Phyre 2 alignment of P32051 with c3izcj_

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Job Description | P32051
Confidence | 7.23% | Date | Wed Jan 25 15:20:49 GMT 2012
Rank | 32 | Aligned Residues | 27
% Identity | 30% | Template | c3izcj_
PDB info | PDB header:ribosome | Chain: J: PDB Molecule:60s ribosomal protein rpl12 (l11p); | PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
Resolution | NULL Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | R | V | I | W | N | C | T | L | Q | V | F | Q | A | C | S | E | L | T | R | R | A | G | K | T | S | T | V | N | L | R | K | S | S | G | L | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | R | V | M | W | G | K | . | . | . | . | . | . | . | . | . | . | V | T | R | T | H | G | N | S | G | V | V | R | A | T | F | R | N | N | L | P
Template Known Secondary structure |  | S |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  | S | S | S | S | S |  |  |  |  |  |  |  | S |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 64 | . | . | . | . | . | 70 |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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