30 d3prna_ Probab=55.30   E-value=13  Score=16.21  Aligned_columns=104  Identities=18%

Q ss_pred             CCCCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCHHHEEECCCCHHHHH
Q ss_conf             32366528889999984853999999972125655379999999898607639999988998060144124463898864
Q batch____       101 DKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESR  180 (246)
Q Consensus       101 ~dr~~~~~~G~~~~~~~~~~~~~~~~~~dv~g~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~y~~yyyGV~~~ea~  180 (246)
                      ......-...+...|......+.....++.....+.....+...|++  +++++.....-.=.+.+..+|-         
T Consensus       186 ~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~lg~~Y~~--g~~t~~a~y~~~~~d~~~~~~~---------  254 (289)
T d3prna_         186 GGIVDNDIAFVGAAYKFNDAGTVGLNWYDNGLSTAGDQVTLYGNYAF--GATTVRAYVSDIDRAGADTAYG---------  254 (289)
T ss_dssp             GGCTTCCEEEEEEEECCSSSEEEEEEEEECTTSTTCSEEEEEEEEEE--TTEEEEEEEEEECSTTCCCEEE---------
T ss_pred             CCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCEEEEEEEEEEE--CCEEEEEEEEEECCCCCCEEEE---------
T ss_conf             67776413677767862222788885224567776306999999991--6709999999612466421699---------


Q ss_pred             HCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEEECCEEEEEEEEEEEC
Q ss_conf             136554257760659999999997277789999999998246422463055344489999999949
Q batch____       181 RSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF  246 (246)
Q Consensus       181 ~s~~~~Y~~~~g~~~~~~~~~~y~i~~~w~~~~~~~~~~l~~~i~dSPiv~~~~~~~~~~g~~Y~F  246 (246)
                                        +.+.|.|++...+.+.+..             .+.....+.+||.|.|
T Consensus       255 ------------------lg~~Y~l~~~~~l~~~~g~-------------~~~~~t~a~~Gv~~~F  289 (289)
T d3prna_         255 ------------------IGADYQFAEGVKVSGSVQS-------------GFANETVADVGVRFDF  289 (289)
T ss_dssp             ------------------EEEEEEEETTEEEEEEEEE-------------CTTCCEEEEEEEEEEC
T ss_pred             ------------------EEEEEECCCCEEEEEEEEE-------------CCCCCCEEEEEEEEEC
T ss_conf             ------------------9999956875799999874-------------1577507898799879