Phyre 2 alignment of P27550 with d1uzhc1

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Job Description | P27550
Confidence | 12.41% | Date | Thu Jan 5 11:44:02 GMT 2012
Rank | 75 | Aligned Residues | 40
% Identity | 20% | Template | d1uzhc1
SCOP info | RuBisCO, small subunit | RuBisCO, small subunit | RuBisCO, small subunit
Resolution | 2.2

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 529 | 530 | . | . | . | . | . | . | . | . | . | 540 | . |  |  | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | A | E | I | E | S | A | L | V | A | H | P | K | . | . | I | A | E | A | A | V | V | G | I | P | H | N | I | K | G | Q | A | I | Y | A | Y | V | T | L | N | H | G | E | E | P | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | R | E | I | V | A | C | T | K | A | F | P | D | A | Y | V | R | L | V | A | F | . | . | . | . | D | N | Q | K | Q | V | Q | I | M | G | F | L | V | Q | R | P | K | T | A | R | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  | . | . | . | . |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |  |  |  |  | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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