPDLPHFWRNDDDYYQAGSVQKAVSIVVQFPATFPERGLATVPEAESVRKLLERS 120 Query: 112 GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANE--MAELLFGQLVMLLNRHRYTSDSL 169 R +++ QL ++ + EL Q LL Y Sbjct: 121 RYG-LRFSQAMSQSVSELLEQLPQQTGLPQLLGLLTILNELATDQEAYLLASDGY--QLA 177 Query: 170 PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 P + + +++ + + ++ A + + F+ +T T +YL ++R Sbjct: 178 PGAAETERMKRVLEFVLLHFREEIRIESIASIAGMAPAAFCRYFKNRTRKTFVEYLNELR 237 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 + HA+ LL + L IS +S +CG+ +S++F F T +TP Q++ L K Sbjct: 238 IGHARKLLTTTDLSISQVSLDCGYNNSSHFHRQFKLYTSITPFQYQALAKGK 289 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 93/241 (38%), Gaps = 11/241 (4%) Query: 39 CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK-H-SYASVNDLVLQNIIYCPERLKL 96 +L+ + G G ++ + G L H SY + + + I + Sbjct: 67 FQLIYITGGKGRFRFHNETIEVPSGSLVVYTPGQPQHYSYQAEDGTEVYWIHFT------ 120 Query: 97 NLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLV 156 + F H + + ++ E + H P + M +++ Sbjct: 121 GYSAYDYLQQFGLLTQPVH---TVGIIDDVTALFKKIIQELNSHRPLGSHMVNAYLLEML 177 Query: 157 MLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQ 216 LL R T++ ++++I + ++ E S S +F++ Sbjct: 178 TLLGRRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKEV 237 Query: 217 TGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 TGMT +Y+ ++R+ A+ LL S L + +++ G+++ YFS +F G+ PS+++ Sbjct: 238 TGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYKK 297 Query: 277 L 277 Sbjct: 298 Q 298 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 89/243 (36%), Gaps = 17/243 (6%) Query: 37 DFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIY---CP 91 D + +V G G++ + + + GDLF + +YA+ + + + C Sbjct: 41 DHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADETDPWEYYWVGFNGACA 100 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 +L + P + Q R+ + + + S P + Sbjct: 101 NKLVQQTPFSDLHPVHHCKDPQA-----------VREALYNI-YLSRGPEPQCEALMTGY 148 Query: 152 FGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 + L + + +SS + I + + ++D S L + Sbjct: 149 LYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYR 208 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F G + YL R+ A LL++S L I++I+ GF D YFS VF + G+ P Sbjct: 209 VFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPP 268 Query: 272 SQW 274 S++ Sbjct: 269 SKY 271 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 104/276 (37%), Gaps = 14/276 (5%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRP-YRITRG 63 + L+ F + + + H HDF E+ ++ G + P +I G Sbjct: 1 MNLVNPRTFNPEIIYLFDPWTQSESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAG 60 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 + + H + + + L + P + + Sbjct: 61 SVMLFNPGVDHCELQPKGTRSHQLHIGLKNISLEGFKRNFFPNKHPLLELGKYH------ 114 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD-------SLPPTSSET 176 Q + QL ESS+ M + + ++++ + R S + Sbjct: 115 HQVLEKAWQLVRESSEERDEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQ 174 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 +++ + L K L+K + S L + F++ TG++ YL ++R+ A+ + Sbjct: 175 IVNYTVYYLENHYKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDM 234 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 L++ L I ++++ G++D+ +FS F + G++PS Sbjct: 235 LKNENLTIKEVASAVGYQDAYHFSKSFKKLYGVSPS 270 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 10/254 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIY 89 H HD EL+ + +G G ++ + Y +T L I HS + +NII+ Sbjct: 37 PLHWHDDMELIYIKKGCGHISVDFKEYHVTAPSLVLILPGQLHSIDQYMDESMEYENIIF 96 Query: 90 CPERLKLNLDWQGAIPGFNASAGQPHWRLGS------MGMAQARQVIGQLEHESSQHVPF 143 L L + F + + + I + Sbjct: 97 SLSML-LPGKYDYTKEDFLTPLLAGRFTVPTVFTPVYPYYEDVVAPIDACDEICKTMPQG 155 Query: 144 ANEMAELLFGQLVMLL-NRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + + +L NR R + L + + ++ + + ++ D A Sbjct: 156 YQLYIKSKLYEFFFVLDNRCRNLTKPLKSKKTLDKMKVVLKYVENNYADKISIADIADVA 215 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 SE + F++ G + YL+ R+ A LLQ S + IS E GFE +YF+ Sbjct: 216 GFSESHFMRYFKETMGTSFVDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRA 275 Query: 263 FTRETGMTPSQWRH 276 F + GMTP Q+R Sbjct: 276 FKKHYGMTPLQYRK 289 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 99/254 (38%), Gaps = 11/254 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H HD + V +G + R Y + G+ +I++ H S+++ PE+ Sbjct: 57 HWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMFPEK 116 Query: 94 LKLNL-----DWQGAIPGFNASAGQPH--WRLGSMGMAQARQV--IGQLEHESSQHVPFA 144 L + +P ++ +R + + + +L + F Sbjct: 117 LLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVTAFE 176 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPP--TSSETLLDKLITRLAASLKSPFALDKFCDEA 202 E+A + + ++ T +P + + K++ + L + + A Sbjct: 177 YEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIAESA 236 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S S R+ F+ T YL RV LL+ + L I+DI+ GF DS+YF Sbjct: 237 SISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYFIQA 296 Query: 263 FTRETGMTPSQWRH 276 F ++ GMTP Q+R+ Sbjct: 297 FKKKNGMTPKQYRN 310 >UniRef50_C3RPM5 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RPM5_9MOLU Length = 286 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 121/281 (43%), Gaps = 15/281 (5%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 ++L DF+ D + +H H E++I G+ + +N +I Sbjct: 19 DNELPTKLHDFYIEDNIG---------EPIEKHWHRSIEILIPLYGSFILWINGNKVKII 69 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDW--QGAIPGFNASAGQPHWRLG 119 G+++ I++ D H+ ++ + Y L++ D+ + QP+ ++ Sbjct: 70 AGNIYIINSQDIHAIQAIEGERI----YKGYALQIKYDYLRESYHDIDKIYFQQPNQQIN 125 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD 179 + MA+ +I E + + ++L L+ L++ R + + + + Sbjct: 126 KLLMAKIIDIINFYESDDPYNNIRVKSHIQMLVFLLLDNLSKKRIGYLEVKDSKYKDRIT 185 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 K+I L + + ++ DE SE L + F++ G T+ +YL +VR+ HA+ L Sbjct: 186 KIIKYLENNYQEDLSVKMIADEFGLSEGYLSKLFKESLGATVKEYLSRVRLWHAEEQLVE 245 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 + + DI+ GF + F+ F R+ +TP+++R + Sbjct: 246 TDYPVIDIAIGNGFPNVKSFNQAFKRKNVITPAKYREKMRK 286 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 23/292 (7%) Query: 6 KLLKDDFFASD---QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITR 62 + L +F SD + +R PQ H HDF ELV V RG+ +V++ R + + Sbjct: 77 RFLSRNFRPSDILINAHIPFFNRSPQ----PHKHDFFELVYVVRGSMKNVVDGRRILLEQ 132 Query: 63 GDLFYIHADDKHSYASVNDLVL----------QNIIYCPERLKLNLDWQGAIPGFNASAG 112 GD ++ + H + L N + L+ L + Sbjct: 133 GDFCLMNPNAVHQVETDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKN 192 Query: 113 QPHWRLGSMGMAQ---ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR--HRYTSD 167 + ++ + S + Q + Q+ E ++ + E L + R R Sbjct: 193 KQNYLVFSARHLEEPIISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEF 252 Query: 168 SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 + K+I+ L+ + ++ L + + + L ++ G + ++ ++Q Sbjct: 253 ESLQDLPGGNISKIISYLSENYRTA-TLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQ 311 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 R+ HA LL+ + L ISD++ E G+ + YF VF ++ GM+P+ +RH N Sbjct: 312 FRLAHACELLKQTELPISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQNQ 363 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 98/265 (36%), Gaps = 13/265 (4%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN- 80 + H H E+ V G G ++ D R + GDL + H++ S + Sbjct: 19 FERSALETPAKWHRHPELEITYVPYGTGTRLVGDHVARYSPGDLVLSGENLPHTWLSDDF 78 Query: 81 ------DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 + I + + L + + R G + A Q +G + Sbjct: 79 VGKKFDRHIAYVIQFSNDFLGSTFFESPELNDVRLMLHKA--RRGLLFSPSAVQRVGDIM 136 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP---TSSETLLDKLITRLAASLKS 191 + ++ L+ S+ P +S+ +DK + L+ Sbjct: 137 KLMPEQQGLTQLISLFNCLNLLAEEGGEVLASEGYTPGFDHASDWRIDKACNYINEHLED 196 Query: 192 P-FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 P + C E + + F++ TG T+ QY+ ++R+ A LL + I D+S + Sbjct: 197 PELSHAAICKEVDMNPSSFSRMFKRATGRTVTQYVSELRIGIACRLLMETGDSILDVSLK 256 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWR 275 GF++ + F+ F + MTP ++R Sbjct: 257 SGFDNLSSFNRSFRKIKQMTPREYR 281 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 12/269 (4%) Query: 19 AVAVADRYPQDVF---AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 + V + +D F ++H H+ E + G + R + + G+ +I++ + H Sbjct: 17 PLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHE 76 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--GQPHWRLGSMGMAQARQVI--- 130 S + I++ P+ L L L S+ + Q+I Sbjct: 77 IKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMILFH 136 Query: 131 -GQLEHESSQHVPFANEMAELLFGQLVMLLNR---HRYTSDSLPPTSSETLLDKLITRLA 186 ++ A+ ++ Q++ L + + S S+ L K+I + Sbjct: 137 MQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYIH 196 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 + P +L S F+Q+ G ++ + R+ A +L S L +S Sbjct: 197 ENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVSQ 256 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++ GF++ +YF F +TP+++R Sbjct: 257 VAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FW59_9FIRM Length = 292 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 112/284 (39%), Gaps = 10/284 (3%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 Q K + S + + + + H+HD+ E G+ + Y + G Sbjct: 6 QTKFSTRQYMLSRDFEIYYYNEPASEKVSIHSHDYYEFYFFLEGDVSIWIEGEQYPLKYG 65 Query: 64 DLFYIHADDKH-SYASVNDLVLQNIIY------CPERLKLNLDWQGAIPGFNASAGQPHW 116 D+ I KH + N++ + ++ C + ++++ + G + + + Sbjct: 66 DMVLIPPGIKHMAMVHGNEIPYRRFVFWISVEYCNQLMEVSSSY-GYLMQNVLVKKKYIF 124 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD-SLPPTSSE 175 + + I QL E L LV+ LNR Y + Sbjct: 125 HNDLITFNTIQYRIFQLIEEIKSERFGKEAKVSLCVNDLVLQLNRIVYEQQNPKSEKEEQ 184 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 L +I + L +L++ + S+ + F++Q G++++QY+ + R+ ++ Sbjct: 185 NLYQNIIYYIDDHLDEELSLEQLAGQFFVSKYHIAHIFKEQMGLSVHQYILKKRMQASKA 244 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 + I+D+ T GF+D + F F +E G++P +++ ++ Sbjct: 245 AIL-GETSITDVYTMFGFKDYSSFYRAFKKEFGVSPKEYKEVHG 287 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 96/256 (37%), Gaps = 5/256 (1%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS--YASVNDLVL 84 P H H ELV V GNG + T+GDL I ++ H + Sbjct: 31 PNKNLVWHYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTS 90 Query: 85 QNIIYCP-ERLKLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEHESSQHV 141 ++++ + L + + + + + I LE++S Sbjct: 91 ESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIGEKIEILEYKSDFQR 150 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 A G + + ++ + + + + P +L++ D Sbjct: 151 LLAILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEEMADL 210 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 + + F++ T T Q++ + R+ HA LL + + I++I E GF + ++F+ Sbjct: 211 THMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFNK 270 Query: 262 VFTRETGMTPSQWRHL 277 F TGM+PS++R+ Sbjct: 271 SFKAFTGMSPSEYRNQ 286 >UniRef50_D2QLM0 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QLM0_9SPHI Length = 310 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 17/262 (6%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIY 89 F HTH+ EL+++ G G H +N + GD+F + D H++A + + Sbjct: 21 PFPSHTHNHFELILIRSGTGHHHINGNRFVYQAGDVFLLGPLDCHTFAVNQKTCFCCLSF 80 Query: 90 CPERLKLNLDW-QGAIPGFNASAGQPHWRL---------GSMGMAQARQVIGQLEHESSQ 139 + P H L + Q+I + +++Q Sbjct: 81 TDLYMASLSPMGTNTWPQIREHGLTKHQPLVGSLVTDGLEQQNLFALFQII--MAEQNAQ 138 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLITRLAASLKSP--FA 194 P +N + E L ++ +++R PT ++ +L ++ T + + P Sbjct: 139 QSPLSNPVIESLMKTILSIVDRQLLQYQLGMPTAYGTASSLRQRIGTYIHRYITEPDYLR 198 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 L+K D + S+R L F+QQTG +I QY+ + ++ + L+ S L +S I+ E GF Sbjct: 199 LEKMADVFNYSQRHLGALFKQQTGESIQQYIIRYKLQLVETRLRLSTLTVSQIADEFGFT 258 Query: 255 DSNYFSVVFTRETGMTPSQWRH 276 D + + +F R TP+ +R Sbjct: 259 DVCHLNKLFKRYYRQTPTGYRR 280 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 95/259 (36%), Gaps = 9/259 (3%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQ 85 Q + H H E + + G + + + G+ +I + H V+D L Sbjct: 30 QVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSLY 89 Query: 86 NIIYCPER---LKLNLDWQGAIPGFNASAGQPHWRLGSMG--MAQARQVIGQLEHESSQH 140 + P+ +L I F S +L M+ ++ + Q Sbjct: 90 ATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQK 149 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL--LDKLITRLAASLKSPFALDKF 198 + + Q++ L +H ++ + + + + K++ + + + Sbjct: 150 EEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQL 209 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + SE + F+ MT +Y+ R+ A LL+ + I DIS GF+ +Y Sbjct: 210 ANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSY 269 Query: 259 FSVVFTRETGMTPSQWRHL 277 F +F R TPS++R + Sbjct: 270 FIKLFKRHKRCTPSEFRRI 288 >UniRef50_B1KR44 Transcriptional regulator, AraC family n=2 Tax=Alteromonadales RepID=B1KR44_SHEWM Length = 289 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 16/268 (5%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS-V 79 V + P F H H E+ + GL + D + DL ++ H++ S + Sbjct: 18 FVKYQLPNIDFNWHYHPEYEICLTLNSQGLRYIGDHIEEYSEPDLVFVGPHMPHTWHSSI 77 Query: 80 NDLVLQNIIYCPERLKLNLD----WQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQL 133 N+ I+Y + KL LD + G + +A + Q+ Sbjct: 78 NEDESTQIVYVAQIPKLWLDGQVAEHPEMQGLEEMLERSSRGIFYSPESTEKALSLFQQM 137 Query: 134 EHESSQHVPFANEMAELLFGQLVML-----LNRHRYTSDSLPPTSSETLLDKLITRLAAS 188 E PF+ + + +++ L R+ + S LD++I + + Sbjct: 138 E----SADPFSRYILLMNLLNVMLKDAQSKLLSSRFFTYGDKTDSGIDKLDRVIEYIYGN 193 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 D+ A S + F+++T T+ +++ Q+R+ A LL +S IS IS Sbjct: 194 FDRGLYADELAAIAHMSTNHFHRFFKKRTERTLTEFINQLRIGKACKLLINSNHPISVIS 253 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRH 276 +CGF + + F+ F G TPS++R Sbjct: 254 DQCGFNNISNFNRQFLSIKGSTPSRFRK 281 >UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibrionaceae RepID=A6B487_VIBPA Length = 279 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 10/240 (4%) Query: 41 LVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND---LVLQNIIYCPERLKLN 97 + I +G G + + + GDL H Y D + + + P Sbjct: 45 INITSQGEGTIFHGNDAFDVKTGDLLLFPPSATHFYHRKKDNASWFHRWVYFRPRAFW-- 102 Query: 98 LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVM 157 DW N L + ++Q ++ +E+ S +P+ +++A L QL++ Sbjct: 103 NDWLCWHEQRNGVYLTQG--LDNSTISQIERLFIDIEYISKSDMPYRDDLAINLLEQLLI 160 Query: 158 LLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQT 217 R + + + + + + + +L F L+ D S L FR + Sbjct: 161 ---RCKTIQPDVVSKPLDPRVIEAMNYMTQNLNQNFTLEDIADFTCLSASRLGHLFRDEV 217 Query: 218 GMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 GMTI Q+ R+ A+ LL + ++ I G+ D YFS VF R+ G +P +R Sbjct: 218 GMTITQWRDDQRISRAKQLLVTTNYSVNHIGRIVGYTDPLYFSRVFKRKAGASPKLYREQ 277 >UniRef50_UPI0001C36187 helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36187 Length = 301 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 110/286 (38%), Gaps = 10/286 (3%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 Q K + S+ + + HTHD+ E GN + ++ Y + G Sbjct: 6 QTKFSTRQYMLSEDFEIYYYKEHYLSKVELHTHDYYEFYFFLEGNISMKIEEKQYPLQYG 65 Query: 64 DLFYIHADDKHS-YASVNDLVLQNIIY------CPERLKLNLDWQGAIPGFNASAGQPHW 116 DL I + +H + + ++ C + ++L D+ G + + + + Sbjct: 66 DLVLIPPEIRHRAVVHDEETPYRRFVFWISREYCNQLVELCRDY-GYLMQYVTVRKEYIF 124 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY-TSDSLPPTSSE 175 + + + L E L L++ LNR Y + P Sbjct: 125 HNDVIAFNTIQSKVFHLIEEIHSQRFGKTAKIPLCVNDLILHLNRVVYEQNHPKSPKEER 184 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 L +KLI + L L++ E ++ + F+ G++++QY+ + RV + Sbjct: 185 DLYEKLIDYIEEHLDEELTLERLAREFYVNKYHISHAFKDNMGLSVHQYITKKRVAACRE 244 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 L + + IS++ GF+D + F F +E G++P ++R K Sbjct: 245 ALLN-HVKISEVYPMFGFQDYSGFYRAFKKEYGISPQEYRETKKSK 289 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 98/272 (36%), Gaps = 6/272 (2%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 V +P+ H H E++ + G ++ Y + GD+ ++++ HS Sbjct: 18 PFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAIHS 77 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 V D + +++ L + L + ++ Q+ Sbjct: 78 GIPV-DCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQMFE 136 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKLITRLAASLKS 191 + L+ + S S + + K++ + Sbjct: 137 IMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKVLFFIETKYME 196 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 +L+ +E+ + F++ T T +YL R+ A ++ I+D++ +C Sbjct: 197 NISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDC 256 Query: 252 GFEDSNYFSVVFTRET-GMTPSQWRHLNSQKD 282 GF D++YF+ VF + GMTP ++ L +K+ Sbjct: 257 GFNDTSYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EC7D Length = 280 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 96/250 (38%), Gaps = 7/250 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN--IIYCP 91 H+H F E+ G +++ D + + GDL ++ H D + + P Sbjct: 23 HSHAFYEIYYFHEGRCTYLIGDSVFTLKPGDLLLMNGLTLHCPNVEPDSRYVRSILHFDP 82 Query: 92 ERL--KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 + L+ + + + L + ++ + SS F E Sbjct: 83 AWICRGLSETAKSILLDPFETLRNHRMTLTGENREEFEGMLADIHRLSSSTAGFRQERMT 142 Query: 150 LLFGQLVMLLNR--HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 L +++ ++ D + E + +++ + + L+ + ++ Sbjct: 143 LRIQEMMYVIADWCQAAVQDHDSISEKERHVQHVVSFVEENYMLDLTLEGIARDMHITKH 202 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ-HSRLLISDISTECGFEDSNYFSVVFTRE 266 L F++ TG T+ +Y+ R+ A+ +L+ H L I++IS GF+ +FS +F Sbjct: 203 YLSSLFKEVTGTTVFKYVYHRRINQAKIMLRLHPHLSITEISQASGFKHLAHFSRMFKAM 262 Query: 267 TGMTPSQWRH 276 G TP +R Sbjct: 263 VGTTPEHYRR 272 >UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AXU1_ENTCA Length = 299 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 109/279 (39%), Gaps = 14/279 (5%) Query: 13 FASDQQAVAVADRYP----QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 F + + Y + H H CE++ V +G + D+ + R D +I Sbjct: 3 FPQETNYAKITAYYSVALERFSMDPHQHPACEIMFVTKGKCKIKVQDQVIVLERNDFVFI 62 Query: 69 HADDKHSYASVND-LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 +A +H+ D + NI + L + + S + Q Sbjct: 63 NAFVEHALLVEGDSCTILNIEFLLSETPSGLCVRDVFAYIKGNVQLNEPYAKSRDVRQFG 122 Query: 128 QVIGQLEH----ESSQHVPFANEM--AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 Q I L + +Q P A ELLF +++M L T ++ ++ Sbjct: 123 QAIKSLLQLLMIDDTQEQPSAERQFTIELLFKRMLMELAFSLRTKET---KRGNCYVNAA 179 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 I + + + ++ L + F +Q G+T+N +L R+ A +LL +S+ Sbjct: 180 INYIQQHFDEDIQVSQIAAAVGITKTYLHKLFHEQLGVTVNHFLTSERLKQAAFLLSNSQ 239 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 L I +I+ + GF +F+ F ++ GM+P ++ L Q Sbjct: 240 LPIVEIAAQAGFNSRQHFTNTFKQKKGMSPKAYQLLYKQ 278 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 11/280 (3%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F D + P + H H E++ + G G + D GD+ I Sbjct: 10 FPIDSHIHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEGDVCMIGPQL 69 Query: 73 KHSYAS-------VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 H + + + L I +R + N R G + + Sbjct: 70 PHEWRNDPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERSRRGIKFVGK 129 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL----PPTSSETLLDKL 181 +R+ I +L +S+ + + + +L+ + + + + +K+ Sbjct: 130 SRKKIAELISQSANETGASRVIKLIALLELMATSEEYEILASTGFTETVNSDDFERFNKV 189 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 L + SP L++ + + F+++T T +YL +R+ HA+ LL Sbjct: 190 YKYLVKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGHAKKLLIEGN 249 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 L IS IS+E GF + + F F + T M PS+++ ++ Sbjct: 250 LKISTISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKER 289 >UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI4_9FIRM Length = 299 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 5/252 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA--SVNDLVLQNIIYCP 91 HTH F E IV G+ LH++ND IT+GDL +I D HSY +D + NI + Sbjct: 34 HTHTFYEFFIVAEGSALHLVNDSIQTITQGDLVFIRPKDTHSYQFYYSDDFRIINIGFSE 93 Query: 92 ERLK---LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 + L+ L LD + S P RL G + ++ Sbjct: 94 QLLQNIRLFLDHTAMLRTLTESELPPCVRLDKSGREEISVRFEEIGALMDTPKIQKTVFY 153 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 V Y ++ P S + ++ + K + +SCS Sbjct: 154 AKCCLADVFTRYFFSYDTEEFPTASCPSWFQPMLNEMQKFDNLRIGFPKMIELSSCSSNH 213 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L + F+ +T +Y+ R+ ++ YLL + I +IS CGF ++F +F ++ Sbjct: 214 LCRVFKSVMSVTPTEYINSKRLEYSVYLLTQTSKEIIEISMLCGFSSLSHFYHLFKKKYQ 273 Query: 269 MTPSQWRHLNSQ 280 PS++R +N Sbjct: 274 CPPSRFRKMNGN 285 >UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUA4_CHRSD Length = 303 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 96/272 (35%), Gaps = 24/272 (8%) Query: 27 PQDVFAEHTHDF------------CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 P+ F H HDF EL ++ G + + D R G+L + + H Sbjct: 23 PKFSFYWHCHDFPAPIARWNYHPEYELHLIRYSEGNYFVGDYIGRFGPGNLVLVGPNVPH 82 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQ------ 128 ++ S D I L+ +W + + A Q Sbjct: 83 AWLSDPDDSRSVIKGRDVVLQFKGEWLEHMMALCPELNCLSTLIEDSRQGVAFQGEEATR 142 Query: 129 ----VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 +I E + + + + L L+ Y ++ +S++ +D ++ Sbjct: 143 CGELLITMGEQDHAGRLLTMLTILRGLSQCDYATLSSREYGLEATGVSSAQ--VDAILRY 200 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + S + F+ TG T +LR++R+ HA LL R I Sbjct: 201 IHDHFHEELRMSALAARNGMSPSSFSRFFKHATGDTFVAFLRRIRIGHACQLLLEGRQSI 260 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 +DI + G+ + + F+ F GMTP Q++ Sbjct: 261 ADICFQVGYNNLSNFNRHFRELKGMTPRQYQQ 292 >UniRef50_B2JDH4 Transcriptional regulator, AraC family n=33 Tax=Proteobacteria RepID=B2JDH4_BURP8 Length = 339 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 110/282 (39%), Gaps = 20/282 (7%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 D+ A +P H H E+ ++ G + D G+L + + H Sbjct: 12 RDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPGNLVLMGPNLPH 71 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 ++ S + I ++ D+ + + P WR +A +R+ + Sbjct: 72 NWVSEVPEGVT-IEQRNLVVQFPQDFVA-----HCTQSFPEWRTLEALLADSRRGVSFGA 125 Query: 135 HESSQHVPFANEMAELLFGQLVMLL-----------NRHRYTSDSL---PPTSSETLLDK 180 S++ P E+ + + ++L +R S + P + + T ++ Sbjct: 126 QTSAKIQPLFMELLDARGLRRIVLFLSMMEILLNASDRELLASPAYQIDPTSYASTRINH 185 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 +++ + +L S + A S + FR+ TG+T QY+ ++R+ A LL Sbjct: 186 VLSYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQLLMDD 245 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 L ++DI + GF + + F+ F GM PS++R D Sbjct: 246 ELSVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLND 287 >UniRef50_D1PSQ0 AraC-type sugar metabolism regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSQ0_9FIRM Length = 275 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 105/268 (39%), Gaps = 8/268 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + + H HDF E+ ++ RG +++ + YR+ GD + Sbjct: 2 IASDYEIYRYRSTYMNEVELHHHDFYEVYLLLRGRVEYIVENHIYRMRPGDWMLTSPLEL 61 Query: 74 HSYASVNDLVLQNIIYC------PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 H V D+ E L + + RL AQ R Sbjct: 62 HQARIVTDVDAYERFVLWIARPYLEHLSTPRTSLTRCFDTSVANHTNLLRLPGAAGAQMR 121 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSETLLDKLITRLA 186 I +L + ++ +A+ L++ LNR D+ P SS+ ++D ++ + Sbjct: 122 ASIDRLCTLRTSKEYGSDLLAQGALVDLMIGLNRAAAERGDARPMGSSDQVVDAVLHYIN 181 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 LD+ ++ S+ L ++F Q G T+++Y+ Q R+ +A+ LL + ++ Sbjct: 182 EHYSETLTLDQLAEKFFISKYHLLRKFDAQVGTTVHRYILQKRLLNAKQLLA-GGVPPNE 240 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQW 274 + CGF D F F E TP Q+ Sbjct: 241 VCQYCGFGDYANFYRAFKAEYNQTPRQY 268 >UniRef50_UPI0001787F68 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F68 Length = 293 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 1/243 (0%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H F E+ V G G+++ DR Y + G F H V+DL L + Y Sbjct: 42 HRHSFVEICYVNGGTGVYLEGDRTYPLYPGVAFCTRPGQLHQIKDVHDLNLLFVAYDARE 101 Query: 94 LKLNLDWQGA-IPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 D A + + S + + ++ + E E S ++A L Sbjct: 102 KPSASDVTAAYLEALRRCTVWTEFASESPAIQLWKSMLVRSEAEDSLPASLLPKLAHALL 161 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ 212 L R + +++ L+ + + +L P +L + + SER L + Sbjct: 162 ESFPALFGAARNLDAAPSYSTTVQLVQRAKLYIRDNLSGPLSLPEVATYLNVSERQLSRL 221 Query: 213 FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPS 272 + + +R R+ A+ LLQ + I I+ GF +YF+ +FT+ G++P+ Sbjct: 222 LAGSIHESFSSMVRTERIRAAELLLQQTHDPIKLIAERTGFSSVHYFTRLFTQFKGISPA 281 Query: 273 QWR 275 +R Sbjct: 282 VYR 284 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 15/262 (5%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 H H+ E++ G+ + + R L + + HS S + L + Sbjct: 26 NTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLC 85 Query: 88 ---------IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 +YCP+ ++ + + S P+ L + R + + Sbjct: 86 IHVDKKQLSVYCPDLELYHIKCRPV--SLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAM 143 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 + A M L+ + + + S +L K+I+ + +L++ Sbjct: 144 RSDGTALLMLAD----LIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEV 199 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 ++ S + F+Q G+T +YL +VR+ HA +L ++ IS++ E GF + Sbjct: 200 ANQVGFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTI 259 Query: 259 FSVVFTRETGMTPSQWRHLNSQ 280 F+ +F GMTP Q R+ ++ Sbjct: 260 FNRLFKEIYGMTPRQARNSYAE 281 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 5/255 (1%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ 85 +P+ V + H H E++ + G+ L+++ + + D+ ++H+ HS +D V Q Sbjct: 28 HPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGILHS-GIPHDCVYQ 86 Query: 86 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 I++ N G + S Q I L + Sbjct: 87 CIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISVLFDAMYEKDTGYE 146 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSE----TLLDKLITRLAASLKSPFALDKFCDE 201 F L+ + Y ++ T + L +++ + + +P L + Sbjct: 147 LTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKNYANPITLQELSAS 206 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 S S + + F + T T YL + R+ A L + I++I+ GF D +YF Sbjct: 207 VSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNGFNDLSYFIR 266 Query: 262 VFTRETGMTPSQWRH 276 F + GMTP +++ Sbjct: 267 TFKKYKGMTPGKYKR 281 >UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0F8_PAESJ Length = 275 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 10/253 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN--IIYCP 91 H+H E+ G +++ D+ Y + GDL ++ H + + I + P Sbjct: 17 HSHMHYEVYYFHGGKCNYLIGDQIYELAPGDLIIMYGMTLHCAKADPSVEYIRSIIHFEP 76 Query: 92 ERLK--LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 L+ L L I RL A+ +++ +++ + + Sbjct: 77 TLLQPYLELPHARNILQPFQQLNNYRLRLRGEDKAEVERILARMDEYQKRGDAVGDNRFR 136 Query: 150 LLFGQLVMLLNRHRYTS-----DSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASC 204 L F L+ ++ H + E + ++I+ L + ++ + Sbjct: 137 LAFVDLLYMILDHCEQPLLNRNRQEYSSEKEATVQRIISVLEENYTEDLNMELLEERLHL 196 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYL-LQHSRLLISDISTECGFEDSNYFSVVF 263 S+ L + F++ TG+TI Y+ R+ A+ L L L ++++ GF+ +FS +F Sbjct: 197 SKSYLSKLFKEVTGVTIFHYIYTRRINEAKILFLMQPELSVTEVCFRLGFKHLAHFSRLF 256 Query: 264 TRETGMTPSQWRH 276 + GM P Q+R Sbjct: 257 KQYAGMPPEQFRK 269 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16... 265 9e-70 UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax... 255 1e-66 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 248 2e-64 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 244 2e-63 UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax... 241 1e-62 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 241 2e-62 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 241 3e-62 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 236 4e-61 UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=T... 236 5e-61 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 235 1e-60 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 234 2e-60 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 234 2e-60 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 234 3e-60 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 233 4e-60 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 233 4e-60 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 233 4e-60 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 231 2e-59 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 230 4e-59 UniRef50_UPI000197C3B0 transcriptional regulator, AraC family pr... 230 5e-59 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 229 6e-59 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 229 9e-59 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 228 2e-58 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 228 2e-58 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 227 2e-58 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 227 2e-58 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 227 4e-58 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 226 5e-58 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 226 6e-58 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 226 7e-58 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 226 8e-58 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 225 1e-57 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 225 1e-57 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 225 1e-57 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 225 1e-57 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 225 2e-57 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 224 2e-57 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 224 2e-57 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 224 2e-57 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 224 3e-57 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 223 5e-57 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 223 6e-57 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 222 7e-57 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 222 8e-57 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 222 9e-57 UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=... 222 1e-56 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 222 1e-56 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 221 2e-56 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 221 2e-56 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 220 4e-56 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 219 6e-56 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 219 6e-56 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 219 7e-56 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 219 8e-56 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 219 9e-56 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 219 9e-56 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 219 9e-56 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 219 1e-55 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 219 1e-55 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 218 1e-55 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 218 1e-55 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 218 2e-55 UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=... 218 2e-55 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 218 2e-55 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 217 2e-55 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 217 2e-55 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 217 3e-55 UniRef50_A6AXJ0 HTH-type transcriptional activator RhaS n=2 Tax=... 217 3e-55 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 217 3e-55 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 217 3e-55 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 217 3e-55 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 217 4e-55 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 217 4e-55 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 216 5e-55 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 216 6e-55 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 216 7e-55 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 216 9e-55 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 216 1e-54 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 216 1e-54 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 215 1e-54 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 215 1e-54 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 215 1e-54 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 214 2e-54 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 214 2e-54 UniRef50_UPI0001744EC9 transcriptional regulator, AraC family pr... 214 2e-54 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 214 2e-54 UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=A... 214 2e-54 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 214 3e-54 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 214 3e-54 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 214 3e-54 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 214 3e-54 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 214 3e-54 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 213 5e-54 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 213 5e-54 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 213 5e-54 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 213 5e-54 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 213 5e-54 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 213 6e-54 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 213 6e-54 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 213 7e-54 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 213 7e-54 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 212 7e-54 UniRef50_B2JDH4 Transcriptional regulator, AraC family n=33 Tax=... 212 8e-54 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 212 9e-54 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 212 9e-54 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 212 9e-54 UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=V... 212 1e-53 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 212 1e-53 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 212 1e-53 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 212 1e-53 UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=... 212 1e-53 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 212 1e-53 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 212 1e-53 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 212 1e-53 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 212 1e-53 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 212 1e-53 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 211 2e-53 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 211 2e-53 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 211 2e-53 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 211 2e-53 UniRef50_Q398W4 Transcriptional regulator, AraC family n=30 Tax=... 211 3e-53 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 211 3e-53 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 211 3e-53 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 210 3e-53 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 210 4e-53 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 209 6e-53 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 209 7e-53 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 209 7e-53 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 209 1e-52 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 209 1e-52 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 209 1e-52 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 208 1e-52 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 208 2e-52 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 208 2e-52 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 208 2e-52 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 208 2e-52 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 208 2e-52 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 207 3e-52 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 207 3e-52 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 207 3e-52 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 207 4e-52 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 207 4e-52 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 206 6e-52 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 206 6e-52 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 206 8e-52 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 206 8e-52 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 206 9e-52 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 206 1e-51 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 206 1e-51 UniRef50_UPI000197C3AF transcriptional activator RhaS n=1 Tax=Pr... 205 1e-51 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 205 1e-51 UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=S... 205 1e-51 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 205 2e-51 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 204 2e-51 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 204 2e-51 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 204 2e-51 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 204 2e-51 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 204 2e-51 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 204 2e-51 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 204 3e-51 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 204 3e-51 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 204 3e-51 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 204 3e-51 UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=F... 204 3e-51 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 204 3e-51 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 204 4e-51 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 204 4e-51 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 204 4e-51 UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabac... 203 4e-51 UniRef50_Q3JM08 Transcriptional regulator, AraC family n=53 Tax=... 203 5e-51 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 203 5e-51 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 203 5e-51 UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Cl... 203 5e-51 UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Kle... 202 7e-51 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 202 7e-51 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 202 1e-50 UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC ... 202 1e-50 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 202 1e-50 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 202 1e-50 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 202 1e-50 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 202 1e-50 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 202 1e-50 UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella... 202 1e-50 UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=C... 202 1e-50 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 202 1e-50 UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=V... 202 1e-50 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 202 1e-50 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 202 2e-50 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 201 2e-50 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 201 2e-50 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 201 2e-50 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 201 2e-50 UniRef50_D0XE38 Putative uncharacterized protein n=1 Tax=Vibrio ... 201 2e-50 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 201 2e-50 UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacterial... 201 2e-50 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 201 2e-50 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 201 3e-50 UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=P... 201 3e-50 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 201 3e-50 UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria Re... 201 3e-50 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 201 3e-50 UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostri... 200 4e-50 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 200 4e-50 UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Pae... 200 4e-50 UniRef50_B2N4J2 HTH-type transcriptional activator RhaR n=2 Tax=... 200 4e-50 UniRef50_B4D507 Transcriptional regulator, AraC family n=1 Tax=C... 200 5e-50 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 200 5e-50 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 200 5e-50 UniRef50_B1Y6T0 Transcriptional regulator, AraC family n=4 Tax=B... 200 6e-50 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 200 6e-50 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 199 6e-50 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 199 6e-50 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 199 7e-50 UniRef50_C6DJR4 HTH-type transcriptional activator rhaS n=40 Tax... 199 7e-50 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 199 7e-50 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 199 7e-50 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 199 7e-50 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 199 7e-50 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 199 7e-50 UniRef50_C6C3E6 Transcriptional regulator, AraC family n=8 Tax=E... 199 8e-50 UniRef50_C6BWQ4 Transcriptional regulator, AraC family n=1 Tax=D... 199 8e-50 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 199 8e-50 UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium el... 199 8e-50 UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=E... 199 8e-50 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 199 8e-50 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 199 9e-50 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 199 9e-50 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 199 1e-49 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 199 1e-49 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 199 1e-49 UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminoc... 198 1e-49 UniRef50_C7PEC1 Transcriptional regulator, AraC family n=1 Tax=C... 198 1e-49 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 198 2e-49 UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 T... 198 2e-49 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 198 2e-49 UniRef50_A9KJU1 Transcriptional regulator, AraC family n=1 Tax=C... 197 2e-49 UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=C... 197 3e-49 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 197 3e-49 UniRef50_D1PSQ0 AraC-type sugar metabolism regulator n=1 Tax=Sub... 197 3e-49 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 197 3e-49 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 197 4e-49 UniRef50_Q7MG26 AraC-type DNA-binding domain-containing protein ... 197 4e-49 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 197 4e-49 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 197 5e-49 UniRef50_C6I5T7 AraC family transcriptional regulator n=18 Tax=r... 196 5e-49 Sequences not found previously or not previously below threshold: UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 205 2e-51 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 204 2e-51 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 198 2e-49 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 197 4e-49 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 197 4e-49 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 197 4e-49 >UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16 Tax=Enterobacteriaceae RepID=C0Q3L5_SALPC Length = 322 Score = 265 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 217/271 (80%), Positives = 236/271 (87%) Query: 12 FFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 FF +QQAV VADRYPQDVFAEHTH+FCELV+VWRGNGLHVLN+RPYRITRGDLFYI A+ Sbjct: 52 FFTDEQQAVTVADRYPQDVFAEHTHEFCELVMVWRGNGLHVLNERPYRITRGDLFYIRAE 111 Query: 72 DKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 DKHSY SVNDLVLQNIIYCPERLKLN++WQ IPGF + PHWRLGSMGM QARQVI Sbjct: 112 DKHSYTSVNDLVLQNIIYCPERLKLNVNWQAMIPGFQGAQWHPHWRLGSMGMNQARQVIN 171 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKS 191 QLEHES+ P ANEMAELLFGQLVM L RHRY +D LP TS ETLLDKLIT LA SL+ Sbjct: 172 QLEHESNGRDPLANEMAELLFGQLVMTLKRHRYATDDLPTTSRETLLDKLITALANSLEC 231 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 PFALD FC + CSERVLRQQFR QTGMTINQYLRQVR+CHAQYLLQHS L++S+IS +C Sbjct: 232 PFALDAFCQQEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQC 291 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 GFEDSNYFSVVFTRETGMTPSQWRHL++Q D Sbjct: 292 GFEDSNYFSVVFTRETGMTPSQWRHLSNQSD 322 >UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax=Enterobacteriaceae RepID=RHAR_ENTS8 Length = 283 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 176/277 (63%), Positives = 201/277 (72%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 MA QL L K DFFA+ Q V VADRYPQ+VFAEHTH+FCELV+VWRGNGLHVLNDRPYRI Sbjct: 1 MASQLVLRKADFFATPTQPVVVADRYPQNVFAEHTHEFCELVLVWRGNGLHVLNDRPYRI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GDLFYI A+D+HSY SVNDLVL NIIYCPERL+LN++W+ + G P WRL S Sbjct: 61 TCGDLFYIRAEDRHSYQSVNDLVLHNIIYCPERLQLNVNWRDLLENPRGVNGDPRWRLSS 120 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 GM QARQVI QLEHES + ++ +AE LF QL + L RHRY LD Sbjct: 121 QGMVQARQVIDQLEHESPKQDALSHCLAESLFLQLAITLRRHRYQPSGGTGPGEGETLDL 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L+ L SL PF L FC +ER LRQ FRQQTGMTI+QYLRQ+R+C AQYLL+HS Sbjct: 181 LMAALGNSLDVPFDLQHFCSHYQIAERPLRQLFRQQTGMTISQYLRQLRICQAQYLLRHS 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LLIS+I+ CGFEDSNYFSVVFTRETG+TP WR Sbjct: 241 SLLISEIAARCGFEDSNYFSVVFTRETGVTPRVWRQQ 277 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 13/291 (4%) Query: 1 MAHQL-KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYR 59 M + L K+D+F D + V R PQ+ F H H+F E+VI+ G G+H+ + Y Sbjct: 1 MPEMIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYE 60 Query: 60 ITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA-------- 111 + GD F I D H Y +++ L L NI++ P L L++ ++ G++A Sbjct: 61 LVTGDTFVIGGDRPHDYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRK 120 Query: 112 ---GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDS 168 +L + + + + L+ E Q MA L QLV L+R Y Sbjct: 121 RHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRC-YIRTR 179 Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 P + + + I+ + P +LD + + S R + F + +YL QV Sbjct: 180 NPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQV 239 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 R+ A LL+ + I+DI+ + GF DSNYFS F G++P ++R Sbjct: 240 RIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 1/281 (0%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 + LKL +D+F +++ AV VA+R PQ F H HDF ELVIVWRGNGLH+ ND PYRIT Sbjct: 3 SRGLKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYRIT 62 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSM 121 GDLFY+ ADD+HSY SV+ L L NI+Y RL L DWQ +P + Q +WRLG Sbjct: 63 CGDLFYVTADDRHSYESVHALELDNILYIRPRLTLPTDWQNLLPDGGVAQQQRYWRLGEQ 122 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 GMA R + L E + P + +++E+L Q+ +L R+R+ + LD L Sbjct: 123 GMAIIRDRVESLTQECMKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ-LDLL 181 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + L S+ PF L+ FC + S R LR +F+QQTGM+++QYLRQ+R+C A LL++ R Sbjct: 182 MNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELLRYDR 241 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 IS+++ +CGF+DSNYFSVVF + G+TPS +R + Sbjct: 242 QTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQTRS 282 >UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax=Enterobacteriaceae RepID=RHAR_YERP3 Length = 290 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 148/278 (53%), Positives = 184/278 (66%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M L L D+ S+Q VAV +RYPQ+ F EHTH FCE+VIVWRGNGLHVLND PYRI Sbjct: 1 MRAPLLLESRDYLLSEQMPVAVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GD+FYI A D HSY SV+DLVL NIIYCPERL LN W +P Q +WRL + Sbjct: 61 TCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTT 120 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 GMAQAR +I QL ES + ++ ++ E+L QL ++L RHRY ++ LD Sbjct: 121 QGMAQARPIIQQLAQESRKTDSWSIQLTEVLLLQLAIVLKRHRYRAEHAHLLPDGEQLDL 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 +++ L SL + F + FC + ER L+Q FRQQTGM+I+ YLRQ+R+CHA+ LL+ S Sbjct: 181 IMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGS 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 ISDI+ CGFEDSNYFS VFTRE GMTP +R Sbjct: 241 EHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRF 278 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 13/274 (4%) Query: 12 FFASDQQAVAVAD--RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 FF ++ + A ++ H H+F E+ + +G H++ D Y + + Sbjct: 7 FFMAEGRPFASERIAGVNDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFP 66 Query: 70 ADDKHSYASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 H ND+ + ++ + PE ++ + S ++L A Sbjct: 67 PFVMHHSFEENDVPFRRLLLYFNPEVIRSPQILRTL------SERARVYKLPRAQSAPIY 120 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 ++ + E + ++ E+ L+ L + L R+ SD + +I L Sbjct: 121 NLMKDILQEQERDDLYSRELITLMVNALALQLVRN---SDEAARPEQRNRVTDIINYLHE 177 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 L++ + S+ L ++F++ T TI QY+ +RV HAQ LLQ S I++I Sbjct: 178 HFTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEI 237 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 S GF + +F+ V+ TGM+PSQ + ++ Sbjct: 238 SKRVGFSNVTHFNRVYKSVTGMSPSQNKQAYLKR 271 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 112/283 (39%), Gaps = 6/283 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADR---YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRP 57 M +L+L + S + V ++ + + H HD E+V + +G ++ + Sbjct: 1 MDERLRLKEKVQHGSAVFPINVYEKIFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKE 60 Query: 58 YRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR 117 Y + +++ H + ++ I++ L + + + Sbjct: 61 YFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLV 120 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL 177 S R++I + + + + + L RY + S + Sbjct: 121 QNSFEDEHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLK 180 Query: 178 LDKL---ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 L+K+ + + ++ S +D A+ S+ + F++ T +T Y+ + RV A Sbjct: 181 LEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAI 240 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 L++++ L IS+I+ E GF + +YF VF G+TP +++ Sbjct: 241 ELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKN 283 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 107/270 (39%), Gaps = 6/270 (2%) Query: 15 SDQQAVAVADR---YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 + + V + Y V H H+ E++ + RG G ++ Y++ G+ ++++ Sbjct: 17 TPDFPLFVHEDIFVYRNGVVNPHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSG 76 Query: 72 DKHS-YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI 130 HS + + I++ L F + + ++ R I Sbjct: 77 SIHSGLEMIKRSIGYAIVFDLRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDI 136 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT--SDSLPPTSSETLLDKLITRLAAS 188 ++ + + L + + ++ + + ++ + + Sbjct: 137 CRIIEVFKEKSYGYELYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQN 196 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 +LD+ + S+ L + F++ M+ +Y+ +VRV A LL ++ + +S+I+ Sbjct: 197 YNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIA 256 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 ECGF++ +YF VF + TP ++R N Sbjct: 257 FECGFDNISYFIKVFKKYMHTTPLKFRKQN 286 >UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV7_TOLAT Length = 275 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 144/277 (51%), Gaps = 3/277 (1%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 KL +FF +++ + V R PQ+ F EH HDF ELV+V G G+HV + R ++RG Sbjct: 1 MYKLNHAEFFDNNKV-INVLPRLPQEPFPEHCHDFHELVLVKSGCGIHVCDGRAIHVSRG 59 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 + Y+ +D H + +++L L N+++ P+ + + + + + Sbjct: 60 SVIYLKDEDVHCFDHMDNLCLTNVLFMPDEFHSSPHLTSLLTE-SCRSDSGQMMVCPQIQ 118 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT 183 QA ++ Q+ E+ + +++ M E LF QL +LL R R + + L++ LI Sbjct: 119 QQAELLLTQIHDENDRQDAYSSLMVETLFSQLAVLLWRDRQLNKKYRSEEQDNLIN-LIN 177 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + + ++ + D + R L ++ ++ TG+T N YL +VR+CHA YLL HS+ Sbjct: 178 YINENYQNELNWSELSDSFNIPLRTLNRKLQEHTGLTPNNYLGRVRLCHASYLLSHSQDA 237 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 ++DI+ CGF DSNYFS F + +TP Q+R Sbjct: 238 VTDIAFSCGFNDSNYFSSKFHQAFNVTPMQYRKRYRN 274 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 93/272 (34%), Positives = 150/272 (55%), Gaps = 4/272 (1%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +L +DFF + V R PQ+ F EH+HDF EL+IV +G G H+LND P + + Sbjct: 1 MFQLNCNDFFNNSDATVCTEVRAPQEDFPEHSHDFHELMIVTKGAGQHILNDVPINLAQN 60 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 + YI D+H + ++L L NI++ +L + + +P S Q W + + M Sbjct: 61 YICYISPKDRHLFEQSDNLHLTNILFQKNKLAYSPLLKSVLPK--ESDAQQSWYISTETM 118 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT 183 + ++ Q+EHESS H + M E LF QLV+ ++R R TS S +S+ + K+I Sbjct: 119 KKVCTLMAQIEHESSLHSVESRLMTEALFQQLVVEISRGRLTSQS--NNASDNSILKIID 176 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + + F + D+ S R L ++ +Q T ++ N Y+ +VR+ HA LL +S L Sbjct: 177 WIQNNYAEEFNVGDISDQFEISSRTLSRRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLS 236 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++DI+ + G++DSNYFS F R T TP+++R Sbjct: 237 VTDIAFQVGYKDSNYFSTKFKRFTNKTPTEFR 268 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 92/273 (33%), Gaps = 5/273 (1%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 ++ V + +PQ H H+ EL+ + G +N+ GD+ Sbjct: 8 EIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGDI 67 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 +++ H D V + +++ L + + + Sbjct: 68 LLVNSGGLHGGTPY-DCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTA 126 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHR----YTSDSLPPTSSETLLDKL 181 ++ +L L Q + LL + R L + LL + Sbjct: 127 IHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNV 186 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + A L + A S + F + TG T Y+ RV A LL Sbjct: 187 LNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIG 246 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 I+DI+ CGF D +YF+ F + G++P Q+ Sbjct: 247 HSITDIAMLCGFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 89/267 (33%), Positives = 137/267 (51%), Gaps = 4/267 (1%) Query: 11 DFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 DFF S +V + R PQ F EH HDF E+VIV G G HV N +PY ++ G + ++ Sbjct: 19 DFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHVFNGQPYTLSGGSVCFVRD 78 Query: 71 DDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 D+H Y +L L N++Y P+ + +P HWR+ + QA + Sbjct: 79 HDRHLYEHTENLCLTNVLYRSPQAFSFLSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPL 138 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASL 189 + +LE A E+LF QL++LL R S ++ L++LI L Sbjct: 139 VERLEALRECSDVHAVASMEMLFMQLLILL---RSGSQMQGGGHADERLNQLIAWLEDHY 195 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 ++ D+ S R L +Q +Q+TG+T +YL ++R+ A+YLL+HS ++DI+ Sbjct: 196 AEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMKARYLLRHSEESVTDIAY 255 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRH 276 +CGF DSN+FS +F RE +P R Sbjct: 256 QCGFGDSNHFSTLFRREFSWSPRDIRQ 282 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 101/282 (35%), Gaps = 9/282 (3%) Query: 3 HQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITR 62 H++K F + ++ + Q H H+ E++ V +G G+ ++ PY Sbjct: 55 HEIKEHAGRDFPFNIYPCSIPADFRQ--VPVHWHEDMEIIAVKKGRGVVTVDMEPYEARA 112 Query: 63 GDLFYIHADDKHSYAS--VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP-----H 115 G+ + H + + +NII+ P L H Sbjct: 113 GEAVVVFPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLH 172 Query: 116 WRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 G + IG L+ + + + L+ + P S Sbjct: 173 ITGGLPDYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSR 232 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + +L+ + ++ + S + F+Q G+ QYL + R+ A Sbjct: 233 ERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAG 292 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +L + ++ ++ CGF++ +YF+ +F R+ G TP ++R Sbjct: 293 MLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 20/296 (6%) Query: 1 MAHQLKLLKDDFFASDQQAVAVAD--------RYPQDVFAEHTHDFCELVIVWRGNGLHV 52 M + + +F+ VAV H HDF ELVI+ GNG+ V Sbjct: 1 MELVFQAKSEFYFSDPDCPVAVKRVAASNAAQHLHDLTTEPHRHDFAELVIITAGNGVQV 60 Query: 53 LNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFN---- 108 ++ Y ++ GD+F I + H + N + + N++Y P RL L W +PG+N Sbjct: 61 VDGGEYAVSLGDVFLIQGNGAHYFLERNRVSMINVLYDPARLPLPFGWLRRLPGYNVIFE 120 Query: 109 -------ASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR 161 A + H +L + +A+A +++G+LE E Q P A A +L++ ++R Sbjct: 121 LEPSVRSAETFKHHLKLSAAELAEAVEIVGKLERELEQDTPGAELAAFQRLLELIVFISR 180 Query: 162 HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTI 221 Y + ++ + ++I+ L + + L++ A+ S L + FR TG + Sbjct: 181 C-YDAPPAENLAAVMRVGRIISLLESEFMREWRLEELAKLAATSPNNLLRLFRTVTGTSP 239 Query: 222 NQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 YL +VR+ A L+++ +++I+ +CGF DSNYF+ F G++P ++R Sbjct: 240 VDYLIRVRLRRAAEALKNTPGAVAEIAADCGFADSNYFARKFRAAYGVSPREFRKR 295 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 7/251 (2%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNIIYC 90 H H+ ELV V +G GL + Y RGD+F H+ + +NII+ Sbjct: 36 LHWHESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFE 95 Query: 91 PERLKLNLD---WQGAIPGFNASAGQPHWRLGSMG-MAQARQVIGQLEHESSQHVPFANE 146 PE L D + +P + P + QA + +LE + P Sbjct: 96 PELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYEL 155 Query: 147 MAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSE 206 + + + + LL S T+ L ++ L+A P + S S Sbjct: 156 LVKGALLRFLALLIAQGRQCLS-TETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSA 214 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 + FRQ TG + +L + R+ A L+ + + I++ CGFE+ +YF+ F Sbjct: 215 SHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAH 274 Query: 267 TGMTPSQWRHL 277 GMTP +R Sbjct: 275 FGMTPRDYRKK 285 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 112/280 (40%), Gaps = 11/280 (3%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYR 59 M++ + L V+ R V H H + E+ + G +N Y Sbjct: 8 MSNTMILK------DKSVQVSRIRRSSSFVMKRPHYHSYYEIYYLLSGKCKMFINQDIYY 61 Query: 60 ITRGDLFYIHADDKHS--YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR 117 + GD+ I + H Y + I + + + L G F QP Sbjct: 62 LEPGDMTIIPPLEVHKALYEPSWEAERFGIYFSRDTVTSFLSLCGR-EAFGHIFSQPKRT 120 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSET 176 + S + +++ Q++ E Q + L Q++++L R + + +E Sbjct: 121 IPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSLLHQILVVLGRCQEARREGHALEEAEE 180 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 + + + + L + A+ S ++F+ TG+ +YL +RV A + Sbjct: 181 AMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYLNYIRVQKASDM 240 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 L+++ L ++ ++ CGF D NYF VF R TG++P ++R Sbjct: 241 LRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSPREYRK 280 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 109/284 (38%), Gaps = 12/284 (4%) Query: 4 QLKLLKDDFFASDQQAVAVADR----YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYR 59 Q K+ ++ + H HD E++++ +G+G+ ++ Y Sbjct: 10 QYKIYHENKIHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSGIVSVDLTTYS 69 Query: 60 ITRGDLFYIHADDKHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAG----- 112 ++ GD+ ++ H+ + ++ + +NI++ LK + Sbjct: 70 VSAGDIIFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNI 129 Query: 113 QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT 172 P + I +++H + Q++ L + + P Sbjct: 130 CPVINNQTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPIN 189 Query: 173 SSE-TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + +++ +A + + A++ + S+ + F++ G++ QYL R+ Sbjct: 190 QKSLKKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLE 249 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 A LL + I DI+ GF + +YF+ F ++ G++P ++R Sbjct: 250 IAAELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 9/284 (3%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M ++ L D F + + + ++HTHDF E+ V G+G H + D+ I Sbjct: 1 MNWRIIELSGDIFFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPI 60 Query: 61 TRGDLFYIHADDKHSYAS---VNDLVLQNIIYCPERLKLN----LDWQGAIPGFNASAGQ 113 RGDLF I H + N LV+ N I+ L+ + S+ Sbjct: 61 KRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPS 120 Query: 114 PHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS 173 W + ++ + E + P + Q++ +L R+ + + Sbjct: 121 AKWLQYQDKFDKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPT 180 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + +D I + + + + + + S ++ F++ TG+T Q+L+ +RV Sbjct: 181 NN--MDDAIQYINDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRC 238 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LL+ + + I + + + G++D +F +F ++TG+TP ++R Sbjct: 239 CELLKSTEISIQEAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_UPI000197C3B0 transcriptional regulator, AraC family protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3B0 Length = 285 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 104/282 (36%), Positives = 158/282 (56%), Gaps = 1/282 (0%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 + L + D+F + V + R Q+ F H+H+F E VIV+ GNGLH N Y I Sbjct: 2 IQSILSINSSDYFIRPENTVTIEMRDSQEDFIVHSHNFNEFVIVFSGNGLHHWNGIDYPI 61 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T GDLFYI+A+D H Y SVN+L L N++Y P + + +P HW+L Sbjct: 62 TCGDLFYINAEDCHGYHSVNNLKLVNVLYKPNEFFIKKSIEKYVPLSYQPITSRHWKLPP 121 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 ++ +I ++ E + + + E LF QL + + R RY D P + +D+ Sbjct: 122 SSLSTLTPIIEKMALECQKPDIPSIHLCEGLFLQLAIYIYRLRYQPDQAPISLLHQ-MDQ 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 LI L S+ + F+L+KF E S R L++ F+ +TGMT+ +YL+Q+R+C A LL+ + Sbjct: 181 LINCLNLSINTSFSLEKFAQEHQMSARSLQRLFKSKTGMTVMEYLQQLRLCQAALLLRST 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 L IS+++ +CG+EDSNYFS VF ++ MT S +R QKD Sbjct: 241 SLSISEVAGQCGYEDSNYFSSVFHKKMKMTASAYRCCFLQKD 282 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 229 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 140/290 (48%), Gaps = 22/290 (7%) Query: 11 DFFASDQQAVAVAD---------RYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRI 60 D+F +D V V +P DV EH HDFCEL +V G G+HVL + + Sbjct: 9 DYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGESFHV 68 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--------- 111 + GD+F + H + L L N++Y PERL L L +PG++A Sbjct: 69 STGDVFVLQGRQVHCFRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEPTFRST 128 Query: 112 --GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 RL + A ++ ++E+ES + L +L++LL+RH SD+ Sbjct: 129 HRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYAQSDT- 187 Query: 170 PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + + + +L++ L P+ L++ ++A S L + FRQ TG + +L +R Sbjct: 188 RESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFLIGLR 247 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 + A+ LL+ S L +++I+ ECGF D N+F F + G+TPS +R Sbjct: 248 IEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 129/288 (44%), Gaps = 14/288 (4%) Query: 5 LKLLKDDFFASD-QQAVAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITR 62 ++ + +F D + + D EH H DF ELVIV G H++N + I + Sbjct: 1 MEYMYLHYFTQDPSFPFFIQYGFHDDAMPEHFHHDFFELVIVLNGTATHIVNSEEFFIKK 60 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR----- 117 GD+F + D H Y ++ + NI+Y PERL + PG+ A + Sbjct: 61 GDVFVFNMDLSHGYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYS 120 Query: 118 ------LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 L + ++ ++ E + M F ++V+ L+R + L Sbjct: 121 FSNTLSLSISSLEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQYIIENKL-L 179 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + L K I L + +P L+K DEA S R + F++ G T + +RV Sbjct: 180 HDTFVHLAKAILFLEDNYLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVN 239 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 HA LL++S L I+DI+ E GF DSNYFS F + TG+TP ++R Sbjct: 240 HACSLLKNSNLCIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 4/271 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L DFF S +VA+ R PQ F EH HDF E+VIV G G+HV N +PY IT G + Sbjct: 4 LHSVDFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVC 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ D+H Y ++L L N++Y P+R + +P HWR+ + Q Sbjct: 64 FVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSVLQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 RQ++ Q+E + ++ + E+LF Q LL R +S +S + L+ L+ L Sbjct: 124 VRQLVAQMEQQEGENDLPSTASREILFMQ---LLLLLRKSSLQENLENSASRLNLLLAWL 180 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 D D+ S S R L +Q +QQTG+T +YL ++R+ A++LL+HS ++ Sbjct: 181 EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT 240 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 DI+ CGF DSN+FS +F RE +P R Sbjct: 241 DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQ 271 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 111/287 (38%), Gaps = 12/287 (4%) Query: 2 AHQLKLLKDD--FFASDQQAVAVADRYPQD--VFAEHTHDFCELVIVWRGNGLHVLNDRP 57 +Q ++ ++ +D P D H H+ EL+++ +G GL +N Sbjct: 3 KNQYEIYHENKKHTPNDFPYNTYLCSIPLDFKSVNLHWHNEVELIVIKKGQGLVNVNLVT 62 Query: 58 YRITRGDLFYIHADDKHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAG--- 112 Y + GD+ ++ HS + + + +NI++ LK + Sbjct: 63 YTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFKSSLLKSSGYDLCNDKFIQPLLSGNL 122 Query: 113 --QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP 170 P +I +++ + + Q+ LL + + P Sbjct: 123 NIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQIFYLLISNCGLNQIKP 182 Query: 171 PTSS-ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + + +++ +A + ++++ S+ + F++ GM+ QYL R Sbjct: 183 ISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYR 242 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 + A LL + I +I+ GF++ +YF+ F ++ G+TP ++R Sbjct: 243 LEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 10/253 (3%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLVLQNIIYC 90 H HD EL++V G + ++ + Y + G+ ++++ + HS V +++ Sbjct: 35 LHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94 Query: 91 PERLKLNLDWQGAIPGFNASAGQP-----HWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + H R + ++ Q+ + Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFCDEA 202 + L ++ L S + P +++ +I + + P L K + A Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELA 214 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 SE + F++ T + +Y+ RV A L+ + I +++ + GF +YF+ V Sbjct: 215 RMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTV 274 Query: 263 FTRETGMTPSQWR 275 F + G TP ++R Sbjct: 275 FRQRFGCTPREYR 287 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 14/284 (4%) Query: 5 LKLLKDDFFASDQ-QAVAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITR 62 + +K +F +D+ + Y + + HTH DF ELVIV G H++++ + I + Sbjct: 1 MAEMKLSYFTNDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKK 60 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA----------- 111 GD+F I+++ H Y + D + NI+Y E L L GF+A Sbjct: 61 GDVFVINSNTCHGYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEHS 120 Query: 112 GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 + + L + + ++ L E + LF LV+ L R +S Sbjct: 121 FKSNLTLKPLDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDFGNS-SE 179 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + K I+ + ++D + S R + F + T Y+ +R+ Sbjct: 180 KVDVINIAKSISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIR 239 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 A LL+ + L IS I+ +CGF DSNYFS +F + +TP Q+R Sbjct: 240 RACSLLKETTLPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 111/294 (37%), Gaps = 14/294 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYP--QDVFAEHTHDFCELVIVWRGNGLHVLNDRPY 58 M + ++ +D V P ++V H HD EL+ RGN + Sbjct: 1 MTNPYQIKQDVPHRDQDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETV 60 Query: 59 RITRGDLFYIHADDKHSYASVNDL--VLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW 116 + GDL +++ H+ + ++ +++ + + + N A + Sbjct: 61 KPEPGDLMFVNKGMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRF 120 Query: 117 R-----LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 + + ++ Q+ E Q + + L++ L+RH + Sbjct: 121 FPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGS 180 Query: 172 TSS-----ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLR 226 + +LI + + + + SE + F++ TG T +Y+ Sbjct: 181 ADTVGAELTDRFKELIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVN 240 Query: 227 QVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +R+ A+ LL HS I++I+ + GF NYFS +F + +PSQ R ++ Sbjct: 241 LLRINAAEQLLIHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRYAR 294 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 12/282 (4%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 +L +D+ + V V H H+F EL V G G H LN Y ++ Sbjct: 4 KQPPRLTNEDYRLQPRAPVQVFHGIHPGTIPLHWHEFYELSYVVGGEGEHRLNGSAYPLS 63 Query: 62 RGDLFYIHADDKHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG 119 G LF + D H SV D L + N+I+ + H +L Sbjct: 64 SGTLFLLTPADFHELVSVEDKPLEIYNVIFTEAMM-----DDNLYHWLFGGKLVLHAQLE 118 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-- 177 M Q ++ E+ + +L++ LNR + +LP + Sbjct: 119 EMQHRQIFADYERMREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQL 178 Query: 178 ---LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 L + + + + L+ +A S + F + G + +YL+ VR+ A+ Sbjct: 179 NVNLQRALIYIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAE 238 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LL+ S L +++I GF +F VF + GM+P Q+RH Sbjct: 239 SLLRVSSLPVTEICYASGFNTLGHFERVFRQRKGMSPRQYRH 280 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 6/270 (2%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + ++ + + + P +H+HDFCE++ V G G +L + +R+ GDL Sbjct: 10 RSERESLVQPELIYTGLLEDAPNWFNIQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDL 69 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ H S L+ I L + +P S + + Sbjct: 70 VVVNPGTLHEERSDAKAPLRLI-----FLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYK 124 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 + +L E+S + F E+++ L L++L+ R + S+ K+ L Sbjct: 125 MDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRINPEDEAALSQE-CQKIKEYL 183 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + SP LD + S+ L F++QTG++ +YL R+ A LL + L +S Sbjct: 184 DQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETELPVS 243 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++S G+E+ YFS VF R G++P ++R Sbjct: 244 EVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 100/256 (39%), Gaps = 10/256 (3%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN----DLVLQNII 88 EH HD E+ + G + + D+ YRI GDL I + H + + Sbjct: 30 EHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERILVN 89 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 + E + L + A P RL + +Q++ ++ E Q E Sbjct: 90 FRTEVVSALLPGREE-ELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYEEYC 148 Query: 149 ELLFGQLVMLLNRHR-----YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 +LL +L++ L R + + + ++ + A +L + Sbjct: 149 QLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLANRFH 208 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S L F + TG+T+ Y+ +VR+ A LL+ + L +++I+ G++ +F VF Sbjct: 209 LSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRVF 268 Query: 264 TRETGMTPSQWRHLNS 279 + ++P +R Sbjct: 269 KKAKAVSPQSYRREQR 284 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 109/276 (39%), Gaps = 9/276 (3%) Query: 13 FASDQQAVAVADRY---PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 F ++ + R + + H HD E+ + G + + DR + + G L I+ Sbjct: 8 FDYPDRSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLIN 67 Query: 70 ADDKHSYASVN--DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 D H + D V + + + L + + G + S Sbjct: 68 RQDVHRTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMN-NNYVIPFLSAEQQYVE 126 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDS---LPPTSSETLLDKLITR 184 ++ ++ HE + L L++ +R+ ++ PP+ + +++ Sbjct: 127 VLLDKMIHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQY 186 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + ++P L S+ L + F+Q TG T +Y+ +R+ AQ LL+ + + Sbjct: 187 INTNYQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKV 246 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 DIS GF ++F VF T +P +R LN++ Sbjct: 247 IDISEAVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 7/256 (2%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLVLQNIIYCP 91 H HD EL + G ++ + DR YR+ GDL ++ + H D + P Sbjct: 33 HLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVLYINP 92 Query: 92 ERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 E G G P RL S +++G + +E ++ + Sbjct: 93 ELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGSSWLLR 152 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSS---ETLLDKLITRLAASLKSPFALDKFCDEASCSE 206 +L++ R R+ + ++ L + + L + + S Sbjct: 153 HRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEAFRISP 212 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 L + F+Q TG T + YL +RV AQ LL+ S I+DI+ GF + ++F +F R Sbjct: 213 HYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGKMFKRT 272 Query: 267 TGMTPSQWRHLNSQKD 282 ++P +R + Sbjct: 273 VQLSPRAYRQQYRMRS 288 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 7/267 (2%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F V+ +P+ H H E++ + G L LN ++ GDL +IHA Sbjct: 15 FDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGI 74 Query: 73 KHSYASVNDLVLQNIIYC-PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 H + D V + I++ LK+N I ++ + L + + + + V Sbjct: 75 LHGGTPI-DCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNL-ELQTVCN 132 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL----LDKLITRLAA 187 L +Q + + L+ ++ HR S TS +++ + Sbjct: 133 YLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQ 192 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 P L+ A + + + FR T + YL R+ + L + I++I Sbjct: 193 QYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEI 252 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQW 274 + CGF D +YF F + G+TP Q+ Sbjct: 253 ALNCGFNDISYFIKTFKKYKGVTPKQY 279 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 94/287 (32%), Gaps = 11/287 (3%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + D F V + Q H H E ++V RG+ + + + GD+ Sbjct: 54 RQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVLADGDV 113 Query: 66 FYIHADDKHSYASVNDLVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQPHWRL----- 118 + + HS A+ + I++ + L+ + + A Sbjct: 114 ALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAIAH 173 Query: 119 GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL- 177 + ++ + + ++ L R + P + Sbjct: 174 DHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRREMDDRR 233 Query: 178 ---LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 L ++T + A L L A+ SE + F++ T QY+ + RV A Sbjct: 234 ADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAA 293 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 LL+ I+ I + GF D +YF VF TP +R +K Sbjct: 294 DLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLKK 340 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 5/265 (1%) Query: 17 QQAVAVADRYPQDVFAE-HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH- 74 + ++ R + AE H H E ++ G+ +N Y + GD+ ++ + H Sbjct: 2 KYNISRTKRSYEFHMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHR 61 Query: 75 -SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 +Y S I + E L ++ + + ++ ++I ++ Sbjct: 62 TTYHSSPVNERVTISFDGEYLD-SMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRI 120 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRLAASLKSP 192 E+E + F+ M + F +L++ L+R + E ++ + ++P Sbjct: 121 EYEETGQDGFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNP 180 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 L++ + + S ++F+ TG +YL +R+ A LL HS +++I+ CG Sbjct: 181 ITLEEVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCG 240 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHL 277 F D NYF F + G++P +R + Sbjct: 241 FGDGNYFGDAFRKAKGVSPRAFRKM 265 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 3/260 (1%) Query: 20 VAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 ++ R V H H + E+ + G ++ Y + GD I H Sbjct: 23 ISRIRRSSSYVMKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALY 82 Query: 79 VNDLVLQNI-IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHES 137 L + +Y + GF P + ++ L HE+ Sbjct: 83 EEGLQAERYDMYFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHEN 142 Query: 138 SQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP-TSSETLLDKLITRLAASLKSPFALD 196 Q +++ + L Q+++L+ R + T SE + K + + LD Sbjct: 143 GQEDAYSHVQQQSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLD 202 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 ++ S ++FR TG +Y+ +RV A LL+++ ++ I+ CGF D Sbjct: 203 AMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDG 262 Query: 257 NYFSVVFTRETGMTPSQWRH 276 NYF VF + TG++P ++R+ Sbjct: 263 NYFGDVFKKLTGLSPREYRN 282 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 1/273 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++L + + S +AV H HD ELV + RG GL +ND Y + RGD Sbjct: 1 MELYHLNDYCSPDLPLAVWPVQKAGAIGLHRHDCFELVFITRGTGLCRINDLSYPVLRGD 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 ++ ++ D H Y + NI++ E L+ + + + + ++L + Sbjct: 61 VYILNPHDTHCYEMASSCTFYNILFRRELLQHEPALTPLLDDWESRTDRKLYQLENDETD 120 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 ++ E + +P LF ++ L R +PP + K+ Sbjct: 121 AEEFRFQEIIVELKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSA-SKVFEY 179 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + A L S +L + A S FRQ TG ++ ++ +R+ A+ LL+ +L I Sbjct: 180 INAHLGSTISLRELAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTI 239 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +I+ GF D+ +FS VF ++TG++P ++R L Sbjct: 240 GEIALRLGFYDTCHFSRVFRKKTGLSPREYRQL 272 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 17/264 (6%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS--YASVNDLVLQNIIYCP 91 H HD+ ++ V +G LH + + Y I +GD+F I HS + D+ + + P Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWR-----------LGSMGMAQARQVIGQLEHESSQH 140 + Q F A ++ L S+ R V+ + E + Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERR 166 Query: 141 VPFANEMAELLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKLITRLAASLKSPFALD 196 PF + L+ +L R ++ +++ + + L+ Sbjct: 167 TPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLN 226 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 C ++ S F++ TG T N+YL +R+ A +L+ L ++D+ GF + Sbjct: 227 DLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNEL 286 Query: 257 NYFSVVFTRETGMTPSQWRHLNSQ 280 +YF +F + TG++P+ +R + Sbjct: 287 SYFCRIFKKYTGISPTDFRKQAMK 310 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 13/285 (4%) Query: 5 LKLLKDDFFASDQQA-VAVADRYPQDVFAEHTH-DFCELVIVWRGNGLHVLNDRPYRITR 62 ++ + ++F SD+Q + + H H DF ELVIV GN H++N I + Sbjct: 1 MRSVHLNWFTSDEQFLFYIGYGGHDEDMYLHDHVDFSELVIVLNGNATHIVNTEVSFIKK 60 Query: 63 GDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA----------- 111 GD+F I H+Y +D + NI+Y P+ L G+ A Sbjct: 61 GDVFVIDGATSHAYKDPHDFRICNIMYRPDILTSAGPDLRTSIGYQALFVLEPFYRNIQP 120 Query: 112 GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 L + + + E + + M F +LV+ L+R D Sbjct: 121 FNSKLSLPIPSLEYVSSLAAFMIEEYTNKLQGYQTMLRSRFMELVVYLSRQYQNQDQQGI 180 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 + L I+ + P ++ D++ S R L + F+ T YL ++R+ Sbjct: 181 QGNLMHLANAISFMEDHYLEPLTREQIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLE 240 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 HA +LL+ + + I+++S + GF DSNYF+ FT+ G+ P +R Sbjct: 241 HACHLLKTTPVPITEVSYKSGFNDSNYFTRQFTKVYGLAPKVYRR 285 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 105/284 (36%), Gaps = 10/284 (3%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M Q+K+ ++D +A + F+ H H EL G+ +N Y Sbjct: 1 MEQQMKMFQEDRNLPFSVYIAQ-----DEKFSWHCHKHMELDYCSEGHCTIKVNGESYDC 55 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLK---LNLDWQGAIPGFNASAGQPHWR 117 GD IH + H+ +D L + L + F +G+ R Sbjct: 56 QPGDFVIIHTMEDHTLIRNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRR 115 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE-- 175 + + ++ ++ E + P + +L L R + + + Sbjct: 116 IRVPKGSLLESILSEILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDL 175 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + +I + +++ ++ A S + F++ G T +Y +R+ A+ Sbjct: 176 ERIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEK 235 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 LL + I++I+ E GF YF+ VF +ETG P+ +R Sbjct: 236 LLITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 98/247 (39%), Gaps = 3/247 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCP-E 92 H H F E+ + G ++ Y+ +GDL + + H + + I+ Sbjct: 28 HVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVISFRN 87 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 + Q + ++ +L E+ + ++ Sbjct: 88 EATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIKVGL 147 Query: 153 GQLVMLLNRHRYTSDSL--PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR 210 +L++ + R + +++ ++ ++ T + +L+ D+ + S L Sbjct: 148 IELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSYLS 207 Query: 211 QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT 270 ++F+ TG +Y+ VR+ +A LL + I+DI+ ECGF DSNYF F + G++ Sbjct: 208 KKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKGIS 267 Query: 271 PSQWRHL 277 P ++R Sbjct: 268 PHKYRKN 274 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 5/254 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA--SVNDLVLQNIIYCP 91 H H E ++ G + D Y+I GDL ++ +D H + S + + Y Sbjct: 36 HYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHERIVLHYDL 95 Query: 92 ERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELL 151 + + ++ P +L + L E + P + Sbjct: 96 PFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQLHVRNM 155 Query: 152 FGQLVMLLNRHRYTSDSLPP---TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERV 208 ++++ RH SLP T + + +I + + P LD+ + S+ Sbjct: 156 ATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQFFISKGH 215 Query: 209 LRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETG 268 L + F++ TG +QY+ R+ A+ LL+ + I+ IS CGFE+ ++F VF +G Sbjct: 216 LSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGKVFKELSG 275 Query: 269 MTPSQWRHLNSQKD 282 ++P +R L + Sbjct: 276 LSPRDYRKLEQNQK 289 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 222 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 5/263 (1%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 V + +P+ H H+ CE++ V G L+ +RI G I H Sbjct: 18 PYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHG 77 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 ++ +++ L + + + S A+ + Sbjct: 78 GTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDA-KAVID 136 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE----TLLDKLITRLAASLKS 191 + P ++ + + S +S+ +I+ + + + Sbjct: 137 AMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRK 196 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 L++ +E + + F++ TG T +YL R+ A L+ + + DI+ +C Sbjct: 197 NITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKC 256 Query: 252 GFEDSNYFSVVFTRETGMTPSQW 274 GF D +YF VF G+TP + Sbjct: 257 GFNDYSYFIKVFKSMKGVTPRDY 279 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 222 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 100/269 (37%), Gaps = 5/269 (1%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 + + + +P+ V + H H E++ + G+ L+++ + + D+ ++H+ Sbjct: 15 YEFPFEFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGI 74 Query: 73 KHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQ 132 HS +D V Q I++ N G + S Q I Sbjct: 75 LHSGIP-HDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISV 133 Query: 133 LEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL----LDKLITRLAAS 188 L + F L+ + Y ++ T + L +++ + + Sbjct: 134 LFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKN 193 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 +P L + S S + + F + T T YL + R+ A L + I++I+ Sbjct: 194 YANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIA 253 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHL 277 GF D +YF F + GMTP +++ Sbjct: 254 YRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 93/271 (34%), Gaps = 8/271 (2%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 DF + V A EH+H F EL V +G G + + + + DL I+ Sbjct: 13 SDFLKAQLLYVTCATSDKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILIN 72 Query: 70 ADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 + H+ + + I E ++ + A + L + Sbjct: 73 PNIPHTEFGNKEQPWEYIALGIEGVQFQYSEK------EAPYSYSVFSLSRE-HREIPWY 125 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAAS 188 + L E + + L +++ + R P T + + Sbjct: 126 LSTLVKEIQTQQEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEH 185 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 LD ++ L F+ G++ YL Q RV A+YLL+ + ++ I Sbjct: 186 YHEDITLDTLSALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIG 245 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 GF +YFS F R TG TP+ +R Sbjct: 246 EISGFSSQSYFSQTFRRLTGTTPNAYRKKKK 276 >UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=Pectobacterium RepID=RHAR_PECCP Length = 284 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 130/274 (47%), Positives = 178/274 (64%), Gaps = 1/274 (0%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 LKL +D+F +D+ V VA+R+PQ VF H HDF ELVIVWRGNGLH+ ND PYRITRGD Sbjct: 8 LKLQTEDYFLTDKNVVMVAERHPQPVFPLHHHDFDELVIVWRGNGLHLWNDVPYRITRGD 67 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 +FY+ A+D+HSY SV+ L L NI+Y RL L+ DWQ +PG Q HW LGS GM Sbjct: 68 MFYVSANDRHSYESVHGLELDNILYIRNRLTLSADWQRLLPGGEHPQSQRHWCLGSEGMD 127 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 R+ + L E + + +++E L Q+ +L R+R+T D+ P + LD L+ Sbjct: 128 TLREKVDALRQECMKSDALSLQLSEALLLQIALLAARYRHTPDN-PQLADAHQLDMLMNA 186 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L AS+ +PF + FC++ S R LR +F++QTGM++ YLRQ+R+C A LL++ I Sbjct: 187 LRASIAAPFRFEAFCEQHHFSARSLRSRFKEQTGMSVPHYLRQLRLCKAMELLRYDLQTI 246 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 DI+ CGFEDSNYFSVVF + G++PS +R Sbjct: 247 GDIAALCGFEDSNYFSVVFHQAFGVSPSAYRQRF 280 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 105/286 (36%), Gaps = 14/286 (4%) Query: 6 KLLKDDFFASDQQAVAVAD----RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 KL ++ ++ V Y F H H E + G+ ++ N+ + + Sbjct: 12 KLENREYARNNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVK 71 Query: 62 RGDLFYIHADDKHSYASVNDL--VLQNIIYCPERL---KLNLDWQGAIPGFNASAGQPHW 116 GD+ +++ + HS + ND I + P + K ++ I S P Sbjct: 72 AGDVIFVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFV 131 Query: 117 RL--GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY---TSDSLPP 171 Q ++ +LE + + E +L L R Y + + Sbjct: 132 YFEGSKKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQ 191 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 T + + + + + K LD + + S+ + F++ T YL R+ Sbjct: 192 TKNIMQIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQ 251 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + L + I++ + GF S+Y+S +F + TP+++++ Sbjct: 252 RSIPYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNN 297 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 8/271 (2%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F + V Y EH+H+F E+ V G G+H + + G LF+I Sbjct: 15 FFEPGVPLYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQ 74 Query: 73 KHSYAS-----VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP--HWRLGSMGMAQ 125 H + L++ N + L D W + Sbjct: 75 SHVFRPKTPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGE 134 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITR 184 + +L E + P + L +++ L RH+ + + L +D+ I Sbjct: 135 YHAMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAF 194 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + S L + +A SER + FR+ TGM++ +Y++ +R+ A LL + Sbjct: 195 IDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSV 254 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 DI+ G+ D +F +F ++TG+TP Q+R Sbjct: 255 EDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 101/261 (38%), Gaps = 10/261 (3%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL--VLQN 86 + + H H+F E++ + +G G ++ + + GD+ I H + +N Sbjct: 34 NSVSLHWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYEN 93 Query: 87 IIYCPERLKLNLDWQGAIPGFNASAG-----QPHWRLGSMGMAQARQVIGQLEHESSQHV 141 I++ + + F + + Q + +++ S+ Sbjct: 94 ILFSVDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETP 153 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKF 198 + + + + +L + D + L++ +++ + + K ++ Sbjct: 154 KGYHLALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDI 213 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 SE + F+ G++ YL R+ A LL + + ++ CGF + +Y Sbjct: 214 ASYCGFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSY 273 Query: 259 FSVVFTRETGMTPSQWRHLNS 279 F+ +F ++ G+TPS++R ++ Sbjct: 274 FNRMFKKKYGVTPSRYRETHN 294 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 93/283 (32%), Gaps = 13/283 (4%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + D F V + Q H H E ++V RG+ + + + + G + Sbjct: 10 RQHGDATFHIQAYHVVLTPGPHQQTVNLHWHSEAEFIVVTRGSVCLQVGSQRHVLADGGV 69 Query: 66 FYIHADDKHSYASVNDLVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG---- 119 + + HS AS + I++ + L+ + + RL Sbjct: 70 ALLSGGELHSMASPGKGPSECKAIVFGLDLLEGPSGD-RVQQSYLSPLASGKLRLPGAIA 128 Query: 120 --SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL 177 + ++ + + ++ L R + + P + Sbjct: 129 HDHPVRPHLAARLCEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDDR 188 Query: 178 ----LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 L ++T + L L A+ SE + F++ T QY+ + RV A Sbjct: 189 RADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARA 248 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LL+ I+ I + GF D +YF VF TP +R Sbjct: 249 ADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRK 291 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 103/264 (39%), Gaps = 10/264 (3%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVL 84 + H H+ E+ ++ G + ++ + + +GDL I HS + +V Sbjct: 4 SYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVS 63 Query: 85 QNIIYCPERLKLNLDWQGAIPGFNA-----SAGQPHWRLGSMGMAQARQVIGQLEHESSQ 139 ++++ + L + I N P + G+ G + ++ L + Sbjct: 64 DSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNG 123 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS---ETLLDKLITRLAASLKSPFALD 196 + L +L LL ++ + E L ++++ + ++ + ++ Sbjct: 124 KQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLTIE 183 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + S+ F++ GMT +Y+ R+ A L + + DI+ E GF + Sbjct: 184 ELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNI 243 Query: 257 NYFSVVFTRETGMTPSQWRHLNSQ 280 +YF+ VF G+TP +R + + Sbjct: 244 SYFNKVFKERFGVTPGSYRKNSRE 267 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 99/271 (36%), Gaps = 17/271 (6%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 A Y + + H H E++ V + G + D + GD+ H S + Sbjct: 35 ARYYDYDRFTYPWHFHSQYEIIYVKKSCGRCFVGDCIECFSEGDVVLFGPSLPHYMRSDD 94 Query: 81 DLVLQN---------IIYCPERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMAQARQV 129 N I + ++ + D + + R + Sbjct: 95 AYHGDNPRLRVQGTIIQFEENFMQYSFDHYPQFHQIRVLLKEARRGVVFHTADAGAVRDM 154 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD---SLPPTSSETLLDKLITRLA 186 + L L + + R S PT+ +DK+I+ + Sbjct: 155 VSAFPEL---KGFGQITGLLDLLQALAVSVPRRMLASPCYYEKFPTAGNKRIDKIISFIN 211 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 ++ LD+ + A+ + + F+ TG T QY+ +R+ +A LL + IS Sbjct: 212 SNYTRSLKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVADMRIGYACKLLTIGDMEISQ 271 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+ ECGF+ +F+ F + TG+TP+Q+R+ Sbjct: 272 IAVECGFDSIPHFNRTFKQLTGLTPTQYRNQ 302 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 13/292 (4%) Query: 1 MAHQLK---LLKDDFFASDQQAVAVAD--RYPQDVFAEHTHDFCELVIVWRGNGLHVLND 55 M ++ + K+ + + VAD H H+ E+ + G G +++N Sbjct: 1 MPSIMREEAIPKEKVILAKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIING 60 Query: 56 RPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH 115 + + +GD+ I+++D H DLV+ I + NL + + G+ + Sbjct: 61 QKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFSPFREMGKHY 120 Query: 116 WRL---GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT-----SD 167 L M + R ++ +L+ E + L Q + +NR S+ Sbjct: 121 MNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEGEGGSE 180 Query: 168 SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 + ++I + + P+ L++ S + F++ GM YL Sbjct: 181 PSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLIH 240 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +R+ A +L+ + + D++ ECGF F+ +F + GMTP + +S Sbjct: 241 IRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQHS 292 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 89/253 (35%), Gaps = 9/253 (3%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV--NDLVLQNIIYCP 91 H H E+ V G L ++ + G+ +I D H+ + +++ Sbjct: 39 HWHKEAEIFYVMEGEVLFQIDSEYIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDV 98 Query: 92 ERLKLNLDWQ---GAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 L + G I F R+ S + + I ++ S Sbjct: 99 GMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAAI 158 Query: 149 ELLFGQLVMLLNRHRYTSDSLPPTSSE----TLLDKLITRLAASLKSPFALDKFCDEASC 204 + ++ ++ +++ L K+I + + P L + D Sbjct: 159 KGHLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILYIQSHYHRPIRLSELADLIPM 218 Query: 205 SERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFT 264 SE + F+ TG T Y+ RV A LL+ ISDI+ + GF +YF VF Sbjct: 219 SEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALDVGFGHISYFVRVFR 278 Query: 265 RETGMTPSQWRHL 277 + TPS++R Sbjct: 279 KIMNCTPSEYRKK 291 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 5/268 (1%) Query: 17 QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 + R H H E+ + G + + ++ Y I GDL I+ D H Sbjct: 18 EFYYHRIHRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKT 77 Query: 77 ASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 + D + I+ + L + + +P RL A Q++ ++ Sbjct: 78 SGHGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMA 137 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSD---SLPPTSSETLLDKLITRLAASLKS 191 E + M ++L +L++ R +++ ++ + ++ + Sbjct: 138 DEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYAD 197 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 L + S L + F++ TG TI YL R+ AQ LL + L I DI+ Sbjct: 198 KITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESI 257 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNS 279 GFE +F F + MT SQ+R +NS Sbjct: 258 GFESLTHFDRTFKKIMNMTASQYRKINS 285 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 6/279 (2%) Query: 7 LLKDDFFASDQQAV--AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +L +F ++ + + ++ A H H+ EL + G + +N Y +G Sbjct: 1 MLHPKYFIAEHSFSIQYMQRKGFTEMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGT 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPER-LKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 + I+ D H +S + I+ L Q Sbjct: 61 MIIINPHDLHRTSSTEVQEFERILINFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQ 120 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY---TSDSLPPTSSETLLDK 180 A ++ +++ E ++ L QL+ + R + + P + + + Sbjct: 121 AAVEHMLMEMKKECKLKKEGHEDVVRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISE 180 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 + + + S + LD + S L + F++ TG + +Y+R +R+ A+ L+ + Sbjct: 181 IASYINCSFQETMTLDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDT 240 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 I DI+ + GF+ ++F+ VF G+ P Q+R + Sbjct: 241 DEKILDIAADTGFKHISHFNKVFKEIVGIPPLQYRKKSR 279 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 112/289 (38%), Gaps = 13/289 (4%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQD-VFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 + L+L + + V Q F H H E+ + G + +N Y++ Sbjct: 9 KNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQVNQNLYQL 68 Query: 61 TRGDLFYIHADDKHS--YASVNDLVLQNIIYCPERL----KLNLDWQGAIPGFNASAGQP 114 +GD +++++ HS ND + P + K ++D P N Sbjct: 69 GKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLNTDNFTS 128 Query: 115 H-WRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD-----S 168 +R G+ G ++++ ++ ++ + +L LL S Sbjct: 129 FVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQLPSGAG 188 Query: 169 LPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 L + L I + +S P LD+ + S+ + F++ T +YL + Sbjct: 189 LAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQTPFEYLLRY 248 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 R+ + LL I++I+++ GF S+Y+S VF + G +P +++ Sbjct: 249 RIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKN 297 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 22/290 (7%) Query: 11 DFFASDQQAVAVAD----------RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 ++F + + V HTHDFCEL ++ RG+ +H L + I Sbjct: 22 NYFDNPYHPLTVRRVKAGSDSEITHEHDLTEVRHTHDFCELALITRGSAMHWLEGAEFPI 81 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--------- 111 T GD+F + H Y + L + NI++ PE+L L IPG+ A Sbjct: 82 TAGDVFVLQGQQSHYYYDLQKLEMINIMFDPEQLNLPETRLRKIPGYRALFLLEPLFRKQ 141 Query: 112 --GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 H L +A + ++ +L++E + F +LV+ L+R ++S Sbjct: 142 HRFTSHLHLSRSTLAHSERIAVELDNEVRGKMEGYEAAMFAKFVELVVYLSRLYQETES- 200 Query: 170 PPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + + K+I + P+ ++ F A S + FR TG T YL Q+R Sbjct: 201 TNAEALLRVAKVIGSIEDEFTKPWKVEDFAAMAHMSRANFMRVFRTATGETPINYLLQLR 260 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 + + LL ++L IS+I+ E GF DSNY++ F G++P +R ++ Sbjct: 261 IQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQFKASQGISPLAYRRTHT 310 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 8/254 (3%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN--IIY 89 H HD EL+ + G+GL LN R+ GDL ++ H + +L I++ Sbjct: 28 YNHWHDEMELIYIESGSGLVRLNKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFRSIVF 87 Query: 90 CPERLKLNLDWQGAIPGF-----NASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 L N + + ++ + P+ Sbjct: 88 DLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYY 147 Query: 145 NEMAELLFGQLVML-LNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 + LF L + T S + K++ + + P + ++ Sbjct: 148 FVKLKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTAAELTALSN 207 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 SE + F+Q TG T+ Y+ +R+ A+ +L HS +++I+ E GF +++YF F Sbjct: 208 YSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYFIKKF 267 Query: 264 TRETGMTPSQWRHL 277 + TGM+P ++R Sbjct: 268 QQATGMSPHKFRRN 281 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 12/262 (4%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + HTH F EL V G+G ++ D + I + DL I+ + H+ S Sbjct: 22 YSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKS 81 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 + L+ I+ + L +D F++ + + E+ Sbjct: 82 SLEDPLEYIVLGVDGLNFVIDDANEYLLFHSDEMKDRLDF----------YFRTILEETE 131 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP--TSSETLLDKLITRLAASLKSPFALD 196 ++ + L LV+ L+R+ +S + P + + +S + LD Sbjct: 132 NSQKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLD 191 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 K + A ++ F + G++ YL Q R+ +Q LL + + ++ I+ +CGF S Sbjct: 192 KLAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSS 251 Query: 257 NYFSVVFTRETGMTPSQWRHLN 278 +YF+ F + GMTP+ +R Sbjct: 252 SYFTQCFRKSCGMTPTAYRKQF 273 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 94/268 (35%), Gaps = 11/268 (4%) Query: 18 QAVAVADRYPQDVFA---EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 + F H H E++ V +G G GD+F + H Sbjct: 102 FPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQEARSGDIFVMPPGTLH 161 Query: 75 SYASVN--DLVLQNIIYCPERLKLN----LDWQGAIPGFNASAGQPHWRLG-SMGMAQAR 127 + + ++ +NII+ E L D + +P + QP G Q Sbjct: 162 AIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQIS 221 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 + + E S + +L++ L R + T L +++ R+ Sbjct: 222 ACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEA-PERDTPDMERLKRVLQRIEQ 280 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 P + CS + F++ TG + YL + R+ A L+ + I I Sbjct: 281 DYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVI 340 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWR 275 + GFE+ + F+ F + G+TP +R Sbjct: 341 AENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 101/249 (40%), Gaps = 11/249 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH EL G G +L+ + + + D+ ++ +H+ S+N L+ I+ Sbjct: 68 HTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVSG 127 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 +++ + + ++ L E+ + + + + L Sbjct: 128 IEILFGKADSTYAIFNCR---------ENRERMVTLLHMLLAEADRSLDGCETVCQDLLE 178 Query: 154 QLVMLLNRH--RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L++ L R P S ++ L + + +LD + A ++ L Sbjct: 179 VLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAH 238 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F++ G++ YL + R+ ++Y+L ++ ++ IS GF +YFS F + G+TP Sbjct: 239 TFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTP 298 Query: 272 SQWRHLNSQ 280 +++R Q Sbjct: 299 NEYRRQVRQ 307 >UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAR_MANSM Length = 276 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 96/281 (34%), Positives = 154/281 (54%), Gaps = 5/281 (1%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M L+L +F S++ + V R+ Q F H HDF E+VI+ GNG+H ND + I Sbjct: 1 MTDILQLSHHSYFISEESPITVERRHYQPPFPLHRHDFNEIVIISAGNGIHFWNDEIHPI 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 T G++ YI + DKH Y V+ L L NI+Y PE+L L + IP + + R+ Sbjct: 61 TTGNVLYIESGDKHKYGEVDKLKLDNILYRPEKLSLFPIMKDYIP---HNNEKKSLRINQ 117 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + Q + +I QLE ES + + ++E +F Q+++L+ R S + L+ Sbjct: 118 ETLVQLQSLISQLEIESKKTNKSSMHLSEAIFLQILILICR--TQQQENKAYSDISKLES 175 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L + L S+ F L FC + + +R+ F+QQT MTI QYL+++R+C A LL+++ Sbjct: 176 LFSALNQSISQEFYLADFCRQHQLAVSSVRRIFKQQTNMTIAQYLQKLRLCRAATLLRNT 235 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 +++I+ CG+ DSNYFS VF + TP+++R +K Sbjct: 236 SESVANIAIRCGYSDSNYFSSVFGKTFSCTPTEYRSRFIKK 276 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 12/261 (4%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI-- 87 F H HD E + + G+ ++ + + +T GD I H + + + Sbjct: 34 DFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSKISYVAL 93 Query: 88 IYCPERLKLNLDWQGAIPGFNA-----SAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 ++ ++ N I N + R ++G A+ + + Sbjct: 94 VFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSY 153 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD-----KLITRLAASLKSPFALDK 197 + + + + Y S +L + L+ ++I + + K+P ++ + Sbjct: 154 GFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKEVIKYIQTNYKNPISIKE 213 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 D A SE + F+ QTG T QY+ R+ A LL + L I++I+ E GF D + Sbjct: 214 LADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFGDVS 273 Query: 258 YFSVVFTRETGMTPSQWRHLN 278 YF F + ++P+++R N Sbjct: 274 YFIKTFKKFLSISPTKYRKSN 294 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 99/249 (39%), Gaps = 11/249 (4%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 HTH EL G G L + + + D+ ++ +H+ S+N L+ I+ Sbjct: 37 HTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVAS 96 Query: 94 LKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG 153 ++ + ++ L E+ + + + + L Sbjct: 97 MEFLFSKADTNYAIFNCR---------ENRERMVTLLHMLLAEADRSLDGCETVCQDLLE 147 Query: 154 QLVMLLNRHRYTSDSLPPT--SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L++ L R S L + ++ L + + +LD + A ++ L Sbjct: 148 VLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAH 207 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 F+++ G++ YL + R+ ++++L ++ ++ IS GF +YFS F + GMTP Sbjct: 208 TFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTP 267 Query: 272 SQWRHLNSQ 280 +++R Q Sbjct: 268 NEYRRQTRQ 276 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 106/289 (36%), Gaps = 14/289 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYP----QDVFAEHTHDFCELVIVWRGNGLHVLNDR 56 M ++ L + + +A+ ++ F H H E V + G L+ + D+ Sbjct: 1 MKSKILLKEKATHGTALIPIAIRHLNYAEGLENFFYLHWHSEFEFVYILSGAILYSIEDK 60 Query: 57 PYRITRGDLFYIHADDKHSYASVN--DLVLQNIIYCPERLKLNLDWQGAIPGFNASA--- 111 Y + G+ +IH++ H+ S N +++ P N Sbjct: 61 EYCVKAGEGLFIHSNQLHAARSFNGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGD 120 Query: 112 --GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 + +++ +++ +L+ ++V + + ++ L ++ Sbjct: 121 LVFENYFKCEEEWQRLVMKLLSELDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQ 180 Query: 170 PPTSSE---TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLR 226 + + ++ + + K L SE F++ ++ Y+ Sbjct: 181 GRKNRNYKLERMQPVLNYIHENYKEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVI 240 Query: 227 QVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + R+ + LL + I+DI+ GF + +YF+ F + G +PS++R Sbjct: 241 RHRILQSCTLLTETDWKIADIARNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 9/272 (3%) Query: 14 ASDQQAVAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 + + R P H H+F E+ + G +ND Y +++G+L I Sbjct: 3 PNQDLKITRIKRDPYFSMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGA 62 Query: 73 KH--SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI 130 H +Y S I + L+ G QP+ R+ +I Sbjct: 63 LHRTTYISGGSHERICITFSKSFLQPLFQEFGEEAVLKC-FSQPYVRIPQSRREYFEDLI 121 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNR-----HRYTSDSLPPTSSETLLDKLITRL 185 + E ++ +A +L++ + R + + + +++K + Sbjct: 122 SKAHREMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYI 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 ++ +SP L++ + S ++F+ TG +YL +R+ A LL H++L I+ Sbjct: 182 CSNYQSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +I+ GF DSNYF VF R G++P ++R Sbjct: 242 EIALLSGFNDSNYFGDVFKRMKGISPCKYRKN 273 >UniRef50_A6AXJ0 HTH-type transcriptional activator RhaS n=2 Tax=Vibrionaceae RepID=A6AXJ0_VIBPA Length = 278 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 4/269 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L ++FF S + +A R PQ+ + EH+H F EL++V G+G HV+ND P +++ + Sbjct: 4 LKPNEFFVSSEIPIATELRSPQEPYPEHSHAFEELMLVSGGSGTHVINDIPMNLSKNYVC 63 Query: 67 YIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 +I +D+H + +V L L N+++ ++ ++ IP W + A Sbjct: 64 FIKREDRHLFENVEGLHLSNVLFDQSKMAVDSSIAKYIPD--TDQQSRGWFINDQSSETA 121 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLA 186 ++I +L+ E + + + LF L++ L+R R S L S E + ++ L Sbjct: 122 NRLITRLDSEIGTDTFESKIVCQSLFNLLLVELSRGRIYS--LEGESDEDKVLSVMGYLH 179 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 + F L ++A S + L + + TGM+ YL +R+ A L++S I+D Sbjct: 180 QNYAEQFNLQDLAEQAGISTKQLSKILSRLTGMSYPNYLNHIRMSKALEALKYSDRSITD 239 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I+ + G++DSNYFS F + TP + R Sbjct: 240 IAFDVGYQDSNYFSSKFKKVFNATPREVR 268 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 10/262 (3%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND-LVLQN 86 H H F EL+ V+RG+ ++ N+ I G++ ++ + H ++ D + N Sbjct: 66 NPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPETLTDQDCVFN 125 Query: 87 IIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV--------IGQLEHESS 138 I++ + +LD +S S+ + I +L E Sbjct: 126 IMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASADTIERLIVECF 185 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 + + + L +L L R+ S S P + E L+ K+IT + S L K Sbjct: 186 EKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQESPAE-ITLQKV 244 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 ++ S L + +Q TG ++ +R R+ A+Y L+ S L I DI+ G+ D ++ Sbjct: 245 SEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIALILGYNDVSH 304 Query: 259 FSVVFTRETGMTPSQWRHLNSQ 280 F VF +E G TP+++R S Sbjct: 305 FYKVFKQEIGCTPTEYRKHYSH 326 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 11/279 (3%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + ++F ++ A R + H+HD ELV ++ G +++ YR+ G Sbjct: 1 MNGTMSEYFNINKLIREAAFRMDET----HSHDCYELVYLFSGECNILVSHTIYRMVPGT 56 Query: 65 LFYIHADDKHSYASVNDLVL----QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 L I + H + ++ + + + + G + + Sbjct: 57 LVIIPPGEIHKTSYGSNDKVRQQRTALRFSIKDTDWLCSALGK-DFVKDNLTAGIIEVPD 115 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY--TSDSLPPTSSETLL 178 +I ++ +E+ + M + LF + ++ + R + + + + + + Sbjct: 116 KRKEYIENLITRMIYENQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNSTI 175 Query: 179 DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ 238 + T + + LD + S S L ++F+Q TG +YL VR+ A LL Sbjct: 176 QDVATYVYNNYDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLL 235 Query: 239 HSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + I+DI+ CGF DSNYF F R G++P+++RH Sbjct: 236 ETNHSITDIAFACGFNDSNYFGDAFRRIKGISPNKYRHN 274 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 101/271 (37%), Gaps = 12/271 (4%) Query: 23 ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL 82 R Q H HD EL + G+ ++ + + GD +I++ H + Sbjct: 33 YQRVFQADIPWHWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPC 92 Query: 83 VLQNI---IYCPERLKLNLDWQGAIPGFNASAGQP-----HWRLGSMGMAQARQVIGQLE 134 + + L +L I Q + + + Sbjct: 93 REARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGV 152 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS----SETLLDKLITRLAASLK 190 S+ F LF +L + R +S P+ + + +++ + A Sbjct: 153 ELCSRKEEFFELRLRNLFSELWESIYRWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFS 212 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 ++ SER + F+ G+T +YL VR+ +AQ LL ++ I DI+ E Sbjct: 213 EKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSILDIALE 272 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 GF S+YF +F +TP+Q+R+L+ QK Sbjct: 273 TGFGSSSYFGKIFRSHHRLTPAQYRNLSRQK 303 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 99/257 (38%), Gaps = 10/257 (3%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNI 87 H H+ EL+ + +G + ++ + GD+ + HS + +NI Sbjct: 35 EVPLHWHNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDSCEYENI 94 Query: 88 IYCPERLKLNLDWQGAIPGFNASAG-----QPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 ++ + L + FN AG P + + I + ++ Sbjct: 95 LFNLDMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFPD 154 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---LITRLAASLKSPFALDKFC 199 LN H YT +P S+ +DK ++ + + ++++ Sbjct: 155 GYRLKIRACLFNFFFELNAHFYTHTDMPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIA 214 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 S+ + F+ TG + YL R+ A +L+ + + ++++CGF++ +YF Sbjct: 215 QWCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISYF 274 Query: 260 SVVFTRETGMTPSQWRH 276 + F + G++P ++R Sbjct: 275 NRKFKEKYGVSPREFRK 291 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 100/264 (37%), Gaps = 10/264 (3%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 + H+ E+V + RG + + P I D+ I + H + ++ + I+ Sbjct: 38 WHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIV 97 Query: 89 YCPERLK------LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVP 142 + + ++ + + + P L ++ ++ E Sbjct: 98 LSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRILKERENPDI 157 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLI----TRLAASLKSPFALDKF 198 + + LL +L +L++R + + +LI + + + +L Sbjct: 158 GSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDI 217 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 S + F+++ G++ YL ++RV A+ LL+ + ISDI+ GF + Sbjct: 218 ARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQR 277 Query: 259 FSVVFTRETGMTPSQWRHLNSQKD 282 F+ +F + +TP Q+R K Sbjct: 278 FNDIFKKYVKLTPLQYRKNVQVKK 301 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 4/268 (1%) Query: 16 DQQAVAVADRYPQDVF-AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 + A+R H H + E+ + GN ++N Y + GD I H Sbjct: 11 KDYKIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMH 70 Query: 75 S--YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQ 132 Y + + N+ + + P L S+ A ++ Sbjct: 71 RFVYDCNSTVKRYNLFFTMDFAASLFHSDTK-DILEHLFHYPVLHLTSLLQGNATRLFDT 129 Query: 133 LEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 L E+ + + ++ LL R+R S+E + ++ + P Sbjct: 130 LYQETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENAIQASARYISTHFQEP 189 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 +L D S ++F+Q TG+ +YL + R+ A LL H+ L +++I+ CG Sbjct: 190 VSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCG 249 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 F D NYF F +E G++P Q+R Sbjct: 250 FNDGNYFGDAFRKEFGLSPLQYRKRQKN 277 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 121/294 (41%), Gaps = 18/294 (6%) Query: 7 LLKDDFFASDQQAVAVADRYPQD--VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 L D S+ + + + H H+F ELV + +G+GLH + IT GD Sbjct: 5 LKSDQHLESEHFLFHIEPYELKQGTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGD 64 Query: 65 LFYIHADDKHSY--ASVNDLVLQNIIYCPERLK----------LNLDWQGAIPGFNAS-A 111 +F I H+Y + + N+++ P L+ +D+ P + + Sbjct: 65 VFIIEPGMDHAYTVEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVS 124 Query: 112 GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP- 170 Q L M R ++ QL E + + +L ++L+R + + Sbjct: 125 FQAKLTLSPRQMMDIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANNRNHSL 184 Query: 171 --PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 + ++ ++ + P +L++ A S+ FRQ TGM+ ++ Sbjct: 185 PSIQNDGEMIARICEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQ 244 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 R+ A+ LL S I+ I+ + G+ED ++F+ VF + TG TPS +R + Sbjct: 245 RIQLAKQLLAASSDKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMKGRS 298 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 11/267 (4%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 + A A A+ ++ H HDF EL + G +H++ Y +T D H Sbjct: 13 KKIAYAYAEGVNDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHH 72 Query: 76 YASVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 D+ + I+ + P+ + + Q + + Q ++ L Sbjct: 73 SYGEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIP------NQILSLLLSL 126 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 HE + + L++ + R + + P + K + + Sbjct: 127 THEIDVPGKYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRSA---KAVDYIHNHYMEDI 183 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 ++++ + S L +F+ TG TI QYL R+ HAQ L+ + I+ IS E GF Sbjct: 184 SVNQLAEILYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGF 243 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNSQ 280 + +F+ F + TG+ P + + L + Sbjct: 244 SNLTHFNRTFKKITGVAPREKKKLYQK 270 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 5/248 (2%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H H EL + G G ++N +GD+ +I+++D H +LV+ I++ P Sbjct: 56 LHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPS 115 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 L ++L + + S G + S + +++ ++ E + Sbjct: 116 LLSIDLKFDPDLMAPFRSLGNVDRQ--SPVHDELARLLRRMMEEYKARGTSYMSLIRSDL 173 Query: 153 GQLVMLLNRHRYTSDSLP---PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 + + L NRH + L +++ + L + L + D S Sbjct: 174 IRFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRF 233 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 F+Q G + + YL Q+R+ HA +LL+ + I +I+ CGF + + F+ +F + G Sbjct: 234 SALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGA 293 Query: 270 TPSQWRHL 277 +PS+ R Sbjct: 294 SPSEIRER 301 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 98/274 (35%), Gaps = 9/274 (3%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 + + + H H E+ V G + ++ + GD+ I + HS Sbjct: 20 PYRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHS 79 Query: 76 YASV--NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ-----PHWRLGSMGMAQARQ 128 + + N + + L L++ Q ++ + G + Sbjct: 80 IHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIKA 139 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLN--RHRYTSDSLPPTSSETLLDKLITRLA 186 + + + + + + + + LL R+ ++ + +LI + Sbjct: 140 CLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTYRKNEKIRQLIDYIN 199 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 +D S+ F+Q TG + +++ QVR+ A LL HS I + Sbjct: 200 NHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPILE 259 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 I+ E GF + + F+ F R +TPSQ+R ++ Sbjct: 260 IANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTK 293 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 105/274 (38%), Gaps = 8/274 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 +V + + H H+ E++ + G + + +R+ GD I+++ Sbjct: 25 FPCAGYDSVYSSHAINRIPWHWHEELEVIFLPSGTLDVRVPGKRFRMNAGDCLVINSNIL 84 Query: 74 HSYASVNDLVLQNIIYCPERL---KLNLDWQGAIPGFNASAGQPHWRLGSMGMA--QARQ 128 H + N+ L ++++ + + ++ ++ + +S + + RQ Sbjct: 85 HEAETSNECRLHSLVFHTDLISGSDSSVFYKKYMYPLISSCTLDCVLFSAEDTSGVSIRQ 144 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHR---YTSDSLPPTSSETLLDKLITRL 185 + + +L LL + S P + ++I + Sbjct: 145 CFMMAFDALANNREGYEFTVRECLSRLCFLLCTFYKPEISDTSAKPDQDSFRIKEMIHMI 204 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + P L A+ ER + F + G++ QYL + R+ LL ++ I+ Sbjct: 205 QSRYAEPLKLCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGALLLINTNKSIA 264 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +IST CGF+ + FS+ F R+ +P ++R N Sbjct: 265 EISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNK 298 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 5/253 (1%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 ++ H H++ E+ + G H++ D Y + G+L H ND+ + I Sbjct: 37 DNMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRI 96 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 + E ++ N +P + + +++ +L + F Sbjct: 97 VLYFESSEVASKELLDALDENNGMYRP----DAATRQKLHRMLEELIRQYENPSDFYKSY 152 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 L + + H + + ++++ + + + L++ + S+ Sbjct: 153 RRTLLNMFLFTMLMHTRRREPEQMEETG-RTTQIVSYIHSHYQEDITLEQLAQKFYVSQF 211 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L ++F++ T T+ QY+ RV +AQ L + I++IS E GF + +F+ VF T Sbjct: 212 YLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVT 271 Query: 268 GMTPSQWRHLNSQ 280 G TPS +R + Sbjct: 272 GTTPSGYRKHHQN 284 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 9/258 (3%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH--SYASVNDLVLQ 85 Q + H H E + + G + + + G+ +I + H S L Sbjct: 30 QVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSLY 89 Query: 86 NIIYCPER---LKLNLDWQGAIPGFNASAGQPHWRLGSM--GMAQARQVIGQLEHESSQH 140 + P+ +L I F S +L M+ ++ + Q Sbjct: 90 ATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQK 149 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL--LDKLITRLAASLKSPFALDKF 198 + + Q++ L +H ++ + + + + K++ + + + Sbjct: 150 EEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQL 209 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 + SE + F+ MT +Y+ R+ A LL+ + I DIS GF+ +Y Sbjct: 210 ANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSY 269 Query: 259 FSVVFTRETGMTPSQWRH 276 F +F R TPS++R Sbjct: 270 FIKLFKRHKRCTPSEFRR 287 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 6/263 (2%) Query: 18 QAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA 77 + ++++ HTH F EL V G G+ + + + DL I+ +H+ Sbjct: 21 RYISISKYEGDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEHTEK 80 Query: 78 SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHES 137 ++++ + I++ E L + Q A G ++ GS + E Sbjct: 81 TMSNDPMTYIVFGVEGLAFYFNSQNA----ANPKGYSYYNYGSAKTHFI-NFSQIMIKEF 135 Query: 138 SQHVPFANEMAELLFGQLVMLLNRHRYTSD-SLPPTSSETLLDKLITRLAASLKSPFALD 196 + P + L L++ + R ++ S S + A+ LD Sbjct: 136 NARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLD 195 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + ++ L F + G + YL + R+ ++ LL S I+++++ GF Sbjct: 196 LLAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQ 255 Query: 257 NYFSVVFTRETGMTPSQWRHLNS 279 +YFS +F + TGM+P Q+R L Sbjct: 256 SYFSQIFRKNTGMSPLQYRKLKQ 278 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 11/256 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLV---LQNII 88 H H+ EL+ V G L+ + +P+ GD+ ++++ + HS AS+N + ++ Sbjct: 32 PLHWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALV 91 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQ---PHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + P L L + + +Q +L E Q Sbjct: 92 FNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYE 151 Query: 146 EMAELLFGQLVMLLNR-----HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 L L+R R ++ + +L+TRL + + +++ Sbjct: 152 LAVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAAS 211 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S + F++ TG T QY+ R+ A+YLL+++ + ++DI+ E G N FS Sbjct: 212 FVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFS 271 Query: 261 VVFTRETGMTPSQWRH 276 +F + G++P R Sbjct: 272 KLFRQLRGVSPRDLRK 287 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 105/281 (37%), Gaps = 8/281 (2%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 KL K+ ++ + Q H+H+ E + V G+ ++ Y++ +G + Sbjct: 7 KLQKEPYY--PVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQI 64 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPER----LKLNLDWQGAIPGFNASAGQPHWRLGSM 121 ++ A +H + N+ + E+ + +L Sbjct: 65 IFLDAGTRHRLIVSERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLH 124 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 Q + +L E + + M +LL + ++ + + P + + + Sbjct: 125 DTDDTYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPD--QQAYVKRA 182 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + + ++ + L++ F+ TG +I+++L R+ A+ +L+ + Sbjct: 183 LAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTD 242 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + I+DI G YFS F + TPS++R + D Sbjct: 243 ISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQYND 283 >UniRef50_UPI0001744EC9 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744EC9 Length = 291 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 104/288 (36%), Gaps = 10/288 (3%) Query: 1 MAHQLKLLKDDF-FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYR 59 M ++ +D + D+ + + P+ H H EL + G G + D Sbjct: 1 MWSAMRARLEDVQWGPDESFLVRSYNLPRFDVPWHFHPEIELACIVEGEGDRCVGDHLGA 60 Query: 60 ITRGDLFYIHADDKHSYASVN------DLVLQNIIYCPERLKLNLDWQGAIPGFNASAG- 112 T GDL + + H + SV + P L + Sbjct: 61 FTVGDLVLLGPNLPHYWRSVGTGGKNQRARALVLHMRPTSLGQGFWELPECREWKQLLDV 120 Query: 113 -QPHWRLGSMGMAQARQVIGQLEH-ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP 170 + AQ + ++ LE E + + E+ ++L ++ Sbjct: 121 APRGLCFDPVISAQVQPLMESLESSEGTNRLLGLLEILQILAEGADSAVSLTGVGYSPDN 180 Query: 171 PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 + + + ++ L A L P +L + A S+ + ++ TG T+ + ++RV Sbjct: 181 DSRAADRMRRVYDYLYAHLAEPLSLPEIAQVARMSDAAFSRYCKKVTGRTLTSLINELRV 240 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 A L + +S+I+ GF+ + F+ VF GM PSQ+R + Sbjct: 241 ARACKTLVETTQSVSEIAFLTGFQSLSNFNRVFADAKGMAPSQYRSRH 288 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 5/271 (1%) Query: 8 LKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFY 67 + F + V + + H H CE++ + G + ++ + D+ + Sbjct: 10 KQHGTFDFPIEFYHVTPNHSRYNMPYHWHTECEIIRILEGEFILFIDKEKILAKKNDIIF 69 Query: 68 IHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 +H+ H ND + + I++ + L + + + + + Sbjct: 70 VHSGIFHG-GLPNDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPSNVQALN 128 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY----TSDSLPPTSSETLLDKLIT 183 L +A+ L+ + ++ + L +IT Sbjct: 129 NCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNVIT 188 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + ++P L+ + S + + F + T +YL R+ + L + L Sbjct: 189 LIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATELS 248 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 I++I+ CGF D +YF F + G+TP Q+ Sbjct: 249 ITEIALNCGFNDVSYFIKTFKKHKGVTPKQY 279 >UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CUK1_AGRT5 Length = 297 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 106/278 (38%), Gaps = 14/278 (5%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 +D+ + R P+ F H H EL + G+ + D GDL + + Sbjct: 11 PADRSWLLFDRRLPEFPFNWHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGPNLP 70 Query: 74 HSYAS------VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQ 125 H++ S + + ++ + + + G +A+ Sbjct: 71 HAWQSHGLINAPGVHRAVVCWFTRDWIEGLIALTPELSAITPLLVESGHGICFGEDALAK 130 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLI 182 + + L + + + L + +R ++ + + + +++ Sbjct: 131 VGERLATLHKIAPEQQI---LTLLGVLVDLARVSDRRPLSAGEVTASTAPRDRARMQRVL 187 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + A ++ + A S+ L++ F++ T MTI+QY+ Q+RV A LL + L Sbjct: 188 NHIHAHYIGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLAQTDL 247 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 ++ I+ E GF D+ +FS F GMTP +R Q Sbjct: 248 SLARIAEETGFSDAAHFSRQFRAARGMTPGDYRRQFDQ 285 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 111/278 (39%), Gaps = 14/278 (5%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + +D H+HDF E+ + G+G + + DR Y ++ GD+ ++ K Sbjct: 13 LNPTFLFTWKGTRLKDEARYHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQK 72 Query: 74 H---SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFN----ASAGQPHWRLGSMGMAQA 126 H N + C R + + + + P + Sbjct: 73 HQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKL 132 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL------PPTSSETLLDK 180 ++ + E+ M + Q+++LL R + + TS + ++D+ Sbjct: 133 FKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQ 192 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 ++ +LD+ + S + + F+ +TG T ++L +R+ A+ LL++ Sbjct: 193 IVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENG 252 Query: 241 -RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I +++ + G++D +FS +F + GM PS+ R L Sbjct: 253 FDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRRL 290 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 98/272 (36%), Gaps = 6/272 (2%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 V +P+ H H E++ + G ++ Y + GD+ ++++ HS Sbjct: 18 PFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAIHS 77 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 V D + +++ L + L + ++ Q+ Sbjct: 78 GIPV-DCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQMFE 136 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKLITRLAASLKS 191 + L+ + S S + + K++ + Sbjct: 137 IMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKVLFFIETKYME 196 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 +L+ +E+ + F++ T T +YL R+ A ++ I+D++ +C Sbjct: 197 NISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDC 256 Query: 252 GFEDSNYFSVVFTRET-GMTPSQWRHLNSQKD 282 GF D++YF+ VF + GMTP ++ L +K+ Sbjct: 257 GFNDTSYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 7/271 (2%) Query: 17 QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 + + H H+ E++ + G +N Y +T+GD+ I + H + Sbjct: 13 EFPFRLFFNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCF 72 Query: 77 ASVND-LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP-HWRLGSMGMAQARQVIGQLE 134 I + L Q H +G+ A + I ++ Sbjct: 73 FKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEII 132 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRH-----RYTSDSLPPTSSETLLDKLITRLAASL 189 +E S+ + + L +L R+ + D +D + + + Sbjct: 133 NEYSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNY 192 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 + LD S+ + F++ TG+T YL R+ A++ + I++I+ Sbjct: 193 QERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAY 252 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 CGF F+ +F G TP ++R N Sbjct: 253 NCGFNSIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 101/285 (35%), Gaps = 12/285 (4%) Query: 8 LKDDFFASDQQAVAV-----ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITR 62 +D++F Q V +D F H H+ ++ G + + Sbjct: 3 NRDNYFNRKGQESFVDIFKKSDIKNGQNFPRHWHEHLQVYYFISGTAKLECGKNNFEVQA 62 Query: 63 GDLFYIHADDKHSYASVNDLVLQN-IIYCPERLKLNLDWQGAIPGFNASAGQPH-WRLGS 120 DL ++ ++ H S +D ++ I + P L N + Sbjct: 63 NDLVIVNPNELHYLESTSDNLVFYTIRFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLI 122 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-----RYTSDSLPPTSSE 175 + +++ ++ E + LV+ L R+ S+ ++ Sbjct: 123 QNNTELTELVKKVLMEYFNKKIGYELAIKGYIYYLVVTLLRNHVQHILTQSELDDKEATL 182 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + L K + S + F+Q TG T Y+ +R+ + Y Sbjct: 183 IRFQPAFELIEKKYNEKITLSKLANTVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIY 242 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 L+ + I++I+ CGFE+ NYFS +F + +PSQ+R+L Sbjct: 243 YLKQTDYNITEIALMCGFENGNYFSRIFKKYHSTSPSQYRNLYKN 287 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 103/294 (35%), Gaps = 17/294 (5%) Query: 1 MAHQLK--LLKDDFFASDQQAV-AVADRYP--QDVFAEHTHDFCELVIVWRGNGLHVLND 55 M L+ L + +++Q RY + V H HD E G L ++ Sbjct: 1 MDQALRRSLKESKSHGNERQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDT 60 Query: 56 RPYRITRGDLFYIHADDKHSYASVND--LVLQNIIYCPERL---KLNLDWQGAIPGFNAS 110 + + G+ +I D H+ + D ++++ + L + + + Sbjct: 61 DYFPVGAGEAVFIDGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQER 120 Query: 111 AGQPHWRLGSMGMAQARQV--IGQLEHESSQHVPFANEMAELLFGQLVMLLNR-----HR 163 + A + I L S P + ++ + +R Sbjct: 121 KATFPRHIRRETAADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNR 180 Query: 164 YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQ 223 S S +S L +I + + P L + SE + F+ T T Sbjct: 181 SHSSSRSESSKIDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMD 240 Query: 224 YLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 Y+ R+ A LL+ ISDI+ E GF++ +YF VF + +PS++R Sbjct: 241 YINSYRIRQAAELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKR 294 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 9/276 (3%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 S+ + H H+ E++ V G+ +N + + + +I+A Sbjct: 22 TSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFL 81 Query: 74 HSYASVNDLVL--QNIIYCPERLKL--NLDWQGAIPGFNASAGQPHWRLGS--MGMAQAR 127 HS + ND ++I++ P + ++ WQ I + P+ L + Sbjct: 82 HSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKIL 141 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET---LLDKLITR 184 + + QL++++ + ++ P + + ++ Sbjct: 142 AYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQY 201 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + + A SE + + F + T NQYL+Q R+ A +L + + Sbjct: 202 IQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTS 261 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 DI+ +CGF+ S+YF+ F + G TP ++R + Q Sbjct: 262 IDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 101/277 (36%), Gaps = 14/277 (5%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + + H H E++ +G+ +ND P ++ G++ I+ D Sbjct: 10 LNKAFPFRSFVNEGEVLVYPHWHKEIEIIYALKGSLNLGVNDMPIQLKEGEIQVINGGDV 69 Query: 74 HSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA---GQPHWRLGSMGMAQARQVI 130 H + + I + + + + +A+ + +I Sbjct: 70 HYFLASPSSERVVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWPEETVAKMQSLI 129 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT-----------SSETLLD 179 + ESS P + + + ++ L+ R + P + + LD Sbjct: 130 MNIHEESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAVLKSQETLHKLD 189 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 ++ + + + P +L + + S + F++ TGMT +L R+ A+++L + Sbjct: 190 QIFSYVEKHYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRLNKAKWMLLN 249 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 +++++ GF F F R G+ P ++R Sbjct: 250 EAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRK 286 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 99/281 (35%), Gaps = 12/281 (4%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVF---AEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +++ + + V + +D F ++H H+ E + G + R + + G Sbjct: 5 YHENNTHGTAVFPLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPG 64 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWR------ 117 + +I++ + H S + I++ P+ L L Sbjct: 65 EFCFINSGELHEIKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSV 124 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR---HRYTSDSLPPTSS 174 + ++ A+ ++ Q++ L + + S S Sbjct: 125 FSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDS 184 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + L K+I + + P +L S F+Q+ G ++ + R+ A Sbjct: 185 QNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKAC 244 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +L S L +S ++ GF++ +YF F +TP+++R Sbjct: 245 QILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 61/286 (21%), Positives = 106/286 (37%), Gaps = 12/286 (4%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +K+++ Q++++A +P + H H+ ELVIV G G + GD Sbjct: 1 MKVVQRKIIHDAGQSLSLAH-FPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGD 59 Query: 65 LFYIHADDKHSYASV--------NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW 116 + I D H + + + + + P N+D A + Sbjct: 60 MTLIGPDIPHLHLCDSLTGKNGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRR 119 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT---S 173 + A RQ+ Q++ L L S + Sbjct: 120 GVRYSDPALTRQIRKQVQRLDKGQGIGRIRWLLALLDTLARSQETSLIASGPVRNGTALR 179 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + +D + L + L EA + L + FRQ+TG T+ +L +R+ +A Sbjct: 180 RQETVDTVCRYLREHFRENLCLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIRIENA 239 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 LL +RL IS I+ E GF + ++F+ F TG TP ++R Sbjct: 240 CRLLLETRLSISAIAWETGFANLSHFNRQFKSLTGQTPGEYRKNIR 285 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 113/288 (39%), Gaps = 11/288 (3%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFA---EHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 + L + F+ + + + F EH H EL ++ G + + DR Y I Sbjct: 1 MNLSNELFYGDSEDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIA 60 Query: 62 RGDLFYIHADDKHSYASVN--DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG 119 GDL I A++ H + + + Y + + + + + +RL Sbjct: 61 AGDLVLIPANELHKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLA 120 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDS------LPPTS 173 + Q++ L E + P + ++ RH + +PP+ Sbjct: 121 HQERLRFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSP 180 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 + ++ + +A + P LD + S L + F++ TG + +Y+ RV A Sbjct: 181 AAAKAMEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEA 240 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 Q+ L+ + I++I+ E GFE + F VF ++P +R+ QK Sbjct: 241 QHQLRETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 14/277 (5%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 ++ + D V + +D H H EL+ V +G ++ R YR+ D Sbjct: 1 MRYHYEFVETQDDLPVRLFVNSVKD-IRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDD 59 Query: 65 LFYIHADDKHSYASVN-DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 + I++ H N D VL + + PE L D +G + N+ + + R Sbjct: 60 IIAINSMSVHKLECTNLDNVLLTLQFGPELL----DDEGTLFDCNSMSQTEYNRY---RY 112 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET-----LL 178 + R+ + ++ ES++ P + L+ L R+ + P L Sbjct: 113 DRLRRCLARMVWESNKKGPGHRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRL 172 Query: 179 DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ 238 +++I + L D+ S F + G+ +YL +R+ A L Sbjct: 173 NRIIQYVDKHYNEKITLQTIADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLS 232 Query: 239 HSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 + ++ I+ +CGF + F+ F + G TP +R Sbjct: 233 DTDKSMTQIALDCGFANVKLFNQYFKGKYGSTPGSYR 269 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 81/257 (31%), Gaps = 5/257 (1%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LV 83 + H HD + V + G +N+ + GD +I+ H N Sbjct: 35 HRSGHIPLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMAKDANGTTCT 94 Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM--AQARQVIGQLEHESSQHV 141 + P + N + + + ++ P+ L Q I ++ + Sbjct: 95 YLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQCIQTIQRLIDETP 154 Query: 142 PFANEMAELLFGQLV-MLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 + + + LL + ++ + L Sbjct: 155 AYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNERMKPMLNWIHQHYHEKVLLQDIAR 214 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 S + F+ T Y+ + RV + LLQ + I++I+ + GF ++YF Sbjct: 215 AGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIAYKVGFNSTSYFI 274 Query: 261 VVFTRETGMTPSQWRHL 277 +F R TP +R L Sbjct: 275 SMFKRIKNTTPLAYRKL 291 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 93/256 (36%), Gaps = 11/256 (4%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 H+H F EL V G G ++ D+ + I++ DL I+ H+ S L Sbjct: 31 DWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPISKDDLVIINPHINHTEISKGSPPLSYF 90 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 + L + + FN + L E + + Sbjct: 91 TVGVDGLCFSFNGHKEYRIFNCREKKTDLLF----------YFNSLFQELDRQSEGYETI 140 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDEASCSE 206 + L++ L R + L + + L ++ LD + + ++ Sbjct: 141 CSHMLDILILQLRRITDSPFELITAQHPSKECAHIKRYLDSNYGENITLDHLSELSHLNK 200 Query: 207 RVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRE 266 L +F + G++ YL + R+ + LL+++ ISDI+ GF +Y S F + Sbjct: 201 YYLSHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYLSQSFRKS 260 Query: 267 TGMTPSQWRHLNSQKD 282 GMT +R L ++ Sbjct: 261 CGMTAGTYRKLKKKRK 276 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 107/278 (38%), Gaps = 24/278 (8%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN 80 A YP+ + H H E++ V +G G ++ D ++GDL ++ HS S Sbjct: 51 ARFYEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPP 110 Query: 81 D--------------LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMA 124 D + NI + + + ++ + Sbjct: 111 DGGEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNLLEDACRGIKFTITRSG 170 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLN-RHRYTSDSLPPTSS---ETLLDK 180 + +++ Q+ + L Q++ N R T+ P+ S ++K Sbjct: 171 KIIKLLKQI----PSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERMEK 226 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 +I L LD+ + + + F++ TG T +Y+ +R+ +A LL S Sbjct: 227 VIAYLNKHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLNSS 286 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 + IS IS CGFE +F+ +F R TGMTP+ +R Sbjct: 287 MMNISQISATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 212 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 7/254 (2%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 ++ H HD+ EL + G H++ DR Y I G+ H ++ + + Sbjct: 18 DNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL 77 Query: 88 IYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 + K +D + G ++ +++ L E + + Sbjct: 78 LVYFS--KEEVDSVQLLKVL--EKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDY 133 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 L ++ + R+ T + +I+ + + + ++D+ + S Sbjct: 134 IHTLLNMALLTIARNIQTPVKP---EKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPY 190 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 L ++F++ T TI QY+ RV +AQ + + I++IS + GF + +F+ VF Sbjct: 191 YLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVM 250 Query: 268 GMTPSQWRHLNSQK 281 GMTPS +R + + Sbjct: 251 GMTPSNFRKMYKTE 264 >UniRef50_B2JDH4 Transcriptional regulator, AraC family n=33 Tax=Proteobacteria RepID=B2JDH4_BURP8 Length = 339 Score = 212 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 103/280 (36%), Gaps = 16/280 (5%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 D+ A +P H H E+ ++ G + D G+L + + H Sbjct: 12 RDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPGNLVLMGPNLPH 71 Query: 75 SYAS--VNDLVLQ----NIIYCPERLKLNLDWQGAIPGFNASA--GQPHWRLGSMGMAQA 126 ++ S + ++ + + + + A + G+ A+ Sbjct: 72 NWVSEVPEGVTIEQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRGVSFGAQTSAKI 131 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL----PPTSSETLLDKLI 182 + + +L + L ++++ + + P + + T ++ ++ Sbjct: 132 QPLFMELLDA----RGLRRIVLFLSMMEILLNASDRELLASPAYQIDPTSYASTRINHVL 187 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + + +L S + A S + FR+ TG+T QY+ ++R+ A LL L Sbjct: 188 SYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQLLMDDEL 247 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 ++DI + GF + + F+ F GM PS++R D Sbjct: 248 SVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLND 287 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 12/258 (4%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIY 89 H H+ E++++ +G+ + ++ Y GD+ ++ A H S DL I+Y Sbjct: 38 YLHWHEHFEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVY 97 Query: 90 CPERLKL----NLDWQGAIPGFNASAGQPHWRLG-SMGMAQARQVIGQLEHESSQHVPFA 144 + +L + +P P A ++ Q E P Sbjct: 98 NSSLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAY 157 Query: 145 NEMAELLFGQLVMLLNRHRYTSDSLPPTSSE-----TLLDKLITRLAASLKSPFALDKFC 199 M + L+ LL+R +++ LI + A+ + Sbjct: 158 QLMVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAA 217 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 + + + F++ TG T Y+ RV A+ LL L I++I+ G ++SNYF Sbjct: 218 RRMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYF 277 Query: 260 SVVFTRETGMTPSQWRHL 277 + ++ + G+ PSQ R Sbjct: 278 TKMYKKYKGVAPSQLRKQ 295 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 8/268 (2%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND 81 + Y ++ +H HD E+ + G + + + Y + +G L +++ H Sbjct: 18 IIRDYEYNMPTKHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGT 77 Query: 82 LVLQNIIYC--PERLKLNLDWQGAIPGFNASAGQ-PHWRLGSMGMAQARQVIGQLEHESS 138 I+ E + G + + + L + +++ + E Sbjct: 78 SYHDRILIELKEEPFASFFSFFGDLSLKDFFSKHYGVLELEEKDQRRIERLLTSISTEIQ 137 Query: 139 QHVPFANEMAELLFGQLVMLLNR-----HRYTSDSLPPTSSETLLDKLITRLAASLKSPF 193 + +L++ R + + + T+ +D++ + + + +P Sbjct: 138 NKSIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNNCTNPI 197 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 +LD S+ L + F++ TG T+N+Y+ RV AQYLL +S IS+IS + GF Sbjct: 198 SLDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISAQLGF 257 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNSQK 281 E YF VF + T +P ++R N ++ Sbjct: 258 ESITYFERVFKKYTESSPLKYRKQNRKE 285 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 114/287 (39%), Gaps = 12/287 (4%) Query: 5 LKLLKDDFFASDQQAVAVADR---YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 ++ + F +D+ ++ R PQ +H HD+ E+V V+ G G +N Y + Sbjct: 1 MQTIHKRFEETDKFPFSLVYRDTKSPQRELPDHLHDWYEIVFVYSGTGTFFINHSFYEMN 60 Query: 62 RGDLFYIHADDKHSYASVNDLVLQN--IIYCPERLK--LNLDWQGAIPGFNASAGQPHWR 117 GD F I + H + + I + P ++ + + F + ++ Sbjct: 61 PGDAFLIPGNTVHRAFPDEFSPVTSSAIFFAPRFIQPMEFGESHSLLRCFEQARKSKSYK 120 Query: 118 L--GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS- 174 L +I + E +P + ++ LNR T +SS Sbjct: 121 LETSPDKREAFSGLIDVMNEEWLNRLPSYRAAIAVRLYDFLIALNRMALTETEHTRSSSA 180 Query: 175 -ETLLDKLITRLAASL-KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 + + ++ + A + +L +AS + + F+Q TGM +++Y+ ++ Sbjct: 181 EPSWIRTILDYIDAHIGSQEMSLADLSSKASVTYAHFSRVFKQHTGMNVSEYILIKKIML 240 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 A+ L + I+ + CGFE +YF F TGMTP ++R Sbjct: 241 AKEKLMLTGDTIASVCLACGFESESYFYKKFKLITGMTPVEYRRSCR 287 >UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6X4_9BACT Length = 295 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 12/285 (4%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 + D F D Y ++ H+H+F ELV+V G+GLHVL +R Y I GD+F Sbjct: 12 ITSDHHFHRDMPVALRIRDYSENSDLLHSHEFHELVLVLGGSGLHVLQERSYPIYPGDVF 71 Query: 67 YIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA-----------GQPH 115 I H Y ++ L + N +Y P+RL LD ++ G+ + Sbjct: 72 LIKPRQVHGYRNLKKLNIANFLYLPDRLAAELDQLKSLLGYYVFFESDPLLAGRARYKNR 131 Query: 116 WRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 L + QAR++ ++ E + P M+ LLF QL++L+ R S++ + Sbjct: 132 LTLEAERFNQARELTLRMRREQQRQTPGWELMSRLLFLQLMLLICRTFSKSET-TGSEET 190 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + +++ + P AL + CS L + FR+ + YL ++R+ A Sbjct: 191 MKIGRILRYFEENYARPVALAEVARHCGCSVPTLTRFFREAMDDSPIDYLNRLRLDKAAE 250 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 LL+ SRL +++I+ + GF DSNY + FTR ++P +R +NS+ Sbjct: 251 LLRSSRLPVTEIARKTGFCDSNYLTKCFTRRFALSPRAYRQMNSE 295 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 104/267 (38%), Gaps = 6/267 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 V ++ F H HD E++ + G+ +++ + T G F ++ + Sbjct: 15 DYPYSQYHVFNQQTAFQFPIHWHDELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGEL 74 Query: 74 HSYASVN-DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS----MGMAQARQ 128 H S + + I++ E + + F S A+ Sbjct: 75 HYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEIYAEIIS 134 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAAS 188 ++ +L + + F ++L +++ + +S+ ++IT + + Sbjct: 135 LLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMR-REIITYVNDN 193 Query: 189 LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIS 248 L DE SE+ + + F++ +T ++Y+ +R+ +A+ LL + + I+D++ Sbjct: 194 YLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVA 253 Query: 249 TECGFEDSNYFSVVFTRETGMTPSQWR 275 GF + +YF F G TP +R Sbjct: 254 LSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 104/277 (37%), Gaps = 5/277 (1%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFA-EHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +L ++ R H H + EL + G ++ ++D + + +GD Sbjct: 4 RLQPKYHIGDHNFSIQYMSRNGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGD 63 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 L ++ D HS AS L+ + ++ R + R+ Sbjct: 64 LMIVNPHDLHSTASSEKLLFERVLIGFSR-TFIEQGDAGVANLLDHGTSRLIRIPLKHQP 122 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLDKL 181 + +++ + E + + L +L++ L+R + + ++ Sbjct: 123 EIERLLHSMLAECQTEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEI 182 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + ++ L++ + S L + F + TG +Y++ VR+ AQ +L SR Sbjct: 183 AQYIKSNFHEKLTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSR 242 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 + IS GFE +F+ F + G TP Q+R + Sbjct: 243 DSVQIISELAGFEHIAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 113/282 (40%), Gaps = 12/282 (4%) Query: 9 KDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 ++ + +Y H H E++ +++G + ++ + +++GD +I Sbjct: 12 HGNYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKFILSKGDSLFI 71 Query: 69 HADDKH--SYASVNDLVLQNIIYCPERL---KLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 ++++ H + + V+ + ++ + K N Q I L Sbjct: 72 NSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKELSALELTKEDS 131 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLDK 180 + + Q + S ++ + + ++++ + R S + + + + Sbjct: 132 KK----LAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDKERIKR 187 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 ++ + + +L EA ER + F + G++ +YL + R+ A +L++S Sbjct: 188 MLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAEMLRNS 247 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 I++I + GF +YFS VF R G TP ++R + D Sbjct: 248 EQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKNKVKSD 289 >UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787DEA Length = 290 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 8/283 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M ++ D+F D + V + H HDF E+ + G G H + + R+ Sbjct: 1 MKRPMETYYGDYFFRDDTLMYVNRNAENFTGSYHNHDFLEIAYIAEGEGFHHMENSVQRV 60 Query: 61 TRGDLFYIHADDKHSYASVN----DLVLQNIIYC----PERLKLNLDWQGAIPGFNASAG 112 +G +FYI H + + L++ N I+ P+ + D + A G Sbjct: 61 RKGHMFYIPLGMPHVFRPTSSNGKPLIVNNCIFSVKLLPKLIAFASDSRTASLLKQMEDG 120 Query: 113 QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT 172 +R + + ++ L + + + + L QL++ +R S + Sbjct: 121 TLGYRAITDRHDRFEKLFVSLYEQYAMQISGSAVYLHTLLLQLIIEFSRAIEHSQPITSE 180 Query: 173 SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 S ++ + L + + SER L++ FR+ TG + + YL+ VR+ Sbjct: 181 PSHPSFHDVLQYVEGQYMHELTLTRLAQISGFSERHLQRLFRRYTGQSWHHYLQTVRIRM 240 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++ LL+ + IS I+ + G++D + F+ VF R TG+TP Q+R Sbjct: 241 SRELLRTTTDKISMIAEKVGYKDMHSFNSVFKRSTGLTPGQYR 283 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 106/282 (37%), Gaps = 15/282 (5%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 ++ FF DQQ H HD EL V G G + D T GD+ Sbjct: 12 EVENHSFFFIDQQVEV------NLEAKLHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDV 65 Query: 66 FYIHADDKHSYA-----SVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRL 118 I H + + + ++ ++ + L+ ++ + N +G Sbjct: 66 VLIPPSMIHRWEYNADSTDEEGHVRYLMVAFSHSLLERCIEVFPELR--NRLSGVQFPTD 123 Query: 119 GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLL 178 ++ ++I ++ E ++ A ++ + + + + Sbjct: 124 ALKFGLESSRIIRRILSEINEMDELERLSAMFRLLPVIFTSSDYTLAGKPMRIERDVRRM 183 Query: 179 DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ 238 ++ + ALD +E + F++ GMT +Q++ Q R+ A +LL+ Sbjct: 184 QQICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLK 243 Query: 239 HSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +++ +++I GF D +F VFT GM+P+++R Sbjct: 244 NTQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRKQYKN 285 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 107/278 (38%), Gaps = 14/278 (5%) Query: 9 KDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYI 68 ++ + +Y A H H E++ +++G + ++ + + +G+ +I Sbjct: 18 HGNYEFPCAVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFI 77 Query: 69 HADDKH--SYASVNDLVLQNIIYCPERL----KLNLDWQGAIPGFNASAGQPHWRLGSMG 122 ++++ H + + + + ++ + +D + IP N Sbjct: 78 NSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINCKELSALELTEEDS 137 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLD 179 + + + + + ++++ + R + + + Sbjct: 138 QKLIQGYFS-----YADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGSNNTDRERMK 192 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 ++T + + +L EA ER + F + G + +YL++ R+ A LL+ Sbjct: 193 YMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTAAELLRK 252 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 S L +++I + GF +YFS VF R GMTP ++R Sbjct: 253 SELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKN 290 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 107/270 (39%), Gaps = 7/270 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + + H HD E++ V G ++ Y GD F + + Sbjct: 28 DNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNL 87 Query: 74 HSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 H S V P + H + A+++ QL Sbjct: 88 HLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQL 147 Query: 134 EHES------SQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 ++ A +++ Q ++ + + + ++ + ++++ + Sbjct: 148 IDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGR-NIVEKEMVSYIQQ 206 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + +L +F ++ SE+ + + F++ +T++QY+ +R+ +A+ LLQ + L +++ Sbjct: 207 NFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTET 266 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + + G+++ +YF F + G++P ++R+ Sbjct: 267 AMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 10/260 (3%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA--SVNDLVL 84 P+ H H+ E V+ G + +R+ GD ++++ H+ L Sbjct: 34 PEVQVPWHWHEEYECSYVFHGAVTYHTPQGEFRLGEGDGIFLNSGTLHTVEVAPAGSLKK 93 Query: 85 QNIIYCPERLKLNLD---WQGAIPGFNAS--AGQPHWRLGSMGMAQARQVIGQLEHESSQ 139 ++++ + + D +Q + +A R A+ I + Sbjct: 94 SDLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILRRTVSWHAEILSRIKKAVRLCQN 153 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS---ETLLDKLITRLAASLKSPFALD 196 L ++ L +R + ++ + +++ L + + Sbjct: 154 EPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASENARIKQMLRYLQENYTRRVTVA 213 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + A+ ER + F++ ++ QYL + R+ + LL+ S L + +IS CGFE Sbjct: 214 ELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARSCILLRESDLSVLEISNLCGFESP 273 Query: 257 NYFSVVFTRETGMTPSQWRH 276 +YF+ F + TG TP+Q+R Sbjct: 274 SYFTKTFRQITGGTPTQYRR 293 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 108/277 (38%), Gaps = 11/277 (3%) Query: 7 LLKDDFFASDQQAVAVADRYPQ--DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + K + + + V+ + H+H F EL V +G G + + + D Sbjct: 9 IEKPALINNQARLLYVSSSKYEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQEND 68 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 I+ + H+ S + L+ I+ + + + + + Sbjct: 69 FVIINPNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDSLKDYISCNYANY--------KN 120 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLIT 183 + + + ES ++M + L L++ + R + SL + + + Sbjct: 121 EILFYLNLMVKESQAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKEIFMIKN 180 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + + LD ++ ++ L +F+ G++ YL Q R+ ++YLL+ + L Sbjct: 181 YIDRNYHKEITLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLS 240 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 IS IST GF +YF+ F + T +P Q+R + + Sbjct: 241 ISQISTILGFSSLSYFAQAFKKSTNFSPLQYRKNHQK 277 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 26/279 (9%) Query: 15 SDQQAVAVADRY-PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + H H ELV+V + G ++ D ++ GDL + ++ Sbjct: 23 RPEDPIFCEHLAGSSYGTPWHFHPELELVLVKKSQGYRIVGDNITNLSAGDLVLVGSNLP 82 Query: 74 HSYASVN---DLVLQNIIYCPERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMAQARQ 128 H + N +L + + + L + + + + Sbjct: 83 HLWHQDNTAGELEAVVVQFVADFLGREFAGRSDFEPVRQLMDKARRGLHITGDVRDRVAD 142 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS----------SETLL 178 + + +L+ +L+ ++ +S + + Sbjct: 143 RMSAMVGLGPLRR----------LAELLSILDDLAHSPGVAFLSSPGFAPQLGLGDQARV 192 Query: 179 DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ 238 D+++ + L P D+ A+ S + FR +TG T YL ++R+ A LL Sbjct: 193 DRVMQFIHKHLCEPINRDQVAAIAALSPGAFSRFFRSRTGRTFPAYLNELRLGRAARLLS 252 Query: 239 HSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + L + D++ +CGF + +F+ +F + G+TPS++R Sbjct: 253 TTDLRVVDVAADCGFRNLAHFNRLFLKWKGVTPSEFRKR 291 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 103/278 (37%), Gaps = 12/278 (4%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 ++K ++ + + + + F H H E + V G +N+ + +G Sbjct: 36 KVKSFYQNWKLDPELPMDI-YQSTNITFYPHFHAEIEFIYVLSGTIRIGVNEEIRLLRQG 94 Query: 64 DLFYIHADDKHSYASVN-DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMG 122 D+ ++D H + S + + +I PE + + W P+ G+ G Sbjct: 95 DMVICGSNDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRF-----ASPYIPAGTPG 149 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT-----SDSLPPTSSETL 177 + + ++ +L E + P + + +L L R T + S Sbjct: 150 LETVKTILDELIREKDEKKPGYPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRRAR 209 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 + ++++ + + + S + F+ GM YL VRV A++ L Sbjct: 210 MQQILSYIEDHYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQL 269 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 S L I +I+ ECGF F+ VF G PS R Sbjct: 270 LTSDLSIMEIALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 98/270 (36%), Gaps = 7/270 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + H HD E++ V G ++ Y GD F + + Sbjct: 15 DDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPGNL 74 Query: 74 HSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 H S V P + + +++ QL Sbjct: 75 HFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQL 134 Query: 134 EHESSQHVPFANEMA------ELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 +++ Q ++ + + ++ + ++++ + Sbjct: 135 IEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGR-NIVEKEMVSYIQQ 193 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + +L +F ++ SE+ + + F++ +T++QY+ +R+ +A+ LLQ + + +++ Sbjct: 194 NFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEA 253 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + G+++ +YF F + G++P ++R Sbjct: 254 AMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 107/271 (39%), Gaps = 9/271 (3%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 + + + + + H H EL++ ++ Y + GD+ I H Sbjct: 15 RKDMQIRLHNNDVCENYPPHWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVIH 74 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 S II+ +++L + + A AQ +++ ++ Sbjct: 75 ELFSPP--KGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQIHAQIHRLMLEIR 132 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHR----YTSDSLPPTSSETLLDK---LITRLAA 187 E +++P+ F ++++L+ R + + ++K + + Sbjct: 133 DEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYINE 192 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 P +L++ A S+ + F+Q T +YL Q R+ HA++LL L + DI Sbjct: 193 HYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLDI 252 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 S +CGF + + F +F + TG TP++ R + Sbjct: 253 SLQCGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_Q398W4 Transcriptional regulator, AraC family n=30 Tax=Burkholderia RepID=Q398W4_BURS3 Length = 322 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 95/274 (34%), Gaps = 12/274 (4%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 D+ + YP H H EL ++ G + + D G L + + H Sbjct: 13 RDESFKVWSHGYPYRTIRWHFHPEFELHLIVATRGKYFVGDHIGSFGPGHLVLLGPNLPH 72 Query: 75 SYASV----NDLVLQN--IIYCPERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMAQA 126 ++ S + +N I + P ++ +D A + + A Sbjct: 73 NWVSDMAEGETVERRNLVIQFDPAFVRRCMDAFPECRDAQALLDDARRGVGFDAATSAAI 132 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRL 185 + +L + + + +L R S + + T L ++ + Sbjct: 133 APLFDELL---AARGMRRIALFMTILERLCGAAERTLLASPAYDQADVTPTRLSHALSYI 189 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 +L S S + F +QTGM QY+ ++R+ A +L I+ Sbjct: 190 GKNLASELRESDLAQLTGQSVSAFSRAFHRQTGMPFVQYVNRLRIESACQMLLADDANIT 249 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 DI + GF + + F+ F GM PS++R L Sbjct: 250 DICFQAGFNNVSNFNRQFRAVKGMAPSEFRALQR 283 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 13/285 (4%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 ++ F + Q V + EH H + E+V V G G H + D + ++G L+ I Sbjct: 20 EEHFHN-QFPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNKTSKGSLYIIP 78 Query: 70 ADDKHSYASV---NDLVLQNIIYCPERLKLNLDWQGAI----PGFNASAGQPH-WRLGSM 121 H + N L++ N+ P+ + W + G P + Sbjct: 79 IGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDGNPGTYLFLRD 138 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL----PPTSSETL 177 + QL E ++ QL+ ++R T DS ++ + Sbjct: 139 TPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGDQTTGSTRHSE 198 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 ++ + + P +++ D+A S+R + FRQQTGM ++Y++ RV A LL Sbjct: 199 FVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELACQLL 258 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + ++DI+ + G++D +F VF + G+TPSQ+R S K Sbjct: 259 TGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYRPEASNKS 303 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 106/275 (38%), Gaps = 10/275 (3%) Query: 15 SDQQAVAVADRYPQDVFAE-HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 +D A+ R H H+ E+ + G + ++ R Y +T G L +I + Sbjct: 10 TDGIAIDRIRREAAFTMPCKHLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQI 69 Query: 74 HSYASVNDLVLQNIIYCPER--LKLNLDWQGAIPGF-NASAGQPHWRLGSMGMAQARQVI 130 H + + I+ ++ L + G + L G A ++ Sbjct: 70 HQTSQAGPGSHERILISLDQNPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLL 129 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP------PTSSETLLDKLITR 184 E + P + QL +L RH SL +D++ + Sbjct: 130 DGAAKELHEKKPGFRHITMSKLSQLFILAQRHMSGPSSLSADLPLSTQPKHRKVDEVASY 189 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + +L+ ++ L + F++ +G T+N+Y+ +R+ A+ LL ++ + I Sbjct: 190 IIDHYDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSI 249 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +++S G+E YF VF + T +PS +R + Sbjct: 250 TEVSESVGYETITYFERVFHQYTQTSPSGYRKQYT 284 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 6/255 (2%) Query: 27 PQDVFAEHTHDF-CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ 85 P F H HD E+++V G G+ + + Y + GD+ + H S D L Sbjct: 24 PNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGVLHEEQSSIDNPLI 83 Query: 86 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 K + IP + + ++ + ESS Sbjct: 84 TYYCGFSLPKASPSEDWVIPPDVEPVIRSSRVFP-----EIEALMKMIVDESSIKEDGYE 138 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 ++ L +++LL R + S+ L +++ + + +L + + Sbjct: 139 GISRYLINSVILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNFTQNISLKDLGRQFHVN 198 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 + F+ ++ Y R+ A LL + + + +++ G+++ NYFS++F R Sbjct: 199 PYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLGYDNPNYFSIIFRR 258 Query: 266 ETGMTPSQWRHLNSQ 280 TG++P+++R N Q Sbjct: 259 VTGLSPNRFRESNQQ 273 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 111/284 (39%), Gaps = 13/284 (4%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +KL +++ S V + + + F H H EL+++ G+G + + + GD Sbjct: 1 MKLYRENIIPSSNILVVKEEHFTVNEFPLHFHPEYELILILNGSGKRFVGNNIAEFSSGD 60 Query: 65 LFYIHADDKHSYASVN-----DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH--WR 117 L + + H+Y++ + D+ + + + L + A + + Sbjct: 61 LCFFGPNLPHTYSNKHIAGPRDIHQIVVQFNEDFLGKGFFDKAPFKPIRALLDKSIRGFT 120 Query: 118 LGSMGMAQARQVIGQLEHESSQH---VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS 174 + + ++I + + + +L +R S + Sbjct: 121 FTGETLQEVTRMIRAMVEMDETAVVIQLLSVLYTLAKSAEFELLSSRGF---SSKSDRAE 177 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + +++ + + + L+ A S + F++ T T +++L +VR+ HA Sbjct: 178 SERMGRVMDYILRNFREEIPLNVIASVACLSPEAFCRYFKKYTRKTFSEFLIEVRIGHAC 237 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 LLQ L ++ IS + GF + +YF+ F T TP +++ + Sbjct: 238 KLLQQQLLGVNQISMQSGFNNISYFNRKFKSMTKKTPVEYQKMF 281 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 112/286 (39%), Gaps = 15/286 (5%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQ-----DVFAEHTHDFCELVIVWRGNGLHVLND 55 M ++ +D + +V + F EH H+ ++ G G N Sbjct: 1 MKNKENYYCEDM---PDRNFSVDIGLSKIWELGTNFKEHWHEHLQVFYFINGKGFLRCNT 57 Query: 56 RPYRITRGDLFYIHADDKHSYAS-VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP 114 + + I +GD+ I++ D H S NDL I L + + + Sbjct: 58 KSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIRIDLPFLFSDQVDLCQTKYLSPLSENL 117 Query: 115 HWRLG-SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT- 172 + + I + E ++ + LV+LL R+ Sbjct: 118 ILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELAVKANLYNLVVLLIRNYIDKFVTKRQL 177 Query: 173 ----SSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 +++ K+ + ++ + + A S + F+Q TG T +Y+ +V Sbjct: 178 AFKINNDERFYKVFEFVHSNFNKKISTLNLSNIAHVSPYYFCRIFKQITGKTTTEYINEV 237 Query: 229 RVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 R+ + LL++S + I++++ CGF D NYFS +F ++ G++P+++ Sbjct: 238 RLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLFKKKYGVSPTKF 283 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 11/270 (4%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND 81 V + P +F H H E+ V+ G + ++ + GD+F I + HS V++ Sbjct: 41 VENGRPDILF--HWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDN 98 Query: 82 LVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQPH-----WRLGSMGMAQARQVIGQLE 134 + + + L +L ++ R G + + ++ ++ Sbjct: 99 QPHHTDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIF 158 Query: 135 HESSQHVPFANEMAELLFGQLVMLLN--RHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 Q + + +L+ LL R S + ++I + Sbjct: 159 KMIRQKERHYELLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAEN 218 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 ++K + S+ F+Q TG + +++ Q R+ A L++S + +I+T G Sbjct: 219 LTIEKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVG 278 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 F + + F+ F TPSQ+R +S K Sbjct: 279 FNNLSNFNRQFKHYYDQTPSQYRKTHSNKK 308 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 VA++ H+H+F E + G+G + + DL ++ H+ S Sbjct: 46 YVAISKYGTDWKSLPHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEIS 105 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 ++ I+ E +K + QG I S + L HE Sbjct: 106 NPSKPMEYIVLGIEGIKFQAEDQGYI-----------LLNSSAHKSDLHLYFNSLAHEMK 154 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDK 197 P+ N + + L + ++ R+ S+ T + + + + ++ Sbjct: 155 SEQPYRNFVCQNLLNIIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIET 214 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 ++ F++Q G + YL + R+ + +LL + +S IS GF + Sbjct: 215 LSSLVHLNKYYFVHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPS 274 Query: 258 YFSVVFTRETGMTPSQWRHLNS 279 YFS F R T +TP +++ + Sbjct: 275 YFSQAFKRMTNITPQEYKKMYK 296 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 104/266 (39%), Gaps = 6/266 (2%) Query: 18 QAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA 77 +++ + HTH F EL V G G ++ + + + D I+ +H+ Sbjct: 21 ESITKSKYDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEV 80 Query: 78 SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHES 137 S D L+ I+ + L + P + L + + + E+ Sbjct: 81 SSPDSPLEYIVVGIQGLSFS----NLTPVDQGGHPFSFFNLRDE-QKDILRYLNAMVQEA 135 Query: 138 SQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALD 196 + + + L L++ + RH++ + S T + + L + L+ Sbjct: 136 TNQALSYDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLE 195 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 S + F+++ GM+ +YL +R+ ++ LL+ + IS ++ GF Sbjct: 196 ALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTP 255 Query: 257 NYFSVVFTRETGMTPSQWRHLNSQKD 282 YFS F + TG++P+ +R ++ Sbjct: 256 TYFSKQFRKITGISPTDYREKYQKES 281 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 10/257 (3%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV-NDLVLQNIIY 89 ++EH H E+ + G+GL+ + Y GD+F ++ H + ++ + N+ + Sbjct: 32 YSEHKHTAFEISCILSGSGLYKTQNALYHFHAGDIFLYSTNEIHYIIEIFDNCDILNLHF 91 Query: 90 CPERLKLN----LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 P + D + FN + A+ RQ++ ++E E ++ +P Sbjct: 92 EPRFIWSPGNDLFDSKYLNIFFNHGDSFENCLEQDEDTARIRQLLLEIEKEFNEKLPDYE 151 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSET-----LLDKLITRLAASLKSPFALDKFCD 200 M ++ +++ L R+ S S LDK + + ++ S L+ Sbjct: 152 LMVKVKVLTILVTLGRNFNFSIPQKALSQSRSQHLLQLDKALAYIDDNISSDIDLNTIAK 211 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 A S F++ G+T +Y+ RV A + L + I DI+ +CGF ++ F+ Sbjct: 212 TAHMSRSYFSTIFKEMNGLTPWEYIINKRVELAAHYLTSTDFSILDIACKCGFNNTANFN 271 Query: 261 VVFTRETGMTPSQWRHL 277 F + T +PS +R Sbjct: 272 HAFKKVTRKSPSDFRKS 288 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 111/290 (38%), Gaps = 16/290 (5%) Query: 4 QLKLLKDDF----FASDQQAV----AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLND 55 ++ LL D+ + + ++ YP A H H E +++ G + +N Sbjct: 3 KMTLLNDNSEVVSYNFADFPIRAKKSLLSDYPTMAAANHWHTDWEFILLLNGKMSYSVNG 62 Query: 56 RPYRITRGDLFYIHADDKHSYASVN--DLVLQNIIYCPERLKLN-LDWQGAIPGFNASAG 112 + Y + G +I+++ H S + D I++ P + + I Sbjct: 63 KSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPPSLISSITRIKETYILPVCEDTS 122 Query: 113 QPHWRLGSM--GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP 170 P + L +++ + ++ LF + L + S S+ Sbjct: 123 NPFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSISIQ 182 Query: 171 PTSSETLLDKLIT---RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 T+ + L+ + + + + L++ + F+ T YL + Sbjct: 183 ETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYLTE 242 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 R+ + LL+ S L +++I+ +CGF S+YF+ +F + G TPSQ+R Sbjct: 243 YRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHKTLGCTPSQYRRK 292 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 10/255 (3%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNII 88 H HD EL+ + +G G ++ + Y +T L I HS + +NII Sbjct: 36 VPLHWHDDMELIYIKKGCGHISVDFKEYHVTAPSLVLILPGQLHSIDQYMDESMEYENII 95 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGS------MGMAQARQVIGQLEHESSQHVP 142 + L L + F + + + I + Sbjct: 96 FSLSML-LPGKYDYTKEDFLTPLLAGRFTVPTVFTPVYPYYEDVVAPIDACDEICKTMPQ 154 Query: 143 FANEMAELLFGQLVMLL-NRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDE 201 + + +L NR R + L + + ++ + + ++ D Sbjct: 155 GYQLYIKSKLYEFFFVLDNRCRNLTKPLKSKKTLDKMKVVLKYVENNYADKISIADIADV 214 Query: 202 ASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSV 261 A SE + F++ G + YL+ R+ A LLQ S + IS E GFE +YF+ Sbjct: 215 AGFSESHFMRYFKETMGTSFVDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNR 274 Query: 262 VFTRETGMTPSQWRH 276 F + GMTP Q+R Sbjct: 275 AFKKHYGMTPLQYRK 289 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 103/283 (36%), Gaps = 19/283 (6%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + FF DQ+ P H HD EL V G G + D GD+ Sbjct: 12 EAENHSFFFIDQRT------EPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDV 65 Query: 66 FYIHADDKHSYA-----SVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPH--W 116 I H + + D ++ ++ + ++ +++ + A P Sbjct: 66 ALIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDAL 125 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET 176 + G + R+ + ++ + A ++ + H + + + Sbjct: 126 KFGPESVRVIRKTLSEM----NGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVR 181 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 + ++ + ALD E + F++ GMT +Q++ Q R+ A L Sbjct: 182 RMQQICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDL 241 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 L+HS+ +S+I GF D +F VFT GM PS++R Sbjct: 242 LKHSQKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 92/274 (33%), Gaps = 10/274 (3%) Query: 14 ASDQQAVAVAD----RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 Q + V Q +F H H+ E++ G + GD+ I+ Sbjct: 12 PDPQFPIKVHRCEFDGRGQVLFNHHWHEHLEILYFVSGEATLECGSTTFTAKEGDMIVIN 71 Query: 70 ADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQ 128 ++ H S +D + + L+ + + + A A Sbjct: 72 RNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFITPITQNRLIFENRISGADALA 131 Query: 129 VIGQLEHESSQHVPFANEMAEL-----LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLIT 183 + + E + + L L + + + + + Sbjct: 132 PMLSIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFK 191 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 + + ++++ A S + F++ +G T+ +Y+ + R+ A YLL+ S L Sbjct: 192 YIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLT 251 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +S+I+ GF D YFS F + M PS R Sbjct: 252 VSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 99/282 (35%), Gaps = 6/282 (2%) Query: 2 AHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 ++Q DF + H HD + V +G +ND+ + + Sbjct: 16 SNQELTNHGDFTFPLAVYKNTLSKNLLGYVIWHWHDEYQFSYVTQGEIYFYINDQTFILK 75 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP---HWRL 118 G +I+ HS +VND + ++ + I + L Sbjct: 76 EGQGIFINTGCMHSIKAVNDPESTYVCINIDKKLFSSFKGSVIEQKYLNTLTQSAIFLDL 135 Query: 119 GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS---DSLPPTSSE 175 + + + + Q + L+ ++ ++ Sbjct: 136 SEEWHIECINKLKDIYQFYVDKSFSFEIDICINLMQTLALVVKNALNPILLTTIESKDEY 195 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 + K+++ L L++ ++ + F+++T MTI +YL + R+ + Sbjct: 196 QKIKKILSFLHQHYAEKITLEQIAQHIFLNKNECCRLFKRKTKMTIFEYLLEHRLNKSIE 255 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LL HS IS I+ + GF +Y+ F + G+TP+++R Sbjct: 256 LLIHSDKSISQIAIDTGFSTVSYYIDTFHKNVGITPNEYRKR 297 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 99/283 (34%), Gaps = 7/283 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M +L + + + + + F H H E++ + + D + Sbjct: 1 MIEKLNGTTETVNFTLASNIRLYHNNSAEDFPLHWHVPGEIICPIQNTYNVTVADEILYL 60 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS 120 D+ +I + + HS + + + + + ++ Sbjct: 61 KPHDILFIGSGELHSITAPKEGERYILNFSTAMFE-QFHELALFFAALHPFRLLRYQDQP 119 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS------DSLPPTSS 174 Q ++ ++E E F + L ++ R + + L Sbjct: 120 QFNDQLLALMTRMEKEYFGAAVFRDCELSSLMLHFFAVIGRKLHQNAPHENISPLRQKEQ 179 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + L + A +LD+ +EA S+ + F++ TG T + YL R+ A+ Sbjct: 180 QERFSMLCNYINAHCTEDLSLDELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLFAK 239 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 LL L I++++ GF F+ +F + G TPS++R L Sbjct: 240 TLLADFSLPITEVAMRSGFNSLATFNRIFKFQIGCTPSEFRKL 282 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 97/273 (35%), Gaps = 8/273 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + + H H+ E+++ + + + Y I ++ I + + Sbjct: 34 FQKDSTIRIWYNEQNQNYDTHWHNAIEIILPVENHYDVEASGQAYHILPSEILIIPSGEM 93 Query: 74 HSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQL 133 H+ + ++ + + I S Q++ Q+ Sbjct: 94 HALYAPESGKRFIFLFDVSSIAQMKGYTS-IQSLMTSCLHITKTTYPQIYNDVYQLLVQM 152 Query: 134 EHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-------DSLPPTSSETLLDKLITRLA 186 +E F L + + R+R + S ++++ + Sbjct: 153 RNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKEYLQKFNEVLDYID 212 Query: 187 ASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD 246 + LD D + S+ + F+Q T T YL R+ A+ LL + L I++ Sbjct: 213 SHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAEELLANPELSITE 272 Query: 247 ISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 I+ + GF + F+ +F ++ G TPS++R L S Sbjct: 273 IALQSGFSSISTFNRIFKQKKGCTPSEYRSLYS 305 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 108/288 (37%), Gaps = 14/288 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVA----DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDR 56 M ++ L + D + + D+ ++ H H+ E + V +G + ++D Sbjct: 1 MDKEM-LKEKVMHGDDNFPIGIHKTDIDKGRDNILYLHWHEGFEYLTVTKGRAVFKVDDL 59 Query: 57 PYRITRGDLFYIHADDKHSYAS--VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP 114 +++G+ +I+++ HS S + ++ P L ++ N Sbjct: 60 EIEVSKGEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHS 119 Query: 115 -----HWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH--RYTSD 167 H + ++ Q+ + + + + ++ ++ + + Sbjct: 120 LYFPIHLKKDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNAKKSINK 179 Query: 168 SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 + + ++ + + + + +F S+ + F+ T T+ Y+ + Sbjct: 180 GSNTSYKTERMKVVLNYIHENYFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNR 239 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 R+ + L + IS+I+ + GF D +YF+ VF + G TP +R Sbjct: 240 YRIERSCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 97/274 (35%), Gaps = 9/274 (3%) Query: 8 LKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFY 67 + FF + +A YP V H HD EL ++ +G+ + ++ Y GD+ + Sbjct: 17 HGEVFFPVQKYITRLAADYP--VITTHWHDEAELTLITKGSCTYQIDLLEYEAKEGDIIF 74 Query: 68 IHADDKHSYASVNDLVLQN--IIYCPERLKLN----LDWQGAIPGFNASAGQPHWRLG-S 120 I HS + + + ++ L N + P N P+ Sbjct: 75 IPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYLTPLINHEFAMPYLIAPKH 134 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + + ++ + S+ + Q + LL ++ + +S L Sbjct: 135 PAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQYSEKNADFGVNTSSDKLKN 194 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 ++ + + + SE + F++ MT QY+ VR+ + + Sbjct: 195 VLDYIDVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCVQYINNVRLEKSVEQFERG 254 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 I D+S GF + +YF F + MTP + Sbjct: 255 NTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSF 288 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 95/270 (35%), Gaps = 5/270 (1%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F P H H ELV V GNG + T+GDL I ++ Sbjct: 17 FGQSFTYQKFDALKPNKNLVWHYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNL 76 Query: 73 KHSYASV---NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQAR 127 H + + + + L + + + + Sbjct: 77 PHCGFTDACTGNTSESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIG 136 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 + I LE++S A G + + ++ + + Sbjct: 137 EKIEILEYKSDFQRLLAILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKE 196 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + + P +L++ D + + F++ T T Q++ + R+ HA LL + + I++I Sbjct: 197 NYREPISLEEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEI 256 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHL 277 E GF + ++F+ F TGM+PS++R+ Sbjct: 257 CFESGFNNFSHFNKSFKAFTGMSPSEYRNQ 286 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 12/263 (4%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 +++ HTH F EL V G G + + + I GDL I +H+ SV Sbjct: 23 ISLVKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSV 82 Query: 80 NDLVLQNIIYCPERLKLNLDW-QGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 L+ + +++ + Q I F + + Q+ +E Sbjct: 83 KGKSLEYYVIGIDKISFLAENGQTGIQAFCNFR----------DQSSVSDIFAQMLYEMR 132 Query: 139 QHVPFANEMAELLFGQLVMLLN-RHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDK 197 + + + L L++ + R S+ ++ L + LD Sbjct: 133 NDDYGSEIICQNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDT 192 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 ++ + F + G++ QYL + R+ A LL+ + +SDI++ GF + Sbjct: 193 LTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQS 252 Query: 258 YFSVVFTRETGMTPSQWRHLNSQ 280 YF+ F + GMTP Q+R N++ Sbjct: 253 YFTQSFRKYYGMTPLQYRQQNAE 275 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 10/257 (3%) Query: 31 FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND--LVLQNII 88 H HD E VIV G L + Y + +G+ +I+A H+ S N L +I Sbjct: 39 VPWHWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSIT 98 Query: 89 YCPERLKLNLD---WQGAIPGFNASAGQPHWRLGS--MGMAQARQVIGQLEHESSQHVPF 143 + P + ++D W + + H L S +A I + + Sbjct: 99 FHPRLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFG 158 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPT---SSETLLDKLITRLAASLKSPFALDKFCD 200 QL++ L+ + P + L ++ + + D Sbjct: 159 YEFQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIAD 218 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 A SE + FR G+ QYL+Q R+ A L + I+ I +CGF+D++YF Sbjct: 219 TAMISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFV 278 Query: 261 VVFTRETGMTPSQWRHL 277 F + TPS++R Sbjct: 279 KTFREQKKCTPSEYRKN 295 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 109/268 (40%), Gaps = 8/268 (2%) Query: 22 VADRY--PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 RY H HD E++ V +G ++ + + G +F H ++ Sbjct: 21 YHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAP 80 Query: 80 N-DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS----MGMAQARQVIGQLE 134 + + I+ E + F + + ++ +L Sbjct: 81 DTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIPILDELV 140 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFA 194 E+ + + Q++ LL + + L +S L +++ + + Sbjct: 141 EENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEE-LTRNASGELEKEILLYIQDNYHDNIG 199 Query: 195 LDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFE 254 L + + SE+ + + F ++ MT+ QY+ VR+ +A++LL+ + L +++I+ + G++ Sbjct: 200 LAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQ 259 Query: 255 DSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + +YF F+ G +P ++R+ +++D Sbjct: 260 NVSYFIRRFSSAMGESPLRYRNGKARRD 287 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 12/262 (4%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + + HTH F EL V G G ++ + + I + +L I+ +H+ S Sbjct: 7 YSSYSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIRHTEVS 66 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 + L+ I+ E L + + + E Sbjct: 67 DKNSPLEYIVLGVEGLNFLIYNDKEYLNIQCEDFSENLDF----------YFHTILREMD 116 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE--TLLDKLITRLAASLKSPFALD 196 + + + L L++ L+RH + + P+S + + ++ + LD Sbjct: 117 EQKESYETICQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLD 176 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + ++ F + G+ YL Q R+ +Q LL + L + I+ +CGF S Sbjct: 177 TLAELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSS 236 Query: 257 NYFSVVFTRETGMTPSQWRHLN 278 +YFS F + GMTP+ +R Sbjct: 237 SYFSQCFRKICGMTPTAYRKQF 258 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 106/260 (40%), Gaps = 10/260 (3%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS--VNDLVLQNI 87 + H H+ E++ V G+ L++ + + GD +I+++ H + + +L ++ Sbjct: 41 DISWHWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSL 100 Query: 88 IYCPERLKL---NLDWQGAIPGFNASAGQPHWRL--GSMGMAQARQVIGQLEHESSQHVP 142 ++ + ++ Q + + + +A I + + Sbjct: 101 VFNKNLISGGVQSVFEQNFVNPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEF 160 Query: 143 FANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRLAASLKSPFALDKFC 199 + + ++ ++ + ++ + +++ + + L+ Sbjct: 161 GYEILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIA 220 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 + SER + F+ G++ QY+ + RV A +L+ ++ I+ IS GF+ +YF Sbjct: 221 KVVNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYF 280 Query: 260 SVVFTRETGMTPSQWRHLNS 279 S +F R G+TP+Q+R+ + Sbjct: 281 SKIFKRFIGITPTQYRNKSK 300 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 93/284 (32%), Gaps = 16/284 (5%) Query: 5 LKLLKDDFFASDQQAV---AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRIT 61 + + +D R ++H H EL +V G +N R Y + Sbjct: 1 MDFRYETVIPNDDLPFRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLK 60 Query: 62 RGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSM 121 D ++ ++ HS + + + + + + + I + Sbjct: 61 PNDFVIVNPNEIHSIECPDPNITIVLQIPMKSFEGYMSDESRITFADK---------DES 111 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD----SLPPTSSETL 177 A+ ++ + + + F + + L+ + Sbjct: 112 QKARLVALVTAMYRTYEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDK 171 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 L ++ + + +L+ + L FR+ YL +RV +A L Sbjct: 172 LSQVTQYMKENYDKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMREL 231 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 +S + DI+ + GF D+ F+ F + G PSQ+R +QK Sbjct: 232 LNSDRYVGDIALDHGFADARAFAKAFKKRYGCLPSQYRKQMNQK 275 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 23/292 (7%) Query: 6 KLLKDDFFASD---QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITR 62 + L +F SD + +R PQ H HDF ELV V RG+ +V++ R + + Sbjct: 77 RFLSRNFRPSDILINAHIPFFNRSPQ----PHKHDFFELVYVVRGSMKNVVDGRRILLEQ 132 Query: 63 GDLFYIHADDKHSYASVNDLVL-QNIIYCPERLK----------LNLDWQGAIPGFNASA 111 GD ++ + H + L N + E ++ Sbjct: 133 GDFCLMNPNAVHQVETDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKN 192 Query: 112 GQPHWRLGSMGMAQ--ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 Q + + + + Q + Q+ E ++ + E L + R Sbjct: 193 KQNYLVFSARHLEEPIISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEF 252 Query: 170 PPTSSET--LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 + K+I+ L+ + ++ L + + + L ++ G + ++ ++Q Sbjct: 253 ESLQDLPGGNISKIISYLSENYRTA-TLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQ 311 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 R+ HA LL+ + L ISD++ E G+ + YF VF ++ GM+P+ +RH N Sbjct: 312 FRLAHACELLKQTELPISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQNQ 363 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 96/273 (35%), Gaps = 5/273 (1%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 +SD + + + + H H E+ +V G ++ D + DL + Sbjct: 11 ISSDDLFIVLNHPNAKFDYPVHYHSDYEINLVMNTYGERIVGDSVEKFDNLDLVMTGPNL 70 Query: 73 KHSY--ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--GQPHWRLGSMGMAQARQ 128 H++ V + I + + L + + Q M ++ Sbjct: 71 PHAWKGEIVEGNHVVTIQFSDKLLNFPILEKRLFSPIKQLLLDSQKGISFSENTMLAMKE 130 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQ-LVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 I QL H +L + Y + TS + K+ + Sbjct: 131 KILQLTRMQGFHTVLEFLSILYDLSTADRHILVSNLYDTKDTIRTSKSRRIAKVCDYIEK 190 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + + P L + SE FR++T T Y+ +RV A +L + +++I Sbjct: 191 NFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEI 250 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 CGF + + F +F ++ G TPS++R + Q Sbjct: 251 CYSCGFNNLSNFIRIFKKKKGNTPSEYRTILQQ 283 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 95/278 (34%), Gaps = 19/278 (6%) Query: 15 SDQQAVAVADR----YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 ++ +A + + F H H E++ V +G V+N +I + I Sbjct: 19 TEDFPLAYYPNLVSVWREFFFVPHWHKEIEILCVHQGQLELVVNGFSRKIKANTIVLIPP 78 Query: 71 DDKHSYA--SVNDLVLQNIIYCPERLKLN----LDWQGAIPGFNASAGQPHWRLGSMGMA 124 + H+ + I++ + + + Q P + Sbjct: 79 NTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLIQEGVTSYVDFPDKSQQ 138 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK---- 180 + + + + + QL+ L P S L + Sbjct: 139 SLT-LFQLFDQCFMGKSSYRELRLKGIVIQLLSHL---LEVGTDQPAKKSSERLQEKREK 194 Query: 181 -LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 +++ + ++ L D S S+ + F+Q + YL R+ + LL+ Sbjct: 195 IVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNHYRLIRSAELLRE 254 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + L + I+ GF +SN+FSV F + G TP+Q+R Sbjct: 255 TDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_UPI000197C3AF transcriptional activator RhaS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3AF Length = 269 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 135/272 (49%), Gaps = 6/272 (2%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +KL +DFF + QQ + V R PQ +F EHTHDF E+ +V +G GLHVLN RPY + G Sbjct: 1 MKLYSEDFFITPQQHITVEPRVPQPIFPEHTHDFSEIFLVTQGIGLHVLNGRPYTLCPGM 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 + YI + D H + +V++L L N++Y + L+ +A HW L Sbjct: 61 VCYIKSCDYHLFDNVSNLNLTNVLYRSDSSFTYLNNISHFFPTDAERNISHWLLNKEHYN 120 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITR 184 +A+Q+I +L +ES E LF QL++ L RY + ++E + +++ Sbjct: 121 KAQQIIDKL-NESDGSDLAY---TESLFLQLIVNLQDGRYN--HIGEGNNEQRIIQMLRW 174 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 L + + S S R + + G++ YL ++R+ A Y ++ S I Sbjct: 175 LNMNFIEDVDWGHLTTQFSVSLRTFHRYMKNNLGISPQNYLIKLRLSEAYYQIRFSDKTI 234 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 +DI+ E GF DS YFS F E TP RH Sbjct: 235 TDIALESGFNDSAYFSTCFKSEYNFTPRDLRH 266 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 101/268 (37%), Gaps = 6/268 (2%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + V + + + + H H EL +V +G ++ D DL + Sbjct: 12 TDEDLFVLLNNPKAKFDYPIHFHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLLGPGLP 71 Query: 74 HSYASV--NDLVLQNIIYCPERLKLNLDWQGAIPGFNASA--GQPHWRLGSMGMAQARQV 129 H + + ++ + I + + L + + ++ Sbjct: 72 HKWKAPTLDETQVITIQFHEQMYNSFLLNKRVFEPIRELLIRSTRGIVYTGKTFERVKER 131 Query: 130 IGQLEHE--SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 + L + + + F + + +L LL Y S L S ++K+ + Sbjct: 132 LLNLSNARGFNTALEFYSILYDLSIADEQRLLTSASYDSSLLVRESRSRRIEKICKYIEV 191 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + K L + + + SE + F+++T + YL VR+ +A LL + ++DI Sbjct: 192 NFKKDITLKEIAELVNMSESAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQSVADI 251 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWR 275 + ECGF + + F+ +F + TP+ +R Sbjct: 252 AFECGFSNLSNFNRIFKKYKNQTPTDYR 279 >UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRP4_9SPHI Length = 290 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 106/291 (36%), Gaps = 16/291 (5%) Query: 5 LKLLKDDFFASDQQAVAVAD-RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +K L + S+Q ++ V + P H H EL + + +G + D G Sbjct: 1 MKALFEKLVFSEQSSLLVRRFQIPYFDAPWHYHPEYELTYIVKSHGRRFVGDHVDSFQAG 60 Query: 64 DLFYIHADDKHSYASVNDL---------VLQNIIYCPERLKLNLDWQGAIPGFNASAGQP 114 DL + D H + + +D V + + + L + Sbjct: 61 DLVLLGPDLPHFWRNDDDYYQAGSVQKAVSIVVQFPATFPERGLATVPEAESVRKLLERS 120 Query: 115 HW--RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFG--QLVMLLNRHRYTSDSLP 170 + R +++ QL ++ Q LL Y P Sbjct: 121 RYGLRFSQAMSQSVSELLEQLPQQTGLPQLLGLLTILNELATDQEAYLLASDGYQL--AP 178 Query: 171 PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 + + +++ + + ++ A + + F+ +T T +YL ++R+ Sbjct: 179 GAAETERMKRVLEFVLLHFREEIRIESIASIAGMAPAAFCRYFKNRTRKTFVEYLNELRI 238 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 HA+ LL + L IS +S +CG+ +S++F F T +TP Q++ L K Sbjct: 239 GHARKLLTTTDLSISQVSLDCGYNNSSHFHRQFKLYTSITPFQYQALAKGK 289 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 95/270 (35%), Gaps = 9/270 (3%) Query: 15 SDQQAVA-VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 S +A A+ A H H+ E ++ G +N + G +I++ Sbjct: 37 SPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTGQGVFINSGAL 96 Query: 74 HSYASVNDL-VLQNIIYCPERLKL--NLDWQGAIPGFNASAGQPHWRLGS--MGMAQARQ 128 H+ +L + ++ P + + WQ I P + L Q Sbjct: 97 HAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDEAVPWQRQVLL 156 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRL 185 + + + + LL + + + +++ + Sbjct: 157 CLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIASERMKQMLRYV 216 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 ++K + SE + FRQ G+T QY++Q RV A LL+ +RL Sbjct: 217 EEHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVEKAAELLRSTRLKTG 276 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWR 275 ++ ECGF D++YF F TP ++R Sbjct: 277 EVGLECGFSDASYFIKTFREIKHCTPREYR 306 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 103/282 (36%), Gaps = 15/282 (5%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F D + P + H H E++ + G G + D GD+ I Sbjct: 10 FPIDSHIHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEGDVCMIGPQL 69 Query: 73 KHSYASVN---------DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 H + + + + + + NL + + + +G Sbjct: 70 PHEWRNDPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERSRRGIKFVGK 129 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD----SLPPTSSETLLD 179 + R+ I +L +S+ + + + +L+ + + + + Sbjct: 130 S--RKKIAELISQSANETGASRVIKLIALLELMATSEEYEILASTGFTETVNSDDFERFN 187 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 K+ L + SP L++ + + F+++T T +YL +R+ HA+ LL Sbjct: 188 KVYKYLVKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGHAKKLLIE 247 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 L IS IS+E GF + + F F + T M PS+++ ++ Sbjct: 248 GNLKISTISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKER 289 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 106/281 (37%), Gaps = 12/281 (4%) Query: 12 FFASDQQAVAVA----DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFY 67 + + + + YP H H+ EL+ V G + +NDR + D Sbjct: 15 HYDNPGVPLYIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRINDRDILLKEKDCLV 74 Query: 68 IHADDKHSYASV--NDLVLQNIIYCPERLKLNLD-WQGAIPGFNASAGQPHWRL--GSMG 122 +++ H + + I++ P L + +Q + F + ++ S Sbjct: 75 VNSRQLHYGYAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIENKNIAYFHYAADSAN 134 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLD 179 Q + ++ ++ ++ A L +L + S TL Sbjct: 135 HEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLEQEPAYDYSDLTLQK 194 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 K+++ + + LD + S F++ + + + R+ ++YLL + Sbjct: 195 KMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYRLEVSRYLLAN 254 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 +R I+ I+ CGF +YFS +F RE G TP+++R Q Sbjct: 255 TRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRKAAHQ 295 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 95/258 (36%), Gaps = 7/258 (2%) Query: 30 VFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS-VNDLVLQNII 88 F H H+ ++ G +++ G++ ++++ H S ++L +I Sbjct: 30 NFKRHWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDNLKFYSIR 89 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLG-SMGMAQARQVIGQLEHESSQHVPFANEM 147 P L N A + + I + E Sbjct: 90 IEPTFLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVGYELS 149 Query: 148 AELLFGQLVMLLNRH-----RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 + QL++LL R + + S + + + L + Sbjct: 150 IKANIYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRV 209 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 + S + F+Q TG T ++ +R+ A Y L+ + L +++I+ CGF+ NYFS + Sbjct: 210 NLSAHHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRL 269 Query: 263 FTRETGMTPSQWRHLNSQ 280 F R ++P+++R+ + + Sbjct: 270 FKRNYNISPTKYRNEHRE 287 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 105/282 (37%), Gaps = 7/282 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVA--DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPY 58 M + +D + ++ + H H E+ + RG+G +++N Y Sbjct: 1 MKPIPTVTRDLIELPPAFPIVISQSEGVSPLFQRLHWHTALEINYISRGSGYYLINGTRY 60 Query: 59 RITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL 118 GD+ I+++D H LV+ I++ P L + + G + Sbjct: 61 DFREGDILLINSNDLHRAFENEGLVMTIIMFDPAYFALEQRYDTELLIPFREIGMRFDNM 120 Query: 119 GSMGMAQARQV---IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 G ++ I ++ E + P + Q + +NR+ + Sbjct: 121 LDRGHPILPRLGAAIEEMRCEFAGREPHYEAVIRSQLVQFMAFVNRYFAKEQERRSSRIR 180 Query: 176 --TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 ++ + + A + P+ L + A S F Q G + YL Q+R+ A Sbjct: 181 GMEIVRLTLNTIEADIAYPWTLKELAAAAHLSPSRFSALFVQTVGTSPMDYLIQLRLSAA 240 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 LL+ S I +++ GF + + F+ +F + G PS+ R Sbjct: 241 VSLLESSDKKIIEVAESAGFRNLSNFNRLFKQHIGKQPSELR 282 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 91/266 (34%), Gaps = 9/266 (3%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVND 81 A+ A H H+ E ++ +G +N + ++++ H+ Sbjct: 66 YAENLKSYSVAWHWHEEFEYILAMKGPLTVDVNKTRVTLQTNQGVFLNSGILHAVEQAEK 125 Query: 82 LV--LQNIIYCPERLKL--NLDWQGAIPGFNASAGQPHWRLGS--MGMAQARQVIGQLEH 135 L + ++ P + + WQ I + L AQ + + Sbjct: 126 GEALLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFFLLDEAVPWQAQVLACLREAWQ 185 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRLAASLKSP 192 + + LL+ + + + +++ + Sbjct: 186 AVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIAAERMKQMLRFVEEHYAEE 245 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 +++ + SE + FRQ G+T QY++Q RV A LL+ +RL +I ECG Sbjct: 246 LTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAAELLRSTRLKTGEIGMECG 305 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLN 278 F D +YF F TP ++R Sbjct: 306 FADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 90/269 (33%), Gaps = 7/269 (2%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 + V +PQ H H E++ + G L Y + + D+ +I H Sbjct: 18 PIEYHYVDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHG 77 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 S D + I++ L+ A Q + + Sbjct: 78 -GSPKDCTYECIVFDFNILRQRSFLTDTF--LRKIAHQKISIYPVHNKTCITSPLITMFD 134 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRH-RYTSDSLPPTSSETLLDKL---ITRLAASLKS 191 L ++ Y+ + S+ +++L + + Sbjct: 135 AIRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAK 194 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 P L + E S + + F++ T T YL R+ A Y + S ++DI+ C Sbjct: 195 PLTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRC 254 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 GF D +YF F + G+TP +++ + + Sbjct: 255 GFNDFSYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 86/269 (31%), Gaps = 23/269 (8%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 + H H+ E++ +G +N Y I I + D H S D + Sbjct: 38 FLAKHHWHEELEIIYFEQGCFHLEINMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAFV 97 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQ--------- 139 + L+ + L + Q L+ E Q Sbjct: 98 FSLSMLR-AFAADPVQEKLVQPLAEGSLSLPGLIYRQ-NPCFVILKREFLQIADAAGLPS 155 Query: 140 ------------HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAA 187 +P L ++ +P + K ++ + Sbjct: 156 GASNLRSQYRVSSLPQYMRAKASLLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQE 215 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 + + + +A+ +E+ + F++ G YL ++R+ +A LL+ + +++I Sbjct: 216 HMTEKVTMQELAAQANMNEQYFCRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEI 275 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRH 276 + E GF + F F G TP Q+R Sbjct: 276 ALESGFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 9/260 (3%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVL 84 RY F H H E ++ G ++ DR Y + +GD +I+ + H L Sbjct: 39 RYYNRYFRCHWHPEIEFSVITEGECIYEAGDRVYELKKGDGIFINQNVLHMAEMKGKLEC 98 Query: 85 QNIIYCPERLKLNLDWQGAI------PGFNASAGQPHWRLGS-MGMAQARQVIGQLEHES 137 + + E L + I P N G + + + +L Sbjct: 99 RFGVVRAEAFFLGGSTESLIYRKFMEPVINNPEISCVPFYGDIPWQKRLMRQLAELIRIY 158 Query: 138 SQHVPFANEMAELLFGQLVMLLNRHRYTS--DSLPPTSSETLLDKLITRLAASLKSPFAL 195 + M F L + + +++ + K I+ + + L Sbjct: 159 EERPEGFELMMTSGFSLLWLEFVKALGEEKGNAVSINKDAERIRKGISYIQRNYTKKITL 218 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 + + + FR + +Y+ R+ + L++ +++I+ + GF Sbjct: 219 KDIAEICQSCQSECCRMFRNVVKESPIEYVNTYRIRRSLILIEEGTYSMTEIAQKTGFSG 278 Query: 256 SNYFSVVFTRETGMTPSQWR 275 S+YF+ VF ++ G TPS+++ Sbjct: 279 SSYFTEVFKKKMGCTPSKYK 298 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 99/283 (34%), Gaps = 19/283 (6%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 ++ FF DQ+ H HD EL V G G + D GD+ Sbjct: 12 EVENHSFFFIDQRV------TTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDV 65 Query: 66 FYIHADDKHSYA-----SVNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPH--W 116 I H + + +D ++ ++ + ++ + + P Sbjct: 66 ALIPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNAL 125 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET 176 + G+ R+++ Q+ + + + H + + Sbjct: 126 KFGTGSSQTIRRILSQM----NDMDELGRLCEMFRLLPAIFTSSDHTFAGKPMNIERDVR 181 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 + ++ + +LD E + F++ GMT +QY+ Q R+ A L Sbjct: 182 RMQQICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACEL 241 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 L+HS+ +S+I GF D +F VF GM+PS++R Sbjct: 242 LKHSQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 92/256 (35%), Gaps = 7/256 (2%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNII 88 + + H H E+++ G + D + D+ +I + KH + + + Sbjct: 29 EDYPIHWHTPMEIIMPLEGGYTVQIGDDLVHLNENDIIFIASGVKHRLIAPDTGKRLILQ 88 Query: 89 YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMA 148 + + +I A A + R+++ + +E + + Sbjct: 89 IEWSAV-SKIKELNSILTLIAPAITLTPETSGDIHSNIRKLLLDISNEYQTDSFLSEAVI 147 Query: 149 ELLFGQLVMLLNRHRYTSD------SLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 202 ++++L+ RH S + + LD+ A Sbjct: 148 YSKILEVLVLIGRHHTASSCHFNVGRHKQQEYLERFLSICEYIDTHCTEDITLDEIAKIA 207 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S+ + F+Q T T +YL Q R+ A LL + +++ + + GF + + F V Sbjct: 208 GFSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLLADPNISVTETAMQSGFANPSTFIRV 267 Query: 263 FTRETGMTPSQWRHLN 278 F E G TP+++R + Sbjct: 268 FKTEKGCTPTEFRKMF 283 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 102/275 (37%), Gaps = 16/275 (5%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + + ++ H HDF E ++ G G ++ + Y + GD ++ Sbjct: 13 LNPEFLFTCVSTRTEEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTY 72 Query: 74 HSY---ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI 130 H S L I + K G P F + ++ Q+ Sbjct: 73 HRSKAGYSKEGLKECYIAFSGVSFKGCKS--GYFPSFKGNGK--IIKMADRMKKNIFQIC 128 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL--------PPTSSETLLDKLI 182 + E+ + M + Q++ L+ R + T + ++ +++ Sbjct: 129 TVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIM 188 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL-QHSR 241 + + + +L++ S + + F+ +TG T YL ++R+ A+ +L Sbjct: 189 KYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPE 248 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 I +++ G+ D+ +FS +F + G++P ++ Sbjct: 249 EPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 91/264 (34%), Gaps = 8/264 (3%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLV 83 Y H HD E + + G + +N + + GD ++A H + D Sbjct: 35 YYNMCAPCHWHDDIEWIYIITGKMRYYVNGKRLILNEGDSLMVNARQMHYGYAFEQQDCY 94 Query: 84 LQNIIYCPERLKLN--LDWQGAIPGF-NASAGQPHWRLGSMGMAQARQVIGQLEHESSQH 140 I++ P N L + +P F N S H+ + + + ++ Sbjct: 95 FLCILFHPSLFGNNQILQEKYFLPFFENTSLEFHHFYSNDEAGVKVGRYLQEVLLLKEDS 154 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLL---DKLITRLAASLKSPFALDK 197 +L L R S + + SE L +++ + +L Sbjct: 155 DSGYELGVISCMLELWSFLIRTDLLSAAKNKSESEQELNIQKDMVSFIYQHYPEKISLTD 214 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 Q F+ + +L R+ + LL ++ I++I+ CGF + Sbjct: 215 IAAAGHVGRSKCCQIFKHYMQQSPVDFLNTYRLKISCRLLCTTQKSITEIAILCGFNHLS 274 Query: 258 YFSVVFTRETGMTPSQWRHLNSQK 281 YFS F G TP ++R L+ + Sbjct: 275 YFSKYFMECYGCTPREYRTLHEHE 298 >UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KRM0_CLOPH Length = 296 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 100/271 (36%), Gaps = 8/271 (2%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 + + + + + H H E+++ V+N+ + + GD+ + + + H Sbjct: 15 DENIGIRLYLNEEYEDYPIHWHTAAEIIMPIENTYEVVVNNIRHELEVGDIILLPSGELH 74 Query: 75 SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLE 134 + + L + F+ + + ++ ++ Sbjct: 75 QLYAPTKGKRIIFQFDYSLLYNLTGFDSVFHMFHPCTLITNETMPD-IHDNLHSLMLRIM 133 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS----ETLLDK---LITRLAA 187 E P + ++L R+ TS+ P + +DK + T + Sbjct: 134 DEYFGDSPLKEAAIYSMLVNFFVILGRNYITSEKKFPNTKSPKRHEYIDKFLMVCTHINE 193 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 P +D A S+ + F++ +G++ YL + R+ HA+ LL L I++I Sbjct: 194 HCTEPINVDDLAQLAGFSKYHFMRLFKEFSGISYYDYLNKQRIMHAEKLLIDPNLTITEI 253 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 + GF F+ +F + TPS+++ L+ Sbjct: 254 AMHSGFNSLATFNRIFKEQKQCTPSEYKRLH 284 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 3/266 (1%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F + + + H H F E+ + GNG L D + DL I+ + Sbjct: 16 FNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLIIINPNC 75 Query: 73 KHSYASV-NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIG 131 H+ S N L+ I+ + +N + + H + + Sbjct: 76 LHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSIILNQLN 135 Query: 132 QLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLD--KLITRLAASL 189 + E + + ++ + R + L L+ K+ L + Sbjct: 136 LIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLDSHY 195 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 L+ + + ++ L F +Q GM+ YL + R+ A+ LL+ + I DI + Sbjct: 196 SENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKDIGS 255 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWR 275 GF +S+YFS +F ++T ++P Q++ Sbjct: 256 IVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 12/265 (4%) Query: 15 SDQQAVAVADRYPQDVFAEHT-----HDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 +D +++ + + HT D + +V G G++ + + + GDLF Sbjct: 14 TDNVELSIFNCGHEYCVPGHTWGPGVRDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAK 73 Query: 70 ADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 + +YA+ + + F+ H + + Sbjct: 74 PNQLITYAADETDPWEYYWVGFN--GACANKLVQQTPFSDLHPVHHCKDPQAVREALYNI 131 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASL 189 + S P + + L + + +SS + I + + Sbjct: 132 -----YLSRGPEPQCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNY 186 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 ++D S L + F G + YL R+ A LL++S L I++I+ Sbjct: 187 SHDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAV 246 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQW 274 GF D YFS VF + G+ PS++ Sbjct: 247 SVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 112/281 (39%), Gaps = 13/281 (4%) Query: 15 SDQQAVAVAD----RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 SD+ + V+ Y F H H E+ +V G L+ +N Y + GD+ +A Sbjct: 18 SDEFPLLVSYEKLSGYKSGSFLWHWHPEIEITLVLDGQILYKVNQCTYHMKAGDILLGNA 77 Query: 71 DDKHS--YASVNDLVLQNIIYCPERLKLNLDW---QGAIPGFNASAGQP--HWRLGSMGM 123 + H+ + D +I + P+ + + + + F + P + Sbjct: 78 NVLHAGFMEDMKDGKYVSITFLPKIIYGSYGSILRRKYVEPFLHNFSLPAVYIDYSQPWH 137 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS--ETLLDKL 181 + + ++ + F +L + ++ + S + ++ Sbjct: 138 EVFSEYVREIITLYEEKKEFYELDITGTLQKLWRCMLQNLPENLPYTEHSKLERNRMREI 197 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + L + + + +E E + F++ +++ +L++ RV + L S Sbjct: 198 MDYLEYNYMNKIQMKDIAEEIHLCESECSRLFKRYMNVSLFTFLQEYRVERSLEFLLSSD 257 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 I +++ + GF DSNY++ +F+R G +P ++R N++K+ Sbjct: 258 DSIMEVAQKSGFTDSNYYAKIFSRVKGCSPQKYRKQNTKKE 298 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 100/274 (36%), Gaps = 11/274 (4%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F V+ + H H+ EL++V G +N Y GD+ I++ Sbjct: 15 FLLPLGIYNVSLGNIEKSIIAHWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGS 74 Query: 73 KHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH-----WRLGSMGMAQ 125 H +++ + +I++ ++L N+ ++ S+ + Sbjct: 75 LHYFSTKENESSTWNSIVFNMDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNE 134 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT----SSETLLDKL 181 + +I + + + L + LL + T + + Sbjct: 135 LKCIILNIIDTYNSKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIV 194 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + + +++ ++ + F++ TG T Q+++ R+ A L+ ++ Sbjct: 195 LEYIQENYNKEIDINRLSAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTD 254 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L I++IS E GF + +YF F + TP ++ Sbjct: 255 LSITEISLEVGFTNISYFIRSFKEKYNTTPKGFK 288 >UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AFT7_9PORP Length = 289 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 10/264 (3%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY----- 76 + YP+D H H E+ V +G+G ++ D G++ + + H + Sbjct: 22 YSSLYPKDEMPLHFHPEIEICYVVKGSGYRMIGDFLEPFEEGEVVLVPTNQPHCWMYNPE 81 Query: 77 --ASVNDLVLQNIIYCPERLK--LNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQ 132 + + P+ L+ L+ + SA Q L + + + + Sbjct: 82 SCEPDGKRRCIVVQFNPDLLQTGLSFFTEWEYAAHRLSAIQQGILLTGETAGKIKSCLEE 141 Query: 133 LEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 + ++ G L+ + T + + + + K Sbjct: 142 MNLLNASERMLMLIRILQQIGTTTDLIPIGLQETAFNGITKNMQRMQLIFKYVIEYYKEK 201 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH-SRLLISDISTEC 251 L + S S F+++TG T ++ + R+ LL++ I++I+ +C Sbjct: 202 ITLSDAANVISMSTTAFCSFFKRETGKTFTNFINEYRIEAVGTLLRNFPDKDINEIAWQC 261 Query: 252 GFEDSNYFSVVFTRETGMTPSQWR 275 GF D YF+ F + MTP QWR Sbjct: 262 GFTDIPYFNRYFKKMKQMTPKQWR 285 >UniRef50_Q3JM08 Transcriptional regulator, AraC family n=53 Tax=Burkholderiales RepID=Q3JM08_BURP1 Length = 339 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 95/276 (34%), Gaps = 14/276 (5%) Query: 15 SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 D+ A + YP V H H E+ ++ G + D G+L + H Sbjct: 12 RDESFRAWSHDYPHTVAKWHFHPEYEIHLIQGSRGKFFVGDHIGDFAPGNLVVTGPNLPH 71 Query: 75 SYASV------NDLVLQNIIYCPERLKLNLDWQGAIPGFNAS--AGQPHWRLGSMGMAQA 126 ++ S + + + + + + + Sbjct: 72 NWISELGPGERVPSRDVVLQFSRDAAEKMVAAFAELQPVLDLIDEASRGVQFPDEIGLAV 131 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLIT 183 + + +S H E+ LF +L R + + +++++ Sbjct: 132 APL---MLELASAHGCRRVEVLMALFDRLASCAARRTLAGPGYRIDAQHYMSSTINQVLA 188 Query: 184 RLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLL 243 L +L + A S + FR+ TG T QYL ++R+ A LL S L Sbjct: 189 YLRQNLPGALREADVAEFAGMSVSTFTRFFRRHTGSTFVQYLNRLRINEACELLMCSALS 248 Query: 244 ISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 ++DI GF + + F+ F GM PS++R L+ Sbjct: 249 VTDICYRIGFNNLSNFNRQFLAMKGMPPSRFRALHR 284 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 13/257 (5%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNI 87 ++ H H++ EL + G H+ +D Y + G+ H + + + + Sbjct: 17 DNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRL 76 Query: 88 I--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 + + E + +PG Q W S + ++ L E + ++ Sbjct: 77 VLYFTKEMIA--------VPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSE 128 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 E + Q+++LL R+ S ++ + +I L + P L++ ++ S Sbjct: 129 EALYFILNQILILLLRN---STETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLS 185 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 L ++F++ T TI QY+ +RV HAQ L + +++IS GF + +F+ V+ Sbjct: 186 PYYLCREFKKYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRS 245 Query: 266 ETGMTPSQWRHLNSQKD 282 TG++PS+ R ++ Sbjct: 246 VTGLSPSKSRKQAKERS 262 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 8/263 (3%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + + + HTH + E+ V +G+GL L+++ Y + DL ++ H+ Sbjct: 35 YITESKFDHEWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERG 94 Query: 79 VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESS 138 + ++ + I+ E + + G + + + + + + E Sbjct: 95 IENVNFEYIVMGIEGVTYFSKEEDEEQGCSIANYYEY-------KHEVLFYLKTILFEVK 147 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSETLLDKLITRLAASLKSPFALDK 197 + + L L++ L R + S P + + + A K LD Sbjct: 148 TKDTEYQSLCQNLLEVLLINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDT 207 Query: 198 FCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSN 257 + ++ + F+Q G++ Y+ Q R+ A+ LL + L IS+I+ GF + Sbjct: 208 LSELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQS 267 Query: 258 YFSVVFTRETGMTPSQWRHLNSQ 280 YF+ F + T +P Q+R NS Sbjct: 268 YFAQAFKKATLTSPLQYRKDNSH 290 >UniRef50_C9XN35 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=C9XN35_CLODC Length = 312 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 15/282 (5%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M +++ L D+F + F H HDF +++I GN + ++ PY++ Sbjct: 24 MDNKIGYLNDNF------KIFNIRDKKDIQFEYHNHDFNKIIIFINGNVTYFVDGIPYKL 77 Query: 61 TRGDLFYIHADDKHSYASVND--LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP---H 115 D+ +I ++ H ++ I PE +K N D + A + Sbjct: 78 KPWDILFISNNEIHKPVIDSNVFYERIAIWISPEFMKKNSDATSDLEKCFKIATENKCNR 137 Query: 116 WRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS- 174 RL + + I Q+ S + LF QL++ LNR ++++ T Sbjct: 138 LRLNIHDIESIKSFIEQINISESNTEFGNEILRNALFIQLMIFLNRIFLKNENMESTEDV 197 Query: 175 --ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 + + K++ + +++ ++D E S+ L ++F+ TG +I+ Y+ Q R+ Sbjct: 198 FYDETIKKVLNYINSNIDDKLSIDSISSEFFISKYYLMRKFKSHTGTSIHNYIVQKRLIL 257 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 A+ L+ + L +S++ +CGF D + F F + G++P + Sbjct: 258 AKSLITNGYL-MSEVCNKCGFNDYSSFVRAFKKNYGVSPKNY 298 >UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Klebsiella RepID=A6T9P9_KLEP7 Length = 274 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 5/275 (1%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 + L + +F Q + + P+D EH H+F ELVIV G+GLHV+N RP I +G Sbjct: 1 MMTLTVEYYFTHPQDKLGMYASDPEDNSQEHGHEFAELVIVEEGHGLHVINGRPLYIQQG 60 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPER-LKLNLDWQGAIPGFNASAGQPHWRLGSMG 122 D+FY+ D H Y + L L N++ P +G + +A + L Sbjct: 61 DVFYVQPGDVHYYDELGTLKLINVLINPAVAFGYLQQMEGLLQQLSAQRAACYGWLAPET 120 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLI 182 + R+++ ++ + + E LF QLV + +S+ L KL+ Sbjct: 121 RSYCRELVEKIFSP-ALRAADNTPLRESLFFQLVTTI---LTAESEAEYSSTRYKLHKLL 176 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 T L + ++ + R + ++ TG+T + YL+++R+ A+ L+ + + Sbjct: 177 TWLQEHCFEEHNWQQLAEQFHLTTRTAFRHIKEATGLTPDNYLKRLRLVSARVKLRETEM 236 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I++++ CGF +SN+F+ ++ + G+TPS R Sbjct: 237 TITEVAYLCGFANSNHFTTLYKKVFGLTPSADRRR 271 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 8/263 (3%) Query: 26 YPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY-ASVNDLVL 84 Y + F H H E+++V +GN + D Y + DL I+ ++ +S D +L Sbjct: 21 YSIEGFKVHWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSITRGKEDNLL 80 Query: 85 QNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFA 144 ++ P L + + + R + ++ E S+ P Sbjct: 81 LSLQIDPVTLSQYDPNFSRL--VFDCKSFMYCKDNQEKFDVVRYYMAKVVWEYSKKKPGY 138 Query: 145 NEMAELLFGQLVMLL-----NRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFC 199 L L N + S L ++++ + ++ +L Sbjct: 139 QLRIASNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILSYINENIDKKISLKTIA 198 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 S L + + G+T +Y+ +R+ A LL S I+++S E GF + F Sbjct: 199 KNEHISYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESGFANIKLF 258 Query: 260 SVVFTRETGMTPSQWRHLNSQKD 282 + +F G +P Q++ ++ + Sbjct: 259 NKLFKETFGASPLQYKKIHKESS 281 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 111/275 (40%), Gaps = 12/275 (4%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 ++ D S+ + HTH F EL +V G G + + Y + +G Sbjct: 7 KITDKPSDTTKSNLIYITYTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKG 66 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 D ++ + H+ S L+ I + LNL + FN + P Sbjct: 67 DFILVNPNASHTEKSDEKNPLEYIAVAVDNFSLNLTDTNHLM-FNCISKNP--------- 116 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSETLLDKLI 182 + + + E + +++ + + + +++ + R + D+ P ++ KL Sbjct: 117 -NIIKYMDSMLAEQEGNKAYSDHICQNILEIILIEILRITKSDIDTEPTVNASKECFKLK 175 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + ++ S +D ++ ++ L F + G + YL +R+ A+ LL++S Sbjct: 176 KYMDSNYASKITIDDLAKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDY 235 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 IS IS GF +YF+ F + G++P +R+ Sbjct: 236 SISQISQSTGFSSQSYFTQCFIKSCGLSPKAYRNR 270 >UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Oceanospirillales RepID=A6VU91_MARMS Length = 298 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 95/292 (32%), Gaps = 17/292 (5%) Query: 1 MAHQLK-LLKDDFFASDQQAV-AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPY 58 M + K + + D + + + YP D+ H HD EL + +G + D Sbjct: 1 MQNTAKRITPEYEIVEDNETIRYLEHGYPCDLIRWHAHDDYELHFIVATSGKVFVGDYIG 60 Query: 59 RITRGDLFYIHADDKHSYASVND-----LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ 113 + G L H++ D L I + E + + + Sbjct: 61 NYSPGQLILTGPRLPHNWICQKDQEEVQLRDMVIRFDHESFSNGMKIIPELAEILPMLAR 120 Query: 114 --PHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 + V ++ + + L Q + +R S Sbjct: 121 AKSGIEFYDQDHEYLKDVFQKV----RDSTGLSRLILALPLLQKLAQSRSYRLLSTVQID 176 Query: 172 TSSETLLDK----LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQ 227 S L + ++ ++ + L S+ + F++ TG +++ + Sbjct: 177 LKSSETLQRKINTVVDYVSQNYSQDITLSSVASLIGMSDSHFSRFFKKATGNRFIEFVNR 236 Query: 228 VRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 VRV A LL + I+ I + GF + F+ F G+TP +R ++ Sbjct: 237 VRVSRACSLLTETDQQIATICFQVGFNNVANFNRRFHELKGVTPRDFRTQSN 288 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 102/273 (37%), Gaps = 8/273 (2%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 +Q+ V + D + + H H+ E++I V Y ++ ++ I + HS Sbjct: 16 NQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHLSEKEIIVIPPGELHS 75 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 + + + + + +P F+++ L AR+ I + Sbjct: 76 MPAQDGRRIIF-QCDNSVISEVPSLESILPVFSSAVHITP-SLNKELYVLARKNILDIYT 133 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTS------DSLPPTSSETLLDKLITRLAASL 189 E P A+ + ++ + + S + + + + + Sbjct: 134 EYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDESRKFGLVTKYINQNY 193 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 L+K A S+ + F++ M+ QY+ R+ A+ L+ S L I++++ Sbjct: 194 MYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAERLMADSSLPITEVAM 253 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 +CGF F+ F + G TP+++R L D Sbjct: 254 QCGFSSLTTFNRAFRKAKGCTPTEFRKLFKIND 286 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 110/283 (38%), Gaps = 19/283 (6%) Query: 13 FASDQQAVAVADRYPQDVFA----EHTHDFCELVIVWRGNGLHVL-NDRPYRITRGDLFY 67 F ++ +AV P D F H H + ELV V+ G+ +++ N + +GD+ Sbjct: 47 FNRLKENIAVTMHGPPDPFDAEGLMHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILL 106 Query: 68 IHADDKHS-YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAG----------QPHW 116 ++ + H Y ++ D + NI+ P+ + ++ + ++ + + Sbjct: 107 LNPNALHCPYTTLEDDYIFNIVLKPKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYM 166 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP--PTSS 174 + G + Q + + E AE L L R L Sbjct: 167 LFHTNGEKRIAQTMENIITELYSKEMCYRRAAEAELIVLFTCLARIYKEQLGLKGFDEVK 226 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + +IT + + L D S L + ++ T ++ + ++ +A Sbjct: 227 NKQVTDIITYMDENFSQA-TLQSVADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENAC 285 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 L+ + + + +I+ GF D++YF VF ++ G +P+++R Sbjct: 286 TYLETTDIPMREIAELVGFNDASYFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 103/274 (37%), Gaps = 5/274 (1%) Query: 8 LKDDFFASDQQAVAVADRY--PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + D + + + +V+ R ++ H H E+ + G + DR I GD+ Sbjct: 1 MGDFQYDNGEGTFSVSYRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDI 60 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 I + H + + +I + + + + Sbjct: 61 VIISPNILHRTTNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLA 120 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP---PTSSETLLDKLI 182 ++ + E S+ P A L QL+++ RH +S P+ + +++ Sbjct: 121 IETMLQTMIAEMSEKKPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVV 180 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + + + +L ++ S L + F++ TG T +YL VR+ A+ LL+ S + Sbjct: 181 RYMNSHYMNELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSM 240 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 ++ I+ GF +F VF TG P +R Sbjct: 241 KVNLIAKRVGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 103/266 (38%), Gaps = 7/266 (2%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + + R +H H CE+ GN ++ ++ Y+I G L IH D H+ S Sbjct: 17 TIDRSRRDSIYNMVKHWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFS 76 Query: 79 VNDLVLQNII--YCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHE 136 + ++ Y + G ++ + + ++ ++ E Sbjct: 77 GKYIYHDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADE 136 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRY-----TSDSLPPTSSETLLDKLITRLAASLKS 191 M E +L + + R + + L++++ + + S Sbjct: 137 VIHKEYNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYAS 196 Query: 192 PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTEC 251 +L++ + L + F++ TG TI +Y R+ +Q LL+ + I++I+ + Sbjct: 197 IHSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKS 256 Query: 252 GFEDSNYFSVVFTRETGMTPSQWRHL 277 G+ + Y++ VF + T +P Q+R Sbjct: 257 GYSNITYYNRVFKKYTETSPLQYRKK 282 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 105/272 (38%), Gaps = 13/272 (4%) Query: 13 FASDQQAVAVADRYPQDVFA--EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 F+++ V + + ++ + HTH F EL V G+G ++ ++ + I + DL ++ Sbjct: 14 FSTEAVLVNASSSHYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNP 73 Query: 71 DDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVI 130 +H+ S++ L + + + Q F+ A Sbjct: 74 HIQHTEISLSASPLSYYTVGVDGISFSFHDQKEFQIFH----------YHQKHADLLFYF 123 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASL 189 L E + E+ + L+ L R + L P+ + + L + Sbjct: 124 HSLFQELDEKNDGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHY 183 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 L++ + ++ L +F + G++ YL R+ + LL+++ ISDI+ Sbjct: 184 SDDINLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAH 243 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 GF +Y + F + GMT ++R + Sbjct: 244 LAGFSSQSYLAQSFRKYCGMTAGEYRRSKKNQ 275 >UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SE27_HAHCH Length = 288 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 90/284 (31%), Gaps = 9/284 (3%) Query: 5 LKLLKDDF-FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +K L + + D + + F H H EL G + D R G Sbjct: 1 MKALYEKVRYPEDASWRFFLRQLDELPFQWHYHPEYELTYTLNSAGQRYVGDHVDRYESG 60 Query: 64 DLFYIHADDKHSYAS------VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH-- 115 DL I + HS+ S + + + + + L+ Q Sbjct: 61 DLVLIGPNLPHSWRSSQRPDEDKPHTVYVLWFNQQWVDRLLENFPEYGDVGDILKQSRRG 120 Query: 116 WRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE 175 A ++ L + + Q+ + Sbjct: 121 LTFSPTDHASVERLFTALPTQGPKERLLTLLSLLGGLAQIPHTPLASANFCTGTTSRREQ 180 Query: 176 TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQY 235 +LD ++ + ++ + S + F + + NQYL Q+R+ A Sbjct: 181 DILDGILDCAHLAFADKLTIEDMARRHNMSVSKFSRFFSKHMNQSFNQYLTQIRLGQACS 240 Query: 236 LLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 L ++ I+ I+ + GF + + F+ +F + G+TP +R + Sbjct: 241 KLINTAAPIALIAEQTGFNNLSNFNRLFKKHKGVTPQGFRKRFT 284 >UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUA4_CHRSD Length = 303 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 100/276 (36%), Gaps = 24/276 (8%) Query: 24 DRYPQDVFAEHTHDF------------CELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 + P+ F H HDF EL ++ G + + D R G+L + + Sbjct: 20 SQDPKFSFYWHCHDFPAPIARWNYHPEYELHLIRYSEGNYFVGDYIGRFGPGNLVLVGPN 79 Query: 72 DKHSYASVNDLVLQNI-------IYCPERLKLNLDWQGAIPGFNASA--GQPHWRLGSMG 122 H++ S D I + E L+ + + + + Sbjct: 80 VPHAWLSDPDDSRSVIKGRDVVLQFKGEWLEHMMALCPELNCLSTLIEDSRQGVAFQGEE 139 Query: 123 MAQARQVIGQL-EHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 + +++ + E + + + + L L+ Y ++ +S++ +D + Sbjct: 140 ATRCGELLITMGEQDHAGRLLTMLTILRGLSQCDYATLSSREYGLEATGVSSAQ--VDAI 197 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + + + S + F+ TG T +LR++R+ HA LL R Sbjct: 198 LRYIHDHFHEELRMSALAARNGMSPSSFSRFFKHATGDTFVAFLRRIRIGHACQLLLEGR 257 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+DI + G+ + + F+ F GMTP Q++ Sbjct: 258 QSIADICFQVGYNNLSNFNRHFRELKGMTPRQYQQS 293 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 100/297 (33%), Gaps = 20/297 (6%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 ++ K + H HD EL+ + +G ++ + + + Sbjct: 8 EIKKHGTAYFPCAFYYTESDSENLIVKHHWHDQLELIHMKKGEFQVEIDMDKHVVHEETI 67 Query: 66 FYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQ----GAIPGFNASAGQPHWRLGSM 121 +I++++ H S + I++ + L ++ P N PH+ Sbjct: 68 CFINSEELHFIKSNHPCKESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIFKKD 127 Query: 122 GM-AQARQVIGQLEHESS-------------QHVPFANEMAELLFGQLVMLLNRHRYTSD 167 + + ++ + + +++ +L + Sbjct: 128 KHGEEILKEYSEILEAYKISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENNLLIK 187 Query: 168 SLPPTSSE--TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYL 225 + I+ + + + + + +E+ + F++ G T +Y+ Sbjct: 188 ENNKNKDYRVEYIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPMEYV 247 Query: 226 RQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + R+ A+ LL+ + + DI ECGF + F VF + TG+ P ++R K Sbjct: 248 NEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFINKK 304 >UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8U7_9BACT Length = 298 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 109/275 (39%), Gaps = 17/275 (6%) Query: 18 QAVAVADRYPQDVFAE-----HTHD-FCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 Q RY H HD F ELV+V G+ HV + I GD++ I Sbjct: 11 QNFGFEVRYHVHDREYGIRDRHAHDGFYELVVVRSGSATHVHDGVKSHIESGDVYLIPPG 70 Query: 72 DKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP-----------HWRLGS 120 + H YA+ L + N+++ + L P A G R Sbjct: 71 EPHYYANARQLGIYNVLFTGDFFAGLLAEFPGAPDIEAYLGLSGGALPEGHRADVRRFDP 130 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK 180 + ++ ++ E +Q + A M +++ L+ RH S S+ + Sbjct: 131 ELFFRITALLDEIVEEETQELSGARLMILSNALKILTLICRHARKSAERNIGSAGYRIAS 190 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 L+ L A ++L + + S R+QFR+ G +L +R+ A +LQ Sbjct: 191 LVKTLEADFAGEWSLRRMAEHTGFSVACFRRQFRRIIGEPPVAWLLSLRLEKAAMMLQTG 250 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 I++ + CGF DSNYF+ +F R G TP +R Sbjct: 251 DGSIAETAEACGFPDSNYFTRMFHRRFGATPRAYR 285 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 105/275 (38%), Gaps = 7/275 (2%) Query: 6 KLLKDDFFASDQQAVAVADRYPQDVF-AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + ++ + + F H HD E++ V G+ V + Y + + Sbjct: 3 QYTHENVRSIPHLPIYCDRYEDYRQFSPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENE 62 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 F I+++ H S + + + L +D G I + GS Sbjct: 63 FFVINSNKIHGTQSYERVRVLLVQIPYAYLDSYIDDYGQIRFRECYETEN----GSRKYE 118 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD--SLPPTSSETLLDKLI 182 Q + ++ + H + + + +L + + + + L ++ Sbjct: 119 QMKSLLKSIAHIYRKKGKGYELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVL 178 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 +A + + P AL + D AS ++ + F++ G+T +Y+ QVR+ H L + Sbjct: 179 RYVAKNYQEPIALKEAADIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATED 238 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+DI GF + FS +F + GMTP + R L Sbjct: 239 SITDILEHNGFTNYKVFSRMFKAQFGMTPRELRKL 273 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 102/279 (36%), Gaps = 9/279 (3%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDV-FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +++ + Q H H E + V G + ++ ++ G Sbjct: 17 MEIKQHGSSDYPFQYYYDNLELFDFHCIEWHWHREFEFLYVESGEVTCGIGEKQIILSEG 76 Query: 64 DLFYIHADDKHSYASVNDLVLQNIIYCPERL---KLNLDWQGAIPGFNASAGQPHWRLGS 120 + +I++ H + + + ++ N + PE + + + +P +++ ++ Sbjct: 77 EAIFINSKILHRFYAPSGGIIPNFVCMPEFIAPENSLIYKKYILPIISSNIYFQRFQTDE 136 Query: 121 MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS----SET 176 + + Q + ++ L L + + SD + ++ Sbjct: 137 LWQTKIIQTMIKIMEIQGNEKI-RELATLALMQDLWLTFYENVKLSDKGDVQTVDEVAQK 195 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 + ++ + + +LD+ S+ F + T YL R+ A +L Sbjct: 196 RVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGYRLQAASWL 255 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 L+++ + I+ E GF + +YF +F + +TPS++R Sbjct: 256 LKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 108/268 (40%), Gaps = 14/268 (5%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS-VNDLVLQ 85 P + H HD+ E++ V G+ + ++ +GD+ ++ H + + + Sbjct: 79 PPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHIF 138 Query: 86 NIIYCPERLKLN----------LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 NI+ + + ++ + + + + + I L Sbjct: 139 NIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFRCSQNHLIEETITSLIA 198 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL--LDKLITRLAASLKSPF 193 E P ++ + L L+R + E + L +I+ +A + +S Sbjct: 199 EYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGILPDIISFIAQNYQS-V 257 Query: 194 ALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGF 253 L + + + S + + TG T ++ + ++ HA+ LL + L I+DI+ + GF Sbjct: 258 TLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIGF 317 Query: 254 EDSNYFSVVFTRETGMTPSQWRHLNSQK 281 DS+Y + VF + G+TP+Q+R ++ Sbjct: 318 NDSHYLNKVFKKRFGITPTQYRRGMKKE 345 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN---DLV 83 P H H + E+ G + + R+ GD +++ + H ++ Sbjct: 33 PDRAGPVHWHPYFEIATAQSGVLDYQVGQTHIRLEPGDSIFVNQNMLHGIRQLSGAAPDP 92 Query: 84 LQNIIYCPERL--KLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEHESSQ 139 L +++ + + + ++ I + P +R S RQ I + + Sbjct: 93 LPILVFSGTVVAPEHSAVYRKYIQPVLGCSTLPFVVFRHDSDLWQAVRQQIHRACDAMRE 152 Query: 140 HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS----SETLLDKLITRLAASLKSPFAL 195 + ++ + RH + LP + ++ L K+++ L P L Sbjct: 153 RPACYELTVQRSLCSVLEAIFRHLDSLPPLPSSRVQLTAQIRLQKMLSYLYEHYAQPVTL 212 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 A S + F+ G + + L Q R+ A +LQ + + +IS CGF Sbjct: 213 ADIAAAAHISRSEAGRCFQAYLGCSPVEALIQYRLQRAWRMLQETDMTQQEISLACGFHS 272 Query: 256 SNYFSVVFTRETGMTPSQWRHL 277 YF F + G P + R L Sbjct: 273 VQYFRRQFRKRYGCAPGEKRKL 294 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 87/257 (33%), Gaps = 5/257 (1%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLVLQ 85 H HD + V++ +G L +N+ + GD +I++ H D Sbjct: 35 NGYIPLHWHDEIQFVLILKGIALFQINEEKIEVHEGDGLFINSGYLHMAEEKEGSDCTYI 94 Query: 86 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL--GSMGMAQARQVIGQLEHESSQHVPF 143 + P + + + + S P+ L + ++ Q Sbjct: 95 CLNVSPHFVLSQELYSSYVQPYMFSTNLPYLFLAGNQQWAKNILDAVKKINQLIQQKTSL 154 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRLAASLKSPFALDKFCDEA 202 + + L + + + + +++ + L+ Sbjct: 155 YEIDITMQLTLMWKNLVVNGFQLEYDQSEMIKSHRMKQMLNWIHLHYVEKITLEDIAKAG 214 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S + F++ T +Y+ R+ + LLQH ++++S + GF ++YF Sbjct: 215 QLSRSECCRYFKRMLNKTPLRYVMDYRIQKSLLLLQHPESNVTEVSYQVGFNSTSYFISK 274 Query: 263 FTRETGMTPSQWRHLNS 279 F + MTP ++ +NS Sbjct: 275 FQQAMNMTPLSYKKMNS 291 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 101/278 (36%), Gaps = 14/278 (5%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 + F + + H H+F E+ I+ G +++ + Y T G Sbjct: 1 MNYTNSRTFNPEILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGT 60 Query: 65 LFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMA 124 +F + +H + L L + P +A H Sbjct: 61 VFLFNPRTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLH------G 114 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD--------SLPPTSSET 176 + Q+ HE + + + L +L++ + R S Sbjct: 115 AFLEKAWQIVHELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRN 174 Query: 177 LLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYL 236 L++ I L L++ + + L + F+ TG+ YL Q+R+ HA+ L Sbjct: 175 LVNHTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKEL 234 Query: 237 LQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 L++ L + +++ G+ED+ +FS +F + G +PSQ+ Sbjct: 235 LKNDSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_D0XE38 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XE38_VIBHA Length = 304 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 97/270 (35%), Gaps = 16/270 (5%) Query: 24 DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS----- 78 R F H H EL + G + D DL + + H++ S Sbjct: 29 RRLEAIPFEWHFHPEYELTLTLNSKGERYIGDTISEYEDFDLVLLGPNIPHTWQSRTSLE 88 Query: 79 -VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEH 135 + + + + + ++ F+ + H Q + +L+ Sbjct: 89 TDKEQKVYVLWFETQWIEELSRLFPECQAFSPLLLEAHRGLHFSQALAKQLLPLFEELDT 148 Query: 136 ESSQHVPFANEMAELLFGQLVML-----LNRHRYTSDSLPPTSSETLLDKLITRLAASLK 190 + + + +L ++ ++ + + LL +L+ + A+ Sbjct: 149 ATPMQKL---TIMLSILDELSSTADYQPISVNQTLNRQDSDKRQQRLLSQLLEAIHANYT 205 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTE 250 P ++ + SE L + F++ G +++ Y+ QVR+ LL + +S ++ Sbjct: 206 EPLSVTELASLVGMSESTLGRFFKKMMGQSVSHYITQVRLGKGCSLLVQTDKPVSLVAEL 265 Query: 251 CGFEDSNYFSVVFTRETGMTPSQWRHLNSQ 280 GF + + F+ +F + +TP +R +Q Sbjct: 266 SGFNNLSNFNRLFLKYKQLTPKAFRAKFTQ 295 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 103/274 (37%), Gaps = 14/274 (5%) Query: 21 AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH-SYASV 79 + + QD H H++ EL V+RG +H + R+ +GD ++ H Y Sbjct: 60 HLYNPNYQDERLFHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEH 119 Query: 80 NDLVLQNIIYCPERLKLN----------LDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 V+ NI+ E + + L + + + Sbjct: 120 PQDVVFNIMLSKEIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPL 179 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT--SSETLLDKLITRLAA 187 I + E + + + + QL L R + + LI + Sbjct: 180 IKLMVEEFIEDDLCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQQ 239 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 L+ +L+ + S + + FR + G + + L +R+ A+ LL+ + L + +I Sbjct: 240 HLRQ-LSLESLAEAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEI 298 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 + G D++Y + +F ++ G+TP Q+R Q+ Sbjct: 299 ADSIGVNDTSYLNKIFKKKYGLTPLQYRKQFQQE 332 >UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATK5_9FLAO Length = 288 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%) Query: 27 PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDL---- 82 P H H+ +LVIV G G + D GD+ ++ H + + Sbjct: 24 PHFDPHWHFHNEYQLVIVLEGTGTRFVGDDISHFEAGDMVLTGSNLPHVWRNDETYFQGL 83 Query: 83 ----VLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEHE 136 I + + ++ + + G + H + ++++ + Sbjct: 84 SLVTHCIVIYFSLDFMEGEFLNKEEMKGIRELLDRSHRGLEISGEIRDTVKKIMCDMLRL 143 Query: 137 SSQHVPFANEMAELLFG-QLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFAL 195 + + Q + +N+ Y + S + + + + + K L Sbjct: 144 KGFDGVLSLLQILNILSSQKLKFINKEGYLNTVTD--SDSKRMRTIHSYILDNFKGDIRL 201 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 ++ A+ S + F+ T T + ++ ++R+ A LL + L I I+ ECG+ Sbjct: 202 EEVASLANLSPTSFSRYFKSHTNKTFSNFVAELRIGAACKLLHSNDLSILGIAHECGYNT 261 Query: 256 SNYFSVVFTRETGMTPSQWRHLNSQ 280 + F+ F T +P ++R + Sbjct: 262 LSNFNKKFKELTNDSPLRYRKRYQK 286 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 108/275 (39%), Gaps = 14/275 (5%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + ++D H HD E++ V +G ++ Y + D F + Sbjct: 15 ENPFSQYHISDVKRAFQIPVHWHDELEIIYVKQGKLHVTISGENYIGSPKDAFVVSPGSL 74 Query: 74 HSYASV-NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQ 132 H S D ++ E + D + + + A + + Sbjct: 75 HLMGSPTGDADYYTFLFPLEYISFQTDDLME-KSILSPLKRGRLMISPQINDTAADICER 133 Query: 133 LEHESSQ-----------HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKL 181 L + Q A ++ + + + R+ ++ ++ T ++ Sbjct: 134 LIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGTNGTNTTE-KEM 192 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 IT + + +L +F + SE+ + + F++ +T++QY+ +R+ HA+ LL+ S Sbjct: 193 ITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEEST 252 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 +++++ G+++ +YF F + G++P ++R+ Sbjct: 253 ASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 113/282 (40%), Gaps = 12/282 (4%) Query: 12 FFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 FF D + + HTH+F E++ V+ G+ ++ + GDL +++ Sbjct: 45 FFRGDNRFSVILHPKLAIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLLFLNIQ 104 Query: 72 DKHSYASVN-DLVLQNIIYCPERLKLNLDWQ---------GAIPGFNASAGQPHWRLGSM 121 H + + D ++ NI+ P+ L+ +L + + L Sbjct: 105 TGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSEKYLLFQE 164 Query: 122 GMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNR-HRYTSDSLPPTSSETLLDK 180 + ++ E + PFA ++ E F LV LL R +R + + + + + Sbjct: 165 NTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIPGKAFVPE 224 Query: 181 LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS 240 ++ L+ L + + L ++ TG + ++ ++ A+ L+ + Sbjct: 225 ILQWLSNHYAGA-TLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREAERYLKET 283 Query: 241 RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 L + IS + G++D+ YF VF TG TPS++R + Sbjct: 284 SLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQENS 325 >UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZY9_PAESJ Length = 283 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 9/267 (3%) Query: 19 AVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS 78 + Q H+H E+ G ++ D Y + G+L ++ H + Sbjct: 10 PIEAMYNTSQIPTDFHSHLEYEIYYFHSGKCKLLIGDSIYELAPGNLILMNGMTLHYPSI 69 Query: 79 VNDLVLQN--IIYCPERLKLNLDWQGAIPGFNASAGQ--PHWRLGSMGMAQARQVIGQLE 134 N + + P IP Q L + A+ ++ +L Sbjct: 70 DNRYEYCRTVVHFDPAFASGLFQPPFLIPLLLPFERQTNRLISLKAEEQARIEPLLERLC 129 Query: 135 HESSQHVPFANEMAELLFGQLVMLLNRHRYTSD----SLPPTSSETLLDKLITRLAASLK 190 + P +++ L F +L++L+ + S P + + KLI + + Sbjct: 130 QLRQSNDPLSHDRLILCFQELLLLIYEFAHMPSYGQASPPGSIKHQNVQKLIAYIEEHYR 189 Query: 191 SPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL-QHSRLLISDIST 249 LD D ++ L + F++ TG+T+ YL Q R+ A+ L + I++ + Sbjct: 190 EDLELDDIADYMHLNKHYLVKIFKETTGITLFHYLYQRRINQAKMLFTMNPDRSITETAF 249 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRH 276 E GF+ ++FS F + TG +P +R Sbjct: 250 EIGFKYVSHFSQTFKKFTGQSPDDYRK 276 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 103/276 (37%), Gaps = 10/276 (3%) Query: 12 FFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 + + + + + + H HD ++ IV +G+ ++ ++ Y + G +I+ Sbjct: 21 YSFPFEVSFSEIRKLSKGYVKLHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQ 80 Query: 72 DKHSYAS--VNDLVLQNIIYCPERLKLNLDWQGAIPGFN-----ASAGQPHWRLGSMGMA 124 H S D + I++ + LK+ + + Sbjct: 81 RIHMAKSVGDEDCIYHAIMFNAKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQ 140 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH---RYTSDSLPPTSSETLLDKL 181 A + I + + + +LL + + P +E + + Sbjct: 141 DALKYISDIINVDIIQDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDV 200 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 ++ + + + L D S+ + F++ M+ YL R+ + LL++S Sbjct: 201 LSFIHQNYSNKITLQDIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSS 260 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 L I DIS GF + +++ +F ++TG TP ++R+ Sbjct: 261 LSILDISENVGFNNVSHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria RepID=Q4ZTP2_PSEU2 Length = 307 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 94/298 (31%), Gaps = 17/298 (5%) Query: 1 MAHQLKLLKD----DFFASDQQA----VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHV 52 M + + D + +P + H H EL ++ +G Sbjct: 3 MTSPMNKTTRIADPSYELMDDHNGLSIIYREHGFPCPLVRWHFHKEYELHLIVASSGKVF 62 Query: 53 LNDRPYRITRGDLFYIHADDKHSYASVNDLVLQN------IIYCPERLKLNLDWQGAIPG 106 + D LF + H++ S D + + E L+ + Sbjct: 63 VGDYIGNFNPASLFLTGPNLPHNWISQIDDGEVVPKRDMLVNFTDELLESGNQVFAELKT 122 Query: 107 FNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVM---LLNRHR 163 + + + RQ + Q++ + +L L Sbjct: 123 LTPLLERARYGIEFRCKRTIRQAMKQMQKIADSRGITRLGHFFILLELLAASDDYQLLSG 182 Query: 164 YTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQ 223 S ++ + + A L++ + + F+Q TG + Sbjct: 183 TAVAHTADEHSVDRTNRAVDYIFAHYGRELPLEEVAEYLGMKPTYFSRVFKQATGRCFVE 242 Query: 224 YLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 ++ ++R+ + LL ++D+ E GF + + F+ F + GMTPS +R L Q+ Sbjct: 243 FVNRLRISKSCELLADGDKPVTDVCFESGFNNISNFNRRFQQLKGMTPSHYRRLAVQR 300 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 109/284 (38%), Gaps = 10/284 (3%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 +K ++ + VA + + H HD E+V V G +++ + +G+ Sbjct: 1 MKYEIINYDEKLPIKIFVAKL---NNYPPHWHDEIEIVKVLEGKIKVSISESVCFLEKGE 57 Query: 65 LFYIHADDKHSYASVN-DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGM 123 + I + H S+ + +LQ I + ++ + I N + Sbjct: 58 MAIIKHKEIHQIQSLENESLLQIIQINYKFMETHFPHLSRISFENNLLNISK-DINLNVA 116 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-----RYTSDSLPPTSSETLL 178 + +Q+I ++ + S ++ + + + + + Sbjct: 117 SNLKQLINEMINYLSVRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRM 176 Query: 179 DKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQ 238 K+I + + + ++ + ++ + F++ TG+++ QY+ +R+ A LL Sbjct: 177 KKIIEYIEQNYMNEININTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLI 236 Query: 239 HSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 + I++I CGF++ YF VF +P ++++ ++ Sbjct: 237 KNEDSITNIILSCGFKNIKYFYKVFREVYKCSPLEYKNNRQERS 280 >UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SUZ2_9FIRM Length = 298 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 12/259 (4%) Query: 29 DVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--DLVLQN 86 H H F E++ + G + Y + GDL + H+ S + Sbjct: 28 FPILPHWHYFVEILYMVEGKAYVEAGEENYVLEPGDLIVFYPQMAHAIYSTGQLPIRYYV 87 Query: 87 IIYCPERLKLNLDWQGAIPGFNASAG-----QPHWRLGSMGMAQARQVIGQLEHESSQHV 141 + + P L ++ +I A A ++ + +Q+I + Sbjct: 88 LKFDPAHLNISGSALPSISSLIAMAAVEQKLSVYFSKEKFNQEKMKQLIQGSVKALEEKQ 147 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS-----ETLLDKLITRLAASLKSPFALD 196 + + + L+ + R ++ ++ + ++ Sbjct: 148 FGYDIIMHSNYCLLMAEILRIWKQEGFQIKKRKKETVLSEKFTEVSEYISQHYQEDLSVA 207 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + ++ S F++ G T + + VR+ A+ LLQ + ++ IS E GF D Sbjct: 208 ELAEKFHMSYSYFAAIFKEYYGQTCKEMILTVRLQKAEDLLQFTDFDLTYISQETGFCDC 267 Query: 257 NYFSVVFTRETGMTPSQWR 275 ++F F ++ G+TP ++R Sbjct: 268 SHFIKAFKQKYGVTPRKYR 286 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 101/283 (35%), Gaps = 14/283 (4%) Query: 5 LKLLKDDFFASDQQAVA-VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 + + + + + H H E+ V G G ++ D R + G Sbjct: 1 MTIAFEKLVPPPGHSFRCFERSALETPAKWHRHPELEITYVPYGTGTRLVGDHVARYSPG 60 Query: 64 DLFYIHADDKHSYASVN-------DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW 116 DL + H++ S + + I + + L + + Sbjct: 61 DLVLSGENLPHTWLSDDFVGKKFDRHIAYVIQFSNDFLGSTFFESPELNDVRLMLHKARR 120 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP---TS 173 L + A Q +G + + ++ L+ S+ P + Sbjct: 121 GL--LFSPSAVQRVGDIMKLMPEQQGLTQLISLFNCLNLLAEEGGEVLASEGYTPGFDHA 178 Query: 174 SETLLDKLITRLAASLKSP-FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCH 232 S+ +DK + L+ P + C E + + F++ TG T+ QY+ ++R+ Sbjct: 179 SDWRIDKACNYINEHLEDPELSHAAICKEVDMNPSSFSRMFKRATGRTVTQYVSELRIGI 238 Query: 233 AQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 A LL + I D+S + GF++ + F+ F + MTP ++R Sbjct: 239 ACRLLMETGDSILDVSLKSGFDNLSSFNRSFRKIKQMTPREYR 281 >UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3C3_9BACL Length = 295 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 15/280 (5%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F +D H+H F E+V+V G G H +N+ R+T+ D+F + A Sbjct: 6 FFTDSLPFYFNRVEETFDLQMHSHRFVEIVLVDEGEGFHFINEDIVRVTKNDVFLLPAGT 65 Query: 73 KHSYASVN-----DLVLQNIIYCPERLKLNLDWQGAIPGFNASAG---------QPHWRL 118 +H + + L++ N +Y P +L L+ S P W Sbjct: 66 RHVFRPGHAGSRRPLIVYNCLYEPGKLLSCLEHLPGFHELIRSRPYLFEGAAPPSPGWLH 125 Query: 119 GSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRY-TSDSLPPTSSETL 177 G + E ++ P F +L ++L RH S + Sbjct: 126 LRDGGSPWNIWFRGAYREFTERKPGYLLQLYGRFIELAVMLERHLERLGSSSAAEPENRM 185 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 +++++ R+ S + F SER + FRQ G T + Y+R R+ ++ LL Sbjct: 186 MEEVLRRIDTDYASRLSARSFAAATHLSERHFHRLFRQYAGCTFHDYVRNKRMERSRELL 245 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 +RL + +I G+ D +F +F + TG++P+++R Sbjct: 246 ASTRLPVMEIMRSVGYADKKHFLSLFKQSTGVSPTEYRRQ 285 >UniRef50_B2N4J2 HTH-type transcriptional activator RhaR n=2 Tax=Enterobacteriaceae RepID=B2N4J2_ECOLX Length = 199 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 197/197 (100%), Positives = 197/197 (100%) Query: 86 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 145 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN Sbjct: 3 NIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFAN 62 Query: 146 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS Sbjct: 63 EMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 122 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR Sbjct: 123 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 182 Query: 266 ETGMTPSQWRHLNSQKD 282 ETGMTPSQWRHLNSQKD Sbjct: 183 ETGMTPSQWRHLNSQKD 199 >UniRef50_B4D507 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D507_9BACT Length = 288 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 106/287 (36%), Gaps = 18/287 (6%) Query: 5 LKLLKDDFFASDQQAVAV-ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +K+ + Q++ V R P H H +L +V +G+G ++ D + G Sbjct: 1 MKVTYHQVTQTTQESFRVMELRGPDYKCTWHFHPEYQLGMVVKGSGHRIVGDNIGPLEAG 60 Query: 64 DLFYIHADDKHSYASVN-------DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHW 116 ++ + + H++ + +L I + + L + + + + Sbjct: 61 EISLLGPNLPHAWQFEDAPRGQRKELHGIIIYFREDFLGADFFQRPEAERIHRLLKRAAV 120 Query: 117 RLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF------GQLVMLLNRHRYTSDSLP 170 L + R+ L + FA + L + ++ + + Sbjct: 121 GL--QVRGKTRRTAAALMQALPRRQGFARVLDLLQLLDLLAGSEELVPICSAGFLPQL-- 176 Query: 171 PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRV 230 P L ++ + + P D+ A S + F+ +TG T ++++ ++R+ Sbjct: 177 PDQHGERLRRVCELIQQRIAEPLNRDEIARLAHFSPGAFSRFFKARTGKTFHEFVNELRI 236 Query: 231 CHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 A LL L I++I+ CGF + FS F R P+Q+R Sbjct: 237 GRACRLLAEQELNITEIALGCGFANVASFSRSFRRAKRCNPTQFRRK 283 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 15/280 (5%) Query: 12 FFAS-DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA 70 +F + + + R H HDF EL+ V++G+ +++ + + GDL ++ Sbjct: 48 YFDNLPDEILVSLHRGNHRDRYLHNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNP 107 Query: 71 DDKHS-YASVNDLVLQNIIYCPERLKL----------NLDWQGAIPGFNASAGQPHWRLG 119 + H+ +A + ++ NII P + ++ + + Sbjct: 108 NALHAPFAPGEENIVVNIIVRPSVFENVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFP 167 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT--SSETL 177 + ++ L E H + + + QL L R + + L Sbjct: 168 KDEEHPIKFIMDMLIAEYLSHDICYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQL 227 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 + +I+ + ++ L + + S + + TG ++ + +R+ A+ L Sbjct: 228 VVDIISHINQNIA-TVTLKELSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYL 286 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 ++ L I++I+ GF DSNYF VF ++PS++R Sbjct: 287 ENKDLTITEITQAVGFSDSNYFYKVFKNRFNLSPSEYRKQ 326 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 115/258 (44%), Gaps = 6/258 (2%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYAS- 78 P + F H H E+ V +GN + L + + ++ I ++ +H++ + Sbjct: 29 FRFVSFRPFETFGPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAG 88 Query: 79 VNDLVLQNIIYCPERLK-LNLDWQGAIPGFNA--SAGQPHWRLGSMGMAQARQVIGQLEH 135 D L + + PE N D G + + + + + + + + ++ + Sbjct: 89 SEDTTLMQLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVN 148 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFAL 195 E +Q + + + + +L++L+ R+ ++ P + L K I+ + + +S + Sbjct: 149 EMNQKSKYYQYLVVMYYAELLILIYRYL--DEAYLPICTNDSLKKAISYIRLNYQSDITI 206 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 + ER LR+ F Q ++ YL Q+R+ A LL+++ + + ++ CGF+ Sbjct: 207 SDVASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQS 266 Query: 256 SNYFSVVFTRETGMTPSQ 273 YFS +F ++ G++P + Sbjct: 267 PQYFSRIFKQQMGISPRE 284 >UniRef50_B1Y6T0 Transcriptional regulator, AraC family n=4 Tax=Burkholderiales RepID=B1Y6T0_LEPCP Length = 315 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 99/269 (36%), Gaps = 11/269 (4%) Query: 22 VADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN- 80 + +P + H HD EL ++ +G + D + G L H++ S++ Sbjct: 43 LEHGFPTPLARWHYHDEYELHLITSTSGKVFVGDWIGQFQPGQLVLTGPRLPHNWVSMDV 102 Query: 81 -----DLVLQNIIYCPERL---KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQ 132 L I + E L + + A G AQA + Sbjct: 103 PEGGVPLRDLVIQFPHEPLVRAAETIPELAELLPLLERARHGIEFFGISDRAQAHWQRVK 162 Query: 133 LEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSP 192 + F + +L LL+ + S+ S +D ++ RL +L P Sbjct: 163 ASRGLRRFTEFCTFLCDLSACTDYRLLSNVQL--QSVDDDHSLDQIDAVVMRLTDNLAQP 220 Query: 193 FALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECG 252 + E SE + FR+ TG T ++ +VR+ A LL S LI+ I E G Sbjct: 221 ISAADVAAELGMSESRFSRFFRRATGNTFTDFVNRVRINRACQLLMESDRLITHICYEVG 280 Query: 253 FEDSNYFSVVFTRETGMTPSQWRHLNSQK 281 F + F+ F GMTPS++R + Sbjct: 281 FNNVANFNRRFLEIKGMTPSEFRKQADNR 309 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 105/272 (38%), Gaps = 17/272 (6%) Query: 18 QAVAVADRYPQDVF--AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 Q + VA+ Y +V H HDF E+ I++ G ++ + + +GD+ + KH Sbjct: 12 QILYVANCYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHY 71 Query: 76 YASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEH 135 + + + L + P A + + + Q+ Sbjct: 72 DITEPGMTNAQLHIGFRNFTLEGYSRNTFPFKKAFLRK------KEEDSAILSISKQIIE 125 Query: 136 ESSQHVPFANEMAELLFGQLVMLLNRHRYTSD--------SLPPTSSETLLDKLITRLAA 187 E P + + + QL++ + R S + L++++I + Sbjct: 126 EKDAEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEK 185 Query: 188 SLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDI 247 +L S + + F+++TG + YL ++R+ A+ LL++ + + Sbjct: 186 HHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQA 245 Query: 248 STECGFEDSNYFSVVFTRETGMTPSQ-WRHLN 278 + G+ D+ YFS +F + G PS+ WR + Sbjct: 246 ANMVGYNDAYYFSKLFKKYYGFPPSENWRKSS 277 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 15/286 (5%) Query: 5 LKLLKDDFFASDQQAVAVA-DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 +K + F + + + + H H EL ++ + G+ + + G Sbjct: 1 MKAQFEAFQPLPESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAG 60 Query: 64 DLFYIHADDKHSYASVNDLVL----QNIIYCPERLKLNLDWQGAIPGFNASAG--QPHWR 117 DL + + H + + D V + + E + R Sbjct: 61 DLVLLGPNLPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVR 120 Query: 118 LGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPT----S 173 A+ ++ + PF M L +L+ + + Sbjct: 121 FNQEVSARVLPMLAAMLD----MQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYE 176 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 ++ + + L SE + F + + +L + R+ A Sbjct: 177 DNQRINTVYNYIREHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMA 236 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +L + + +++IS CG+E +F F + G+TP+ +R+ Sbjct: 237 SKMLIETDMQVAEISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 103/252 (40%), Gaps = 6/252 (2%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H H E + + GN + + + + G+ I++ H S +D ++ N ++ P Sbjct: 46 WHWHSELEFIYIESGNVVFDIGTVHFELNEGNGIMINSKILHRLQSSSDAIIPNFLFQPS 105 Query: 93 RL--KLNLDWQGAI-PGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 + + +L ++ I P ++S ++ +A ++I + + + Sbjct: 106 FIAPQDSLIYKKYINPVISSSLEYLVFQPDIPWQKKALEIIKTII-AVQETEFNREIIVS 164 Query: 150 LLFGQLVMLLNRHRYTS--DSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 + QL +LL + +++ S T L ++ + A L+ A+ S+ Sbjct: 165 MSVQQLWILLLENLTFDQFENMGAVISRTRLQLMMQYVHAHYSENITLEDIARTANISKS 224 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 F+ +T +YL R+ A LL ++ I+ IS GF + ++F F + Sbjct: 225 TALHLFQNNLKLTPVKYLINYRLTQAALLLINTEEKIATISNNTGFNNVDHFCRTFKKTY 284 Query: 268 GMTPSQWRHLNS 279 MTP+ +R+ Sbjct: 285 KMTPTDYRNQER 296 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 13/260 (5%) Query: 32 AEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS-YASVNDLVLQNIIYC 90 H HD+ E++ V+RG ++V D R+ +GD+ ++ + H+ Y +D ++ NI Sbjct: 73 YMHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFIS 132 Query: 91 PERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQ---------VIGQLEHESSQHV 141 ++ + S + S + ++ E + Sbjct: 133 NPMIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLNFTDNSPDSILLTEKMIEEYIEQR 192 Query: 142 PFANEMAELLFGQLVMLLNRHRYTSDSLP--PTSSETLLDKLITRLAASLKSPFALDKFC 199 PF M + L L+R Y + S+ P + TL +I + + +S LD Sbjct: 193 PFYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRS-ITLDSLA 251 Query: 200 DEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYF 259 + L + RQ TG T +Q + Q ++ A + + + I DI GF D ++F Sbjct: 252 KHFQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVSHF 311 Query: 260 SVVFTRETGMTPSQWRHLNS 279 F +E +TP+++R S Sbjct: 312 IRSFKKEYHLTPAEYRKTFS 331 >UniRef50_C6DJR4 HTH-type transcriptional activator rhaS n=40 Tax=Enterobacteriaceae RepID=RHAS_PECCP Length = 279 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 131/272 (48%), Gaps = 3/272 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L DDFF S VAV R PQ F EH HDF E+V+V +G G+HV ND+PY + G +F Sbjct: 4 LRGDDFFTSRAVTVAVEPRTPQTAFPEHYHDFWEIVLVEQGAGVHVFNDQPYALCSGSVF 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ +D+H + V L L N++Y P + D +P Q W++ + GM Q Sbjct: 64 FVRDNDRHLFEDVEGLCLTNMLYRSPRGFRFLSDIAAFLPYGPNGEWQGQWQVNAAGMQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 +Q + L + P A +E LF +++ L + + + S + L+ L Sbjct: 124 LKQSLNSLAELAQSDAPEAIAASESLFLHILVQLRQQCFQTQSSGSERQG--VQALLGWL 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + D S R L +Q +Q TGMT +YL ++R+ A+ LQ S I+ Sbjct: 182 QNNYSEEVNWGSLADRFSLPLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+ CGF DSN+FS F + P RH Sbjct: 242 TIAHACGFSDSNHFSTQFRKAFSQAPKSLRHQ 273 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 111/301 (36%), Gaps = 40/301 (13%) Query: 18 QAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYA 77 A+ + + H H+ E + +G+ +N + Y++ IH ++ H+ Sbjct: 24 VALYEWNGENEWHVVPHWHEEMEWIYFQKGDFPVWINTKEYQVHAPAFMCIHPEELHALI 83 Query: 78 SVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG-------------SMGMA 124 D + +++ + L + R+ S Sbjct: 84 LEKDGIESAVVFPVDILCFERYDAAEAKVL-GPLAEGKLRMPVLCQSGDAAFEELSACYK 142 Query: 125 QARQVIGQLEHESSQHVPFAN----------------------EMAELLFGQLVMLLNRH 162 + QV+ Q++ ++ V + + +L+ + ++ Sbjct: 143 EIEQVLRQMKEHDTKKVQHLDSSITRENVAGEPKQNLQKNMLYLNIKAKMLELIAVAYKY 202 Query: 163 ----RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTG 218 R + + + L K++ + SP L + + + +E+ + F++ G Sbjct: 203 DLFTRQVREDREESGTVENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIG 262 Query: 219 MTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 TI +Y+ +RV A L + I DI++ CGF++ YF F +E GMTPS++R + Sbjct: 263 KTITEYINVIRVEKAATALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKKS 322 Query: 279 S 279 Sbjct: 323 K 323 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 9/272 (3%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 Y + H H EL++V G + + + I + +I++ Sbjct: 23 FPIAAEFQKLSYYAYGLCISHWHPEMELLVVTEGALEQRIGEETHMIRENEGVFINSHVM 82 Query: 74 H--SYASVNDLVLQNIIYCPERLKL---NLDWQGAIPGFNASAGQPHWRLGSMGMAQ--A 126 H + D + I + P L +L ++ + + + + + Q Sbjct: 83 HGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKYVKTLQSQKDLLYRIVRPEDIQQRRM 142 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLN-RHRYTSDSLPP-TSSETLLDKLITR 184 +I ++ + + + +L LL R + ++ + + Sbjct: 143 IDLIYKITDTYVKREVCYELKVQQMMLELWELLYKRTGHVEENAIQMNRELYKIQDALAY 202 Query: 185 LAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLI 244 + K+P L+ S+ + F++ + +Y+ R+ + L+ R I Sbjct: 203 IQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVFRQSPMEYVTSYRIQQSFMLIADDRYSI 262 Query: 245 SDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 ++I+ E GF +S+YF+ +F + GMTP+Q++ Sbjct: 263 TEIAYESGFTNSSYFTEMFRKVIGMTPTQYKK 294 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 104/269 (38%), Gaps = 6/269 (2%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 Q V + D H H++ E+++V +G ++D + + GD+ + + H Sbjct: 15 PFQLVHNKTKSCDDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHC 74 Query: 76 YASVNDLVLQ--NIIYCPERL----KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQV 129 + + +CP L D ++ + Q + + A + Sbjct: 75 SLLDKGKTVTTSALYFCPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGL 134 Query: 130 IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASL 189 ++ E++ ++ E LL ++ ++R+ T+ + + + + A L Sbjct: 135 FDEIAKETAIADLYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYIDAHL 194 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 L A ++F+ G+T ++L+ R+ A+ LL+ + L I I+ Sbjct: 195 HEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAE 254 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 CG+ +F F TG TP+ +R + Sbjct: 255 ACGYHSMPHFYRTFRAATGTTPAAYRKNS 283 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 11/260 (4%) Query: 28 QDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQ-N 86 H H+ E++ G+ + + R L + + HS S + L + Sbjct: 26 NTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLC 85 Query: 87 IIYCPERLKLNLDWQGAIP------GFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQH 140 I ++L + + S P+ L + R + + Sbjct: 86 IHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVEN----KNTS 141 Query: 141 VPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 ++ A L+ L+ + + + S +L K+I+ + +L++ + Sbjct: 142 AMRSDGTALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVAN 201 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 + S + F+Q G+T +YL +VR+ HA +L ++ IS++ E GF + F+ Sbjct: 202 QVGFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFN 261 Query: 261 VVFTRETGMTPSQWRHLNSQ 280 +F GMTP Q R+ ++ Sbjct: 262 RLFKEIYGMTPRQARNSYAE 281 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 96/256 (37%), Gaps = 8/256 (3%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H H E + G L ++ + +G +I++ H + + + NI++ P Sbjct: 47 WHWHHELEFLYTAEGTALCLIGTSKIELHKGCGIFINSGVLHRFEAQSSTFAPNIVFSPT 106 Query: 93 RL---KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 L + + +P ++S + + Q Q++ Q+ + P Sbjct: 107 LLAPENSLIYEKYILPVISSSVPYQVFSPSNTFGKQVLQLLSQICTI-QETKPDNELCTI 165 Query: 150 LLFGQLVMLLNRH----RYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCS 205 L QL +L ++ ++ + L ++ + L+ AS S Sbjct: 166 QLLFQLWNILQKNMDWTSDSNSIHRLNHKQARLQAMMQYIHDHYMEEITLETIAASASIS 225 Query: 206 ERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTR 265 + F+ + YL Q R+ A L ++ +S I+ E GF S YF F + Sbjct: 226 KSGALHIFQTGIHCSPVAYLIQYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQ 285 Query: 266 ETGMTPSQWRHLNSQK 281 M+P+++R +++ Sbjct: 286 YYHMSPNEYRKRKTEE 301 >UniRef50_C6C3E6 Transcriptional regulator, AraC family n=8 Tax=Enterobacteriaceae RepID=C6C3E6_DICDC Length = 281 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 3/277 (1%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 L D+FF S VAV R PQ F EH HDF E+V+V +G G+HV ND+PY + G +F Sbjct: 4 LHGDEFFVSQATTVAVEPRMPQSAFPEHYHDFWEIVVVDQGAGVHVFNDQPYVLCSGAVF 63 Query: 67 YIHADDKHSYASVNDLVLQNIIY-CPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQ 125 ++ +D+H + V +L L N++Y P + D +P W++ + Q Sbjct: 64 FVRDNDRHLFEQVEELHLTNVLYRSPRGFRFLSDIAPFLPYGPNGEWLGQWQVNNGTRQQ 123 Query: 126 ARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRL 185 +Q+I QL ++ P +E LF Q+++LL + + + S + + L+ L Sbjct: 124 VKQLILQLAGQARSERPEDIATSESLFLQILVLLRQKGFRTQSDGSAAQG--IQALLGWL 181 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + D + S S R + +Q +Q TGMT +YL ++R+ A+ LQ S I+ Sbjct: 182 QNNFCEEVNWDALAERFSLSLRTMHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSIT 241 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 I+ +CGF DSN+FS F + + P RH ++ Sbjct: 242 TIAHDCGFSDSNHFSTQFRKAFSLAPKSLRHRAQHEE 278 >UniRef50_C6BWQ4 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWQ4_DESAD Length = 296 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 4/252 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+F + V G+G V++ Y I G L+++ H + N + +++ + Sbjct: 40 HLHEFYVVHYVSAGSGSCVIDFETYDIIPGSLYFVSPGQLHLWNPENIVDGFVMVFTDDF 99 Query: 94 LKLN---LDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAEL 150 LK + + FN+ P + L + A+ V+ L E S P + Sbjct: 100 LKSPEAPIHSAYELEFFNSVINSPMFMLSTDQKAELGSVMSSLCREFSSKKPGFETVLRS 159 Query: 151 LFGQLVMLLNRHRYTSDSLPPTS-SETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 F L++ L R P ++ + ++A + + + + S L Sbjct: 160 YFHILMVCLQRMFADRMQRPGARVENPMVREFKKLVSAHHSPQLRVQDYAERMNVSVSRL 219 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 ++ T MT Q +R + A+ +L +S +S+I E FED +YF F RETG Sbjct: 220 SAVIKEVTSMTPGQIVRNELINTAKRMLANSDKNVSEICYELKFEDPSYFGRFFKRETGF 279 Query: 270 TPSQWRHLNSQK 281 TPS +R K Sbjct: 280 TPSVFREHVRGK 291 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 100/272 (36%), Gaps = 10/272 (3%) Query: 16 DQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHS 75 + V + PQ H HD ELV V++G G + ++ GDLF I + HS Sbjct: 15 PMEMVYRTKKSPQLELPHHLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIHS 74 Query: 76 YASVNDLVLQN--IIYCPERLKLNLDWQGAIPGFNASA-----GQPHWRLGSMGMAQARQ 128 D + + + + P + + G +L A Sbjct: 75 SFPDPDQPIVSSALFFAPSLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQAYIED 134 Query: 129 VIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSE---TLLDKLITRL 185 ++ + E E L L++ +NR+ T + S+ L I + Sbjct: 135 MLKGISEEIRLAQLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSIQWI 194 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 L P L +A+ + F++ TG+ + Y+ R+ A+ LL++ + Sbjct: 195 HEHLDQPIGLAALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASVG 254 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 I+ CG+ +F F + TGMTP +R Sbjct: 255 QIAEICGYATLTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2W7_EUBE2 Length = 273 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 9/273 (3%) Query: 10 DDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 +D F +D V + + H H+ EL+ ++ G+ + D Y + G L I Sbjct: 6 NDNFLTDIATVPPSYKMKHF----HEHNKWELMFIYSGSCTLYVGDEIYMLNPGGLALIS 61 Query: 70 ADDKH--SYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQAR 127 D H +Y + +D + + + LK D ++ + P + + Sbjct: 62 PDTAHMTTYLAGSDHTRYVLYFNNDELKWIADD-SSLDIESIFHEHPVIHIPERRLDYIS 120 Query: 128 QVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSS--ETLLDKLITRL 185 +I ++ +E + + F +L++ + R + D++ L+ K+I + Sbjct: 121 SIIQKISYEHNGVDSLSLSFIHSYFHELILFILRCQMYEDNVITKMDTGNELIQKVIEYI 180 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + + + + + SE L ++F+ TG +YL VR A LL ++ L I+ Sbjct: 181 IENYHNDITMAATAELFNMSESSLSKKFKAFTGFRFREYLINVRTHAAADLLVNTSLSIT 240 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 +I+ +CGF DSN F + G P +R + Sbjct: 241 EIADKCGFADSNTMGGTFKKIMGEAPGSYRKSH 273 >UniRef50_A4WEG5 Transcriptional regulator, AraC family n=5 Tax=Enterobacteriaceae RepID=A4WEG5_ENT38 Length = 279 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 105/281 (37%), Gaps = 8/281 (2%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M K + + V+ + + V H H E++ V G G+ ++++R Y + Sbjct: 1 MREMPKSDHLELITLNDTIVSFSRLFANTVRYHHWHQCLEILYVEEGFGVAIVDNRHYTM 60 Query: 61 TRGDLFYIHADDKHSYASVN--DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRL 118 G LF+ H + + + I + L P + R Sbjct: 61 RPGRLFFFPPFTLHKVMVDEQAEAIYRRTIIHLDH-HAVLKVLRDFPQTQQRLQKLSRRG 119 Query: 119 GSMGMAQARQVIGQLEHESSQ-HVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETL 177 G +A + H S H P +E L L +L P SS + Sbjct: 120 GEAWVADMADCHPHIHHLFSGYHPPLTSESVASLIISLFAML----PDDKDGAPGSSHGI 175 Query: 178 LDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLL 237 +++ L + F+LD E S + ++F +TG I+ YL +R+ A L Sbjct: 176 ASQVMFWLDEHYQQKFSLDALAGELGKSRSYVSRKFHAETGEKIHDYLNTLRLRKACECL 235 Query: 238 QHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 HS + DI+T GF D YF F + G TP Q+R + Sbjct: 236 LHSNESVRDIATRVGFSDVTYFISAFKKGIGETPLQYRKNH 276 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 11/248 (4%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H+H F E+ + G G ++ + ++ L I A H+ S + L + E Sbjct: 36 PHSHHFTEIFFIKDGTGRMLIENESLPVSSNSLVVIGAQVTHTEFSDPENPLDYYVLGVE 95 Query: 93 RLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLF 152 LKLN D + ASA P RQ + E E+ + Sbjct: 96 GLKLNTDKEPEYIHVPASANSPF----------IRQCFENILREMHNKQDRYAEICQHYL 145 Query: 153 GQLVMLLNRHRYTSDSLPPTSSETL-LDKLITRLAASLKSPFALDKFCDEASCSERVLRQ 211 L++ R + S + + + K+ + + +S +LD + S S+ L Sbjct: 146 DILILYFCRKDHVSYEVVDAQNSSRECHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSH 205 Query: 212 QFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTP 271 +F + G + YL +VR+ A+ LL + I +I+ GF ++YFS F + +P Sbjct: 206 RFAELYGKSPIAYLNEVRLASARDLLLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESP 265 Query: 272 SQWRHLNS 279 Q+R + Sbjct: 266 QQFRKSHR 273 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 8/258 (3%) Query: 25 RYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH-SYASVNDLV 83 R +++ H H + EL + G LH ++D+ YR G++ H SYA D Sbjct: 21 RSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMHHSYAPSEDQA 80 Query: 84 LQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPF 143 Q I+ + + I + G + Q ++G + E S+ Sbjct: 81 FQRIVVY--FTEKAIGDLTLIEKMRHAGGL--YHPDRRMSHQIHGLLGMMLMEQSETDDL 136 Query: 144 ANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEAS 203 + E + +++L +L PT +++ + K+I ++ LD+ Sbjct: 137 HDITMETILRAILLL---LLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLDELAGRFY 193 Query: 204 CSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVF 263 S+ L ++F++ T TINQY+ R+ +AQ + + S ++ CGF S +FS VF Sbjct: 194 VSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFSRVF 253 Query: 264 TRETGMTPSQWRHLNSQK 281 TGMTP+ +R SQ+ Sbjct: 254 RSVTGMTPTAFRKSCSQR 271 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 5/252 (1%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY---ASVNDLVLQNIIY 89 H H EL+ V +G+G + + GDL I ++ H S ++ I + Sbjct: 56 WHYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNESTHNEYEMVIQF 115 Query: 90 CPERLKLNLDWQGAIPGFNASAGQPH--WRLGSMGMAQARQVIGQLEHESSQHVPFANEM 147 P+ L + + +A + G + + I ++ SS Sbjct: 116 KPDFLGEPIWDIPEMQRISALLEKSKAGIVFGEEVKKRIGKEITEMHETSSLDKLCRFLK 175 Query: 148 AELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSER 207 + ++ + + K L++ D A+ Sbjct: 176 ILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKDHFKEAITLEEVADLANMKVP 235 Query: 208 VLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRET 267 + F++ T T Q++ + R+ HA LL L I+++ E GF + +YF+ F Sbjct: 236 SFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNFSYFNRTFKEYI 295 Query: 268 GMTPSQWRHLNS 279 +PSQ+R + Sbjct: 296 QKSPSQYRKEFN 307 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 102/260 (39%), Gaps = 12/260 (4%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY--ASVNDLVLQNIIYC 90 H HD EL+ + G ++ +P+ + +GDL I++++ H+ S + I Sbjct: 38 PHFHDAIELLYSFSGRARVFVSGQPFLMEKGDLVIINSNEVHAIWGESGEKVEYLVIKLD 97 Query: 91 PERLKL---NLDWQGAIPGFNASAGQPHWRLGSMGMAQ--ARQVIGQLEHESSQHVPFAN 145 PE L ++ + F S P L S MA I ++ E S + Sbjct: 98 PEVLYSTSRSIFESKYVFPFTMSKSSPQTLLKSGEMASTVIPATIAKINDEFSHKDYGYD 157 Query: 146 EMAELLFGQLVMLLNRHRYTS-----DSLPPTSSETLLDKLITRLAASLKSPFALDKFCD 200 + + + + RH S S L+ ++ L + + + Sbjct: 158 FAIRIHICTIFLAVLRHWRQSGISVGTESINDSDFQLMRQVFQLLESHYATALTAKQAAA 217 Query: 201 EASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFS 260 + S ++ + TG + + L +R+ A+ LL + L I++++ G+ ++YF Sbjct: 218 TCNLSYSYFSRKIKSITGRSFTELLNYIRITEAEKLLTTTDLSITEVAVSVGYSSTSYFI 277 Query: 261 VVFTRETGMTPSQWRHLNSQ 280 F + ++P +++ Q Sbjct: 278 QHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 10/262 (3%) Query: 20 VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASV 79 +A + HTH F EL+ V G G N + RGDL I +H+ S Sbjct: 23 IAFSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSS 82 Query: 80 NDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQ 139 + L+ + + + + ++ Q+ +E Sbjct: 83 QNHPLEYYVLGIDGISFLSQKDRECAQVFCNF---------EHDPSIHELFRQMLYEIRT 133 Query: 140 HVPFANEMAELLFGQLVMLLNR-HRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKF 198 + + + L L++ + R + S+ ++ L ++ LD Sbjct: 134 AQYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTL 193 Query: 199 CDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNY 258 ++ + F + G++ QYL Q R+ AQ+LL+++ ISDI++ GF +Y Sbjct: 194 TGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSY 253 Query: 259 FSVVFTRETGMTPSQWRHLNSQ 280 F+ +F + MTP ++R +++ Sbjct: 254 FTQIFRKNFNMTPVKYRQEHAK 275 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 101/282 (35%), Gaps = 18/282 (6%) Query: 13 FASDQQAVAVADRYPQDVFAE-------HTHDFCELVIVWRGNGLHVLNDRPYRITRGDL 65 + V++ D+F H HD + V +G + R Y + G+ Sbjct: 29 YNDCAFPVSMHTITKYDIFPNGRGFHDVHWHDEIQFTYVSKGELTMQVEGREYVLKEGEA 88 Query: 66 FYIHADDKH-SYASVNDLVLQNIIYCPERLKLN----LDWQGAIPGFNASAGQ-PHWRLG 119 +I++ H + + D + ++ + L ++ +P ++ Sbjct: 89 LFINSGLIHVTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRE 148 Query: 120 SMGMAQARQVIGQLEHESSQHV--PFANEMAELLFGQLVMLLNRHRYTSDSLPPT---SS 174 S + I L + + + + + R+ + P Sbjct: 149 SAEDEKILSDIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSDTMQKMPACYLQR 208 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + + K++ + L + + AS S R+ F+ T YL RV Sbjct: 209 QERMKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGM 268 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 LL+ + L I+DI+ GF DS+YF F ++ GMTP Q+R+ Sbjct: 269 ELLRTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRN 310 >UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWD2_9FIRM Length = 298 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 108/281 (38%), Gaps = 21/281 (7%) Query: 4 QLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRG 63 + + DD ++ + + V H H+ E+ ++ G + + + YR+ G Sbjct: 24 PMTVNHDDLWSFEGKNV-----------PIHWHNDLEINLIREGEAVFQVYQKSYRVRTG 72 Query: 64 DLFYIHADDKHSYASVNDLVLQN--IIYCPERLKLNLD---WQGAIPGFNASAGQPHWRL 118 + F ++ + HS +S + ++ I+ P+ L + + F ++ P L Sbjct: 73 EGFLLNRNVPHSCSSPGNEHVRYSTILVRPDFLYGDFGSDVERKCFQPFLQNSAIPCIYL 132 Query: 119 G--SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLN---RHRYTSDSLPPTS 173 + Q + Q+E + + L + ++ R T Sbjct: 133 TGFDENGKEILQKLNQVEEAFDRKRFCYELKIKGLLCEAFAMILYGHRQELTKFVPANLQ 192 Query: 174 SETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHA 233 L+K++ L +L D+ S V + F++ TG TI YL + RV + Sbjct: 193 ELERLEKMLNYLNMHFTEVISLQDLADQVHLSREVCCRLFKKMTGKTITGYLEEYRVNKS 252 Query: 234 QYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 L+Q + ++ I+ GF + + F+ F + G P ++ Sbjct: 253 FSLVQSGQYSMTQITEMVGFSNPSRFASAFRKRFGCNPGEY 293 >UniRef50_C7PEC1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC1_CHIPD Length = 290 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 107/274 (39%), Gaps = 7/274 (2%) Query: 13 FASDQQAVAVADRY---PQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIH 69 + D ++ Y +++ H H+F + + G G H ++ + + + ++++ Sbjct: 17 YKHDDIQISRFAPYLSVHENLRDAHKHNFYHVTLFTEGAGTHTIDFKTFTVKPYQIYFMI 76 Query: 70 ADDKHSYASVNDLVLQNIIYCPERLKLNL---DWQGAIPGFNASAGQPHWRLGSMGMAQA 126 HS+ + I + L+ L D+ P F + L Sbjct: 77 PGQVHSWQFEGKVDGYIINFSFNFLQSLLQKPDYLEQFPFFTGDVDEAVINLPEQLHTPI 136 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSET-LLDKLITRL 185 ++ +L E Q + +M ++L Q +L+ R + +P + LL + Sbjct: 137 TRIFEELIREIEQPADMSVDMIQVLMLQAFILIGRLSFEKSPVPSNNYNYILLKNFQKLI 196 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 + + ++ + + L GM+ + +R + A+ LL + I+ Sbjct: 197 EKNYTTLKLPREYAELLFITPNHLNALCNSTVGMSAGELIRNRIILEAKRLLVNKDSTIT 256 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 +I+ + GF D++YF+ + + TG TP ++R Sbjct: 257 EIAYQLGFADNSYFTKFYKKYTGQTPEEFRKSLR 290 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 94/277 (33%), Gaps = 11/277 (3%) Query: 14 ASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDK 73 + ++ H HD+ E + V GN N + +GDL + A Sbjct: 17 FRPKIMAYYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVP 76 Query: 74 HS--YASVNDLVLQNIIYCPERLKLNLDWQGAI--------PGFNASAGQPHWRLGSMGM 123 H S + + N+ + + + R Sbjct: 77 HRLIVESGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQ 136 Query: 124 AQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-RYTSDSLPPTSSETLLDKLI 182 R ++ +L+ M LL QL++ + R + + + + Sbjct: 137 VNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQAT 196 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + + + L++ F+ TIN+YL +R+ A+ LL + + Sbjct: 197 EYIHQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDV 256 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 I +++ G YFS++F + TG++P+++R + Sbjct: 257 PIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRKSKN 293 >UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL40_BACSK Length = 323 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 107/277 (38%), Gaps = 12/277 (4%) Query: 13 FASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD 72 F + + + F H HD+ E+ V+ G+ + DR + +G+L ++ Sbjct: 42 FLAPGTEIMIRKHTRFIDFPPHRHDYIEMNYVYNGSLKQTIGDRAVELQKGELVVLNQHI 101 Query: 73 KHSYASVN-DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP---------HWRLGSMG 122 +H + + ++ N I P + F + Sbjct: 102 EHEIEACGTEDIIINFIIQPSFFNYIFSFLNVEGPFYSFLIDSIHGSEPLGQFLYFKCAK 161 Query: 123 MAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTS-SETLLDKL 181 A +Q++ ++ E + ++ +L G L++ L + T D S + + Sbjct: 162 EASVQQLLRKMVEEMMEPDAYSQASIKLYVGMLMIELAKKANTLDGKQKLSLHNQWIRQT 221 Query: 182 ITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSR 241 + K +L + + +L + ++QTG T L++ R+ A+ LL S Sbjct: 222 FAYIDEQYKHA-SLYELAKRLNQPHYLLSKVIKKQTGKTFKALLQERRLDIAKELLVQSD 280 Query: 242 LLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLN 278 L +S I+ E G+++ +YF +F + TP +R + Sbjct: 281 LPVSVIAQEIGYDNFSYFYQIFKKHFHTTPLVYRKKH 317 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 99/293 (33%), Gaps = 24/293 (8%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVI-VWRGNGLHVLNDRPYR 59 M L + + + + + + H H E+++ V G +++ + Y Sbjct: 1 MIEILNGMTETINYRNSMDFRLFHNVDYEDYPTHWHVGIEILMPVTEIYG-VIVDQKKYV 59 Query: 60 ITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLG 119 + GD+ +++ H+ + + + P L + + + F P + + Sbjct: 60 LQEGDILIVNSGVPHALEAPPTGERIILQFDPALLYSLKEMETLLLLF-----PPVFYIT 114 Query: 120 SMGMAQARQV----IGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYT---------- 165 + + ++ E FA + +L + R Sbjct: 115 PENEPDLYPLVKAKMEEIIREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHD 174 Query: 166 ---SDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTIN 222 S + + K + + L++ S+ + F++ MT Sbjct: 175 MRRSKQDRQWEYQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFY 234 Query: 223 QYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWR 275 +YL + RV A+ LL + + I+D++ GF + F F +PS++R Sbjct: 235 EYLNKKRVKCAEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 96/257 (37%), Gaps = 10/257 (3%) Query: 33 EHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPE 92 H H E++++ G +ND+P ++ +G++ I D H + Sbjct: 29 PHWHKEIEILLITEGVVNLFINDKPMQLKKGEIVIIKGGDIHYILPSPGSERLVFQFDIS 88 Query: 93 RLKLNL---DWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 + + + ++ +S + + ++ + +E + + + Sbjct: 89 FFNDLILLNEEKESLINLFSSIKKCSRDWSAKIRKSVFDILIDIYNEDLYKIEGYSYAIK 148 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSSE-------TLLDKLITRLAASLKSPFALDKFCDEA 202 L+ +L R E L+ + + + K P L+ E Sbjct: 149 GKMYNLIPILYRQIPREIEENTVEYEINSKEILERLNNIFKYVEKNYKQPIKLEDVSYEV 208 Query: 203 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 262 S + F++ TG T +L + R+ A+++L ++ + I D+ E GF + F V Sbjct: 209 GFSVYYFTKFFKKNTGKTFITFLNEYRLEKAKWILLNNNISIVDLVEEVGFGSTKTFYRV 268 Query: 263 FTRETGMTPSQWRHLNS 279 F + G++P +++ + Sbjct: 269 FKEKIGVSPLEFKKRYN 285 >UniRef50_A9KJU1 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJU1_CLOPH Length = 292 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 98/285 (34%), Gaps = 12/285 (4%) Query: 7 LLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLF 66 K D + +A RY H H F E++ + G + + + GD+ Sbjct: 5 FEKSDVLNAPVEAFYFDTRYDNFPIRPHWHYFMEIIYMLDGRAQINAGEESHLLFAGDMA 64 Query: 67 YIHADDKHSYAS--VNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQP-----HWRLG 119 H H+ + + + + RL+L + + SA + Sbjct: 65 IFHPKMVHAIYAVTSEPIHYAVLKFDINRLQLTSKYAPKMRILFQSAEGNPACPIYLSAN 124 Query: 120 SMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRH-----RYTSDSLPPTSS 174 S+ R I HE + + + + L+ + R TS LP Sbjct: 125 SLIHVDIRSQILPCIHEIKEKDYGYDVILQAKLYILLSEIIRIWRKNGFDTSKLLPSNDE 184 Query: 175 ETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQ 234 + + + A P + + + S + FR G T +L +RVC A+ Sbjct: 185 VDTIYTITEYMDAHCTEPIKVVDIAAKCNMSYSHFAKSFRAIYGQTCKDFLEYLRVCKAE 244 Query: 235 YLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 L + ++ IS E GF D ++ F G+TP Q+R + Sbjct: 245 NYLLFTEYDLTYISQETGFCDCSHLIKAFKDVKGITPKQYRLQHK 289 >UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XGU9_CALS8 Length = 304 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 104/301 (34%), Gaps = 24/301 (7%) Query: 1 MAHQLKLLKDDFFAS-DQQAVAVADRYPQDV--FAEHTHDFCELVIVWRGNGLHVLNDRP 57 M + L ++ F Q+ A + +D F H H+F E + V +G G +N Sbjct: 1 MPEKEPLYIEEIFDYVSQRPQKFALNFWEDPRYFKLHRHNFVEFMYVVKGEGTEHINSIS 60 Query: 58 YRITRGDLFYIHADDKHSYASVN--DLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQ-- 113 Y + G + H L + + E L I + + Sbjct: 61 YSLKPGTFSIVMPYQIHRIEYSEQNPLSIYVVAISFEELLAPSSIFYRIGQLLLNYDENV 120 Query: 114 -PHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-----D 167 P++ + + +Q +A + + ++V +R R + Sbjct: 121 LPYYYFEGKEKEMMDSLFEEAWIYFNQQDVWAEIILKAKILEIVAYFDRCRNLACEKNFQ 180 Query: 168 SLPPTSSETLLDK-----------LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQ 216 S K L+ + + L E S + Q F++ Sbjct: 181 SPASNFVTNRAQKESIPVPTDYWQLVYYVHKNYNQNIDLKTLSKEFHLSPSYISQLFKKL 240 Query: 217 TGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH 276 G + +L +VR+ HA LL + ++DI+ E GF+ + F+ VF + GM+ ++R Sbjct: 241 VGSNFHNFLIEVRLQHACSLLLSTDKPVTDIALEVGFDSYSTFARVFHKHKGMSALEFRK 300 Query: 277 L 277 Sbjct: 301 R 301 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 10/259 (3%) Query: 17 QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 Q + F H H + E+ V G+ +ND + G++ +D H++ Sbjct: 12 DQNFFSSKILENFSFPPHLHPYVEIAYVIEGSIEVTINDTQCCLKAGEVSICFPNDIHTF 71 Query: 77 ASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHE 136 S + I+ P+ + + + + ++ ++ L E Sbjct: 72 NSDGFSKIILFIFSPDLTRSFFGIR------MDKTLENPFMSKNIVDDGISSLLYMLHDE 125 Query: 137 SSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALD 196 + + L ++ L+ H S T + + L+ + +LD Sbjct: 126 Y--KSVNNKYVIKGLLYTILGKLDSHFTFKKS--STFYNSTMQNLLKYIEIHYHEKISLD 181 Query: 197 KFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDS 256 + S+ L + F + G N Y+ ++R+ AQ LL + L ++ I+ ECGFE Sbjct: 182 SIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIALECGFESQ 241 Query: 257 NYFSVVFTRETGMTPSQWR 275 F+ +F T +TP+++R Sbjct: 242 RNFNRIFKELTALTPTKFR 260 >UniRef50_D1PSQ0 AraC-type sugar metabolism regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSQ0_9FIRM Length = 275 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 8/265 (3%) Query: 17 QQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSY 76 + + H HDF E+ ++ RG +++ + YR+ GD + H Sbjct: 5 DYEIYRYRSTYMNEVELHHHDFYEVYLLLRGRVEYIVENHIYRMRPGDWMLTSPLELHQA 64 Query: 77 ASVND---LVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPH---WRLGSMGMAQARQVI 130 V D + L+ + ++ ++ H RL AQ R I Sbjct: 65 RIVTDVDAYERFVLWIARPYLEHLSTPRTSLTRCFDTSVANHTNLLRLPGAAGAQMRASI 124 Query: 131 GQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSETLLDKLITRLAASL 189 +L + ++ +A+ L++ LNR D+ P SS+ ++D ++ + Sbjct: 125 DRLCTLRTSKEYGSDLLAQGALVDLMIGLNRAAAERGDARPMGSSDQVVDAVLHYINEHY 184 Query: 190 KSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDIST 249 LD+ ++ S+ L ++F Q G T+++Y+ Q R+ +A+ LL + +++ Sbjct: 185 SETLTLDQLAEKFFISKYHLLRKFDAQVGTTVHRYILQKRLLNAKQLLA-GGVPPNEVCQ 243 Query: 250 ECGFEDSNYFSVVFTRETGMTPSQW 274 CGF D F F E TP Q+ Sbjct: 244 YCGFGDYANFYRAFKAEYNQTPRQY 268 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 8/248 (3%) Query: 36 HDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLK 95 HD EL+ V +GN + D + GDL I +H + V + + I+ Sbjct: 31 HDSYELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKAEFIVMGFYLKP 90 Query: 96 LNLDWQGAIPGFN------ASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 + A+ + P + + + + + E+ ++ + Sbjct: 91 ESKSKIEALKEIYGFLESLENISSPFYFIHIRKRSNVFFCLESILQEAKENKKGLLLYIK 150 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 + +L + + R + + + + + + + SE + Sbjct: 151 SI--ELFIYITREMNNLEIKKGFDYSKIAKFIKDYIDQNYMEDIKIGDIAKKLFMSESSI 208 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 + F+ Q G+ +YL R+ A+ L S L IS+I+ CGF F+ +F + TG Sbjct: 209 SRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCGFSSLQRFNDIFKKYTGC 268 Query: 270 TPSQWRHL 277 +P+ +R L Sbjct: 269 SPTHYRKL 276 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 113/286 (39%), Gaps = 12/286 (4%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGL-HVLNDRPYR 59 M ++ +L+K+D + + + H H+ E+ V G ++ Y Sbjct: 1 MEYKYELIKND--DNLPIKIIFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYT 58 Query: 60 ITRGDLFYIHADDKHSYASVNDLVLQNIIYCP--ERLKLNLDWQGAIPGFNASAGQPHWR 117 +GD+ I+++ HS++ V + + + E LK N I S Q Sbjct: 59 SEQGDIVLINSNAIHSFSVVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEH 118 Query: 118 LGSMGMAQARQVIGQLEHESSQ--HVPFANEMAELLFGQLVMLLNRHRYTSD----SLPP 171 + R+ + + S A+ L +L+ LL ++ S + Sbjct: 119 -KIKIFNELRENLDSIIRAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKT 177 Query: 172 TSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVC 231 L ++ + + ++D + + S L + F++ GMTI+ Y+ VR+ Sbjct: 178 KKYLDRLTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLE 237 Query: 232 HAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 + L ++ I++I+ E GF + F+ VF +TP+Q+R Sbjct: 238 KSYRDLMNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKK 283 >UniRef50_Q7MG26 AraC-type DNA-binding domain-containing protein n=4 Tax=Vibrio RepID=Q7MG26_VIBVY Length = 289 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 16/287 (5%) Query: 1 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI 60 M+ +L A D + F H HDF EL +V G G H++ Y + Sbjct: 1 MSITYQLQHH--LRYPHFKFAYVDGHHHSDFGLHKHDFSELFLVVSGKGNHLVASHVYPL 58 Query: 61 TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAG-------- 112 T GD+F I+ D +H++ V+ L + N+++ + G+ A Sbjct: 59 TAGDVFVINGDIEHAFQDVDRLEIINLMFEAGTPFFETPSLRKLSGYQAMFKVEPIARQT 118 Query: 113 ---QPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSL 169 + L Q+I + HE Q M L QLV+ L R Sbjct: 119 GEYRAKLTLNDEQQPLITQLIEAIRHEYQQGESGFETMLTSLMQQLVITLARMYQQQTHD 178 Query: 170 PPTSSETLLDKLITRLAASLKS-PFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQV 228 P ++ L + + + A S+R L + F+Q + N YLR++ Sbjct: 179 LPNTTLA-LSRALIFIEQHFADGEIHSGDVAQAAFVSQRQLERLFKQFLNTSPNLYLREM 237 Query: 229 RVCHAQYLLQHS-RLLISDISTECGFEDSNYFSVVFTRETGMTPSQW 274 ++ + + LL + + I ++ +CGF DSNYFS F ++ G++P Q+ Sbjct: 238 QLNYGRDLLNNEAGMSIQHVAEQCGFSDSNYFSKCFKQKFGLSPRQY 284 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 111/288 (38%), Gaps = 16/288 (5%) Query: 5 LKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGD 64 L FF DQ A A H HDF EL+ V++G+ ++V++ + +GD Sbjct: 48 YTLSNGSFFERDQLISANMHLNIPMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGD 107 Query: 65 LFYIHADDKHSY-ASVNDLVLQNIIYCPERLKLNL------------DWQGAIPGFNASA 111 L ++A H+ + NI+ PE + +I + S Sbjct: 108 LCIMNASAVHTLGKLGKQDTVYNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISR 167 Query: 112 GQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP 171 + A + +L E+ + N+ E+ L + L R Sbjct: 168 NFMTFHTQDFPSDDAETYVHRLIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNS 227 Query: 172 TSSE--TLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVR 229 + + + ++I ++ ++ + D S L ++ T T ++ L+ +R Sbjct: 228 SIELGMSNVSQIIAYISDHY-KDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIR 286 Query: 230 VCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 A+ LQ + I++I G+ + ++F F +E G+TP+Q+R Sbjct: 287 FTAAKEYLQKLDIPINEIVYMVGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 96/272 (35%), Gaps = 9/272 (3%) Query: 15 SDQQAVAVADRYPQDV---FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHAD 71 A Q + H HD E+ ++ G V D + G+ +I+ Sbjct: 23 HQFDFAAYDADMHQFISGCIPPHWHDELEVFVLLSGQVEVVTGDISCIVNAGEGCFINGG 82 Query: 72 DKHSYA--SVNDLVLQNIIYCPERL---KLNLDWQGAIPGFNASAGQPHWRLGSMGMAQA 126 H++ S+ + + ++ + ++ + F GM Sbjct: 83 VLHTFRALSLGECRYHSFVFESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEPF 142 Query: 127 RQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTS-DSLPPTSSETLLDKLITRL 185 + + + ++++ + ++ DS P +E + ++ + Sbjct: 143 FEEFDRCFDACAGEGYAYEFDIRDSLTRMILCIAQNMNAPGDSDMPHLAEVRIKDMLGWI 202 Query: 186 AASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLIS 245 +LK + A+ R ++ F Q +Y+++ R+ A LL+ + ++ Sbjct: 203 DRNLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQVT 262 Query: 246 DISTECGFEDSNYFSVVFTRETGMTPSQWRHL 277 DI+ ECGF +YF F G TP+ +R Sbjct: 263 DIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 92/263 (34%), Gaps = 8/263 (3%) Query: 24 DRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVN--D 81 RYP H HD E + + G + +N + + D ++ H +S+N D Sbjct: 37 SRYPDRKALCHWHDDLEFIRIVHGEMNYYINGKNLVLKEHDGIMVNTRQMHYGSSINQND 96 Query: 82 LVLQNIIYCPERLKLN-LDWQGAIPGFNASAGQPHWRLGS--MGMAQARQVIGQLEHESS 138 I+ P N L +Q + L S + ++ Sbjct: 97 CSFLCILVHPALFSSNRLIYQKYLLPLLEDRETEFVYLDSGRPDHGFILDCLMEMTQLKE 156 Query: 139 QHVPFANEMAELLFGQLVMLLNRHRYTSDSLPP--TSSETLLDK-LITRLAASLKSPFAL 195 LF + L R + P +T + K +++ + L Sbjct: 157 HGEYGYELEIIGLFYLIWRHLARQFKAGKTAAPGIEDMDTKVQKDMVSFIYQHYTEKLTL 216 Query: 196 DKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFED 255 Q F++ + +L R+ + +LL+ + I++I+TECGF Sbjct: 217 SAIAASGGVCRSKCCQIFKKYLCQSPIDFLNSYRLEVSSHLLKKTDKSITEIATECGFNH 276 Query: 256 SNYFSVVFTRETGMTPSQWRHLN 278 +Y+S +F R G TP Q+R + Sbjct: 277 LSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 4/250 (1%) Query: 34 HTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPER 93 H H+ + + V G D ++ G +I+ + HS D ++ I+ Sbjct: 44 HWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDCHYKSFIFPDYF 103 Query: 94 LKLNL--DWQGAIPGFNASAGQPHWRL--GSMGMAQARQVIGQLEHESSQHVPFANEMAE 149 L+ + + + P R G ++ +L F Sbjct: 104 LRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYVYEVL 163 Query: 150 LLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVL 209 + L + + ++ + + + + +LD + S+ Sbjct: 164 VFLTSLWLEIRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGNVSKSEC 223 Query: 210 RQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGM 269 + FR T +YL + R+ A LLQ + + +I++ GF ++YF F +TG Sbjct: 224 LRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCFREKTGF 283 Query: 270 TPSQWRHLNS 279 +P +R N Sbjct: 284 SPRDYRGKNQ 293 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 106/280 (37%), Gaps = 20/280 (7%) Query: 16 DQQAVAV-ADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKH 74 D ++ + D P H H +L ++ +G G ++ D+ R D+ + A+ H Sbjct: 12 DDRSFRIDQDNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPH 71 Query: 75 SYASVNDL---------VLQNIIYCPERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGM 123 S D ++++ PE L+ + Q RL Sbjct: 72 VLRSDTDYYQPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCGTE 131 Query: 124 AQARQVIGQLEHESSQHVPFANEM-AELLFGQLVMLLNRHRYTSDSLPPTS---SETLLD 179 Q++ + + PF + + L R ++ + + L+ Sbjct: 132 NALTQLLEDI----PEKRPFEQLLGLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLE 187 Query: 180 KLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQH 239 ++ + + SP +LD + A+ + + FRQ T T +Q L +VR+ HA L+ Sbjct: 188 QVFSYILQRYASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRE 247 Query: 240 SRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNS 279 S+ IS I+ CG+ + + F+ F GM P ++ Sbjct: 248 SQENISQIALNCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_C6I5T7 AraC family transcriptional regulator n=18 Tax=root RepID=C6I5T7_9BACE Length = 297 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 11/280 (3%) Query: 14 ASDQQAVAVADRY-PQDVFAEHTHDFCELVIVWRGNG-LHVLNDRPYRITRGDLFYIHAD 71 SD+ +A+RY + + H H EL + G ++ D I+ DL I Sbjct: 15 LSDKDCFYIAERYKTEFTYPIHNHAEFELNFTEKAAGVRRIVGDSAEVISDYDLVLITGK 74 Query: 72 DK-HSYASVN----DLVLQNIIYCPERLKLNLDWQGAIPGFNASAG--QPHWRLGSMGMA 124 D H + + ++ I + + + + Q + Sbjct: 75 DLEHVWEQHDCHSKEIREITIQFSSDLFFKSFINKNQFDSIRDMLEKAQKGLCFPMSAIL 134 Query: 125 QARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSD--SLPPTSSETLLDKLI 182 + ++ L E + L L R +S + S + K+ Sbjct: 135 KIYPLLDTLASEKQGFYAVIKFLTILYELSLFNEEARTLSSSSFAKIGIHSDSRRVQKVQ 194 Query: 183 TRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRL 242 + A + L++ D + + F+ +TG ++ Y+ +R+ A LL S + Sbjct: 195 EYINAHYQEEIRLNQLADMVGMTPVSFSRFFKLRTGKNLSDYIIDIRLGFAARLLVDSTM 254 Query: 243 LISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD 282 I++I ECGF + + F+ +F ++ +P ++R +K Sbjct: 255 SIAEICYECGFNNLSNFNRIFKKKKECSPKEFRENYRKKK 294 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.179 0.575 Lambda K H 0.267 0.0546 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,168,832,683 Number of Sequences: 3077464 Number of extensions: 135098640 Number of successful extensions: 399793 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 20742 Number of HSP's successfully gapped in prelim test: 2831 Number of HSP's that attempted gapping in prelim test: 339115 Number of HSP's gapped (non-prelim): 30652 length of query: 282 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 155 effective length of database: 649,558,428 effective search space: 100681556340 effective search space used: 100681556340 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.0 bits)