42 d1in4a2 Probab=99.71   E-value=5.7e-15  Score=105.62  Aligned_columns=194  Identities=27%

Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECHHHCCCCCCC
Q ss_conf             53379089999999997301344544210234567867279971899989999999999828988998642322465277
Q batch____        76 DYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVG  155 (424)
Q Consensus        76 ~~vigq~~a~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~g~~g~gkt~~a~~~a~~~~~~~~~~~~~~~~e~gyvG  155 (424)
                      +.++||+++++.+...+.....+          ..++.++||+||||||||++|+++|+.++.+|+.++++.++...   
T Consensus         9 ~~iiG~~~~~~~l~~~i~~~~~~----------~~~~~~iLl~GppG~GKT~la~~ia~~l~~~~~~~~~~~~~~~~---   75 (223)
T d1in4a2           9 DEFIGQENVKKKLSLALEAAKMR----------GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQG---   75 (223)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHH----------TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHH---
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHC----------CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEEC---
T ss_conf             78036099999999999998736----------87577389975899786479999999848987998410001100---


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCE
Q ss_conf             54467777764432788986212632469887511101366544333316899999998428831541256653563231
Q batch____       156 EDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEF  235 (424)
Q Consensus       156 ~~~~~~i~~l~~~~~~~~~~~~~~vv~lDEIdk~~~~~~~~~~~~~~~~~~vq~~LL~~Le~~~~~~~~~~~~~~~~~~~  235 (424)
                                 ...........++++++||++..              ....++.+++.+++....          ....
T Consensus        76 -----------~~~~~~~~~~~~~~~~~D~~~~~--------------~~~~~~~~~~~l~~~~~~----------~~~~  120 (223)
T d1in4a2          76 -----------DMAAILTSLERGDVLFIDEIHRL--------------NKAVEELLYSAIEDFQID----------IQPF  120 (223)
T ss_dssp             -----------HHHHHHHHCCTTCEEEEETGGGC--------------CHHHHHHHHHHHHTSCCC----------CCCC
T ss_pred             -----------CCHHHHHHHCCCCCEECCCCCCC--------------CHHHHHHHHHHHHCCCCC----------CCCE
T ss_conf             -----------00123555303550110000024--------------888999999998401002----------2780


Q ss_pred             EEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEECC
Q ss_conf             78865664012102310024666764210012455544444311345799999875887762148967741487164257
Q batch____       236 LQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN  315 (424)
Q Consensus       236 ~~I~tsni~fi~~~a~~~~~~~~~~r~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~pE~~~Rl~~iv~~~  315 (424)
                      .++.+++.                                                     .....+....|....+.+.
T Consensus       121 ~~i~~~~~-----------------------------------------------------~~~~~~~~~~~~~~~~~~~  147 (223)
T d1in4a2         121 TLVGATTR-----------------------------------------------------SGLLSSPLRSRFGIILELD  147 (223)
T ss_dssp             EEEEEESC-----------------------------------------------------GGGSCHHHHTTCSEEEECC
T ss_pred             EEEEECCC-----------------------------------------------------CCCCCCHHHHHHHCCCCCC
T ss_conf             69996068-----------------------------------------------------5323402332100002246


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999999998875999999971115982789899999999728997858012899999999999854
Q batch____       316 ELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYD  386 (424)
Q Consensus       316 ~l~~~~l~~Il~~~~~~l~~~~~~~~~~~~i~l~~~~~a~~~ia~~a~~~~~GAR~Lr~iie~~l~~~~~~  386 (424)
                      +++.++...|+           +..+..+++.  ++++++.+|++.+--   .+|.+.+.++++..-....
T Consensus       148 ~~~~~~~~~il-----------~~~~~~~~~~--~~~~~l~~i~~~~~g---~~R~~~~~l~~~~~~a~~~  202 (223)
T d1in4a2         148 FYTVKELKEII-----------KRAASLMDVE--IEDAAAEMIAKRSRG---TPRIAIRLTKRVRDMLTVV  202 (223)
T ss_dssp             CCCHHHHHHHH-----------HHHHHHTTCC--BCHHHHHHHHHTSTT---CHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHH-----------HHHHHHCCCC--CCHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHH
T ss_conf             99989999999-----------9999862899--876899999997199---9899999999999999970