14 c1in8A_ Probab=99.78   E-value=3.5e-16  Score=123.15  Aligned_columns=256  Identities=17%

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHC---CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHCCHHHHHHHHC
Q ss_conf             245554334338999999999852---45697899964898828999999986066458864706602299889988752
Q batch____       181 AVKQTQMIGLSPGMTQLKKEIEIV---AASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELF  257 (504)
Q Consensus       181 ~~~~~~lig~s~~~~~~~~~~~~~---a~~~~pvli~Ge~GtGK~~~A~~ih~~s~~~~~~~v~~~c~~~~~~~~~~~lf  257 (504)
                      ...+++++|...+.+++...+...   .....+|+|+|++||||+++|++|+...   +.+|+.++|............ 
T Consensus         5 p~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l---~~~~~~i~~~~~~~~~~~~~~-   80 (298)
T c1in8A_           5 PKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDMAAI-   80 (298)
T ss_dssp             CSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSHHHHHHH-
T ss_pred             CCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCCCHHHHHH-
T ss_conf             9997781270999999999999986338888857998698898889999999970---997999941553320124566-


Q ss_pred             CCCCCCCCCCCCCCCCHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEECCCCCHHHHHHC
Q ss_conf             86666667754466780130579869984658979999999999984296868789865776667640577897899873
Q batch____       258 GHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLA  337 (504)
Q Consensus       258 g~~~~~~~~~~~~~~~~~~~a~~gtl~l~~i~~l~~~~q~~l~~~l~~~~~~~~~~~~~~~~~~r~i~~t~~~l~~~~~~  337 (504)
                                      .....+++++|+|+++.++...|..++..+++..       ......+.+..............
T Consensus        81 ----------------~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  137 (298)
T c1in8A_          81 ----------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQ-------IDIQPFTLVGATVRSGLLSSPLR  137 (298)
T ss_dssp             ----------------HHTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSC-------CCCCCCEEEEEESCGGGSCHHHH
T ss_pred             ----------------HHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCC-------CCCCEEEECCCCCCHHHCCCHHH
T ss_conf             ----------------8851379989994236769899999999970553-------34440665265458563146433


Q ss_pred             CCCCHHHHHHCCEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             89845788602724884488356753499999999999999827799876989999987499998279999999999986
Q batch____       338 GRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVL  417 (504)
Q Consensus       338 ~~~~~~l~~~l~~~~i~iPpLreR~eDi~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~y~wpgN~~eL~~~~~~~~~~  417 (504)
                      ..|...       +.+..|+..++..        ++...+.+.+..   ++.+++..+..+ |+||+|++.+++++++..
T Consensus       138 ~~~~~~-------~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~i~~~-~~g~~R~~~~ll~~~~~~  198 (298)
T c1in8A_         138 SRFGII-------LELDFYTVKELKE--------IIKRAASLMDVE---IEDAAAEMIAKR-SRGTPRIAIRLTKRVRDM  198 (298)
T ss_dssp             TTCSEE-------EECCCCCHHHHHH--------HHHHHHHHTTCC---BCHHHHHHHHHT-STTCHHHHHHHHHHHHHH
T ss_pred             HHHHHH-------CCCCCCCHHHHHH--------HHHHHHHHCCCC---CCHHHHHHHHHH-CCCCHHHHHHHHHHHHHH
T ss_conf             234431-------1367898999999--------999999982985---588999999998-399989999999999999


Q ss_pred             CC---CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHCCCHH
Q ss_conf             47---88568766100330365322356654433455688989999999999999999983986---7899988589988
Q batch____       418 AR---ATRSGDEVILEAQHFAFPEVTLPTPEVAAVPVVKQNLREATEAFQRETIRQALAQNHHN---WAACARMLETDVA  491 (504)
Q Consensus       418 ~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~E~~~i~~al~~~~gn---~~~aA~~Lgisr~  491 (504)
                      +.   ...++.+++.................                  +++.+...+....++   ....|+.||++.+
T Consensus       199 ~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~  260 (298)
T c1in8A_         199 LTVVKADRINTDIVLKTMEVLNIDDEGLDEF------------------DRKILKTIIEIYRGGPVGLNALAASLGVEAD  260 (298)
T ss_dssp             HHHHTCSSBCHHHHHHHHHHHTCCTTCCCHH------------------HHHHHHHHHHHSTTCCBCHHHHHHHHTSCHH
T ss_pred             HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH------------------HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH
T ss_conf             9852988769899999997512551011146------------------8999999999817695479999998599989


Q ss_pred             HHHHHHHHC
Q ss_conf             999999971
Q batch____       492 NLHRLAKRL  500 (504)
Q Consensus       492 tl~rkl~~~  500 (504)
                      ++..++..|
T Consensus       261 ~~~~~~~~~  269 (298)
T c1in8A_         261 TLSEVYEPY  269 (298)
T ss_dssp             HHHHTTHHH
T ss_pred             HHHHHHHHH
T ss_conf             999997657