208 c2jisA_ Probab=99.86   E-value=3.4e-19  Score=131.64  Aligned_columns=379  Identities=13%

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEECCC----CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             47636899999997507997188778----99897778089999999999966774202108998678989999999999
Q batch____        12 RHSGITLLMEDLNDGLRTPGAIMLGG----GNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGML   87 (417)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~i~l~~----g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l   87 (417)
                      .......+.+++.+..  +..++.++    |.....+.+...+.+.+...+..+...     |....+...+-+.+.+|+
T Consensus        57 ~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-----~~~~p~~~~~E~~~~~~l  129 (478)
T c2jisA_          57 QGESQKQILERCRAVI--RYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYT-----YEIAPVFVLMEEEVLRKL  129 (478)
T ss_dssp             SCCCHHHHHHHHHHHH--HHSCCTTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTC-----TTTCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHH--CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHHHHHHH
T ss_conf             8899899999999984--364788999832561789998999999999973556431-----221248999999999999


Q ss_pred             HHHHCCCCCHHHEEEECCHHHHHHHHHHHHHCC--------CCEEEECCEEEECCCCHHHHHHHHHHCCCEEEEECEECC
Q ss_conf             987179988667788554799999999997269--------985752020583598617899999975988952010002
Q batch____        88 REKLGWDIEPQNIALTNGSQSAFFYLFNLFAGR--------RADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIEL  159 (417)
Q Consensus        88 ~~~~~~~~~~d~V~~t~G~t~al~~~~~~l~~~--------g~~v~~~~~v~~~~P~y~~~~~~~~~~g~~~~~~~~~~~  159 (417)
                      .+..|.  ++..-++|+|+|++...++.+..+.        |-.......+++..-+|..+...+...|.....+..++.
T Consensus       130 a~l~G~--~~~~G~~t~ggt~an~~al~~ar~~~~~~~~~~g~~~~~~~~i~~s~~~H~s~~ka~~~lglg~~~v~~i~~  207 (478)
T c2jisA_         130 RALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA  207 (478)
T ss_dssp             HHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB
T ss_pred             HHHCCC--CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             997298--988879988913899999999998522456640256678728997065206799988881988873799414


Q ss_pred             CCCCCCCCCHHHHHHHCCC------CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCH-HHCCCCCCCH
Q ss_conf             5686756798799982689------97899986888830343106763378999987691899965630-1027877741
Q batch____       160 LPEGQFKYHVDFEHLHIGE------ETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYG-VPFPGIIFSE  232 (417)
Q Consensus       160 ~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~  232 (417)
                        +..+.+|++.+++.+.+      .+.+|+.+..+|.||.+-+   +++|.++|++||+++.+|.+|+ ..........
T Consensus       208 --d~~g~md~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~i~~~~~~~lhVDaA~g~~~~~~~~~~~  282 (478)
T c2jisA_         208 --DERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH  282 (478)
T ss_dssp             --CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred             --CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECC---HHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCC
T ss_conf             --888747699999998887753997399999548988611277---999999999749859997410020001656531


Q ss_pred             HHHHCCCCEEEECCCHHHCCHHCCEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHH-----HHHHHHCCHHHHHHHHHHH
Q ss_conf             44414898899824423411010507998686783567877543035756279999-----9999838307999999999
Q batch____       233 ARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAM-----MCEMIKRNDLLRLSETVIK  307 (417)
Q Consensus       233 ~~~~~~~~~i~~~s~sK~~~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~-----~~~~l~~~~~~~~~~~~~~  307 (417)
                      .......-..+..+.+|++......|+++..+........................     ....+......+.+.....
T Consensus       283 ~~~~~~~aDsi~~~~HK~l~~p~g~g~~~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~al~l~~~l~~~g~~g~  362 (478)
T c2jisA_         283 LLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGL  362 (478)
T ss_dssp             GGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCCCCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEECCCHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf             22585535678855402035763210001137656336530364446665556654677770689999999999977182


Q ss_pred             HHHHHHHHHHHHHHHHHCCCC-CEEEECCCCEEEEEEECCCCCCC---------------HHHHHHHHHHCCCEEEECHH
Q ss_conf             999999999999999845427-87995588504999987899899---------------89999999847919990723
Q batch____       308 PFYYQRVQETIAIIRRYLPEN-RCLIHKPEGAIFLWLWFKDLPIT---------------TKQLYQRLKARGVLMVPGHN  371 (417)
Q Consensus       308 ~~~~~~~~~~~~~l~~~l~~~-~~~~~~p~~g~~~~~~l~~~~~~---------------~~~l~~~L~~~gV~v~pG~~  371 (417)
                      ....++...+.+++.+.+.+. +++...+.....+++++......               ...+.+.+.+.|..+.....
T Consensus       363 ~~~~~~~~~la~~l~~~L~~~~~~ell~~~~~~~V~Fr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~  442 (478)
T c2jisA_         363 ERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQP  442 (478)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
T ss_conf             89999999999999999841898699868877568999428752112211222225778899999988748869993532


Q ss_pred             HCCCCCCCCCCCCCEEEEECCC---CHHHHHHHHHHHHHHHHHH
Q ss_conf             2466767766678879998059---9899999999999999999
Q batch____       372 FFPGLDKPWPHTHQCMRMNYVP---EPEKIEAGVKILAEEIERA  412 (417)
Q Consensus       372 f~~~~~~~~~~~~~~iRis~~~---~~e~i~~ai~rL~~al~~~  412 (417)
                      .        .....++|+++..   +.|+|+..++.|.+.-+++
T Consensus       443 ~--------~~~~~~lR~~~~~~~tt~edId~ll~~i~~l~~el  478 (478)
T c2jisA_         443 H--------GTRGNFFRVVVANSALTCADMDFLLNELERLGQDL  478 (478)
T ss_dssp             E--------TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred             C--------CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             3--------88503999996797499999999999999988619