Phyre 2 alignment of P38394 with d2aqea1

Return to main results | Retrieve Phyre Job Id

Job Description | P38394
Confidence | 2.29% | Date | Thu Jan 5 11:58:08 GMT 2012
Rank | 84 | Aligned Residues | 12
% Identity | 8% | Template | d2aqea1
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | SWIRM domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 33 | . | . | . | . | . | . | 40 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | S | K | D | E | P | R | K | Y | C | S | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | N | E | K | E | K | E | L | C | Q | V
Template Known Secondary structure |  | T | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 22 | . | . | . | . | . | . | . | 30 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions