Email l.a.kelley@imperial.ac.uk Description P37617 Date Thu Jan 5 11:55:52 GMT 2012 Unique Job ID 03e059059d942e33

Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	T	P	D	N	H	G	K	K	A	P	Q	F	A	A	F	K	P	L	T	T	V	Q	N	A	N	D	C	C	C	D	G	A	C	S	S	T	P	T	L	S	E	N	V	S	G	T	R	Y	S	W	K	V	S	G	M	D	C	A
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?					?		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	C	A	R	K	V	E	N	A	V	R	Q	L	A	G	V	N	Q	V	Q	V	L	F	A	T	E	K	L	V	V	D	A	D	N	D	I	R	A	Q	V	E	S	A	L	Q	K	A	G	Y	S	L	R	D	E	Q	A	A	E	E	P
Secondary structure
SS confidence
Disorder												?	?		?																																							?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		Q	A	S	R	L	K	E	N	L	P	L	I	T	L	I	V	M	M	A	I	S	W	G	L	E	Q	F	N	H	P	F	G	Q	L	A	F	I	A	T	T	L	V	G	L	Y	P	I	A	R	Q	A	L	R	L	I	K	S	G	S	Y
Secondary structure
SS confidence
Disorder				?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		F	A	I	E	T	L	M	S	V	A	A	I	G	A	L	F	I	G	A	T	A	E	A	A	M	V	L	L	L	F	L	I	G	E	R	L	E	G	W	A	A	S	R	A	R	Q	G	V	S	A	L	M	A	L	K	P	E	T	A	T
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		R	L	R	K	G	E	R	E	E	V	A	I	N	S	L	R	P	G	D	V	I	E	V	A	A	G	G	R	L	P	A	D	G	K	L	L	S	P	F	A	S	F	D	E	S	A	L	T	G	E	S	I	P	V	E	R	A	T	G	D
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		K	V	P	A	G	A	T	S	V	D	R	L	V	T	L	E	V	L	S	E	P	G	A	S	A	I	D	R	I	L	K	L	I	E	E	A	E	E	R	R	A	P	I	E	R	F	I	D	R	F	S	R	I	Y	T	P	A	I	M	A
Secondary structure
SS confidence
Disorder																																							?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		V	A	L	L	V	T	L	V	P	P	L	L	F	A	A	S	W	Q	E	W	I	Y	K	G	L	T	L	L	L	I	G	C	P	C	A	L	V	I	S	T	P	A	A	I	T	S	G	L	A	A	A	A	R	R	G	A	L	I	K	G
Secondary structure
SS confidence
Disorder																																																											?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		G	A	A	L	E	Q	L	G	R	V	T	Q	V	A	F	D	K	T	G	T	L	T	V	G	K	P	R	V	T	A	I	H	P	A	T	G	I	S	E	S	E	L	L	T	L	A	A	A	V	E	Q	G	A	T	H	P	L	A	Q	A
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Sequence		I	V	R	E	A	Q	V	A	E	L	A	I	P	T	A	E	S	Q	R	A	L	V	G	S	G	I	E	A	Q	V	N	G	E	R	V	L	I	C	A	A	G	K	H	P	A	D	A	F	T	G	L	I	N	E	L	E	S	A	G	Q
Secondary structure
SS confidence
Disorder																																													?	?	?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence		T	V	V	L	V	V	R	N	D	D	V	L	G	V	I	A	L	Q	D	T	L	R	A	D	A	A	T	A	I	S	E	L	N	A	L	G	V	K	G	V	I	L	T	G	D	N	P	R	A	A	A	A	I	A	G	E	L	G	L	E
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Sequence		F	K	A	G	L	L	P	E	D	K	V	K	A	V	T	E	L	N	Q	H	A	P	L	A	M	V	G	D	G	I	N	D	A	P	A	M	K	A	A	A	I	G	I	A	M	G	S	G	T	D	V	A	L	E	T	A	D	A	A	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Sequence		T	H	N	H	L	R	G	L	V	Q	M	I	E	L	A	R	A	T	H	A	N	I	R	Q	N	I	T	I	A	L	G	L	K	G	I	F	L	V	T	T	L	L	G	M	T	G	L	W	L	A	V	L	A	D	T	G	A	T	V	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	730	.	.
Sequence		V	T	A	N	A	L	R	L	L	R	R	R
Secondary structure
SS confidence
Disorder										?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand