Phyre 2 alignment of Q2EET2 with c1ihgA_

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Job Description | Q2EET2
Confidence | 1.28% | Date | Thu Jan 5 12:33:53 GMT 2012
Rank | 78 | Aligned Residues | 42
% Identity | 26% | Template | c1ihgA_
PDB info | PDB header:isomerase | Chain: A: PDB Molecule:cyclophilin 40; | PDBTitle: bovine cyclophilin 40, monoclinic form
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | N | V | I | K | D | L | K | R | V | D | H | K | K | F | L | A | N | K | P | E | L | P | P | H | R | D | F | N | D | K | W | D | D | D | D | D | W | P | K | K | D | Q | P | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | G | V | A | K | I | L | E | N | V | E | V | K | . | . | . | G | E | K | P | A | K | L | C | V | I | A | E | C | G | E | L | K | E | G | D | D | W | G | I | F | P | K | D | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | S |  |  |  | . | . | . | T | T |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | S |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 156 | . | . | . | 160 | . | . | . | . | . | . | . | . |  |  |  | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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