Job Description P11446 Confidence 96.13% Date Thu Jan 5 11:32:37 GMT 2012 Rank 438 Aligned Residues 86 % Identity 15% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T
Query Conservation
Alig confidence											.																											.										.	.	.	.	.																.
Template Conservation											.																											.										.	.	.	.	.																.
Template Sequence		V	N	K	I	T	V	V	G	G	.	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	I	A	D	R	L	V	L	L	D	L	S	.	E	G	T	K	G	A	T	M	D	.	.	.	.	.	L	E	I	F	N	L	P	N	V	E	I	S	K	D	L	.	S	A	S	A	H	S	K	V	V	I	F	T	V
Template Known Secondary structure											.	S														T			S								S	.		G	G	G		T	T			.	.	.	.	.					T		T	T					S		G	.	G	G	G	T	T		S
Template Predicted Secondary structure											.																											.										.	.	.	.	.																.
Template SS confidence
		182	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	E	V	S	H	D	L	A	P	Q	F	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	Q	S	Y	L	D	V	V	Q	S	N	V	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions