26/01/2012 19:20:10 : INFO  : Run start: Thu Jan 26 19:20:10 GMT 2012
26/01/2012 19:20:13 : INFO  : Initialised job
26/01/2012 19:20:14 : INFO  : Renaming log file 'phyre2_20120126_192009.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/0527998f3d42f5f7/phyre_20120126_192009.log'
26/01/2012 19:20:14 : INFO  : Initialised job:
Sequence
>batch____
MNRIYRVIWNCTLQVFQACSELTRRAGKTSTVNLRKSSGLTTKFSRLTLGVLLALSGSAS
GASLEVDNDQITNIDTDVAYDAYLVGWYGTGVLNILAGGNASLTTITTSVIGANEDSEGT
VNVLGGTWRLYDSGNNARPLNVGQSGTGTLNIKQKGHVDGGYLRLGSSTGGVGTVNVEGE
DSVLTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQAGSNGQVVVEKGGEWLIKNNDS
SIEFQIGNQGTGEATIREGGLVTAENTIIGGNATGIGTLNVQDQDSVITVRRLYNGYFGN
GTVNISNNGLINNKEYSLVGVQDGSHGVVNVTDKGHWNFLGTGEAFRYIYIGDAGDGELN
VSSEGKVDSGIITAGMKETGTGNITVKDKNSVITNLGTNLGYDGHGEMNISNQGLVVSNG
GSSLGYGETGVGNVSITTGGMWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKA
SGIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVNIST
DSLWNLKTSSTNAQLLQVGVLGTGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNSLL
ETFNMYVGTSGTGTLTLTNNGTLNVEGGEVYLGVFEPAVGTLNIGAAHGEAAADAGFITN
ATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTL
VNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQL
SSSDKMFGFTHATGTEFAGVAQLKDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSI
GGLAMNGGTIIFDTDIPAATLAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLIDVPKP
WNDPMANNPLTTLNLLEHDDSHVGVQLVKAQTVIGSGGSLTLRDLQGDEVEADKTLHIAQ
NGTVVAEGDYGFRLTTAPGNGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIGG
EGDLAINTVRQVSLSNGQNDYQGATYVQMGTLRTDADGALGNTRELNISNAAIVDLNGST
QTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTS
ISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATARTDVELDGDNS
RFVGQFNIDTGSALSVNEQKNLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGI
LTLNNDSAAYQGTTDIVGGEIAFGSDSAINMASQHINIHNSGVMSGNVTTAGDMNVMPGG
GTACR

26/01/2012 19:20:15 : INFO  : Checked sequence
26/01/2012 19:20:16 : INFO  : Finding homologues with PSI-BLAST
26/01/2012 19:20:17 : INFO  : PSI-BLAST 3 iterations
26/01/2012 19:27:17 : INFO  : PSI-BLAST 5 iterations
26/01/2012 19:38:58 : INFO  : Finished PSI-BLAST
26/01/2012 19:38:59 : INFO  : Running Buildali to generate a3m file
26/01/2012 20:43:32 : INFO  : Converting to HMM
26/01/2012 20:44:41 : INFO  : Calibrating HMM
26/01/2012 20:45:31 : INFO  : Searching HMM database
26/01/2012 21:16:42 : INFO  : Finished buildali
26/01/2012 21:16:43 : INFO  : Predicting secondary structure
26/01/2012 21:16:48 : INFO  : Predicted secondary structure (PSI-Pred)
26/01/2012 21:16:49 : INFO  : Predicting Disordered regions
26/01/2012 21:16:52 : INFO  : Predicted Disorder (Disopred)
26/01/2012 21:16:53 : INFO  : Running memsat_svm check
26/01/2012 21:25:27 : INFO  : Globular protein
26/01/2012 21:25:28 : INFO  : Predicted Transmembrane (memsat_svm) ID '0527998f3d42f5f7'
26/01/2012 21:25:29 : INFO  : Initialising fold library search
26/01/2012 21:25:31 : INFO  : Initialised search input
26/01/2012 21:25:32 : INFO  : Building Ensemble models
26/01/2012 21:25:35 : INFO  : Building hh.d1dcea2.model.1.pdb
26/01/2012 21:25:43 : INFO  : Building d1dcea2.1.pdb
26/01/2012 21:25:51 : INFO  : Building c2vxaL_.2.pdb
26/01/2012 21:26:00 : INFO  : Building c2pe4A_.3.pdb
26/01/2012 21:26:08 : INFO  : Building d1b26a2.4.pdb
26/01/2012 21:26:18 : INFO  : Building d1u46a_.5.pdb
26/01/2012 21:26:26 : INFO  : Building d1euza2.6.pdb
26/01/2012 21:26:35 : INFO  : Building c2atmA_.7.pdb
26/01/2012 21:26:44 : INFO  : Building c3oqtP_.8.pdb
26/01/2012 21:26:52 : INFO  : Building c2hw2A_.9.pdb
26/01/2012 21:27:01 : INFO  : Building d1bvua2.10.pdb
26/01/2012 21:27:09 : INFO  : Building c2vagA_.11.pdb
26/01/2012 21:27:18 : INFO  : Building d1wv8a1.12.pdb
26/01/2012 21:27:26 : INFO  : Building c3s2xB_.13.pdb
26/01/2012 21:27:34 : INFO  : Building d1hwxa2.14.pdb
26/01/2012 21:27:43 : INFO  : Building d1gxya_.15.pdb
26/01/2012 21:27:51 : INFO  : Building d1iq9a_.16.pdb
26/01/2012 21:27:59 : INFO  : Building d1gtma2.17.pdb
26/01/2012 21:28:06 : INFO  : Building d2hlya1.18.pdb
26/01/2012 21:28:14 : INFO  : Building d1bgva2.19.pdb
26/01/2012 21:28:20 : INFO  : Building d1ntxa_.20.pdb
26/01/2012 21:28:36 : INFO  : Finished HH model building
26/01/2012 21:28:37 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
26/01/2012 21:29:15 : INFO  : html domain output complete ID '0527998f3d42f5f7'
26/01/2012 21:31:14 : INFO  : Run end  : Thu Jan 26 21:31:13 GMT 2012
