BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (229 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AGJ3 tRNA guanosine-2'-O-methyltransferase n=231 Tax=... 477 e-133 UniRef50_Q15Z06 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 289 4e-77 UniRef50_B5JS83 tRNA (Guanosine-2-O)-methyltransferase n=3 Tax=B... 237 2e-61 UniRef50_C7R944 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Ka... 236 6e-61 UniRef50_Q0VRD7 RNA methyltransferase, TrmH family, group 3 n=2 ... 234 2e-60 UniRef50_A3IM41 RRNA methylase SpoU n=1 Tax=Cyanothece sp. CCY01... 219 7e-56 UniRef50_C1XS02 rRNA methylase n=2 Tax=Bacteria RepID=C1XS02_9DEIN 218 1e-55 UniRef50_B3QXG6 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Ch... 210 3e-53 UniRef50_Q0AB97 tRNA guanosine-2'-O-methyltransferase n=2 Tax=Ec... 210 3e-53 UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Ber... 208 1e-52 UniRef50_A1U493 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Ga... 206 7e-52 UniRef50_A4SEW2 tRNA guanosine-2'-O-methyltransferase n=10 Tax=C... 204 2e-51 UniRef50_C5BJC4 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ga... 201 2e-50 UniRef50_Q7TV55 tRNA/rRNA methyltransferase (SpoU) n=34 Tax=cell... 192 6e-48 UniRef50_O67577 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ba... 164 3e-39 UniRef50_A4BEK2 Putative tRNA methyltransferase n=1 Tax=Reinekea... 162 7e-39 UniRef50_B8IYB0 tRNA guanosine-2'-O-methyltransferase n=14 Tax=D... 160 4e-38 UniRef50_B9L1B3 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Ba... 159 9e-38 UniRef50_A6Q996 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 153 4e-36 UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chiti... 135 8e-31 UniRef50_C4L0U6 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ba... 134 3e-30 UniRef50_C9RX94 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Geoba... 131 1e-29 UniRef50_Q84X80 CR004 protein n=1 Tax=Chlamydomonas reinhardtii ... 131 2e-29 UniRef50_D1U4M7 tRNA guanosine-2'-O-methyltransferase n=1 Tax=De... 129 6e-29 UniRef50_A7HIF7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer... 118 2e-25 UniRef50_Q6MNP1 Putative RNA methylase n=1 Tax=Bdellovibrio bact... 114 2e-24 UniRef50_B7DP24 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Alicy... 113 5e-24 UniRef50_C8WR00 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Bacil... 109 7e-23 UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polar... 108 2e-22 UniRef50_B3RWG3 Putative uncharacterized protein n=1 Tax=Trichop... 105 2e-21 UniRef50_A5F9W1 tRNA/rRNA methyltransferase (SpoU) n=16 Tax=Bact... 104 2e-21 UniRef50_O51081 Putative tRNA/rRNA methyltransferase BB_0052 n=1... 104 3e-21 UniRef50_D0LNM3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halia... 103 4e-21 UniRef50_A9S3U1 Predicted protein (Fragment) n=2 Tax=Physcomitre... 102 9e-21 UniRef50_D0MG21 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo... 102 1e-20 UniRef50_A1QYK2 tRNA (Guanosine-2'-O-)-methyltransferase n=7 Tax... 100 3e-20 UniRef50_Q9LXE4 rRNA methylase-like protein n=11 Tax=Magnoliophy... 100 5e-20 UniRef50_B0MYM4 Putative uncharacterized protein n=1 Tax=Alistip... 100 7e-20 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 99 8e-20 UniRef50_Q112U6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Oscil... 99 1e-19 UniRef50_C6WZC0 tRNA (Guanosine18-2'-O-)-methyltransferase n=1 T... 95 2e-18 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 94 3e-18 UniRef50_A6G083 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Plesi... 94 4e-18 UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1... 94 4e-18 UniRef50_Q2S465 RRNA methylase n=1 Tax=Salinibacter ruber DSM 13... 94 4e-18 UniRef50_B5GW91 tRNA/rRNA methyltransferase n=1 Tax=Streptomyces... 93 5e-18 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 92 1e-17 UniRef50_Q09CR8 RRNA methylase n=2 Tax=Cystobacterineae RepID=Q0... 92 2e-17 UniRef50_C0YTB0 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chrys... 91 2e-17 UniRef50_A9GR15 tRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax... 91 2e-17 UniRef50_C7NJ34 rRNA methylase n=2 Tax=Micrococcineae RepID=C7NJ... 91 3e-17 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 91 4e-17 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 90 5e-17 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 89 1e-16 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 89 1e-16 UniRef50_C1E8J5 Predicted protein (Fragment) n=3 Tax=Mamiellales... 89 2e-16 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 88 2e-16 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 88 2e-16 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 88 2e-16 UniRef50_A6DFW8 SpoU protein n=1 Tax=Lentisphaera araneosa HTCC2... 87 3e-16 UniRef50_A4S6N6 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 87 5e-16 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 87 5e-16 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 87 6e-16 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 86 7e-16 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 86 8e-16 UniRef50_C9RPE6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 86 8e-16 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 86 9e-16 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 86 9e-16 UniRef50_Q4A787 TRNA/rRNA methyltransferase n=4 Tax=Mycoplasma R... 86 9e-16 UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsu... 86 1e-15 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 85 2e-15 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 85 2e-15 UniRef50_A4A281 Putative rRNA methylase n=1 Tax=Blastopirellula ... 85 2e-15 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 84 4e-15 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 84 5e-15 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 83 9e-15 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 83 9e-15 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 82 1e-14 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 82 1e-14 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 82 1e-14 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 82 1e-14 UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirel... 82 1e-14 UniRef50_Q488I1 RNA methyltransferase, TrmH family n=1 Tax=Colwe... 82 1e-14 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 82 2e-14 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 82 2e-14 UniRef50_C7M4Y5 tRNA/rRNA methyltransferase (SpoU) n=13 Tax=Bact... 82 2e-14 UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamic... 81 2e-14 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 81 3e-14 UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8... 80 4e-14 UniRef50_B8LD75 Predicted protein n=1 Tax=Thalassiosira pseudona... 80 5e-14 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 80 5e-14 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 79 9e-14 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 79 1e-13 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 79 1e-13 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 78 2e-13 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 78 2e-13 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 78 2e-13 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 78 3e-13 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 78 3e-13 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 77 3e-13 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 77 3e-13 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 77 4e-13 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 77 4e-13 UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma p... 77 4e-13 UniRef50_B8C0J2 rRNA methyltransferase (Fragment) n=1 Tax=Thalas... 77 4e-13 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 77 4e-13 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 77 5e-13 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 77 5e-13 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 77 6e-13 UniRef50_A8SJQ1 Putative uncharacterized protein n=2 Tax=Parvimo... 77 6e-13 UniRef50_Q8Z0C3 rRNA methylase n=30 Tax=Cyanobacteria RepID=Q8Z0... 77 6e-13 UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casse... 76 7e-13 UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verru... 76 7e-13 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 76 7e-13 UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Myc... 76 9e-13 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 76 9e-13 UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 76 1e-12 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 76 1e-12 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 76 1e-12 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 75 1e-12 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 75 1e-12 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 75 1e-12 UniRef50_A0LZG1 TrmH family tRNA/rRNA methyltransferase n=7 Tax=... 75 1e-12 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 75 1e-12 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 75 1e-12 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 75 2e-12 UniRef50_D1CEQ6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 75 2e-12 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 75 2e-12 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 75 2e-12 UniRef50_A2U0X8 SpoU rRNA methylase family protein n=2 Tax=Polar... 75 3e-12 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 74 3e-12 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 74 3e-12 UniRef50_C0BJH2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Flavo... 74 3e-12 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 74 3e-12 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 74 3e-12 UniRef50_D0NTV0 SpoU rRNA Methylase family n=17 Tax=Phytophthora... 74 3e-12 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 74 4e-12 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 74 4e-12 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 74 4e-12 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 74 4e-12 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 74 4e-12 UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synec... 74 4e-12 UniRef50_B0VI64 Putative tRNA/rRNA methyltransferase n=1 Tax=Can... 74 4e-12 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 74 5e-12 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 74 5e-12 UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selen... 74 6e-12 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 73 6e-12 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 73 6e-12 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 73 8e-12 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 73 8e-12 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 73 9e-12 UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hypho... 72 1e-11 UniRef50_C1F3I9 RNA methyltransferase, TrmH family protein n=1 T... 72 1e-11 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 72 1e-11 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 72 1e-11 UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph... 72 1e-11 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 72 1e-11 UniRef50_D1AKE9 tRNA/rRNA methyltransferase (SpoU) n=17 Tax=Fuso... 72 1e-11 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 72 1e-11 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 72 1e-11 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 72 1e-11 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 72 2e-11 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 72 2e-11 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 72 2e-11 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 72 2e-11 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 72 2e-11 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 72 2e-11 UniRef50_D1CFS4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 71 3e-11 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 71 3e-11 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 71 3e-11 UniRef50_A6KZH0 tRNA/rRNA methyltransferase n=10 Tax=Bacteroidal... 71 3e-11 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 71 3e-11 UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA 71 3e-11 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 71 3e-11 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 71 3e-11 UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 71 4e-11 UniRef50_D2R809 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirel... 70 4e-11 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 70 4e-11 UniRef50_B4WGZ3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 70 5e-11 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 70 5e-11 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 70 5e-11 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 70 5e-11 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 70 6e-11 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 70 6e-11 UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1... 70 6e-11 UniRef50_D2NQI2 rRNA methylase n=54 Tax=Actinomycetales RepID=D2... 70 7e-11 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 70 7e-11 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 70 8e-11 UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus A... 69 8e-11 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 69 8e-11 UniRef50_Q6MMA4 Putative tRNA/rRNA methyltransferase n=1 Tax=Bde... 69 1e-10 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 69 1e-10 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 69 1e-10 UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococ... 69 1e-10 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 69 1e-10 UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium ther... 69 1e-10 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 69 1e-10 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 69 1e-10 UniRef50_C6X309 RNA methylase, SpoU family n=1 Tax=Flavobacteria... 69 1e-10 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 69 1e-10 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 69 2e-10 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 69 2e-10 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 69 2e-10 UniRef50_B1M5G3 RNA methyltransferase, TrmH family, group 3 n=16... 69 2e-10 UniRef50_B9KZB6 Possible 23S rRNA methyltransferase tsnR n=1 Tax... 69 2e-10 UniRef50_C6VPS4 rRNA methylase n=8 Tax=Lactobacillales RepID=C6V... 68 2e-10 UniRef50_B4W7H0 RNA methyltransferase, TrmH family n=1 Tax=Brevu... 68 2e-10 UniRef50_A6DS75 tRNA/rRNA methyltransferase n=1 Tax=Lentisphaera... 68 2e-10 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 68 2e-10 UniRef50_C6QC90 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hypho... 68 2e-10 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 68 2e-10 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 68 2e-10 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 68 2e-10 UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulle... 68 3e-10 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 68 3e-10 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 68 3e-10 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 68 3e-10 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 68 3e-10 UniRef50_D1A2Z2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Strep... 68 3e-10 UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 68 3e-10 UniRef50_Q027Q7 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acido... 68 3e-10 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 68 3e-10 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 67 3e-10 UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium ce... 67 3e-10 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 67 4e-10 UniRef50_Q67QG1 rRNA methyltransferase n=1 Tax=Symbiobacterium t... 67 4e-10 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 67 4e-10 UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia agg... 67 5e-10 UniRef50_B0S1P7 23S rRNA methyltransferase n=2 Tax=Finegoldia ma... 67 5e-10 UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2... 67 5e-10 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 67 5e-10 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 67 5e-10 UniRef50_UPI0001BC4585 23S rRNA methyltransferase n=1 Tax=Fusoba... 67 6e-10 UniRef50_A3ZYD4 RNA methyltransferase, TrmH family protein n=3 T... 67 6e-10 UniRef50_Q6ME25 Putative tRNA (Guanosine-2'-O-)-methyltransferas... 67 7e-10 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 67 7e-10 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 67 7e-10 UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Lepto... 66 7e-10 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 66 8e-10 UniRef50_C5QRV0 TrmH family rRNA methyltransferase n=3 Tax=Bacil... 66 8e-10 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 66 8e-10 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 66 8e-10 UniRef50_D0JBH4 SpoU rRNA methylase family protein n=2 Tax=Blatt... 66 8e-10 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 66 9e-10 UniRef50_B3L269 SpoU rRNA Methylase, putative n=3 Tax=Plasmodium... 66 9e-10 UniRef50_C4ZPQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thaue... 66 1e-09 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 65 1e-09 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 65 1e-09 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 65 1e-09 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 65 1e-09 >UniRef50_P0AGJ3 tRNA guanosine-2'-O-methyltransferase n=231 Tax=Bacteria RepID=TRMH_ECO57 Length = 229 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/229 (100%), Positives = 229/229 (100%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM Sbjct: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ Sbjct: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE Sbjct: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG Sbjct: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 >UniRef50_Q15Z06 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z06_PSEA6 Length = 256 Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 135/227 (59%), Positives = 178/227 (78%), Gaps = 5/227 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+ RY RI ++L+ RQP LTVC+EQVHKPHNVSA++R+ DAVG++ +H VW + + Sbjct: 7 MSVERYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAVLRSCDAVGINRIHGVWD-QKTKIR 65 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS WV+ + H +IGDAV+ LK Q MQ+L THLSD++VDFR+IDYT+PT I++GQ Sbjct: 66 KGTAMGSEHWVKTEMHTSIGDAVSVLKQQNMQVLVTHLSDDSVDFRDIDYTQPTAIILGQ 125 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM-LP 179 EK G T+EA+A+AD++I+IPM+GMVQSLNVSVA+A++LYEAQRQR+ AGMY NS+ L Sbjct: 126 EKHGATEEAIAVADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREVAGMY---NSLQLS 182 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQ 226 E E QR+LFEGG+PVL+ V + KGL YPH+++ G I ADA WW MQ Sbjct: 183 EEECQRVLFEGGFPVLSNVCRNKGLDYPHIDEGGNIVADASWWQKMQ 229 >UniRef50_B5JS83 tRNA (Guanosine-2-O)-methyltransferase n=3 Tax=Bacteria RepID=B5JS83_9GAMM Length = 225 Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 114/213 (53%), Positives = 147/213 (69%), Gaps = 2/213 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+P R+ R + L RRQ LTV ME VHKPHN SAI+R+ +AVGVH HAV+P + Sbjct: 1 MSPERHQRFIDTLKRRQTSLTVVMENVHKPHNFSAIVRSCEAVGVHRAHAVYPEGGIGNN 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G++ WVQV THR I LK QG Q+L HL + AVDFRE+DYT+PT ++MG Sbjct: 61 AGTTVGAHKWVQVDTHRNIQTPFQQLKAQGFQLLTAHLDETAVDFREVDYTQPTAVVMGS 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E GI++EA LAD I+IPM+G+ +SLNVSVA+ALIL+EAQRQRQ AGMY E L E Sbjct: 121 ELHGISEEAAQLADHSIVIPMLGLTESLNVSVATALILFEAQRQRQLAGMY--EQPELDE 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQG 213 A ++ L+FE YP LA+ + +G PYP ++ +G Sbjct: 179 ATRKTLMFEWAYPDLARRYQSRGEPYPELDDEG 211 >UniRef50_C7R944 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R944_KANKD Length = 231 Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 152/220 (69%), Gaps = 3/220 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA 61 +P R +I +L+ RQPDLTV M+QVHKPHN++AI+RTADAVG+ VHAV+P T Sbjct: 5 SPARLQKILTLLSNRQPDLTVFMDQVHKPHNLAAIVRTADAVGIGHVHAVFPEDVKFTGH 64 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 ++GS WV H + +A +K +GMQ+LA H SD AVDFR IDYT+PTC+L+G E Sbjct: 65 HTSSGSKRWVTTHKHSNLKSGIAEMKAKGMQVLAAHFSDTAVDFRTIDYTQPTCLLVGSE 124 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181 G++ EA +ADQ +IIPM+GMVQSLNVSVA+ALILYEAQRQR +A MY +P+A Sbjct: 125 LVGVSDEAAEIADQHVIIPMVGMVQSLNVSVATALILYEAQRQRSDAEMY--GECKIPQA 182 Query: 182 EQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADW 221 E + F+ +P + + + + YP +++ G+I+ D +W Sbjct: 183 EVDEICFKALHPTITRFCDKHKIRYPKMDEFGDID-DPEW 221 >UniRef50_Q0VRD7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VRD7_ALCBS Length = 230 Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 154/226 (68%), Gaps = 2/226 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P RY RIC+ L RRQPDLTV M+ VHKPHN++AI+RT DAVG+ +VHAV P +R R Sbjct: 1 MTPERYRRICDTLDRRQPDLTVIMDGVHKPHNIAAIVRTCDAVGILDVHAVLPKNRARMA 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A A GS WVQV D + L+GQG+Q+LA HLSD+A+++R++DYTRPT +L+G Sbjct: 61 AGTAMGSQRWVQVHKRDESTDVIRELQGQGVQVLAAHLSDDAIEYRQVDYTRPTALLLGT 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ E + DQ++ IPM+GMV+S NVSVA+A+IL EA QR+ G Y + + Sbjct: 121 EKFGVSDEVASAVDQNVTIPMMGMVESFNVSVAAAIILSEACEQRRAKGFY--DQPRVAA 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQ 226 A LLF GY +A++ G+PYP ++++G+++ A A +Q Sbjct: 179 ARYHELLFRWGYARIARLCDAHGVPYPELDEEGQVKDSAALTALLQ 224 >UniRef50_A3IM41 RRNA methylase SpoU n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IM41_9CHRO Length = 220 Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 106/213 (49%), Positives = 142/213 (66%), Gaps = 2/213 (0%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS 62 P RY RI ++L +RQPDLT+ E VHKPHN+SAIIRT DAVG+ +VH + T + Sbjct: 5 PRRYHRIRQVLEKRQPDLTILTEDVHKPHNLSAIIRTCDAVGILDVHCINTTDEFPTFSQ 64 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + GS+ WV + +H I + HLK Q I A H +D ++D+REIDYT+PT IL+G EK Sbjct: 65 VSQGSDKWVFLHSHPNIKTGINHLKRQNFNIYAAHFTDQSLDYREIDYTQPTAILLGAEK 124 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 G+++EA L D II+PM+GMVQSLNVSVA+A+IL+EAQRQR MY + S L Sbjct: 125 WGVSEEAANLVDGHIIVPMLGMVQSLNVSVAAAVILFEAQRQRLAQKMY--DTSRLDLDR 182 Query: 183 QQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 ++LFE YP LA + ++KG YP + + G I Sbjct: 183 YHKILFEWSYPALATIYQKKGENYPSLGKNGVI 215 >UniRef50_C1XS02 rRNA methylase n=2 Tax=Bacteria RepID=C1XS02_9DEIN Length = 228 Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 150/224 (66%), Gaps = 12/224 (5%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---- 56 M P R+ +I ++LARRQPDLTV ME+VHK HN SA++R+ DAVGV E H + P + Sbjct: 1 MTPERWQKIQQVLARRQPDLTVLMERVHKWHNFSAVLRSCDAVGVLEAHLI-PAAHGIPT 59 Query: 57 -----MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 R A+ + + WV ++T+ A A L+ +G I A H S A+D+RE+DYT Sbjct: 60 EDQNPSRHTAATSGSAAKWVGLRTYPDTPSAFADLRSRGFVIYAAHFSHKAIDYREVDYT 119 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 RPTCIL+G EK G+T+EA LAD I+IPM+GMVQSLNVSVA+A+IL+EAQRQR AGMY Sbjct: 120 RPTCILLGTEKWGVTEEAATLADGHIVIPMMGMVQSLNVSVAAAVILFEAQRQRIQAGMY 179 Query: 172 LRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 R L A QRLLFE YP A+ +++G YP ++ +GEI Sbjct: 180 DRPR--LEPALHQRLLFEWAYPDWAERCRKEGRDYPALSPEGEI 221 >UniRef50_B3QXG6 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXG6_CHLT3 Length = 219 Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 142/211 (67%), Gaps = 2/211 (0%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R+ +I +L +RQPDLTV ME V+K HN++AIIRT DAVG+ +VHAV +RT ++A Sbjct: 8 RFQQIKRLLDKRQPDLTVVMENVNKAHNLAAIIRTCDAVGIPKVHAVALRPEIRTKQNSA 67 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 +G+N WV V+ H + D + L+ G QI H S A DFR +D+T+PT +++G E G Sbjct: 68 SGANRWVDVQIHNSTEDVFSTLRQGGFQIFVAHFSPQATDFRAVDFTKPTALVVGAEWEG 127 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQ 184 I++ A++LAD + +PM+GMV+SLNVSVA+A++L+EAQRQR G Y + L EA Q Sbjct: 128 ISETAISLADGSLYVPMVGMVESLNVSVATAIMLFEAQRQRTEKGFY--DKPRLDEATYQ 185 Query: 185 RLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 RLLFE YP +A K+K P +N GEI Sbjct: 186 RLLFELTYPQIATAYKQKDKALPKMNMDGEI 216 >UniRef50_Q0AB97 tRNA guanosine-2'-O-methyltransferase n=2 Tax=Ectothiorhodospiraceae RepID=Q0AB97_ALHEH Length = 220 Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 105/215 (48%), Positives = 147/215 (68%), Gaps = 2/215 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M R R+ + L RRQPDL V ++QVHKPHN+SAI+RT DAVGV HAV Sbjct: 1 MTARRLHRMRQTLERRQPDLQVLLDQVHKPHNLSAILRTCDAVGVPRAHAVSRHQDFTVH 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A++G+ WV V+TH + AV ++GQGM++ A HLS+ AVD+R++DYT+P C+L+G Sbjct: 61 RAASSGTGQWVAVETHADLPAAVRAVQGQGMKVYAAHLSEQAVDYRQVDYTKPCCLLLGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G+++E ALAD +IIPM G+ SLNVSVA+A+IL+EAQRQR AG Y E + E Sbjct: 121 EKEGVSEEGAALADGHVIIPMFGLGASLNVSVAAAVILFEAQRQRLAAGQY--ETPRMAE 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 AE R L E +P +A+ +++G PYP +++ G + Sbjct: 179 AEITRTLVEWLHPRIAERCRKEGRPYPALDEDGGV 213 >UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N3Z0_9GAMM Length = 229 Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 106/215 (49%), Positives = 140/215 (65%), Gaps = 2/215 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R R+ ++L +RQPDLT+ + V KPHN+SAIIR+ DA V+E++ VWP +T Sbjct: 1 MTPERVQRMHDILRKRQPDLTLITDAVFKPHNLSAIIRSCDAFAVNELNVVWPYDDYQTF 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS +V VKTH+ + A+ K QG QI+A H D AV +IDYT+PT I+MG Sbjct: 61 RGRAMGSQQYVNVKTHKDVSQAIQGFKQQGYQIVAAHFCDQAVPHYDIDYTKPTAIVMGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ +A+ L D II+PM GMVQSLNVSVA+ALIL EA QR+N GM L EN + E Sbjct: 121 EKNGVSAKAMDLVDHSIIVPMEGMVQSLNVSVAAALILSEAMHQRKNKGM-LGENQLDSE 179 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 Q + FE YP LAK K+ G+ YP + + G+ Sbjct: 180 TYQIQ-FFEWCYPDLAKRCKKLGMAYPKLKENGDF 213 >UniRef50_A1U493 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Gammaproteobacteria RepID=A1U493_MARAV Length = 244 Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 137/222 (61%), Gaps = 3/222 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R ARI ++L RQPDL V +QVHKP N+SAIIR+ DA G+ +H VWP R Sbjct: 1 MTPERLARIKQVLNTRQPDLRVLTDQVHKPRNLSAIIRSCDAFGLANMHVVWPKEGFRAF 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS WV TH T+ +AV LK QG ++ A LSD AVDFRE+DYT P I+MG Sbjct: 61 RKTAGGSFHWVTTHTHPTMDNAVTELKAQGHKLYAAQLSDRAVDFREVDYTVPCTIIMGN 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G+ AD+ I+IPM+GMV+SLNVS A ++IL EAQRQR+ AGM+ + +P+ Sbjct: 121 EVDGVNPVTAEQADEHIVIPMMGMVESLNVSSACSIILSEAQRQRKLAGMF--DQRRMPD 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQ-GEIEADADW 221 E RLLF P + + + LPYP ++ + GE+ W Sbjct: 179 DEYNRLLFCWCQPTVKRYCDDRNLPYPPIDHETGELIDGVGW 220 >UniRef50_A4SEW2 tRNA guanosine-2'-O-methyltransferase n=10 Tax=Chlorobiaceae RepID=A4SEW2_PROVI Length = 232 Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 2/213 (0%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS 62 P R+ RI +MLA RQPDLTV M+ V+KPHN+SAIIR+ DAVG+H+++AV + T + Sbjct: 4 PERFLRIKKMLASRQPDLTVVMDNVNKPHNLSAIIRSCDAVGIHDLYAVSSKKSIHTTQN 63 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 AAAG+ W + + IG L +GMQ+LA ++ + DFR ID+T PT I++G E Sbjct: 64 AAAGAGRWTNLHLRKDIGTLCRKLGMEGMQVLAATNTEESRDFRTIDFTLPTAIVLGAEW 123 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 G++ EA+ AD I IPM GMV+SLNVSVA+ALIL+EA+RQR GMY L E+ Sbjct: 124 EGVSAEAIQAADMAITIPMYGMVESLNVSVAAALILFEAERQRSLKGMY--RTRRLEESL 181 Query: 183 QQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 ++LLFE YP L++ + KG YP +++ G I Sbjct: 182 YRKLLFELSYPRLSRQLREKGGAYPELDEDGGI 214 >UniRef50_C5BJC4 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Gammaproteobacteria RepID=C5BJC4_TERTT Length = 228 Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 142/227 (62%), Gaps = 2/227 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R+ RI +L +RQPDLTV ++VHK N+SAI RT DAVG+ +H V P +T Sbjct: 1 MTPERFQRITSVLNKRQPDLTVITDEVHKGRNLSAITRTCDAVGIDTIHCVMPEDGYQTY 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A + WV V+ H +I V LK +G Q++A +L DN +D+R +DYT+PT +++G Sbjct: 61 NGTSASAEKWVAVQHHSSISAPVNDLKREGFQLVAANLGDNTLDYRNVDYTKPTALVLGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G++ EA A D ++ +PM+GMV+S NVSVA+A+IL EAQ QRQ AG+Y + L Sbjct: 121 EVKGVSPEAAAAVDYNVTVPMVGMVESFNVSVAAAIILMEAQHQRQQAGLY--DQPRLTA 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQA 227 + F +PVLAK G+ YP V + GE++ + W++ QA Sbjct: 179 DVYRARFFHWAHPVLAKWCDDNGVEYPPVREDGEVKNLSAWYSAEQA 225 >UniRef50_Q7TV55 tRNA/rRNA methyltransferase (SpoU) n=34 Tax=cellular organisms RepID=Q7TV55_PROMM Length = 245 Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 100/215 (46%), Positives = 136/215 (63%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS 62 P R+ R+ +L R DLTV +E V KPHN+SAI+R+ DAVGV E HAV R+ T S Sbjct: 21 PRRFDRLKAVLDCRMADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAVNYSGRLPTFNS 80 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A GS W+ +K H +I AV +K G ++ THL NA D+R+ D+ PT ++G EK Sbjct: 81 TAQGSQKWIPLKEHSSIEVAVKAIKDSGFRLYGTHLGGNARDYRDCDFCEPTAFVLGAEK 140 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 G+++ A L D+ I IPM GMVQSLNVSVA+A +L+EA RQR+ AG+ + L A Sbjct: 141 WGLSKLATPLMDEGIFIPMSGMVQSLNVSVAAATLLFEALRQRRLAGIAPQAGEGLEPAL 200 Query: 183 QQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEA 217 Q+ LFE YP +A +++G YP +N QGEI+ Sbjct: 201 YQQRLFEWAYPEVAAWCQQEGKSYPALNDQGEIQG 235 >UniRef50_O67577 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Bacteria RepID=TRMH_AQUAE Length = 211 Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 7/200 (3%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGV---HEVHAVWPGSRMRTMA 61 R R+ E+L +RQ DL V + V HN SAI+RT DAVGV + HA G + + Sbjct: 11 RLKRLREVLEKRQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHA--EGKKAKINE 68 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 GS+ WV ++ + K +G QI+AT LS +V+FRE+DYT+PT +++G E Sbjct: 69 GITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLVVGNE 128 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181 G++ E + +AD+ I+IPM GM QSLNVSVA+ +ILYEAQRQR+ GMY R + L E Sbjct: 129 LQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKGMYSRPS--LSEE 186 Query: 182 EQQRLLFEGGYPVLAKVAKR 201 E Q++L + Y + K KR Sbjct: 187 EIQKILKKWAYEDVIKERKR 206 >UniRef50_A4BEK2 Putative tRNA methyltransferase n=1 Tax=Reinekea blandensis MED297 RepID=A4BEK2_9GAMM Length = 224 Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 85/214 (39%), Positives = 128/214 (59%), Gaps = 6/214 (2%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASA 63 +RY + ++L +RQ D+T+ ++VHK NVSAI+RTAD+VG+ VH V P Sbjct: 4 SRYLKFQQVLNQRQNDMTILTDKVHKSQNVSAIMRTADSVGIPTVHMVKPERGRLVYHHT 63 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 A G++ +V V + T+ + + L+ GM + A H SD A+ +RE DYTRP +++G EK Sbjct: 64 AGGASRFVDVIVYETLSEGIQSLRNAGMALYAAHWSDRAISYREADYTRPFALILGAEKY 123 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQ 183 GI+ EA AD+ +IIPM+G +SLNVSVAS +IL EA QR Y + LP+ + Sbjct: 124 GISPEAADAADEHLIIPMVGACESLNVSVASGIILQEAMHQRMAQQAY----TQLPDQDS 179 Query: 184 --QRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 LF +P +A + LPYP +++ G++ Sbjct: 180 TYHNTLFRWLHPKMAAFCDARQLPYPQLDEDGDM 213 >UniRef50_B8IYB0 tRNA guanosine-2'-O-methyltransferase n=14 Tax=Desulfovibrionales RepID=B8IYB0_DESDA Length = 250 Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 1/168 (0%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA-SA 63 R AR+ E+LA RQPDLT+ + +H PHNVSAI R+ DA GV V+ + + + Sbjct: 63 RKARLLEVLAHRQPDLTLVLANIHDPHNVSAIYRSCDAFGVSRVNLYYTNTPFPALGRKT 122 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +A + WV+ H+ + L+GQ MQ+LAT S A R+ D+TRPT ++MG E + Sbjct: 123 SASARKWVESARHKDSAALMESLRGQNMQVLATSCSPTARPLRDWDFTRPTAVIMGNEHS 182 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 G+ E L +AD ++ IPM GM+QS NVSVA+A+IL EA RQR+ AGMY Sbjct: 183 GVEPELLQMADGELYIPMYGMIQSFNVSVAAAIILSEAARQREAAGMY 230 >UniRef50_B9L1B3 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Bacteria RepID=B9L1B3_THERP Length = 217 Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 81/172 (47%), Positives = 114/172 (66%), Gaps = 3/172 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R AR+ E+LARRQPDLTV +E VH PHNVSA++R+ DAVG+ VH V+ ++ Sbjct: 9 RLARMREVLARRQPDLTVVLENVHDPHNVSAVLRSCDAVGLLRVHLVYTLEEFPELSENV 68 Query: 65 AGSN-SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA--VDFREIDYTRPTCILMGQE 121 +GS W+++ H +I L+ QG I T+L D A VD ++D T+P ++ G E Sbjct: 69 SGSALKWLELVFHPSIEACYRTLRSQGFTIYTTYLGDPARSVDLYDLDLTKPVALVFGNE 128 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 + G++ EA+A AD + +IPM+GMV+SLN+SVA A+ LYEA RQR+ AG Y R Sbjct: 129 QRGVSDEAVAGADGNFVIPMMGMVRSLNISVACAVSLYEALRQRRLAGHYAR 180 >UniRef50_A6Q996 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Epsilonproteobacteria RepID=A6Q996_SULNB Length = 216 Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 125/206 (60%), Gaps = 7/206 (3%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-MRTMASA 63 R RI ++L +QP L V ++ VH N+SAI+RT DAVGV ++ +R +R + Sbjct: 13 RIDRIDQILCCKQPTLKVMLDDVHSSQNLSAILRTCDAVGVQHLYYTTSDNRDLRIHKTI 72 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQ--GMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 G++ WV+ T V K Q G Q++ THL + AV FRE+DYT+PT I+MG E Sbjct: 73 TQGAHRWVERTRISTEEQRVFLQKKQKEGYQVVVTHLEERAVPFREVDYTKPTIIVMGNE 132 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181 K G++ E + LAD IIIPM GMVQSLNVSVA+ALILYEA+RQ AG Y + L + Sbjct: 133 KDGVSSETVELADTVIIIPMQGMVQSLNVSVAAALILYEAERQLAEAGKY--DTPQLSKE 190 Query: 182 EQQRLLFEGGYPVLAKVAKRKGLPYP 207 E++++ + G+ +A+R P Sbjct: 191 EREKI--KSGWLYRDNIARRSKGKIP 214 >UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PC85_CHIPD Length = 197 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 4/194 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV--WPGSRMR 58 M P R R+ +L +RQ LTV +E V PHN+SA++RT DAVG+ +V+ + R R Sbjct: 1 MTPERRERLLSVLNKRQAGLTVVLENVFDPHNISAVLRTCDAVGIQDVYVLNTTTARRKR 60 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 +++ + W+ V +A ++ + +I THL+ +A E+D+T ++ Sbjct: 61 WGHKSSSSAAKWLTVHQFSDTATCMAVVREKYDKIYTTHLAADAKSLYELDFTGSVALVF 120 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E+ G+++E L D + IIP +G+++SLN+SVA A+ +YEA RQ+ AG Y ++N L Sbjct: 121 GNEQEGVSEEIRKLCDGNFIIPQVGIIKSLNISVACAVSIYEAMRQKSIAGHYEQKN--L 178 Query: 179 PEAEQQRLLFEGGY 192 P+A+ LL E G+ Sbjct: 179 PDAQYNALLEEWGF 192 >UniRef50_C4L0U6 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Bacillales RepID=C4L0U6_EXISA Length = 254 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS 62 P R R+ E+L R +T+ E V PHN SA++R+ADA GV +H V ++ + + Sbjct: 41 PDRIKRMYEVLNTRTNHITILTEGVDDPHNQSAVLRSADAFGVQTLHVVEGRAKFKPNSI 100 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A ++ WV V H +I +A+ LK G Q+ AT LS+ A+ E+D ++PT +L G E Sbjct: 101 IAKSADRWVDVVEHGSIEEAIDALKESGYQVYATALSEEAIPLEEVDVSKPTVLLFGNEH 160 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 +G+++ AL AD + +IPM G VQSLN+SVA+A+ LY+ + ++ + + LP + Sbjct: 161 SGVSETALHKADGNFVIPMQGYVQSLNISVAAAISLYDVTTRSRHI---VTDGYELPVED 217 Query: 183 QQRLL 187 Q R+ Sbjct: 218 QARIF 222 >UniRef50_C9RX94 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Geobacillus RepID=C9RX94_GEOSY Length = 247 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 108/181 (59%), Gaps = 10/181 (5%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW---PGSRMRT 59 P R R+ E+L R +TV +E V PHN +A++RTA+A GV +VH V P S R Sbjct: 32 PRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAPFSPNRL 91 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + A + W+ + I A+A LK QG Q+ A++L + + +ID ++PT +L G Sbjct: 92 VTRYA---DQWLTLHHKPDIKTAIADLKSQGYQVYASYLGEGTIPVSDIDLSQPTALLFG 148 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE-AQRQRQNAGMYLRENSML 178 E +G+++EAL LAD +IPM G VQS N+SVA+AL LY+ +R R+ AG R +L Sbjct: 149 NEHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYDVTERARRQAG---RHYYLL 205 Query: 179 P 179 P Sbjct: 206 P 206 >UniRef50_Q84X80 CR004 protein n=1 Tax=Chlamydomonas reinhardtii RepID=Q84X80_CHLRE Length = 316 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 109/162 (67%), Gaps = 1/162 (0%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS-RMRTMASA 63 R RI E++A+R + +E ++ N++A+ RTADA+G VHAV + + Sbjct: 77 RVKRIEEVVAKRTFTVLPIVEGLYDMGNLAAVCRTADALGYGAVHAVNKADGKFKMSQRT 136 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 AAG++ W+ VK + G+ +A +K G QI+ THL+ +++ +E+D+TRPT +++G EK Sbjct: 137 AAGADKWLDVKAWDSTGECLAAMKAAGYQIVTTHLTQSSITIQEVDWTRPTAVVLGNEKF 196 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G++ EA+A AD IIPM GMV+S N+SVA+ALILYEAQ+QR Sbjct: 197 GVSAEAVAAADACAIIPMTGMVESFNISVANALILYEAQQQR 238 >UniRef50_D1U4M7 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4M7_9DELT Length = 226 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 7/178 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ R RI ++LARRQ DLT+ M+ + PHNVSA++R+ DA GV +VH + S+ + Sbjct: 25 ISDKRKQRIDQVLARRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVSDVHLYYTTSQWPDL 84 Query: 61 ASAAAGSN-SWVQVKTHRTIGDAVAHL------KGQGMQILATHLSDNAVDFREIDYTRP 113 ++GS W+++ H V +L G QIL T S A + D+T P Sbjct: 85 GKKSSGSAMKWIRLIRHVDAATMVGNLVGGGGSAHDGGQILRTGFSATARPVMDFDFTIP 144 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 T I++ E G + E AL ++ IPM GMVQSLNVSVA+A+ILYEA QR+ AG+Y Sbjct: 145 TAIILSNEHRGTSPELAALVPDEVYIPMQGMVQSLNVSVAAAIILYEAFTQRKRAGLY 202 >UniRef50_A7HIF7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter RepID=A7HIF7_ANADF Length = 239 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 7/167 (4%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV----WPGSRMR 58 P R ARI ++A R LTV ME P NV+A++RT +A G+ E+H + P R + Sbjct: 28 PERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGIQELHVIEGPMKPYDRNK 87 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++ A + WV V+ + G+ +AHLK +G I ATHL + A + + ++ Sbjct: 88 KISQNA---DKWVDVRRWSSTGECLAHLKAEGFAIYATHLGEGARTLDALSFAGKVALVF 144 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E G++ EA+AL+D +IPM G VQSLNVSVA+A+ + +A +R Sbjct: 145 GNEHRGVSDEAVALSDAVYVIPMHGFVQSLNVSVAAAISIAKAVERR 191 >UniRef50_Q6MNP1 Putative RNA methylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP1_BDEBA Length = 238 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 5/184 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R +I +++A R D V +E ++ N+SA++R+A+ +G H + + + Sbjct: 29 LTDERRQKIEKVVALRNFDTAVVLEGIYDRGNISAVMRSAEGLGFGNFHVIETQEKFKEA 88 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 G++ WV+VK + D V LK QG +I THL NA EID++ T +++G Sbjct: 89 NRVTQGADKWVEVKKWKKTADCVKALKNQGYKIYVTHLDANAKPLHEIDFSGKTALVLGN 148 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR-QNAGMYLRENSMLP 179 E+ G+T E +A ADQ IIIPM G VQS N+SVA AL LY + R + G N+ L Sbjct: 149 ERDGVTPEMIAAADQTIIIPMTGFVQSFNISVAGALGLYHISQDRLKRRGT----NASLT 204 Query: 180 EAEQ 183 E EQ Sbjct: 205 EEEQ 208 >UniRef50_B7DP24 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DP24_9BACL Length = 249 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 1/159 (0%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWV 71 +L RR + V ME V HN +AI+R+A+A GV V + + G++ W+ Sbjct: 37 VLMRRTGYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGKQPFQPSKGVTQGAHKWL 96 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + ++G A+ L +G Q+ AT L D A +D RPT IL G EK G++ EA Sbjct: 97 TIHRMPSVGRAIDALHARGFQVYATDLGDGAEPIDAVDLARPTAILFGNEKDGVSPEARE 156 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYE-AQRQRQNAG 169 AD IPM G VQS NVSVA+A+ LYE +R R+ AG Sbjct: 157 RADGRFYIPMAGFVQSFNVSVAAAIALYELTRRARETAG 195 >UniRef50_C8WR00 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Bacillales RepID=C8WR00_ALIAD Length = 256 Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 85/159 (53%), Gaps = 1/159 (0%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWV 71 +L RR + V ME V HN +AI+R+A+A GV V + G++ W+ Sbjct: 41 VLMRRTSYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGKQPFHPSKGVTQGAHKWL 100 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 ++ IG A+ L +G Q+ AT L + A +D RPT IL G EK G++ EA Sbjct: 101 TLQRMPDIGRAIDALHARGFQVYATDLGEGAQPIDAVDLARPTAILFGNEKDGVSPEARE 160 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYE-AQRQRQNAG 169 AD IPM G VQS NVSVA+A+ LYE +R R+ G Sbjct: 161 RADGRFYIPMAGFVQSFNVSVAAAIALYELTRRARETVG 199 >UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U211_9FLAO Length = 229 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSW 70 ++LA R TV +E +++PHN SA++RT D GV ++H + R G+ W Sbjct: 28 KVLAERTRHFTVVLEDIYQPHNASAVVRTCDIFGVQDLHVIENRYINRVSKYVTKGAQKW 87 Query: 71 VQVKTHRTIGD----AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + K ++T GD + HLK G QI+AT +A ++ + T + G E TGI+ Sbjct: 88 ITTKRYKTDGDNTKTCLNHLKTAGYQIIATSPHADANLLQDFKIDKKTAFVFGAEATGIS 147 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRL 186 AD + IPM+G +S N+SVA+A+IL + + +N+ R + ML E+++L Sbjct: 148 DTVKEHADGFLKIPMVGFTESFNISVAAAIILQDVTTRLKNS----RIDWMLSNDEKEQL 203 Query: 187 LFEGGYPVLAKVAK 200 + + V K Sbjct: 204 YLQWIKETIKNVTK 217 >UniRef50_B3RWG3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RWG3_TRIAD Length = 246 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV-WPGSRMRTMASA 63 R ++ + R + V +E + N AI RT DA+G H + P R++T Sbjct: 54 RLDKMTNAVKNRTRSIAVVLEGITNEGNEQAIYRTMDALGFQTAHRIPSPLYRLKTCGRT 113 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 AG+ W+ +++ ++ + ++ LK G +ILAT + D++ T +++G E+ Sbjct: 114 DAGAMKWIDIESWKSTEECISQLKSCGYKILATSSENKTKTLDSFDFSNKTAVVLGSEQE 173 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQ 183 GI++EA+ L D I M+G V+S NVSVA+A+ILY + R Y + L EAEQ Sbjct: 174 GISKEAMNLVDNVFRISMVGFVESYNVSVAAAIILYHIYQDRIRKLGY---HGDLTEAEQ 230 Query: 184 QRLLFE 189 LL + Sbjct: 231 DDLLLQ 236 >UniRef50_A5F9W1 tRNA/rRNA methyltransferase (SpoU) n=16 Tax=Bacteroidetes RepID=A5F9W1_FLAJ1 Length = 220 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 93/170 (54%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R + ++L R T+ +E V++ HN SA++R+ + G+ E++ + R Sbjct: 14 LTDNRKEKFLKVLENRTKHFTIAVEDVYQMHNTSAVMRSCEVFGIQELNIIEQRFGKRID 73 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G+ WV + T+ ++ L+ +G QI+AT +N ++ D ++P+ + G Sbjct: 74 KEIALGAQKWVDINRFDTVDGCISSLRDKGYQIIATTPHENDCLIQDFDISKPSALFFGT 133 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 EK G++ E L AD + IPM+G +SLN+SV++A+I+ + +N+ + Sbjct: 134 EKDGLSPEILEKADGFLKIPMVGFTESLNISVSAAIIIQNLTNRLRNSDI 183 >UniRef50_O51081 Putative tRNA/rRNA methyltransferase BB_0052 n=15 Tax=Borrelia RepID=Y052_BORBU Length = 218 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 6/181 (3%) Query: 7 ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAG 66 ARI ++L R LT +E + + N SA IRT + +G+ +VH + ++ G Sbjct: 22 ARIEKVLNLRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVIEKKNKHTLNPDVTLG 81 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 S+ W+ + ++ A+ LK G I+AT L+ +++ + I G E TG++ Sbjct: 82 SSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTINNKMAIFFGTELTGLS 141 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYE-AQRQRQNAGMYLRENSMLPEAEQQR 185 E L AD + IPM G QS N+SVA A+++Y R R+++ YL L EAE+ Sbjct: 142 AEVLGAADLYVKIPMYGFTQSYNISVAVAIVMYSLLMRLRKSSIDYL-----LNEAEKSN 196 Query: 186 L 186 L Sbjct: 197 L 197 >UniRef50_D0LNM3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LNM3_HALO1 Length = 231 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R ARI +L+ R LTV +E +H PHN +A++R+ +AVG+ +H P R + + A Sbjct: 33 RAARIDSVLSARLSGLTVAIENLHDPHNGAAVVRSVEAVGLTSLHVAEPIERFQFSPAVA 92 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 GS W++V H+ L+G G ++ A D + +ID ++P+ ++ G E G Sbjct: 93 IGSEKWIRVLRHQGFTACARILRGAGFRMYAA-CPDAEMSMDDIDVSQPSAVVFGNEHEG 151 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYE-AQRQRQNAG 169 +++ A+ D + IPM G QSLN+SV+ A+ +++ A R+R G Sbjct: 152 LSRRAIDACDAKVAIPMHGFTQSLNLSVSVAVSIFQLAARRRALLG 197 >UniRef50_A9S3U1 Predicted protein (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S3U1_PHYPA Length = 241 Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 2/167 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R RI E++A R + + +E + NVSA+ R+ADA+G VH + ++ R Sbjct: 34 LGDERKQRIEEVVANRTYSICIAVEGLLDLGNVSAVCRSADALGFQSVHVISNETKKRYK 93 Query: 61 AS--AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + + G+ W+ + D + L+ +G +I TH++ + V ++D+T PT + Sbjct: 94 KNRKVSMGTEKWLDAELWSNTSDCIDTLRQRGYRIAVTHIAPDTVSIYDMDWTIPTAVFF 153 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E G ++EA+ +D IPM GMV+S N+SVA+ +I++ A R R Sbjct: 154 GNEFMGASEEAIKQSDVRCCIPMAGMVESFNISVAAGIIMHHAARDR 200 >UniRef50_D0MG21 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG21_RHOM4 Length = 259 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 96/167 (57%), Gaps = 4/167 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMR 58 + R RI ++L R + +E + NVSA++R+A+A+G ++ + G + + Sbjct: 52 LTERRRQRIEQVLDGRTYTVVPVVEGLANTGNVSAVMRSAEALG-YQGFGIIKGQVQKYK 110 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T A G++ W+ V T T +AV LK G +I+AT L + A D+T PT ++ Sbjct: 111 TSERTAQGADKWLDVWTWPTAAEAVPALKAAGYRIVATAL-EEAEPIDTFDFTVPTALVF 169 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E G+++E LA+AD +IP++G QS N+SVA+A+ LY AQR R Sbjct: 170 GNEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALYHAQRDR 216 >UniRef50_A1QYK2 tRNA (Guanosine-2'-O-)-methyltransferase n=7 Tax=Borrelia RepID=A1QYK2_BORT9 Length = 232 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 1/169 (0%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R RI E+L+ R LT+ +E + +P N SA +RT + +G+ +H + + Sbjct: 34 RRERIDEVLSNRTNYLTLVLEDIFQPQNASATMRTIEILGLSNIHIIETNNTYTLNPGVV 93 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 G++ W+ + ++ + A +LKG G +I+AT L + A+ + I G E TG Sbjct: 94 LGASKWIDIIKYQCVESAFDNLKGNGYKIVATSLDNEAIFLDDFPIDDKMAIFFGTELTG 153 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYE-AQRQRQNAGMYL 172 ++ L AD + IPM G QS N+SVA +++ Y R R+++ YL Sbjct: 154 LSNTVLENADLHLKIPMYGFTQSYNLSVAVSIVFYSLISRLRKSSIKYL 202 >UniRef50_Q9LXE4 rRNA methylase-like protein n=11 Tax=Magnoliophyta RepID=Q9LXE4_ARATH Length = 350 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 8/187 (4%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS-- 62 R+ R+ E R + + +E + N+SA R+ADA+G+ VH V S R + Sbjct: 143 RFRRVVE---NRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRH 199 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + G+ W+ ++ T + LK +G +I THL + V ++D++ PT I++G E Sbjct: 200 VSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEG 259 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 GI+ EAL L+D IPM GMV S NVSVA+ ++++ A R L + L EAE Sbjct: 260 RGISDEALELSDLRCSIPMNGMVDSFNVSVAAGILMHHAVSDRTTR---LGSHGDLSEAE 316 Query: 183 QQRLLFE 189 ++ L+ E Sbjct: 317 KEILMAE 323 >UniRef50_B0MYM4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYM4_9BACT Length = 228 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 3/149 (2%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQ 72 L R +T+ E + N SA++R +A GV ++H + + + G++ W+ Sbjct: 35 LDSRTRYMTILTENTYHAQNASALVRHCEAFGVQDIHTIETRCKFNPNVNIVRGTDKWID 94 Query: 73 VKTHRTIGDAVAHLKGQGMQILAT--HLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 + HRT +A+A LKG+G +I+AT H D + ++ + P ++ G E GI+ E + Sbjct: 95 LHRHRTTAEAIADLKGRGYRIVATTPHREDKTPETFDVAAS-PFVLVFGTEHAGISDEIV 153 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILY 159 A AD+ + IPM GMV+SLNVS ++A+++Y Sbjct: 154 AAADEFLRIPMCGMVESLNVSASAAILIY 182 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 7/158 (4%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAGSN 68 L + P L V ++Q+ PHN AI+RT D V V + R T+A +AG+ Sbjct: 90 LQNKHPFLLV-LDQISDPHNFGAILRTCDLFNVDGV--IILDKRQVDINATVAKTSAGAF 146 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 ++V V + +A+ +LK QG I AT L+ A + E+ Y P C+++G E TGI+ + Sbjct: 147 NYVPVCRVNNLTNAIEYLKKQGFWIYATSLNTKAQNVSELKYDIPICLIVGNEGTGISAK 206 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 L AD +I IP G + SLNVSVASA+++Y+ + +Q Sbjct: 207 LLKHADFNIYIPTAGHLDSLNVSVASAILIYQIKMLQQ 244 >UniRef50_Q112U6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Oscillatoriales RepID=Q112U6_TRIEI Length = 234 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 5/164 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R +I +L +R D+TV +E +++PHN SA++R+ D+ GV +VH V + Sbjct: 17 ITPARREKILSVLQQRTRDITVILEDIYQPHNASAVLRSCDSFGVQDVHIVENKNIFTIT 76 Query: 61 ASAAAGSNSWVQVKTH-----RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 S GS+ W+ + + + + LK +G I AT + E+ Sbjct: 77 QSVTIGSDRWLTLYRYNEQSINNTEECLKRLKNEGYVIAATTPYKEHITIEELSVNTKVA 136 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 ++ G E G+++ A AD + IPM+G +S N+SV++AL LY Sbjct: 137 LMFGSEINGLSEYAKNNADVSVKIPMVGFSESFNISVSAALCLY 180 >UniRef50_C6WZC0 tRNA (Guanosine18-2'-O-)-methyltransferase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6WZC0_FLAB3 Length = 255 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 2/156 (1%) Query: 24 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 83 ME + + N +AI+R+ +A G H++ A+ + G+ +WV+V+ +++ Sbjct: 72 MEDIFQFRNAAAIVRSVEACGFHKIVAMESENEFNPNLRVTKGAETWVEVEKMPHNLESL 131 Query: 84 AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIG 143 +K +G +ILA NA + P ++ G EK G+T+E L AD+ + IPM G Sbjct: 132 TEIKNRGYKILAVSPEKNATMLPDYQLKEPVALVFGTEKEGVTEEILDFADETVAIPMYG 191 Query: 144 MVQSLNVSVASALILYEAQRQ--RQNAGMYLRENSM 177 +S NVSVA+A+ YE +++ R N L E + Sbjct: 192 FTRSFNVSVAAAICFYELKQKLIRSNIDYKLSEEKL 227 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA--AGSN 68 +++ + P + ++ +H PHN AIIRTA+A G+ H + P R + S S Sbjct: 76 DVIKKDNPKTVLILDHIHDPHNFGAIIRTANAAGIK--HIIIPKDRSTDVTSTVLKVSSG 133 Query: 69 SWVQVKTHR--TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 +V VK + I ++ LK G I ++ L +NAV + ++ Y +++G E+ GI+ Sbjct: 134 GFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVPYNKVQYAGNCALVVGNEEKGIS 193 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 + + D + IP G VQS+NVSVA+ ++L+E Sbjct: 194 KPVVNATDVKVYIPQFGTVQSMNVSVATGILLFE 227 >UniRef50_A6G083 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G083_9DELT Length = 240 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 10/174 (5%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R RI +L R + V +E + PHN +A++R+ +A+G VH + R+ Sbjct: 30 RRERIESVLDARLASVQVAIENPYDPHNAAAVVRSTEALGGWTVHVIAAHERILRAKGTT 89 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQ----------ILATHLSDNAVDFREIDYTRPT 114 G++ W++ + HRT+ D AHL ILA D E+ RP Sbjct: 90 TGTHHWLETRNHRTLADFEAHLGPARAAGGAGGPGEGMILAGACVDATHMLEELPVDRPL 149 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 C+L G E G++ EA A D IP+ G +S N+SV++AL LY +R+ A Sbjct: 150 CLLFGNEHAGLSPEAKASCDLRFRIPIHGFAESYNLSVSAALTLYSVTTRRRAA 203 >UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSD9_9SPHI Length = 234 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 10/183 (5%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSW 70 ++LA+R TV +E ++KPHN SA++RT D G+ +VH + + G++ W Sbjct: 31 KVLAQRTRHFTVVLENIYKPHNASAVLRTCDCFGIQDVHIIEKTREYKVNPFVTRGASQW 90 Query: 71 VQVKTH-------RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 + + + + + + LK G +I T +++D ++ G E Sbjct: 91 LTLHKYFQPEEPENAVINCFSSLKSNGFKIYGTSPDPQTRPIQDLDPNEKIALVFGNEHE 150 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQ 183 GI+ E AD + IPM G +S N+SVA++L L Q Q A Y+ + L E E+ Sbjct: 151 GISNEVKNAADGLVHIPMRGFTESFNISVAASLFL---QNLVQKASDYVIPDYNLTEVEK 207 Query: 184 QRL 186 Q L Sbjct: 208 QEL 210 >UniRef50_Q2S465 RRNA methylase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S465_SALRD Length = 247 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 1/166 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV-WPGSRMRT 59 M R RI ++A R + +E + NVSA++R+A+A+G ++H V R + Sbjct: 38 MRERRLDRIQTVVANRTRSVVPVVEGLVNTGNVSAVMRSAEALGHQDMHVVSGEHDRYKH 97 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 A G+ W+ V HL+ G +++A HL + V R++D+T+PT ++ G Sbjct: 98 SQRTAQGAQHWLDVWHWDAPTACATHLQDAGYRVVAMHLHADTVPIRDLDFTQPTALVFG 157 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E G+T L +D +P+ G +S NVSVA+A+ LY AQ+ R Sbjct: 158 NEDAGVTDTMLEASDAACEVPLPGFTESFNVSVAAAVALYHAQQDR 203 >UniRef50_B5GW91 tRNA/rRNA methyltransferase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GW91_STRCL Length = 182 Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 2/148 (1%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS--AAAGSNSWVQVKTH 76 ++ + +E V P NV +I+RTA A+GV ++ + R + G++ ++ V+T Sbjct: 26 EVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYLDVQTF 85 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 T+ +AV ++ G +++ L+D AV E D + TCI +G E GI+ +AL + D Sbjct: 86 ETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQALGMCDAV 145 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQ 164 IP +G V SLNV+ A A+ YE +RQ Sbjct: 146 AFIPQLGRVGSLNVATALAVACYEVRRQ 173 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 6/157 (3%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSN 68 + + +P+L + ++ + PHN AIIR A+ G+ H + P +R T+ ++G+ Sbjct: 75 IFKDKPNLVLMLDHIQDPHNFGAIIRNANGFGIK--HIIIPKNRACEVTPTVLKISSGAF 132 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + +++ ++ D + L+ G I ++ L D A + + PTC+++G E++G++ Sbjct: 133 TEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKATKLHKTKFATPTCLIVGNEESGVSHT 192 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + +D + I G VQSLNV+ A+A++LYEA ++ Sbjct: 193 LIKHSDALVYIEQKGTVQSLNVASATAVLLYEATKEN 229 >UniRef50_Q09CR8 RRNA methylase n=2 Tax=Cystobacterineae RepID=Q09CR8_STIAU Length = 226 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 12/202 (5%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW-PGSRMRTMAS 62 R +I ++ +R TV ++++ N++A++RT +A+GV EVH V P + + Sbjct: 25 VRKEKIDRVVEQRTRTFTVVLDRLEDSFNMAAVLRTCEAMGVQEVHVVINPEAPFLPNSR 84 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A G + W+ VK ++T + HL+ +G + A+ + + A + + I+ G E+ Sbjct: 85 VAQGCDKWLDVKLYKTFAECREHLQERGFALYASAIREGATSLYSMRFDSKVAIVFGNER 144 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR-----------QNAGMY 171 G++++ LA D IPM G QS+N+S A++ + R + Sbjct: 145 FGVSEDVLAGVDGTFWIPMRGFSQSINISAAASACVSRVMAWREEHLGKVGDLTEEEAQA 204 Query: 172 LRENSMLPEAEQQRLLFEGGYP 193 LRE + +Q++ +F+G P Sbjct: 205 LRERFYVLALKQRKRIFKGKQP 226 >UniRef50_C0YTB0 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTB0_9FLAO Length = 226 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 3/171 (1%) Query: 11 EMLARRQPDLTV-CMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNS 69 E ++ D + +E V++ N +AI+R+ +A G H+V A+ G+++ Sbjct: 26 EHFSKESSDFVLPVVEDVYQFRNAAAIVRSVEACGFHKVVALQEEYSFEPNLRVTKGADT 85 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 WV+V+ ++ ++K + +I+A L NA E + T P ++ G E G++QE Sbjct: 86 WVEVEKLPRNMESFQNIKDRRYKIVAVSLEKNAKMLPEYEVTEPIALVFGTEMEGVSQEI 145 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ--RQNAGMYLRENSML 178 L AD+ + IPM G +S NVSVA+++ +YE +++ + + L E +L Sbjct: 146 LDFADETLAIPMYGFTRSFNVSVAASICMYELKQKLIKSDIDYKLNEEKLL 196 >UniRef50_A9GR15 tRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GR15_SORC5 Length = 508 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 1/161 (0%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R AR+ ++A R +TV M+ H PHN +A++R+ DA G+ +H + + + + Sbjct: 42 RRARLRGVIAARLDAVTVAMDAPHDPHNGAAVLRSCDAFGLQRLHIIERAEQFLVSNTVS 101 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 GS WV V+TH + AVA L+ G +++ATH + + R++ +++G E+ G Sbjct: 102 RGSERWVDVRTHASTEAAVAELRASGHELVATH-PEGELTPRDLSSIPRLALVLGNERDG 160 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I + A + + +PM G +SLNVSV +A++L A R Sbjct: 161 IRPDLAAACARAVRVPMRGFAESLNVSVTAAILLEHATNGR 201 >UniRef50_C7NJ34 rRNA methylase n=2 Tax=Micrococcineae RepID=C7NJ34_KYTSD Length = 271 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 4/165 (2%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 PT + ++ P L V E + KP N+ AI+RTADA GV V A P + + Sbjct: 107 PTPGVALADLPQPDGPGLYVVAEHLEKPGNLGAILRTADAAGVDAVIAADPVTDWGNPNV 166 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 + G+ V V T T + + L G+GM ++AT V ++D T P I +G Sbjct: 167 VRGSKGTVFSVPVATAPTP-EVLDFLAGRGMTLVATT-PHTEVLHTQVDLTGPVAIAVGA 224 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 EKTG+T AL A + IPM+G SLNV+ ++A+++YEA RQR Sbjct: 225 EKTGLTASALEGATHRVRIPMVGRANSLNVATSAAIVVYEAVRQR 269 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 11/156 (7%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEV------HAVWPGSRMRTMASAAAGSNSWVQ 72 +L V ++ V P NV ++RTADA G V ++ G +R A GS + Sbjct: 118 ELIVVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVR----ATMGSLFHLP 173 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 V T + A L+ QG+++LAT L D++ + ++D P I+ G E G+++ L Sbjct: 174 VITGVAEQEVAAFLERQGIRLLATAL-DSSSLYHDVDLRSPVAIVFGNEGAGVSKVILEK 232 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 AD+ + IP+ G +SLNV+VA+A+ILYEA+RQR+ A Sbjct: 233 ADERLYIPLYGRAESLNVAVAAAVILYEARRQRRVA 268 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 11 EMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV-WPGSRMR-TMASAAAG 66 E+LA R L V ++ + PHNV AIIRTA+AV V + G+ + T+ A+AG Sbjct: 98 EVLAAPRNSSPLLVILQGLEDPHNVGAIIRTAEAVAADSVIMIEGKGAPISATVHKASAG 157 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + S ++V +++ + L +G I+A + + +ID+ RPT ++MG E G+ Sbjct: 158 ALSHMRVCKVKSLVKTLDLLHERGFSIVAADMEAEH-NHTDIDWKRPTVLVMGAEGKGLG 216 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E DQ + IPM G V+SLNVSVA+ ++LYEA RQR Sbjct: 217 SETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQR 255 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%) Query: 1 MNPTRYARI----CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P Y +I E+ + + L + ++ V N+ AI RTA+ GVH + GS Sbjct: 86 ISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSGVHAIIVPKKGSA 145 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQ-ILATHLSDNAVDFREIDYTRP 113 +AG+ + V H +G L G+Q +++T ++ ++ +DYT P Sbjct: 146 EINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTEKTEESI--YSVDYTAP 203 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 TCI+MG E G++ + + ++D IPM G + SLNVSV++ ++LYEA RQRQ Sbjct: 204 TCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIRQRQ 256 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 11/174 (6%) Query: 3 PTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP----G 54 P Y + E+L A+ +P + ++ + PHN+ A++RTA+ G H V + P G Sbjct: 81 PVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGAHGV--IIPKRRGG 138 Query: 55 SRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + T+A A+AG+ +V + + V LK G+ I+ + + FR+ D+ P Sbjct: 139 AITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPRPYFRQ-DFRGPV 197 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 +++G E GI+ D + IPM G V SLN SVA AL++YE RQ Q Sbjct: 198 GLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQLQEG 251 >UniRef50_C1E8J5 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=C1E8J5_9CHLO Length = 234 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW-PGSRMRT 59 ++ R AR+ ++ +R DL +E V+ NV A+ R+ +A+G+ + + G + Sbjct: 28 VSEERIARLDAVVQQRSFDLMPILEGVYDIGNVLAVCRSTEALGIGSLGVISDAGLAFKQ 87 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + G+ W ++ R+ +A+ +K +G ++L T + + D+T PT +++G Sbjct: 88 SGRTSGGAVKWTNLEQWRSTEEAIREVKARGYRVLTT-VFEGGHPLEHYDWTVPTAVILG 146 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E+ G++ EA LAD + I M G +SLNVSVAS++I++ A + R L + L Sbjct: 147 NERDGVSDEAKRLADGGVYISMNGFTESLNVSVASSMIMHHAVQDRTRR---LGSHGNLS 203 Query: 180 EAEQQRL 186 E E++ L Sbjct: 204 EREKETL 210 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 7/160 (4%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA----SAAAG 66 ++L L + ++QV PHN+ A IRTA A+G+ V + P R ++ AAG Sbjct: 89 QLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIAAV--IVPRDRSASLTPTARKVAAG 146 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGM-QILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 V+ + +AH+K +++ T L + A+ ++ D++ I+MG E TG+ Sbjct: 147 GAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKALPIQKYDFSGNVAIVMGAEDTGL 206 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + DQ + IPM G +QSLNVSVA+ + LYEA RQR Sbjct: 207 RPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQR 246 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 7/158 (4%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSN 68 + +P + ++ V P N +I R ADA GVH + ++ R + ++ A+AG+ Sbjct: 92 FKKNEPAFFLILDLVEDPQNFGSICRIADAAGVHAI--IYQKKRSVGIVPSVWKASAGAV 149 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 V + I A+ LK + I V F E D+T+P +++G E GI Q Sbjct: 150 WHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDV-FWESDFTQPLGLIVGSEGKGIRQT 208 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +AL D+ I IPM G + SLNVSVASALI +E RQR+ Sbjct: 209 VIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQRK 246 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 12/170 (7%) Query: 5 RYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--- 57 RY I E++ +QP L + ++ + PHN+ AI+RT DA+GV V + +R Sbjct: 77 RYYSIDEIINTIPDGKQP-LLLMLDGLEDPHNLGAILRTCDAIGVDGV--IIGKNRSVGL 133 Query: 58 -RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+A + G+ V+V + + LK + ++ L D + D+R++DY P I Sbjct: 134 NGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDL-DKSQDYRQVDYNMPLVI 192 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 ++G E GI++ D ++++PM+G V SLN SVA+A+ILY+ R Sbjct: 193 VIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYNSRN 242 >UniRef50_A6DFW8 SpoU protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFW8_9BACT Length = 233 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R I ++ + R + + +E +++ HN SAI+R ADA G+ ++ + + + Sbjct: 28 RIELIDKVCSERTEHICLVLENLYQEHNASAILRNADAFGIQNINVIENDNDFAANKEVS 87 Query: 65 AGSNSWVQVK--THRTIGDAV---AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 ++ W+ +K I + V + LK QG +I AT L ++ E+ P + G Sbjct: 88 MSAHKWLDIKAWNESKIDNTVKCLSALKKQGYKICATSLRPESITLDELPVDEPIALCFG 147 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E TG+++ A +AD IPM G +QS NVSVASAL L + + + + E+++ P Sbjct: 148 TELTGLSEVAHEMADYMTYIPMNGFIQSFNVSVASALSLSHLRNKMKRKNI---EHALSP 204 Query: 180 E 180 E Sbjct: 205 E 205 >UniRef50_A4S6N6 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S6N6_OSTLU Length = 216 Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP-GSRMRTMASA 63 R R+ +L R L +E V+ N+ A+ RT +A+G+ V G + Sbjct: 31 RRMRLENVLEHRSFSLLPILEGVYDVGNILAVCRTTEALGIGCASIVSSKGLSFKASGRT 90 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 + G+ W V+ T A+ K +G ++L T D A D+T PT ++ G E+ Sbjct: 91 SGGALKWQHVEQFETSERALRVAKAKGYRVLTTEF-DGAQPLSHYDWTVPTAVVFGNERE 149 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 G++ EA AL D + IPM G +SLN+SVA+AL++ A R N Sbjct: 150 GVSDEARALRDGAVYIPMFGFTESLNISVAAALVMSHAVTDRIN 193 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%) Query: 32 NVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQVKTHRTIGDAVAHLK 87 N AI RTA+ VGVH + + P + S A AG+ +++ + + AV L+ Sbjct: 126 NFGAICRTAECVGVHAI--ILPEKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQ 183 Query: 88 GQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQS 147 G+Q+ + + + ++D+T+P I+MG E+TGI++E L +D+ I +P+ G QS Sbjct: 184 QSGLQVFSASEKAQKLIY-DVDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQS 242 Query: 148 LNVSVASALILYEAQRQR 165 LNVSVA ILYEA RQ+ Sbjct: 243 LNVSVACGAILYEAVRQK 260 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 92/173 (53%), Gaps = 11/173 (6%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P +Y+ + ++L R + V +++V PHN+ +I+RTA+ GVH + + P R Sbjct: 129 VTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFGVHGI--ILPKRR 186 Query: 57 MRTMAS----AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 ++++ ++ G+ V++ + + LK +G+ I + + ++D+ Sbjct: 187 SASVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEEYSY-QVDFGG 245 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 P +++G E GI++ + D+ I IPM+G + SLN SVA +I+YE + R Sbjct: 246 PCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGR 298 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 11/175 (6%) Query: 3 PTRYARICEMLARRQPD---LTV-CMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 P YA + L +++ LTV ++ + PHN+ +I+RTADA GV V + P R Sbjct: 75 PYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADATGVDGV--IIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G + T ++NA D+R ++ Sbjct: 133 TLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R + G Sbjct: 192 AIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKRHDVG 246 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTM 60 +Y + E++ + +L V +Q+ PHN+ AI+RT DA GV V V R T+ Sbjct: 73 KYHSLQEIIKGAKNNLIVLCDQLEDPHNLGAILRTCDACGVDGV--VVGKHRSVGLTSTV 130 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A + G+ + V+V + A+A LK G ++A + +AVD+ E + P +++G Sbjct: 131 AKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDAVDYTEFNVDMPLVLVVGS 190 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 E GI++ D IPM G V SLNVSVA+ ++L++ R+R+ Sbjct: 191 EGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRRK 236 >UniRef50_C9RPE6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPE6_FIBSS Length = 218 Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 8/187 (4%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 R + ++ RR + +E + PHN+SA+IRTA+ G+ +VH + + S Sbjct: 18 RRELLTSVVNRRTRHFCMVLEDLFDPHNISAVIRTAEVFGLQDVHIIEEDNAYSVNKSIL 77 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQI--LATHLSDNAVDFREIDYTRPTCILMGQEK 122 GS W+ + ++ + L+ +G +I +T+ +++ +D +D ++P +G E Sbjct: 78 KGSYKWMSLYLYKKRMLCMEKLREKGYKIAVASTNTTNSVLD---LDLSQPMAFYLGSEF 134 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 G + LA AD + +P G+ +S+NVSVA +++ Q G RE LP+AE Sbjct: 135 HGNHPDTLAHADYEFKLPQYGITESMNVSVAGGVLMTYLDVFMQKQG---REKFALPQAE 191 Query: 183 QQRLLFE 189 + LL + Sbjct: 192 RDALLLD 198 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%) Query: 3 PTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 P YA E L +++ + ++ + PHN+ +I+RTADA GV V + P R Sbjct: 75 PYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADASGVDAV--IIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G I T ++NA D+R++ Sbjct: 133 ALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R Sbjct: 192 GIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVYRKR 242 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 7/152 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQVKT 75 L + ++ V N+ AI+RTA VG H + V P ++ S A AG+ + + + Sbjct: 97 LIIILDGVTDVGNLGAIVRTAVCVGAHAL--VLPKQGSASLGSGAMKTSAGALAHLPICR 154 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + ++ +L+ G+Q++A H ++ T PT IL+G E GI + L D Sbjct: 155 EANLQASINYLQNSGLQVIACH-EKTQTSIYQVKLTVPTAILLGSEDKGIQPQLLNKVDV 213 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IPM+G + SLNVSVA+A+ILYE+ RQR N Sbjct: 214 QASIPMVGPISSLNVSVAAAIILYESFRQRNN 245 >UniRef50_Q4A787 TRNA/rRNA methyltransferase n=4 Tax=Mycoplasma RepID=Q4A787_MYCH7 Length = 233 Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 6/153 (3%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAG 66 + L + +P + + ++ + +N+ IIRTA+ G+ H + P R T ++G Sbjct: 72 DTLVKDKPKIILILDHIQDQNNLGNIIRTANCFGIK--HIILPKKRAAKLNETTMKVSSG 129 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 ++ +I A+ LK I AT L + + +EI + P I++G E TGI Sbjct: 130 GFVGLKFILVNSIVSAINKLKEMDFWIYATDLKEKSRKIQEIQFNYPCAIILGNEATGIK 189 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILY 159 + +L +DQ IP+ G V SLNV+VA+ +IL+ Sbjct: 190 KSSLNASDQTFFIPLEGTVNSLNVTVATGIILF 222 >UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPX8_9FIRM Length = 271 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 12/161 (7%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWPGSRMRTMASAAAGS 67 A R+P L V ++ V P N IIRTADAVG V V+ +R A GS Sbjct: 117 AARKP-LLVVLDGVQDPGNAGTIIRTADAVGADGVILTKGSVDVFSDKTVR----ATMGS 171 Query: 68 NSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQ 127 + V T + + + G Q+LAT L + A +D+ + + I G E G+++ Sbjct: 172 LFHLPVVTDVSAEEVATFAQAAGCQLLATALDEQAKPHFAVDFGKGSLIAFGNEGGGVSE 231 Query: 128 EALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 E LA A++ + IPM G +SLNV V+SA++LYEA RQR A Sbjct: 232 ELLAAAEK-VYIPMYGEAESLNVGVSSAVVLYEAVRQRHFA 271 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 11/175 (6%) Query: 3 PTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 P YA + + ++ V ++ + PHN+ +I+RTADA GV V + P R Sbjct: 75 PYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADASGVDGV--IIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G + +DNA D+R++ P Sbjct: 133 ALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R G Sbjct: 192 AIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQVG 246 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 94/171 (54%), Gaps = 11/171 (6%) Query: 5 RYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--- 57 +Y + ++L +++ + ++++ PHN+ AIIR+A+A GVH + + P R Sbjct: 78 KYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAFGVHGI--IIPKRRAVGV 135 Query: 58 -RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ +AG+ +++ I + + LK +G+ I+ T ++ F E++Y P Sbjct: 136 NATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAEK-SFEELNYDFPVAF 194 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 ++G E G+++ L D + IPM G + SLN SVA+++++Y+ +R++ Sbjct: 195 VIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRKD 245 >UniRef50_A4A281 Putative rRNA methylase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A281_9PLAN Length = 269 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 2/147 (1%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHR-T 78 L V +E V KP N+ AI+RTADAVG + A + + + A + V T T Sbjct: 120 LIVVLEGVEKPGNLGAILRTADAVGADCLIAADARTDIFNPNAIRASLGTIFAVPTFEAT 179 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + +A L+ G Q+ A + + AV + +++ PT +++G E G++ LA +I Sbjct: 180 TAETLAFLRAAGAQMFAARV-EGAVSYEQVELIGPTALILGSEAEGLSDRWLADDVTNIR 238 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQR 165 +PM G+ SLNVS +A++LYEA RQR Sbjct: 239 LPMRGIADSLNVSTTAAVLLYEANRQR 265 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 13/173 (7%) Query: 3 PTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWP 53 P Y + E++A R + L + ++ + P N+ A++RTADA GVH + H+V Sbjct: 99 PVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGVHGILLPRRHSV-- 156 Query: 54 GSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 T+A +AG+ +V V I + LK QG I + + + + T Sbjct: 157 -PLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEI-YDRANLTGA 214 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E G+++ L D + +PM+G + SLN SVA A+++YEAQRQR+ Sbjct: 215 LVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQRR 267 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 9/151 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR-----TMASAAAGSNSWVQVK 74 L V ++++ PHN AI+RTA+A G V G R + +A AAAG+ + V Sbjct: 108 LVVVLDEIADPHNFGAILRTAEASGAQ---GVVIGKRRQAQVTDVVAKAAAGALETLPVA 164 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + A+ LK G I+ + + V + E+DY PT +++G E G+ + D Sbjct: 165 RVANVAQALQRLKQAGYWIVGADV-EAKVPYTEVDYRGPTAVVIGSEGQGMRRWVREQCD 223 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IP++G VQSLN SVA+ ++LYEA RQR Sbjct: 224 FLVSIPILGRVQSLNASVAAGVLLYEAVRQR 254 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 8/157 (5%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQ 72 QP + ++++ PHN+ +I+RTADAVG H + V P R T+A A+ G+ + Sbjct: 96 QP-FFLILDELEDPHNLGSIMRTADAVGAHGI--VIPKRRAVGLTTTVAKASTGAIEHIP 152 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 V + + +K +G+ ++ T S DFR +D P +++G E G+ + Sbjct: 153 VARVTNLARTLEEMKERGIWVVGTDASARE-DFRNMDGNMPLALVIGSEGKGMGRLVKEK 211 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 D I +PM G V SLN SVA+ L++YE R+R G Sbjct: 212 CDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVG 248 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 11/153 (7%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWPGSRMRTMASAAAGSNSWVQV 73 L + ++++ P N+ I+RTA+A + V ++ G +R A G+ + V Sbjct: 124 LLLFLDEIQDPGNLGTILRTAEAAAIDGVVLGSGSVDIYNGKVVR----ATMGALFRIPV 179 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 T + D K +G ++L + L N+V + E DY T +++G E G+++E A A Sbjct: 180 FTQSLV-DTADEWKAKGGRVLISSLEQNSVSYDEADYAGLTALVIGNEGRGVSKEMFAKA 238 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 DQ + IP+ G +SLN +VA+ + +YEAQR+R+ Sbjct: 239 DQFVHIPLYGGAESLNAAVAAGIFVYEAQRKRR 271 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 16/176 (9%) Query: 3 PTRYARICEMLA-----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 P +Y+++ +L ++P + ++ + P N AIIRTADAVGV V + P R Sbjct: 77 PFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAVGVDGV--IIPKRRS 134 Query: 58 ----RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 T+ A++G+ V + + ++ LK Q + IL T + + F E +Y P Sbjct: 135 VDVNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGDRGIFEE-NYNIP 193 Query: 114 TCILMGQEKTGITQEALALADQDII--IPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E +G++ L + D I IPMIG V SLN SVA+A++LYE RQ+ N Sbjct: 194 LALVVGNEASGMS--PLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQKTN 247 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 8/164 (4%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAA 65 + ++ + L + + L + ++ + PHN+ +I+R+ADA GV V + P R + S A Sbjct: 93 FDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADATGVSGV--IIPKRRASGLTSVVA 150 Query: 66 ----GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 G+ V V + LK +G I T + + D+R+ + T +++G E Sbjct: 151 KTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAMEGD--DYRKWNANGKTVLVIGNE 208 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 GI+ L DQ + IPMIG VQSLN SVA+ ++LY+A R Sbjct: 209 GKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFNSR 252 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 9/168 (5%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MR 58 P RYA + E+LA P L V ++++ P N+ AI RTA+ G + V P R Sbjct: 92 PFRYAYVDELLAVEHP-LIVALDEIQDPQNLGAIARTAECAGATGL--VIPARRSADVTP 148 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL- 117 + A+AG+ + + R + D + +G G + D V + +DY+ P +L Sbjct: 149 AVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYGAE-GDGGVPYTGVDYSGPGVVLV 207 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G+ A D I +P+ G + SLNVS A++ +LYE RQR Sbjct: 208 LGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQR 255 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 9/151 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQVKT 75 L V ++ + N AI RT + G + + P ++ + A AG+ + V Sbjct: 98 LFVMLDGITDVRNFGAIARTCECAGADAI--IIPSKNSVSVNADAMKTSAGALHTLPVCR 155 Query: 76 HRTIGDAVAHLKGQGMQILA-THLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + + + + +LK G +I+A T D D+ + +Y P CI+MG E TG+ E L+L D Sbjct: 156 EQNLTNTIKYLKDCGFKIVAATEKGD--YDYTKANYKDPVCIIMGAEDTGVPYEHLSLCD 213 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + I IP++G ++SLNVSVA+ +++YEA +QR Sbjct: 214 EWIKIPLMGKIESLNVSVAAGILIYEAVKQR 244 >UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0C4_9PLAN Length = 272 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 8/160 (5%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAG 66 + LA ++ L +E V KP N+ AI+R+ADA G+ V + G+R+ A+ G Sbjct: 115 DKLAAKRDLLVAVVEGVEKPGNLGAILRSADAAGIDGV--IVCGARLDLYNPNAIRASLG 172 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V T+ A+A L+ Q+LAT + D A+D+ D T I++G E G++ Sbjct: 173 ALFTLPV-IGMTVPQALAWLRMHQFQMLATRV-DGAIDYTTADLRGRTAIILGSEAEGLS 230 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +E L + I +PM+G V SLN+SV +A++ YEA RQR+ Sbjct: 231 REWLGDDIRAISLPMLGTVDSLNLSVTAAILFYEALRQRR 270 >UniRef50_Q488I1 RNA methyltransferase, TrmH family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488I1_COLP3 Length = 180 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 9/165 (5%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM---RT 59 PTR E L + + L V ++ V +N+ A IR ADA + +V + G+ + Sbjct: 17 PTRD----EYLTKPKIPLIVVLDNVTNSYNIGAFIRLADAFAIEKV--IVCGALTISDKK 70 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 M A+ WV V+ + ++ L +G I + L +VD+ ++ Y +++G Sbjct: 71 MKKASRNEAKWVCVEYSDSTTASLQTLLDEGHAIYSVELCHESVDYTKVTYPAKCVLVLG 130 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 E+ G+++ AL L+ Q I IPM GM SLNVS A A++L E Q Sbjct: 131 NERKGVSEAALKLSLQQIHIPMFGMGNSLNVSTAGAIVLAECANQ 175 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 7/162 (4%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA---- 64 I ++ R + + ++++ N AI RTA+ G+ + V PG + S A Sbjct: 109 IADVFERGEVPFFLLLDRITDVRNFGAIARTAECTGIQCI--VIPGRGAAAINSDAMKTS 166 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILA-THLSDNAVDFREIDYTRPTCILMGQEKT 123 +G+ + + V + + V +L+ G+ ++A T S + R D T P I+MG E+ Sbjct: 167 SGALNHISVCREPDLTETVKYLQESGITVVACTEKSARDLYERTTDLTGPMAIIMGSEED 226 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 GI+ E L + D + IP++G V SLNVSVA+ +ILYEA RQR Sbjct: 227 GISPELLRMVDTHVKIPLLGAVGSLNVSVATGVILYEAVRQR 268 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 7/156 (4%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNS 69 A+ + + ++++ PHN+ +I+RTAD+VG H + + P R +T+A A+ G+ Sbjct: 94 AKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGI--IIPKRRSVGLTQTVAKASTGAME 151 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 +V V + + L+ +G+ I T + + D+R +D P I++G E G++ Sbjct: 152 YVPVVRVTNMVRTMEELQKRGLWIFGTD-AKGSSDYRTMDVDMPLAIVIGSEGFGMSCLV 210 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + +PM G V SLN SVA++L+LYE R+R Sbjct: 211 REKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKR 246 >UniRef50_C7M4Y5 tRNA/rRNA methyltransferase (SpoU) n=13 Tax=Bacteroidetes RepID=C7M4Y5_CAPOD Length = 267 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 4/150 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHR 77 L + E KP N+ A++RTADA + V P + + + ++ G V + T Sbjct: 118 LLLVAEAPEKPGNIGALLRTADAANIDAVIIANPKTDLYNPNIIRSSVGCVFTVPIATGS 177 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 T + + LK +G+ L+ + E+ + + I++G E G+T+E L + Q+I Sbjct: 178 T-TEVIDFLKAKGINSYCAALTAFK-PYYEVSFEEASAIVVGTEDQGLTEEWLTHSTQNI 235 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IIPM G++ S+NVSVA+A++++EA+RQR N Sbjct: 236 IIPMEGVIDSMNVSVAAAVLIFEAKRQRVN 265 >UniRef50_Q8NQN8 rRNA methylases n=1 Tax=Corynebacterium glutamicum RepID=Q8NQN8_CORGL Length = 198 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 9/153 (5%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQ 72 QP L + +P N +IR +DAVG V V+ G + + + A AGS + Sbjct: 43 QPRLVSVPVETREPGNAGTLIRVSDAVGADAV--VFAGESVDPLGAKAVRSSAGSLFHIP 100 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREID--YTRPTCILMGQEKTGITQEAL 130 V + I D + L+ +G+QILAT +D VD + D +PT L G E G+ + L Sbjct: 101 VARNNNIADVLGQLRSKGLQILATS-ADGEVDLDDADELLAKPTAWLFGNEAHGLDESLL 159 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 A AD + IP+ G +SLN++ A+++ LYE+ + Sbjct: 160 AQADHRVRIPIRGRAESLNLATAASICLYESSK 192 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 11/160 (6%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEV----HAVWPGSRMRTMASAAAGSNSWVQVK 74 DL + +E + P N+ + RTA+A GV+ + + V P S + + GS + Sbjct: 106 DLFLILENIQDPGNLGTLFRTAEAAGVNHIFLSRNTVDPFSP--KVVRSTMGSLFRLPFS 163 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + LK G+Q+ A L F + + P+ L G E G+T+E A Sbjct: 164 IEEDLFFLCESLKSAGVQVFALDLDGKKTHF-QAAFQGPSAFLFGNEGNGLTKELSQCAT 222 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRE 174 + ++IPM G ++SLNV+ +++++LYEA RQR+ Y++E Sbjct: 223 EKLLIPMEGKIESLNVATSASIVLYEAVRQRR----YIKE 258 >UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8NJ74_COREF Length = 272 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 9/144 (6%) Query: 26 QVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAGSNSWVQVKTHRTIGD 81 + +P N +IR ADAVG V V+ G + + A+AGS V V + I D Sbjct: 125 ETREPGNAGTLIRVADAVGADAV--VFAGETVDPQGPKVVRASAGSLFHVPVARNVNIDD 182 Query: 82 AVAHLKGQGMQILATHLSDNAVDFREID--YTRPTCILMGQEKTGITQEALALADQDIII 139 + L+ QG+QILAT +D VD + +RPT L G E G+ +E LA AD + I Sbjct: 183 VLGQLRSQGLQILATA-ADGEVDLDDAGELLSRPTAWLFGNEAHGLGEELLAKADHRVRI 241 Query: 140 PMIGMVQSLNVSVASALILYEAQR 163 P+ G +SLN++ A+++ LYE+ + Sbjct: 242 PIRGRAESLNLATAASICLYESSK 265 >UniRef50_B8LD75 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LD75_THAPS Length = 542 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 26/182 (14%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS 62 P R RI E+L +R E P NV A +RT D+ G+ V + + A+ Sbjct: 288 PRRLERIDEVLNQRTRHTRFLFENPSNPSNVWACLRTLDSFGIQYVDVIIHSDSYQGKAA 347 Query: 63 --------AAAGSNSWVQVKTHRTIGDAVAHLKGQ-GMQILATHLSDNAVDFRE----ID 109 A GS W+ ++ +I A+ L+ + I A+ L+ ++D R+ +D Sbjct: 348 VNQKRGMRTAMGSACWMTLRQFGSIEAAITSLREEEDCLIYASDLNPASMDVRDLNWDVD 407 Query: 110 YT-------------RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASAL 156 Y+ RP CI+MG E+ GI+ + LAD+ +PM G +S N+SVA+A+ Sbjct: 408 YSSGGNADSDQQKEQRPICIVMGNEERGISDKMRELADETFYLPMCGFAESFNLSVATAI 467 Query: 157 IL 158 L Sbjct: 468 TL 469 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 6/143 (4%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAGSNSWVQVKTHR 77 + ++ + PHN+ AIIRTA+A GV + + P R +T A+AG+ + V Sbjct: 125 LILDHIEDPHNLGAIIRTAEASGVKAI--IIPKRRAAVVSQTAVKASAGAIEHMPVIRVS 182 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + DA+ LK +G I T L++ + D+ +I P I++G E G+++ D Sbjct: 183 NLTDAIKKLKEKGFWIAGTTLAERSEDYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLY 242 Query: 138 IIPMIGMVQSLNVSVASALILYE 160 +PM+G +QSLN SVA+ +I+YE Sbjct: 243 HLPMLGKIQSLNASVAAGIIMYE 265 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 7/153 (4%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAGSNSWVQV 73 P L + ++ + PHN+ A++R+A A GV V + P R T+ AAAG+ + + + Sbjct: 145 PPLLLVLDSLQDPHNLGAVLRSAAAFGVDGV--ILPKDRSAPLSGTVLKAAAGTAALLDI 202 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + A+ LK G I + + + E D+T PTC+++G E+ GI Sbjct: 203 CRTTNLAGALGTLKKHGFWIYGAS-GEASGNLYETDFTGPTCLVLGNEQKGIRPLLKKHC 261 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + IP+ V+SLNVSVA+ ++L E +R++ Sbjct: 262 DFLLAIPLAAGVESLNVSVAAGIMLAEIRRRQH 294 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 19/177 (10%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + +YA + ++L A QP L V ++ + PHN+ AIIR+ADA+G H V V R Sbjct: 107 LRGFKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADALGAHGV--VIAKDR 164 Query: 57 ----MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 T+A A+AG+ ++ I A+ LK G+ + A VD +E ++ Sbjct: 165 AVQVTGTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAAD-----VDAKEPMWSA 219 Query: 113 ----PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 P +++G E G+ L D + IPM G V SLN SV++ ++LYE RQR Sbjct: 220 RLDGPLALVVGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQR 276 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 10/172 (5%) Query: 2 NPTRYARICEM----LARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 NP A + E LA +P D+ V +++V P N+ A+IRTADAVG V + Sbjct: 119 NPQMVAGVFEQQYHQLAGLKPKGNDVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDT 178 Query: 55 SRMRTMASAAAGSNSWVQVKTHR-TIGDAVAHLKGQGMQILATHLSDNAVDFREIDY-TR 112 + ++ + A S V +R + D + KG ++ THL AVD+R I Y + Sbjct: 179 TDPYSLETVRATMGSVFSVPLYRASEADFLNWRKGFSGLVVGTHLK-GAVDYRTIPYANK 237 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 P ++MG E+ G+ D+ IP G SLN+++A+ ++LYE +R+ Sbjct: 238 PVILIMGNEQQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRRE 289 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 7/149 (4%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAGSNSWVQVKTHR 77 + ++ + +N+ +I+RTADAVG H V V P R ++ A+AG+ +V V Sbjct: 131 IILDGITDAYNLGSILRTADAVGAHGV--VIPKRRAIGLNAAVSKASAGAIEYVPVARVT 188 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 I + +LK + + I+ T LS F E D P +++G E G+ + D + Sbjct: 189 NISQTIEYLKKKNIWIVGTDLSGEK-PFFEADLKGPVALVIGSEGEGMGRLVSEKCDFIV 247 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQ 166 IPM G + SLN +VA+A+I+YE +RQR Sbjct: 248 NIPMQGKISSLNAAVAAAIIMYEIRRQRN 276 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 9/169 (5%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 MN + E L+ +P L + ++ V PHN+ A +R ADA+G H V A P R T+ Sbjct: 80 MNYVDLDDVLENLS--EPPLLLILDGVTDPHNLGACLRVADAMGAHAVIA--PKDRSATL 135 Query: 61 ----ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + A G+ V T + + LK G+ I T + + D D + P Sbjct: 136 NATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEAD-TDLYHFDASGPLAW 194 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +MG E G+ + D + IPM G V+SLNVSV+S ++L E++RQR Sbjct: 195 VMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQR 243 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 4/154 (2%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWV 71 AR +P L V + + PHN+ AIIRTA+A G H + G T + +AG+ + Sbjct: 102 ARGEPPLLVIADSIEDPHNLGAIIRTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHL 161 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 V + + LK +G+ I S D + D T P+ +++G E G+++ Sbjct: 162 PVARVTNLVSTIKELKARGVWIYGADASGARWD--QTDLTGPSALVIGSEGFGLSRLVRE 219 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + +PM G V SLN SVA+ +++YEA RQR Sbjct: 220 TCDALLSLPMRGEVNSLNASVAAGILMYEAVRQR 253 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 3/149 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVH-AVWPGSRMR-TMASAAAGSNSWVQVKTHR 77 L V ++++ PHN+ AI+RT D VGV V G ++ T+A + G+ V+V Sbjct: 92 LFVMLDELEDPHNLGAILRTCDCVGVDGVIIGKHRGVKLTPTVAKVSTGAIDTVKVAVVT 151 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + + LK +G + DN+ D+R+ Y P +++G E GI+ D + Sbjct: 152 NLAQTLKGLKKEGFWVAGADF-DNSQDYRQASYDMPLVLVVGSEGFGISPLVKKNCDFFV 210 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +PM G V SLN SVA A++LY+ QR Sbjct: 211 RLPMEGSVSSLNASVACAVLLYQIYAQRN 239 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 11/154 (7%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTA---DAVGV---HEVHAVWPGSRMRTMASAAAGSNSW 70 +P + VC + + PHN+ AI+R+A A+GV E A G T A ++AG+ S Sbjct: 143 KPRIIVC-DSLQDPHNLGAIVRSALASGAIGVLLTRERSAPLGG----TAAKSSAGAISH 197 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 + + + ++A LK G + +AV + D P CI++G E TGI Sbjct: 198 MDICQVTNLVKSLAELKKVGAWVFGAIKDADAVSLFDADLNVPACIVVGSEGTGIRPLVR 257 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 D + IPM+G + SLN SVA+A+IL+EA RQ Sbjct: 258 RECDIQLSIPMVGELDSLNSSVAAAVILFEAMRQ 291 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 11/176 (6%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++P YA + E+LA P + + + P N+ AI+RTA AVGV V + P R + Sbjct: 79 VSPYNYASLDEILAT-HPSCLLVLAYITDPRNLGAILRTAAAVGVEGV--IIPSRRAAGL 135 Query: 61 AS----AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + A+AG V+V + + +LK QG +L +D V E ++ P + Sbjct: 136 TAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAE-ADAKVSLWEAEWNEPLVV 194 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR---QNAG 169 ++G E TG+ + D + IP + LN SVA+A+ILYE R++ +NAG Sbjct: 195 VIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLRRQMKGKNAG 250 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 14/163 (8%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVH-------EVHAVWPGSRMRTMASA 63 E++ Q L + +E + P N+ ++RT + G+ V P + TM Sbjct: 125 ELIKGEQTHLLI-LESIQDPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKTIRSTM--- 180 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 GS V + + ++ LK Q + + A HL + + E DY + T L+G E Sbjct: 181 --GSIYRVPFFITKDLAGTISSLKEQQVNVYAAHLK-GTLSYDEPDYKKKTAFLIGNEGN 237 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G++ E LAD I IPM G V+SLN +++++L++YE RQR+ Sbjct: 238 GLSDEIADLADTYIKIPMQGQVESLNAAISASLLMYETGRQRR 280 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 10/172 (5%) Query: 1 MNPTRYARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 + P YA + E+L+ R+ L + ++ V N+ AI+RTA+ G V + P R Sbjct: 115 LKPYAYADLEEVLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAV--LLPKHRSS 172 Query: 59 TMASAA----AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + +AA +G+ +++ V I + LK +G + + + D + D P Sbjct: 173 PVTAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGADM--DGGDLYQADLKGPL 230 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I+MG E GI+ + D + IPM G V SLNVSVA+AL++YEA RQR Sbjct: 231 VIVMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQRN 282 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 8/168 (4%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAA 65 +A + E+L P L V + + P N+ AI+RTA+A GV AV P R + AAA Sbjct: 86 FATVEELLGTENP-LIVVLNAIQDPRNLGAILRTAEAAGVD--GAVVPSRRAAPLTPAAA 142 Query: 66 GSN----SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 + ++ V I + K +G+ ++ D V + + D P +++G E Sbjct: 143 KTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGAD-PDGPVSYWDADLGGPLALVIGGE 201 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 G+ + A D + IPM G V SLN SVA+AL++YEA RQR+ G Sbjct: 202 AGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEAVRQRRAGG 249 >UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma pulmonis RepID=Q98R32_MYCPU Length = 229 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 8/162 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + + + +M+ ++ L ++ + P+N AI+R+A+A G+ + ++P R + Sbjct: 66 LKSLNFVSLDQMIKSKETIL--ILDHLEDPYNFGAILRSANAFGIKNI--IYPIKRAVDI 121 Query: 61 ASAA--AGSNSWVQVKTHRT--IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 S S +V ++ +++ I + LK QG I ++ L + D +I + P+ + Sbjct: 122 NSTVLKVSSGGFVNLRFYKSNSISATIDKLKKQGYWIYSSSLDPTSEDINKISFNNPSVL 181 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 ++G EK GI+Q +DQ I G VQSLN SVA+ +I Sbjct: 182 VIGNEKKGISQTTKKQSDQLFYIKTKGSVQSLNASVAAGIIF 223 >UniRef50_B8C0J2 rRNA methyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C0J2_THAPS Length = 302 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 3/145 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKT 75 R L + +E+ HN SAI+RTA+A+GV V+ + P + T+ AA W+ V Sbjct: 1 RTSRLVIVVERCTNDHNYSAILRTAEALGVQHVYIISPKTINSTLVDEAA--TEWLTVHE 58 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + + L+ + +I T LS A E + + I+ G E G T E L AD Sbjct: 59 FDDTKECIETLRSENREIWVTDLSQVASCLTE-EGIQKVAIVFGTEAVGCTAEMLNAADL 117 Query: 136 DIIIPMIGMVQSLNVSVASALILYE 160 + +P+ G SLN+SVA+AL++++ Sbjct: 118 RVYLPLRGFADSLNLSVATALVVHQ 142 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 11/171 (6%) Query: 6 YARICEMLARR----QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----M 57 YA + ++LAR +P + +++V PHN+ AI+R+A+AVG H V + P R Sbjct: 77 YADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAVGAHGV--IIPRRRGVGLT 134 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 +A AA G+ +V V + + LKG+G+ + D + D+T P ++ Sbjct: 135 AAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAA-GDAGQEAFNADFTVPLVLV 193 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 +G E G++ + D + +PM G + SLNV+ A+ +++YE RQR A Sbjct: 194 LGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVLRQRGQA 244 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 3/148 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQVKTHR 77 L V ++ + N AIIRTA+ GV + GS +AG+ + + Sbjct: 98 LFVLLDGITDVRNFGAIIRTAECCGVTGIIIQEKGSAPINADTVKTSAGAVFNIPICKVN 157 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 I DAV HL+ ++++A + V F +ID +P I+MG E GI+ L D Sbjct: 158 HIKDAVFHLQTYDIKLIAATEKTDDVIF-DIDLKQPIAIIMGDEAKGISNSILKSVDYKA 216 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQR 165 +PM+G + SLNVSVA LYEA RQR Sbjct: 217 KLPMLGSIASLNVSVACGAFLYEAVRQR 244 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 18/174 (10%) Query: 3 PTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 P YA + ++LA + + + +++V PHN+ A+IRTADA GVH V + P R Sbjct: 76 PREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGVHGV--IIPKRRSV 133 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREI---DYT 111 T+A +AG+ V V +G+ V LK +Q +S + E+ D T Sbjct: 134 SLTATVAKTSAGAVEHVLVAR---VGNLVQTLKD--LQKAGCWVSGAEAEGTEVYRSDLT 188 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I++G E G+++ D+ + +PM G + SLN SVA ++++YE RQR Sbjct: 189 GARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQR 242 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 2/147 (1%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTI 79 L V +E V KP N+ A++R+ADA V P + + + + V T Sbjct: 121 LIVVLESVEKPGNLGAVLRSADASKADAVIVCNPLTDLFNPNLIRSSIGAIFTVPTVACS 180 Query: 80 GDAVAH-LKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 A + LK + ++IL L D+A + + D T I+MG E TG+T AD I Sbjct: 181 SQACMNFLKERNIKILTAQLQDSA-PYYDSDMRGGTAIVMGTESTGLTDAWRKAADAHIR 239 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQR 165 IPM+G + SLNVSV++A++++EA RQR Sbjct: 240 IPMLGQLDSLNVSVSAAILMFEAVRQR 266 >UniRef50_A8SJQ1 Putative uncharacterized protein n=2 Tax=Parvimonas micra ATCC 33270 RepID=A8SJQ1_9FIRM Length = 261 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 11/148 (7%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAV-----WPGSRMRTMASAAAGSNSWVQVKTH 76 +C+E V P N IIRTA+A G++++ + + +R A +N + K Sbjct: 120 ICLENVSDPGNFGTIIRTANAFGINDILTINCVDKYNSKVLRATMGAIFRTN-IIDCKIE 178 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + + L+ G ++++T LS N+ E + ++MG E GI+ E L +++ Sbjct: 179 K-----IKELQSGGYRLISTTLSKNSKFLEEFTFDGKNIVVMGNEANGISAEMLKISNNH 233 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQ 164 + I M ++SLNVS+A+A+I+Y+ + Sbjct: 234 LKIDMDNSMESLNVSIAAAIIMYKIFKN 261 >UniRef50_Q8Z0C3 rRNA methylase n=30 Tax=Cyanobacteria RepID=Q8Z0C3_ANASP Length = 273 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 3/147 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKT--HR 77 + + +E + P N+ IIRTA A G + + A + W ++ T Sbjct: 124 VVLALETIQDPGNLGTIIRTAAAAGASGLLLSQDSVDLDNPKVLRASAGQWFRLATAVSE 183 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + V + GMQ++AT L + + EID+ +P+ IL+G E G++ + A+ADQ++ Sbjct: 184 DLKATVQLCQQAGMQVVAT-LPTAKLTYWEIDWRKPSLILLGNEGAGLSPDLAAMADQEV 242 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQ 164 IP+ V+SLNV++ SAL+LYE QRQ Sbjct: 243 KIPLSPGVESLNVAITSALMLYEVQRQ 269 >UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casseliflavus RepID=C9A4E5_ENTCA Length = 259 Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 11/146 (7%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWPGSRMRTMASAAAGSNSWVQVKT 75 + ++ V P NV +IRTADA G V ++ +R+M GSN + + Sbjct: 117 LILDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLYSTKVLRSMQ----GSNYHLPI-V 171 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 I + L+ G+ I T L+ AV + E+ + ++G E G+ QE LAL D+ Sbjct: 172 EGAIPPFLKQLQAAGVAIYGTELNKEAVPYTELPKGQAAAFILGNEGQGVNQELLALTDK 231 Query: 136 DIIIPMIGMVQSLNVSVASALILYEA 161 ++ IP+ G +SLNV++A+ +++Y A Sbjct: 232 NLYIPIYGQAESLNVAIAAGILMYFA 257 >UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=Q6MA83_PARUW Length = 265 Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIG- 80 V E + KP N+ I+R++DAVG+ + + + A + V T G Sbjct: 118 VVAEAIEKPGNLGTILRSSDAVGIDGLIVCDRCTDIYNPNVVRASVGTLFTVPTVEARGE 177 Query: 81 DAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 D + L QG+ ILA +F ++D T P I +G E+ G+++ + A + IP Sbjct: 178 DILLWLNKQGIDILAAT-PHAEKEFTQVDLTSPVAIAVGTEQLGLSERWMKQATMQVRIP 236 Query: 141 MIGMVQSLNVSVASALILYEAQRQRQ 166 M+G+ SLNV++A+ L+LYE RQRQ Sbjct: 237 MMGVADSLNVAMATTLLLYEVLRQRQ 262 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 11/154 (7%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQVK 74 DL + ++ V PHN+ A +RTADA G + V P + AA +G+ V V Sbjct: 102 DLVLVLDGVTDPHNLGACLRTADAAGAGAI--VTPRHHSAALTPAAIKVASGAAETVPVV 159 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAV--DFREIDYTRPTCILMGQEKTGITQEALAL 132 + +A LK GM + D A D +D PT I+MG E G+ + Sbjct: 160 AVGNLARTLAALKDAGMWTVGL---DGAAHEDLYAVDLRPPTAIVMGAEGEGMRRLTREA 216 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D IPM G V+SLNVSVA+ + L+EA+RQR+ Sbjct: 217 CDHLARIPMGGTVESLNVSVATGITLFEARRQRR 250 >UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A651_MYCS5 Length = 233 Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 6/152 (3%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA--AGSNSWVQVK 74 +P + + ++ + +N+ AIIR+A+A G+ ++ V P + S S ++ + Sbjct: 81 KPKIVLVLDHIMDTYNLGAIIRSANAAGIKDI--VMPKENCADITSNVLKVSSGGFIGIN 138 Query: 75 THR--TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 ++ ++ + LK I + L N+ + Y P ++G E+ GI++ AL Sbjct: 139 FYKVSSLNAFLNKLKKHSYWIYGSMLDKNSTSYYSAKYNFPMAFILGNEEKGISKSALVE 198 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 D+ I IP G V+SLNVSVA+ ++L++ + + Sbjct: 199 VDEKIHIPQSGSVESLNVSVAAGILLFDIKHK 230 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRT- 78 L V +++V N A+ R+A+ +GV + G+ + + + + R Sbjct: 116 LLVMLDRVTDVRNFGAVARSAECLGVDAMIVPSRGAAQLNSDAVKTSAGALYHIPVCRVD 175 Query: 79 -IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + D V +LK G++I+A +++ + D T P ILMG E+ GI+ + L AD + Sbjct: 176 HLIDTVKYLKQCGLRIIACS-EKASINVYDEDLTDPCVILMGSEEDGISMDLLRYADAHV 234 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQR 165 IPM G + SLNVSVA+ +IL E RQR Sbjct: 235 TIPMSGHINSLNVSVATGMILSEVTRQR 262 >UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR56_AZOPC Length = 274 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 8/151 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT----MASAAAGSNSWVQVKT 75 L + +E + KP N+ AI+RTA+A + P + + +S ++ + V + Sbjct: 125 LIIVLESIEKPGNLGAILRTAEAAKIDATIICNPSTDIYNPNVVRSSIGCLFSNPIAVAS 184 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + + +A+LK + +QI A L+ + D+T + I++G E G+T L A Q Sbjct: 185 NE---ETLAYLKSKSVQIFAAELTAFK-QYYNTDFTSASAIVIGAEVNGLTNFWLDNAHQ 240 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I IPM G++ SLNVSV+ A+I +EA RQR Sbjct: 241 RIKIPMQGIIDSLNVSVSVAIITFEAIRQRN 271 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 11/158 (6%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAGSNS 69 R P L + ++ V PHN+ A +R+A+A GV V AV +R +A AA Sbjct: 93 RETPALLLILDGVKDPHNLGACLRSANAFGVRAVIAPKDRAVGVTPVVRKVACGAAEMTP 152 Query: 70 WVQVKT-HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 +++V RTI L+ +G+ I+ T + + +EID T I++G E G+ + Sbjct: 153 FIRVTNLSRTID----WLQKEGVWIVGTAVEAETL-IQEIDLTGDIAIVLGSEGAGLRRL 207 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D IP+ G V+SLNVSVA + LYE QRQR+ Sbjct: 208 TKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQRE 245 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 8/152 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQVKT 75 V ++ + PHN+ A+IR+AD GV V V P R T A+AG+ +V + Sbjct: 94 FVVVLDGIEDPHNLGALIRSADGAGVDGV--VIPERRAVGVTGTAMKASAGAAEYVPIAR 151 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAV-DFREIDYTRPTCILMGQEKTGITQEALALAD 134 I ++ LK + + L + ++ EIDY +++G E G+ D Sbjct: 152 VTNIARSIEDLKDK-YNVWTVGLDERGTQNYDEIDYNMSLALVLGAEGKGLHDLVRKKCD 210 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 + IPM G V SLNVSVA +++YE RQR+ Sbjct: 211 LLVKIPMAGEVSSLNVSVAGGIVMYEVSRQRR 242 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 1 MNPTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 ++P Y E+ + + V ++ + P NV +I RT + G + + P R Sbjct: 77 LSPITYVPEEELFRKTIEEKGFFVVLDHITDPQNVGSIARTVEVFG--GIGLLIPKDRSA 134 Query: 59 TMASAAAGSNSW----VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + + S+S +++ +I A+ K G + A L D ++D+ P Sbjct: 135 PINAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYA--LEKGGKDITKVDFAYPM 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 CI++G E G+++ L +D + IPM G V SLNVS A A+ L+E + ++N G Sbjct: 193 CIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQENTG 247 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQVK 74 +P L + ++ + PHN+ A +RTADA+GVH V A S T++ A G+ V Sbjct: 94 EPPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYI 153 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 T + + LK G+ I+ T +S + D + +MG E G+ + D Sbjct: 154 TVTNLARTLRELKEYGIWIIGTDMSGES-DLYHCNLPDSAAWVMGNEGDGMRRLTREHCD 212 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IPM G V+S+NVSV++ ++L E +RQR Sbjct: 213 MLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 7/159 (4%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAG 66 ++LA+ L + ++ V PHN+ A +R ADA GV V + P + T++ A G Sbjct: 88 DILAKHASPLLLILDGVTDPHNLGACLRNADAAGVAAV--IVPKDKSAPMTATVSKVACG 145 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + V + + + HL+ QG+ I+ T + D + T I+MG E G+ Sbjct: 146 AAETVPLVRVTNLARTMRHLQEQGIWIVGTA-GEATHDIYQAKLTGSLAIVMGAEGDGMR 204 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D I IPM G V SLNVSVAS + L+EA RQR Sbjct: 205 RLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQR 243 >UniRef50_A0LZG1 TrmH family tRNA/rRNA methyltransferase n=7 Tax=Flavobacteria RepID=A0LZG1_GRAFK Length = 273 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 11/171 (6%) Query: 10 CEMLARRQP-DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 E L+ P L + E KP N+ AI+RTADA V V P + + + ++ G Sbjct: 110 VENLSFEHPFPLILVAEAPEKPGNIGAILRTADAAAVDAVIIANPKTDLYNPNIIRSSVG 169 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 S ++ T T + + L+ Q + I A L + + +I++ + I+MG E TG++ Sbjct: 170 SLFTNKIATG-TTSEIIQFLQAQKIHIYAAALQASK-PYSDINFKEASAIIMGTEATGLS 227 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 E L + Q+IIIPM G + S+NVSVA+ ++++EA+RQR L ENS+ Sbjct: 228 NEWLENSTQNIIIPMHGKIDSMNVSVAAGILIFEAKRQR------LVENSL 272 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 13/146 (8%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVH-------EVHAVWPGSRMRTMASAAAGSNSWVQVK 74 + +E P N+ I+RTA+A GV V P TM S ++V+ Sbjct: 139 LVLEDTADPGNLGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVE-- 196 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + + + LK G+ ATHL +++I Y+ + I++G E G++ E LAD Sbjct: 197 ---DLKETIKELKKSGISFYATHLKGEK-SYKDIKYSGRSAIIVGNEARGLSDEVADLAD 252 Query: 135 QDIIIPMIGMVQSLNVSVASALILYE 160 ++IPM G V+SLN +VA+AL++YE Sbjct: 253 TYVLIPMQGKVESLNAAVAAALMMYE 278 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 83/162 (51%), Gaps = 4/162 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR-- 58 N T + + L ++ L + ++Q+H P+N AIIR+ + V + + +++ Sbjct: 74 FNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSLLNVDGI-IILDKKQVQVN 132 Query: 59 -TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+ ++GS +++ + +A+ LK G I AT+L+ N+ D + + + ++ Sbjct: 133 STVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQNSTDMTKTQFANKSVVI 192 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 +G E+ G+++ +D +I +P + S N SVA ++I + Sbjct: 193 IGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 8/158 (5%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSN 68 LA + V ++ V PHN +IIR+AD G+ + + P ++ ++ +AG+ Sbjct: 104 LAEKGSAFVVILDSVTDPHNTGSIIRSADQFGIDGI--IVPENKSAGGFEIISKVSAGAL 161 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 +WV + V LK +G I A+ + + + T ++MG E G+++ Sbjct: 162 AWVPFVEVTNLVRTVERLKKEGFWIYGADAGGKALP--NLTFPKKTVLIMGNEGRGMSRL 219 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D+ + IP G + SLNVSVA+ ++LYE R+++ Sbjct: 220 VEETCDEIVSIPTKGKLDSLNVSVAAGILLYEISRKKE 257 >UniRef50_D1CEQ6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEQ6_THET1 Length = 180 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 2/157 (1%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV--HAVWPGSRMRTMASAAAGSNSWVQ 72 R + DL ++ + P NV A R AD E+ P T+A G++ + Sbjct: 24 RPEVDLVFLLQDLEDPVNVGAAFRIADGCEASEIILTGKTPTPPDSTIAGVGRGAHRRIP 83 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 + +A+ LKG G A +++ AV + + Y C+++G E G+T L++ Sbjct: 84 WRYVEHADEALVELKGMGYMACAIEVAEGAVPYYSLKYPDRVCLVVGHEYHGVTTRTLSV 143 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 D + IPM G ++SLNV VA A++ + Q+ G Sbjct: 144 CDNAVYIPMYGKIKSLNVHVALAVVAFHVLHQQLICG 180 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 9/168 (5%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----M 57 N +Y + +++ ++ V ++Q+ PHN AI+RT+ A GV + + P Sbjct: 74 NDFKYENL-DIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVDAI--IIPKDNAVEVT 130 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 + ++G + + + + + LK + + + + + EID+ C++ Sbjct: 131 PVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEGKP--YYEIDWQGKICLV 188 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E GI + D+ + IPM V+SLNVSV+S +IL+EA++QR Sbjct: 189 FGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 10/170 (5%) Query: 2 NPTRYARICEMLARR---QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--- 55 NP I +M ++ Q D + ++V P N+ IIRTA A GV+ + + G+ Sbjct: 91 NPQGIIAIVKMNNKKLDFQGDFYLFCDKVQDPGNLGTIIRTAHAAGVNGI-VLSKGTVDI 149 Query: 56 -RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+ S GS ++ + + LK G ++ T L +++ DF + D Sbjct: 150 YNEKTIRSTM-GSLFYMPIYYDDDEFSLIKSLKKDGFTLIVTSL-ESSKDFFKEDLKGKI 207 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 + +G E G++ E L LAD+ + IPM G +SLNV++A+++I+YE RQ Sbjct: 208 ILTVGNEGNGVSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQ 257 >UniRef50_A2U0X8 SpoU rRNA methylase family protein n=2 Tax=Polaribacter RepID=A2U0X8_9FLAO Length = 171 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 6/149 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEV--HAVWPGSRMRTMASAAAGSNSWVQVKTHR 77 +T+ + + P N+ R +++ GV ++ H P R + + A + + ++ +T+ Sbjct: 18 ITIVCDAIRTPENIGMCFRISESFGVEKIYFHENSPSIENRKVINTARNTINQIEYQTYS 77 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR--PTCILMGQEKTGITQEALALADQ 135 + LK +G I+ ++D ++D ++ D+ + +L+G E+ GI E + L D+ Sbjct: 78 EFDQLIQELKQKGNTIIGIEITDKSIDIQDFDFKKYEKIVLLLGSERNGI--ENINLVDE 135 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQ 164 I IPM G S+NV + A+ LYE Q Sbjct: 136 TIAIPMYGRNSSMNVIHSLAITLYEITNQ 164 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 11/174 (6%) Query: 5 RYARICEML-ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RT 59 RYA + ++L +P L + ++ V PHN+ A +R ADA GVH V V P R T Sbjct: 81 RYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAV--VVPKDRAVGLSAT 138 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + A+G+ V + + LK G+ I+ T +D + TRP ++G Sbjct: 139 VHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGT-AADAPDTLDSVTLTRPLAWVLG 197 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR---QRQNAGM 170 E G+ + D + IPM G ++SLNVSV++ + L+E R QR +G+ Sbjct: 198 AEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQHSQRTGSGL 251 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 11/172 (6%) Query: 2 NPTRYARICEMLAR-RQ--PD-LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 P +Y + +++ R RQ P+ + V ++ + PHN+ AI R+ +A G+ + V P R Sbjct: 178 TPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFGMQGM--VIPQRRA 235 Query: 57 ---MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 T+ AAG+ S + V + A+ +LK QG + T S A D+ RP Sbjct: 236 AGVTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGT-TSRGADPIYSADFQRP 294 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E GI+ DQ + IP+ G +SLN SVA+ + LYE RQR Sbjct: 295 IALVVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQR 346 >UniRef50_C0BJH2 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJH2_9BACT Length = 264 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 3/156 (1%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS--AAAGSNSW 70 L + + + +E KP N+ A+ RTA A + V P + S ++ G Sbjct: 108 LKLNKNSIVLVIEAPEKPGNIGALYRTAAAAKIDAVIIANPKTDFYNPNSIRSSLGGIFI 167 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 + +I + +A+LK + I ++ AV + + +YT P ++MG E TG+ Q L Sbjct: 168 LPTAIASSI-EVIAYLKENKITIATAAINSKAVPYDQFEYTPPCALVMGTESTGLDQLWL 226 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +Q+++IPM V SLN+SV++ +++YE QR+ + Sbjct: 227 NETNQNLMIPMADEVDSLNLSVSAGILMYECQRKNK 262 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 8/163 (4%) Query: 10 CEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGS 67 C LA R +P + ++ + P NV ++RTA+ VGVH V V PG R + A + Sbjct: 86 CLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVGVHGV--VIPGRRAAEVTPAVVNT 143 Query: 68 NSW----VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +S ++V + + ++ G+ ++ + A ++ +D P +++G E Sbjct: 144 SSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLPLALVLGAEGP 203 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+ + D + +PM G + SLNV+VA +++LY A R R+ Sbjct: 204 GLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAWRVRE 246 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 9/160 (5%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAG 66 +LA+ L + ++ V PHN+ A +R ADA GV+ + + + + ++ +AS AA Sbjct: 89 LLAQHTAPLLLVLDGVTDPHNLGACLRCADAAGVNAIIIPRNRSAYLNATVKKVASGAAE 148 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHL-SDNAVDFREIDYTRPTCILMGQEKTGI 125 + +QV + + L+ + IL T + +D+ + +T P +++G E GI Sbjct: 149 TMPLIQVTN---LARTLRLLQEHNILILGTTIEADSHIYQTSFKFTSPIALVVGAEGNGI 205 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + ++ + IPM+G V SLNVSVA + L+E RQR Sbjct: 206 RRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFEVVRQR 245 >UniRef50_D0NTV0 SpoU rRNA Methylase family n=17 Tax=Phytophthora infestans T30-4 RepID=D0NTV0_PHYIN Length = 1346 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 11/162 (6%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAGSNSWV 71 RQP L +C V K N++ + RT + ++ V P RM T + +A ++ W+ Sbjct: 1182 RQP-LIMCASLVDKVPNLAGLARTCEIFNAQKL--VVPNLRMTQQDVTFVNVSATAHKWM 1238 Query: 72 QVKTHRTIGD----AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQ 127 ++ R GD A+ K +G I+A + ++V R +++G+EK GI Sbjct: 1239 PLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPV 1298 Query: 128 EALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 E L L D + IP G+V+SLNV V+ AL+L+E +Q+ +G Sbjct: 1299 EVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQLMSG 1340 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 11/153 (7%) Query: 24 MEQVHKPHNVSAIIRTADAVGV------HEVHAVWPGSRMRTMASAAAGSNSWVQVKTHR 77 +E + P N+ IIR + G+ H+ ++ +R+ GS + Sbjct: 118 LETIQDPGNLGTIIRAGEGAGITGIVMNHDTADIYNPKVIRS----TMGSIFRMPFVYAD 173 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + DA +K +G+++ A HL ++ + DYT L+G E G+T+E +LAD + Sbjct: 174 DLQDACLLMKNRGVRLFAAHLK-GMNNYDQEDYTDNVGFLIGNEANGLTEETTSLADCLV 232 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 IPM G V+SLN ++A++++++E RQR++ + Sbjct: 233 KIPMEGKVESLNAAIAASVLMFETARQRRSCSV 265 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 7/152 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQVKT 75 + ++QV PHN+ AIIRTA A G H + ++P R + A+AG+ + + + Sbjct: 95 FIIILDQVQDPHNLGAIIRTAYAAGAHGL--IYPRKRSADITPVVTKASAGAVNHLPLAK 152 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 I +A LK G+ I T + + DY P +++G E G+ + D Sbjct: 153 VSNINYTIADLKDMGLWITGTDVRGTR-PYYSADYKGPVGLVIGNEGKGMRRLVKENCDF 211 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + IPM G + SLN SVA+ ++++E RQR++ Sbjct: 212 VVNIPMSGELGSLNASVAAGVVIFEVVRQRRS 243 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 7/160 (4%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP----GSRMR 58 T +++ ++ L + ++++ P N AIIRTA+ GV + ++ S Sbjct: 74 KTSLESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDAI--IYKKHHQASIND 131 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + + G+ +++ + + + + +L+ +G + AT L + + ++DY T ++ Sbjct: 132 LVIKTSMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLLKSQ-PYEKVDYANKTVFIV 190 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 G E G++ L ADQ I I M G VQSLNV VA+ +IL Sbjct: 191 GNENKGVSPLILKNADQSIRIDMFGDVQSLNVGVATGIIL 230 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 28/165 (16%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKT 75 R L V ++ V P NV IIR+ADAVG V GS KT Sbjct: 112 RNNSLVVVLDGVRDPGNVGTIIRSADAVGADAV-------------VLGKGSVDLYNPKT 158 Query: 76 HRTIGDAVAHL--------------KGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 R+ ++ HL + +G++++ T L + D+T T +LMG E Sbjct: 159 VRSTMGSLFHLPIIEADLAELLPEAQSKGIKLVGTSLQATHTCYT-YDWTAGTWLLMGNE 217 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G++ D+ +IIPM G +SLNV++A+ ++LYEA RQR+ Sbjct: 218 SEGLSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQRK 262 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 15/166 (9%) Query: 7 ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGV-------HEVHAVWPGSRMRT 59 + I +ML L + +E + P N+ I+R + GV + V P + T Sbjct: 120 SSISDMLTDNP--LLILVENLQDPGNLGTILRMGEGAGVTGVIMSSNTVDIYNPKTIRST 177 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 M S +VQ DAV+ K G+++ A HL E DY T L+G Sbjct: 178 MGSIFRVPFVYVQ-----DFSDAVSQCKNAGIKVYAAHLDGKNTYLGE-DYREGTAFLIG 231 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E G+T++ AD I IPM G V+SLN ++A ++ YEA RQR Sbjct: 232 NEGNGLTEDITKQADTLIRIPMQGEVESLNAAIACTILTYEAVRQR 277 >UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synechococcus RepID=Q2JVF6_SYNJA Length = 270 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 12/154 (7%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVH----EVHAVWPGSRMRTMASAAAGSNSWVQVKT 75 L + +E + P N+ ++IR A G +V P + ASA W + + Sbjct: 115 LGLVVETLQDPGNLGSLIRVVAATGADGLWLSADSVDPENPKVLRASA----GQWFR-RP 169 Query: 76 HRTIGDAVAHLKG---QGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 + + D A ++ QG+Q+LA L+ A + + D TRPT L+G E G+ + + L Sbjct: 170 PQVLSDLPAWIQSCRRQGIQVLAATLAPLATCYWDHDLTRPTLFLLGNEGAGLQESTIQL 229 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 AD + IPM V+SLNV++ L+LYEA RQ++ Sbjct: 230 ADAQVRIPMAAGVESLNVAMTGGLLLYEALRQQR 263 >UniRef50_B0VI64 Putative tRNA/rRNA methyltransferase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI64_9BACT Length = 269 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 2/143 (1%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHE--VHAVWPGSRMRTMASAAAGSNSWVQVKTHR 77 +TV + + NV ++ RTA+ +G+ + V + P M A G+ V + Sbjct: 119 ITVICDNLRSVFNVGSLFRTAECLGIGKIIVCGITPTPEHSNMPKTAMGTEKLVAWQYFP 178 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + +A+A +G I A DNA + Y P I++G E GI L L D+ I Sbjct: 179 STTEAIAFCHQEGFFIYALETIDNAKSVFQTVYQFPLAIVIGNEALGIESSILELCDEFI 238 Query: 138 IIPMIGMVQSLNVSVASALILYE 160 +P +G SLNV VA+ ++LY+ Sbjct: 239 TLPQLGWKNSLNVGVATGIVLYQ 261 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 11/155 (7%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAGSNSWV 71 +P L + ++ V P N+ A R ADA+GV + +AV + +R +A A S +V Sbjct: 96 KPLLFLILDGVVDPQNLGACFRVADAMGVDALICPKDNAVGLNATVRKVACGGAESVPFV 155 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNA-VDFREIDYTRPTCILMGQEKTGITQEAL 130 V + + +LK + + T DNA ++ ++ ++MG E G+ + Sbjct: 156 VVTN---LARTIRYLKNSNVFVYGT--DDNANKSLQKTNFKGSIALVMGSEGKGMRRLTN 210 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 L D IPM+G V+SLNVSVAS + LYE RQR Sbjct: 211 ELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 7/165 (4%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TMASAAAGSNS 69 +L R L V ++ + P N+ IIRTADA + V + + + A+AG+ Sbjct: 110 LLQGRGTPLVVVLDGLQDPGNLGTIIRTADACELQGVITLEGTVDLFHPKVVRASAGALF 169 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFR--EIDYTRPTCILMGQEKTGITQ 127 + + G G+Q ++D D+ E D++RPT + MG E G + Sbjct: 170 HLPAFGDLPAPAVLEFFTGAGVQ---KFVADPRGDYSLYECDFSRPTALFMGNEARGCGE 226 Query: 128 EALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 A AD+ + IPM G +SLNV VA++L +YEA RQR + + L Sbjct: 227 MLHAAADRVVAIPMPGQAESLNVGVAASLFIYEAVRQRLKSSLSL 271 >UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selenomonas RepID=C4V3B4_9FIRM Length = 276 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 9/156 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAGSNSWVQVK 74 L + +++V P NV I+RTADA G V A GS++ AA GS ++ Sbjct: 125 LYLALDRVQDPGNVGTILRTADAAGASGVILLRGCADVYGSKV---VRAAMGSLFYLPFV 181 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 T D V K + A + V + +RP+ +++G E G++ E L A Sbjct: 182 TGVDEEDLVRFAKENVLCFYAAACDTDGVTHFAAELSRPSLVVLGNEANGVS-ERLLRAG 240 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 Q + +PM G +SLNV+ A+ ILYEA RQR+ AG+ Sbjct: 241 QHLYVPMCGRAESLNVAAAATAILYEAIRQRKYAGI 276 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 2/150 (1%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTH 76 P + +E + KP N+ I+R+ADA GV V + + + + + + T Sbjct: 118 DPPFLLIVEAIEKPGNLGTILRSADAAGVDAVICCDSVTDLFNPNAVRSSTGVLFSMPTV 177 Query: 77 RTIGDAVAH-LKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 D V ++ +G++ +AT + + + + D P I+MG E+ G++++ L+ D Sbjct: 178 TASSDEVIKWIRQKGIRTIATTPHTDIL-YTDTDLRGPLAIVMGSEQFGLSEKWLSACDT 236 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++IPM G SLNV++A+ + L+EA RQR Sbjct: 237 KVLIPMAGQADSLNVAMATLITLFEAVRQR 266 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 7/154 (4%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQ 72 P L + ++ V P N+ A++R+AD GV V + P R +++ A AG+ ++ Sbjct: 96 HPHLLLALDGVEDPQNLGALLRSADGAGVDGV--LLPERRSAPLSAVAVKTSAGAAEHIR 153 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 + + A+ LK Q + + + + D+T P+ +++G+E G+ Sbjct: 154 IARVVNLVRALEQLKEQNIWCVGLD-ERGTMSYDAYDWTTPSVVVLGREGEGLHDLVRKT 212 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + IPM G V SLNVS A A++LYEA RQR+ Sbjct: 213 CDHLVRIPMAGGVSSLNVSAAGAVVLYEAARQRR 246 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 11/158 (6%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP----GSRMRTMASAAAGSNSW 70 + +P V + + PHN+ A++R+A G H + V P S T+ ++AG+ Sbjct: 111 KGEPPFLVLSDGIEDPHNLGAVMRSALLCGAHGI--VIPKRGGASVTPTVIKSSAGAAER 168 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 + V IG+ + LK QG+ + + + V R+ + T P +++G E +G++Q Sbjct: 169 LPVARVANIGETIRRLKDQGVFVYCADM--DGVPLRKNNLTGPIALVLGSEGSGVSQLVK 226 Query: 131 ALADQDIIIPMIGM---VQSLNVSVASALILYEAQRQR 165 L D + + M V S NVSVA+ +ILYE Q QR Sbjct: 227 KLCDGVVRLDMAAQGTGVDSFNVSVAAGIILYEIQSQR 264 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 7/152 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKT---- 75 L V ++++ N +IIRT+ VG + + P + S + ++S K Sbjct: 99 LLVILDRITDVRNFGSIIRTSACVGADAI--IIPKKYTAMIGSDSIKTSSGALFKVPICQ 156 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + I + + L G++I++ N + + ID++ PT +++G E+ GI+ + L ++ + Sbjct: 157 EKNIKNTIEFLMNSGLKIVSATEKSN-IYWYNIDFSGPTALILGNEEKGISPKYLEISCE 215 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IP I + SLNVSVA +ILYE RQR++ Sbjct: 216 KAKIPAIKGISSLNVSVACGVILYEVFRQRKS 247 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 3/150 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKT 75 + + + + + P N+ IIRTADA G + + + A S + Sbjct: 103 KDKGIYIIADNIQDPGNLGTIIRTADAFGASAIFTINNCVDVFNPKVLRASMGSIFHIPV 162 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 T + LK +G+++ ATHL + E + + ++G E G++ + L D Sbjct: 163 IVTASQILLKLKQRGIKVFATHLKARKL-VHECNISDKVAFVLGNEAKGVS--VVDLVDD 219 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IPM G +SLNVS+A+ + LYE+QRQR Sbjct: 220 FVKIPMTGEAESLNVSIAAGIFLYESQRQR 249 >UniRef50_Q0BY95 RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BY95_HYPNA Length = 271 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 2/150 (1%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTI 79 L + + +V P N+ I+RTAD GV V + + + A S V T Sbjct: 123 LYIALYEVRDPGNLGTILRTADCAGVSGVILIGTCCDPYSFEAVRASMGSVFDVPFAHTD 182 Query: 80 GDAVAHL-KGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 DA KG+GM + A + + V D+T + ILMG E+ G+ A D + Sbjct: 183 FDAFNTWRKGEGMSLTAASV-NGTVRHDGADFTGGSIILMGNEQAGLPDWVEAACDTLSL 241 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQNA 168 IPM G SLN++ ASAL++YEA RQR A Sbjct: 242 IPMRGGADSLNLAQASALMIYEAWRQRGYA 271 >UniRef50_C1F3I9 RNA methyltransferase, TrmH family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3I9_ACIC5 Length = 283 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 6/151 (3%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM---RTMASAAAGSNSWVQVK 74 P L + + P N+ +IR+A+A G + + PG+ + A+AGS + V Sbjct: 129 PALLLVTASLQDPGNLGTLIRSAEAFGASGILTL-PGTVNLWNAKVVRASAGSVFRMPV- 186 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 R + +A L QG+ + AT +D + + T+P +L+G E G+T L AD Sbjct: 187 VARCEEEVLARLAAQGVTLFATT-ADGDLPATQAALTQPCALLIGNEGAGLTPHLLQAAD 245 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IP G V+SLN ++A +++LYEA RQR Sbjct: 246 ARLAIPTPGPVESLNAAIAGSILLYEASRQR 276 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 7/152 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAGSNSWVQVKT 75 + ++ V PHN+ A +R+A+A GV V + P T+ A+AGS S V V T Sbjct: 94 FLLVLDGVLDPHNLGACLRSAEAAGVDAV--ILPRDNACPVNATVRKASAGSASRVPVCT 151 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + ++ L+ G ++ + + +D P ++MG E+ G+ + D Sbjct: 152 VTNLSRTLSSLQEAGFWLVGMA-GEGSRSLYALDLDMPLVMVMGGEEKGLRRLTREHCDY 210 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IPM+G ++SLNVSVA+ + L+EA RQR+N Sbjct: 211 LAHIPMMGAIESLNVSVATGICLFEAARQRRN 242 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 7/150 (4%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQVKTHR 77 + + + PHN+ AIIRTA+A+G + V P R T+A AAG+ V Sbjct: 222 LAADGITDPHNLGAIIRTAEALGAQGL--VVPQRRAVGITSTVAKVAAGALEHFAVARVV 279 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + A+ LK G I + A ++++ P +++G E TG++ A DQ + Sbjct: 280 NLNQALEQLKAAGFWIYGM-AATAAKPIYSVEFSGPVVLVVGAEGTGLSLLAQRYCDQLV 338 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IP++G SLN SVA+ + LYE RQR + Sbjct: 339 SIPLLGKTPSLNASVATGMALYEIFRQRSS 368 >UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria RepID=Q11C30_MESSB Length = 286 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 9/150 (6%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRT 78 DL V +++V P N+ IIRT DAVG V V + ++ + A S V R Sbjct: 130 DLWVALDRVRDPGNLGTIIRTVDAVGARGVILVGECTDPFSVETVRATMGSVFSVPLARA 189 Query: 79 IGDAVAHLKGQ----GMQILATHLSDNAVDFREIDYTR-PTCILMGQEKTGITQEALALA 133 D A L + G+ + THL +VD+R +DY+ P +LMG E+ G+ + Sbjct: 190 --DEAAFLAWREHFAGLMV-GTHLK-GSVDYRNVDYSGGPVLLLMGNEQQGLPDKLAEAC 245 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQR 163 D+ + IP G SLN++VA+ ++LYE +R Sbjct: 246 DRLVRIPQAGRADSLNLAVATGVMLYEIRR 275 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 11/153 (7%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAGSNSWVQVKT 75 L + ++ + PHN+ A IR+ADA GVH + + P R T+ A+GS+ V Sbjct: 98 LLLVLDGITDPHNLGACIRSADAAGVHMI--IVPRDRSANVNATVRKVASGSSDRVPFVR 155 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDF--REIDYTRPTCILMGQEKTGITQEALALA 133 + + LK + I+ + L N + F R ID P ++MG E +GI + Sbjct: 156 VTNLSRTLKLLKKYNIYIVGSVLRSNQILFNTRLID---PIALVMGSESSGIRRLTRENC 212 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D+ + IP + SLNVSVA+ + L+E RQR+ Sbjct: 213 DKLVHIPTLQSTVSLNVSVATGIFLFETVRQRK 245 >UniRef50_D1AKE9 tRNA/rRNA methyltransferase (SpoU) n=17 Tax=Fusobacteriaceae RepID=D1AKE9_SEBTE Length = 256 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWPGSRMRT 59 Y+++ + D+ V ++ V P N+ IIRT +A G + V+ +R Sbjct: 94 YSKLLTSIEEIDGDV-VILDDVQDPGNIGTIIRTMEASGFKNLILTKGSVDVYNPKTVRA 152 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 SN + T LK Q+++T L N++D+R+++ + G Sbjct: 153 TMGGIFKSNIIYETPERIT-----EFLKDNNYQVISTLLDKNSIDYRDVELKEKNAYIFG 207 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 E GI+ + D IIP+ G V SLNVSVAS + LY+ + + +N Sbjct: 208 NEGHGISDIFIESTDIKAIIPIYGDVDSLNVSVASGIFLYKMREKIEN 255 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 13/160 (8%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGV-------HEVHAVWPGSRMRTMASAAAGS 67 + +P + ++ + P N+ AIIRTA+ GV H+ V P T++ +AG+ Sbjct: 91 KEKPPFLLLLDGIEDPQNLGAIIRTAECAGVDGIIIPSHKSAEVNP-----TVSRVSAGA 145 Query: 68 NSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQ 127 + + + + + +LK +G +L F PT +++G E GI + Sbjct: 146 VEHMAIIRENNLVNTIKYLKQEGFWVLGADAKARQSYF-NTSIPSPTALVIGGEGQGIRR 204 Query: 128 EALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 D + IPM G + SLN SVA+AL++YE RQR N Sbjct: 205 LVRENCDILVRIPMFGQLNSLNASVAAALLIYEVLRQRLN 244 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 12/164 (7%) Query: 10 CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV------HAVWPGSRMRTMASA 63 E L R + + + + V P N+ I+R+A+A G V + W +R +S Sbjct: 127 LEDLLRAENPMLLGVAGVQDPGNLGTILRSAEAFGATGVLIGDKTASPWNPKVIRG-SSG 185 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 + V+V+ A+ L+ +G+QILAT S E+D+T PT +L+G E Sbjct: 186 SVFRLPVVKVEWPA----ALEQLRAKGVQILATS-SHKGEPLPEVDFTGPTIVLIGGEGA 240 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 G+ ++ LA D + IP V+SLN +A+++++YEA RQR Sbjct: 241 GVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQRNT 284 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 9/170 (5%) Query: 2 NPTRYARICEM----LARRQPD--LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 +P A + E+ LA P+ + + ++++ P N+ +IRTADA+G V + + Sbjct: 88 DPQSVAALVELRREELAAFAPERGMVLVLDRIRDPGNLGTLIRTADALGAAGVVLLENTA 147 Query: 56 RMRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + + GS + V T G+ + G + AT L + A D + + Sbjct: 148 DLYNPKVVRSTMGSLFHLPVFTGVKTGELEEWCRQHGYALWATAL-EGAEDMTRLTWPEK 206 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 T +++G E G++ E LA ADQ + IPM G +SLNV+VA ++++EA R Sbjct: 207 TALVLGSEAEGVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAAR 256 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 14/171 (8%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGS 55 +N T + E A P L + +++V PHN+ AI+RTADA GV V ++V + Sbjct: 79 LNETDLKALLE--AESNP-LFLFLDEVQDPHNLGAILRTADATGVTAVVIPKHNSVGVNA 135 Query: 56 RMRTMASAAAGSNSWVQVKTH-RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +R +A AA + V V RTI + L+ G+ + N + ++D+ Sbjct: 136 TVRKVACGAAETVKVVVVSNLVRTIKE----LQQAGLWVTGLAGETNTTLY-QLDFKGAV 190 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++MG E +G+ + D IPM G ++SLNVSVA+ ++LYE RQR Sbjct: 191 GLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQR 241 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 9/171 (5%) Query: 3 PTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 P RY ++LA+ +P V ++ + PHN+ A+IRTA A G + + P R M Sbjct: 77 PFRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALIRTAYAAGCDGI--IIPERRAAQM 134 Query: 61 A----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 AAG+ ++ V + + K G+ + + +V + DY T + Sbjct: 135 TPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDGESV-YTTGDYQGGTVL 193 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 ++G E G+ + D + +PM G V SLN SVA AL++YE RQR+ Sbjct: 194 VIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEVYRQREG 244 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 14/168 (8%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVH-------EVHAVWPGSRMRTMA 61 I E+ + +L V +E + P N+ ++RT + GV V P + TM Sbjct: 102 IDELFKGDKTELLV-LESIQDPGNLGTMVRTGEGAGVSGIIMNRTTVDIFNPKTVRSTM- 159 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 GS V + + + + K +G+ + A HL + DYT ++G E Sbjct: 160 ----GSLYRVPFYITDDLPETIEYAKSKGVSLYAAHLK-GKCSYDRPDYTGACGFMIGNE 214 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 G++ E +AD I IPM G V+SLN ++++ L++YE RQR+ G Sbjct: 215 GNGLSDEIADMADTYIRIPMEGAVESLNAAISATLLMYECNRQRRLLG 262 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 3/148 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHR 77 L + ++ V PHN+ A +RT DA GV + S T+A A+G+ V V Sbjct: 99 LYLVLDHVQDPHNLGACLRTCDAAGVKGLVVTKDQSVGLTPTVAKVASGAAETVPVYRVT 158 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + + K +G ++ + E+D P ++MG E G+ + D + Sbjct: 159 NLARCLDRFKQRGYWVVGAA-GEAERTLYELDLRLPLVVVMGAEGVGLRRLTRERCDFLL 217 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQR 165 IPM+G V+SLN+SVA+ ++LYE RQR Sbjct: 218 RIPMVGGVESLNLSVATGIVLYEVMRQR 245 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQVKT 75 L + +E + PHN+ AI+R+A+A+G H + + P R ++A AAG+ + V Sbjct: 285 LLMAVEGLTDPHNLGAIVRSAEALGAHGL--ILPQRRNAGLTGSVAKVAAGALEHLPVAR 342 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + ++ LK +G +I+ ++ V E D P I+ G E G++ DQ Sbjct: 343 VVNLNRSLDILKDKGYRIVGL-ATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQ 401 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQ 164 I IP+ G SLN SVASAL+LYE R+ Sbjct: 402 LIRIPLRGATPSLNASVASALMLYEVARR 430 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 13/151 (8%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEV-------HAVWPGSRMRTMASAAAGSNSWVQVK 74 V ++ + P N IIRTADA G+ V P TM GS + + Sbjct: 119 VILDCLQDPGNAGTIIRTADAAGISAVLMSKGCVDLYSPKVLRSTM-----GSVFHIPIF 173 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 I + + LK +++A+HLS F+E D T + I++G E GI+ E +AD Sbjct: 174 EGLNITEIIRVLKQNDYKVIASHLSGKNNYFQE-DLTGRSAIIVGNEANGISDETAYMAD 232 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IPM G +SLN SVA+++++YE RQ+ Sbjct: 233 SLVKIPMPGKAESLNASVAASVMIYEIVRQK 263 >UniRef50_D1CFS4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFS4_THET1 Length = 266 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 78/155 (50%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSW 70 E + R+ + ++ V P N+ +I+RTADAVGV V + S AG+ + Sbjct: 109 ESIDPREGLCLLALKAVQDPGNIGSILRTADAVGVRYVILLGDSVDPYDPNSVRAGAGAT 168 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 VK +T + + K + + +++ ++Y P +LMG E+ G+ Sbjct: 169 FTVKLIKTSFERLLDWKNIHQIPVIGAVGGAPLNYSRVNYPYPCILLMGSERQGLDLREQ 228 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D + +PM+G V SLN++VA+++ILYE QR Sbjct: 229 SSCDMLVSVPMVGKVDSLNLAVATSVILYEIFDQR 263 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV---HAVWPGSRMRTMASAAA 65 + LA L + ++ + PHNV AI+R+AD V V H G T+ +A Sbjct: 121 LLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGG-TETITRVSA 179 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ +WV + R + LK G + ++ A+ R + T +++G E G+ Sbjct: 180 GAVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEAIGART--FPPKTALVLGNEGHGV 237 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 + D I IP G V SLNVSVA+ ++LYE +R +Q+ R+N M Sbjct: 238 SPLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQSPYSVQRQNEM 289 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 8/162 (4%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAA 64 I ++ R P L + + + PHN+ A+IR+A+A G + + P R T+A A Sbjct: 174 IASLVERPDPVL-LAADGIEDPHNLGALIRSAEAFGFQGI--ILPQRRAVGVTATVAKVA 230 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 AG+ + + + A+ LK G Q++ T + + E+ P +++G E G Sbjct: 231 AGAVEHLPIARVTNLNQAIERLKEAGYQVVGTQEKASQALY-ELKLDGPLVVVVGSEGKG 289 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I+ D + IP+ G SLN SVA ++LYE RQR+ Sbjct: 290 ISLLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMRQRR 331 >UniRef50_A6KZH0 tRNA/rRNA methyltransferase n=10 Tax=Bacteroidales RepID=A6KZH0_BACV8 Length = 178 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 10/148 (6%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVH-----AVWPGSRMRTMASAAAGSNSWVQVK 74 L V +++V HN+ ++ RT+DA V ++ A P M A A S W + Sbjct: 25 LAVVLDEVRSLHNIGSVFRTSDAFLVDCIYLCGITATPPHPEMHKTALGAEYSVEW---R 81 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNA--VDFREIDYTRPTCILMGQEKTGITQEALAL 132 + DAV L QG +LA + + +D E+D + I+MG E G+ QE + Sbjct: 82 YKKNTLDAVQELHDQGFTVLAIEQVEGSTLLDKLELDADKKYAIVMGNEVKGVQQEVVNA 141 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYE 160 D + IP G SLNVSV + +IL+E Sbjct: 142 CDGCVEIPQYGTKHSLNVSVTTGIILWE 169 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 14/147 (9%) Query: 24 MEQVHKPHNVSAIIRTADAVGVHEVHAV------WPGSRMRTMASAAAGSNSW-VQVKTH 76 ++ V P N+ I RTADA G + V W +R A +W ++T Sbjct: 113 LDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLPAWETDLETV 172 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 R A L G + + AT L ++ VD R++D R +++G E GI+ EALAL + Sbjct: 173 R------ALLDGADIPLYATALREDTVDVRDVDLKR-AAVVIGSEGRGISDEALALCRRT 225 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQR 163 I IPM +SLN ++A+ ++L+E R Sbjct: 226 IKIPMRARCESLNAAMAAGVVLWEMCR 252 >UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA Length = 260 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--SRMRTMASA 63 + + CE + Q + V ++Q+H P N I+R+ A V V S T+ Sbjct: 97 FNQFCEKIKNEQQGIVVVLDQIHDPGNFGGILRSCLAANVLGVIFKKDNQVSINNTVIKT 156 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQ-GMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + G+ ++ + + A+ L+ + G ++LSD A D+ +DY + +++G E+ Sbjct: 157 SLGACFYLNLIEVANLSYAIKDLQEKYGFWSYVSNLSDQAQDYN-VDYANKSILIVGNEQ 215 Query: 123 TGITQEALALADQDIIIPMI-GMVQSLNVSVASALILYEAQRQ 164 G++ + + AD I IPM +QSLNVSVA+ ++L+ +++ Sbjct: 216 KGVSSQLIKNADYQIKIPMYTDKIQSLNVSVATGIMLFNMKQK 258 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 5/162 (3%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG-SRMRTMAS-A 63 YA + + P L V ++ + N+ AIIR A+A+G + G S + + A+ + Sbjct: 108 YADFEGLFQAQLPALLVILDGIQDSFNLGAIIRCAEALGAGGIVLPEKGQSGVNSQAARS 167 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILA-THLSDNAVDFREIDYTRPTCILMGQEK 122 +AG+ +++ + + A+ LK +GM+ILA T S+ ++ + P C+++G E Sbjct: 168 SAGAVNFLPIYRVPALDRAIDQLKSRGMKILAATEKSEQSL--WNVVIPAPLCLIIGNEG 225 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 G++ L+ D + IPM G SLN +VA+ ++L E QRQ Sbjct: 226 KGVSSALLSACDIQVRIPMAGQTSSLNAAVAAGILLAEIQRQ 267 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 11/150 (7%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEV------HAVWPGSRMRTMASAAAGSNSWVQVKT 75 + ++ + P NV +IRTADA G+ V ++ +R+M GS+ + V Sbjct: 114 LLLDNIQDPGNVGTMIRTADAAGLAGVILGKGTADIYNTKVLRSMQ----GSHYHLPV-L 168 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 R + + V K QG+ + T L++ A+ + E + +++G E +G++ E LA + Sbjct: 169 QRELTEVVQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTK 228 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++ IPM G +SLNV++A+ ++++ Q + Sbjct: 229 NLYIPMKGQAESLNVAIAAGVLMFYFQNNQ 258 >UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZL1_HERA2 Length = 266 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 2/146 (1%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81 V + V P N+ AI+RT DAVG + + + A+ A S ++ RT D Sbjct: 120 VALNGVGNPGNLGAIMRTCDAVGCEGLILIGDTTDPYHPAAIRASMGSLFALRMVRTTFD 179 Query: 82 AVAHLK-GQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 A K G ++ T D +++ I Y P +LMG E+ G++ ++ D + IP Sbjct: 180 EFAAWKQTNGYHVIGTT-PDVEQEYQTISYPSPAILLMGSERLGLSVGEQSVCDTLVRIP 238 Query: 141 MIGMVQSLNVSVASALILYEAQRQRQ 166 M G SLN+ VA++++LYE RQ++ Sbjct: 239 MAGTCDSLNLGVATSIVLYEMFRQQR 264 >UniRef50_D2R809 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R809_9PLAN Length = 177 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 3/133 (2%) Query: 32 NVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGM 91 N+S I RTA G+ ++ A G +T+A A ++++ HRT+ + L+ +G Sbjct: 44 NLSNIARTASCCGLTKIVACGQGKLDKTVARDGADE---LEIEVHRTLLPVLKELRKEGW 100 Query: 92 QILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVS 151 + A + ++V+ E + R +++G E+ G++ E L+L + + IP+ G+ S NV+ Sbjct: 101 FLAALEQTTDSVNMHEYQFPRKVALVIGNERHGLSDEELSLMNVCLEIPVWGLPHSYNVA 160 Query: 152 VASALILYEAQRQ 164 A+A+ LYE RQ Sbjct: 161 NATAMALYEYCRQ 173 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 5/164 (3%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV--HAVWPGSRMRTMASAAAG 66 + E + + V ++++ PHN +IIR+A G H + A T+ A+AG Sbjct: 84 LLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHGIITEARNSCPITPTVEKASAG 143 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDF-REIDYTRPTCILMGQEKTGI 125 + ++V + + LK +G+ + A +NA F + D+ P CI++G E GI Sbjct: 144 AIEHIKVARVVNLRRTIDSLKEKGVWVYAA--DNNAEKFVYDCDFKIPICIIIGSEGKGI 201 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 ++ AD + IP G + S N SVA+ +I +E +QR G Sbjct: 202 SRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQRMQEG 245 >UniRef50_B4WGZ3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=B4WGZ3_9SYNE Length = 213 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 18/189 (9%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----------RTMASAAA 65 R +L +E + N+ IIR +A+GV + + V P + R ++ + Sbjct: 22 RCKNLIAVIENPNDIKNIGTIIRNVNALGVEKAYIVDPKKALPDDWQEMREKRALSKTSV 81 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILAT--HLS--DNAVDFREIDYTRPT--CILMG 119 + W VK + + HL+ + T HL NAV E DYT T + G Sbjct: 82 SAIKWSFVKRFDSTAACIDHLEQNRFVSIVTSPHLKGRKNAV-LDEADYTIYTKLAVWFG 140 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN-AGMYLRENSML 178 E GI+ A+ +D + IPM GM++SLN+ S ++LYE +QR+ Y N+ Sbjct: 141 NESMGISDLAVEHSDLCVSIPMFGMIESLNLGTTSGIVLYEITKQRREYQHQYRWRNNRG 200 Query: 179 PEAEQQRLL 187 P+ +R L Sbjct: 201 PKLNNERSL 209 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 7/158 (4%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSN 68 + + D + ++ + P N AIIR+A+ G H + P R ++ ++G Sbjct: 75 IFKDGSDKVLILDHIQDPQNFGAIIRSANVFGFK--HIIIPKDRACDVTPSVLKTSSGGF 132 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 V+V ++ DA+ LK +G I A+ L+ A + + I++G E +G+++ Sbjct: 133 KNVKVIKVNSLFDAIEELKNKGFWIYASALNQQAKKLNDAKFNEKIAIIVGNEGSGVSKT 192 Query: 129 ALALADQDIIIPMIG-MVQSLNVSVASALILYEAQRQR 165 L +D+ I I VQSLNVSVA+ ++LY ++ Sbjct: 193 LLKHSDEIIYIEQDKESVQSLNVSVATGILLYTVFNKK 230 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 8/157 (5%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS---RMRTMASAAAGSNSW 70 A + P + ++Q+ N AIIRTA+ GV+ + GS T+ ++A + Sbjct: 93 AEKVP-FFLILDQLSDVRNFGAIIRTAECTGVNGIIIQKNGSAPVNAETIKTSAGAAFKM 151 Query: 71 VQVKTHRTIGDAVAHLKGQGMQ-ILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 K I DA+ L+ ++ + AT +D+++ ++++ +P I+MG E G+ Sbjct: 152 PICKVDH-IKDALFILQASNIKTVAATEKTDSSI--YDVNFNQPIAIIMGSEHRGVNPSV 208 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 L + D +P+ G ++SLNVSVA + LYE RQR Sbjct: 209 LKMVDYKAKLPLSGNIESLNVSVACGVFLYETVRQRS 245 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV------WPGSRMRTMASAAAGSNSW 70 P V +++ P N+ IIR A+A G V + +R A+AGS + Sbjct: 108 NPTFIVIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALR----ASAGSIFF 163 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 + V T+ + + G+ ++ T L F +D+T+P I+ G E G++Q+ Sbjct: 164 LPV-IKVTVKEIEEFVSKYGLNLVITDLKATISSFN-MDFTKPLAIVFGNESKGVSQDLR 221 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 A+ IP G +SLNV++A+ ILYE RQR Sbjct: 222 AIKHTSCKIPHKGKAESLNVAMAATAILYEILRQR 256 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 6/148 (4%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIG- 80 + E + KP N+ I+R +DAVG+ + + + A + V + G Sbjct: 130 IVAEAIEKPGNLGTILRCSDAVGLDALIVCDACTDIHNPNVVRASVGTLFTVPVIESQGA 189 Query: 81 DAVAHLKGQGMQILAT--HLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + LK +G+ ILA H D ID T P I +G E+ G++ + + AD + Sbjct: 190 ETLQWLKQKGISILAATPHAKQELAD---IDLTGPLAIAVGTEQLGLSPQWMEQADIQVR 246 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQ 166 IPM G+ SLNV++A+ ++LYEA RQR+ Sbjct: 247 IPMYGIADSLNVAMATTILLYEALRQRK 274 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 7/153 (4%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA----SAAAGSNSWVQV 73 P L + ++ V PHN+ A +RTADA G V + P + T+ A G+ + + Sbjct: 96 PPLILVLDGVTDPHNLGACLRTADAAGATAV--IVPKDKSATLTPVVRKVACGAAEVIPL 153 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + + L+ +G+ ++ T + + + D T P ++MG E G+ + Sbjct: 154 VAVTNLARTLEKLQQRGLWVVGTA-GEAEQEIYQQDLTGPLVMIMGAEGKGMRRLTREHC 212 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + +PM G V SLNVSVA+ + L+EA RQRQ Sbjct: 213 DFLVKLPMAGSVSSLNVSVATGVCLFEAVRQRQ 245 >UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3 Length = 274 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 7/150 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEV----HAVWPGSRMRTMASAAAGSNSWVQVKT 75 L + +E++ P N+ I+RTA A GV + V P S + ++AGS+ + + Sbjct: 121 LGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSP--KVLRSSAGSSLLLPQQQ 178 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 +++ + QG+Q++AT + EID+ RPT ++ G E G++ L L Sbjct: 179 LQSLPPLLEKFHTQGLQLIAT-VPQATQTLWEIDFQRPTIVIFGSEGQGLSAPVLELTTH 237 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IP V+SLNV++A ++LYEA+RQ+ Sbjct: 238 QVAIPQAPQVESLNVAIAVGVMLYEARRQQ 267 >UniRef50_D2NQI2 rRNA methylase n=54 Tax=Actinomycetales RepID=D2NQI2_9MICC Length = 253 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 3/156 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSN 68 I L R+ D V +E N+ ++RTA+A+ EVH + R R A ++ Sbjct: 93 IIADLDTRRHDFHVAIENWQHDLNIGTVVRTANAMLAKEVHII---GRRRWNRRGAMVTD 149 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + V+ H TI D VA +G+G++I+ + ++V D + ++ GQE G+++E Sbjct: 150 RYQHVRHHPTIEDFVAWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEE 209 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 A A + I G +S+N + A+ + ++ R+ Sbjct: 210 LHAAARDTLSIEQFGSTRSMNAATAAGIAMHAWVRR 245 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%) Query: 6 YARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASA 63 YA + +++A R++P L V ++ V PHN+ AI+R+A +G V + P R ++ Sbjct: 95 YAALEDLIAAPRQRPALFVALDSVTDPHNLGAIVRSAHVLGADGV--ILPKDRAAQVSGV 152 Query: 64 ----AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 +AG+ + + + A+ LK + I + A D T C+++G Sbjct: 153 VTKVSAGATEQIAIAQVTNLARALEQLKQAEVWIAGLAAGEGATSLPAFDATGALCLVLG 212 Query: 120 QEKTGITQEALALADQDIIIPMIGM-VQSLNVSVASALILYE 160 E TG+ D I IPM+G V SLNVSVA+ + LYE Sbjct: 213 AEGTGLRPLVARTCDFLIEIPMLGAGVGSLNVSVAAGVALYE 254 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 11/151 (7%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWPGSRMRTMASAAAGSNSWVQVKT 75 + ++ V P N+ I+RTADA G V ++ +R+M GS+ + V Sbjct: 111 IVLDAVQDPGNLGTIVRTADAAGFDAVVLGTGTVDLYNDKVLRSMQ----GSHFHIPV-F 165 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + + + LK +G+Q+ T L ++ D+ + I++G E G++ + + LAD Sbjct: 166 QANLQEYLPILKEKGVQVAVTALHRDSKDYSVLQGATDVAIVVGNEGQGVSDDVIDLADV 225 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 + IP+ G +SLNVS+ASAL++Y+ + ++ Sbjct: 226 VVTIPIFGKAESLNVSIASALLMYKTKETKE 256 >UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03G93_PEDPA Length = 255 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 5/141 (3%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS---RMRTMASAAAGSNSWVQVKTHRT 78 + ++ V P N+ ++RTADA G V G+ + A GS +Q+K Sbjct: 113 LVLDNVQDPGNIGTMVRTADAAGFTGV-VFGDGTADFYNPKILRAMQGSQYHLQLK-RLN 170 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + K QG I + L +NA D+R+ID ++MG E G+++ + + D ++ Sbjct: 171 LEKWIRNCKDQGSVIFGSILDENARDYRKIDVPDQFSLIMGNEGNGMSERLIEMTDMNLY 230 Query: 139 IPMIGMVQSLNVSVASALILY 159 IP+ G +SLNV+VA+ ++++ Sbjct: 231 IPIKGSAESLNVAVAAGVLMF 251 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 15/170 (8%) Query: 3 PTRYARICEM-LARRQPD--LTVCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWP 53 P + EM + + Q D L + ++ + P N+ IIRTADA GV V ++ Sbjct: 83 PQGVIAVVEMNIPKVQEDNNLIILLDAIQDPGNMGTIIRTADAAGVDAVVLGDGCVDIFN 142 Query: 54 GSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 +R A GS + + T T+ + L+ QG ILAT L D AV++ E+ Sbjct: 143 DKVIR----ATQGSIFHIPIYT-ATLEQEIHMLQTQGFTILATALHD-AVEYTEVSVHNK 196 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E GI L A+Q I IP+ G +SLNV +A+ +++Y ++ Sbjct: 197 VGLILGNEGAGIAPSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246 >UniRef50_Q6MMA4 Putative tRNA/rRNA methyltransferase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMA4_BDEBA Length = 258 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVH--AVWPGSRMRTMASAAAGSNSWVQVKTHR 77 L ++ + NV +I RTA+ +G +++ P + A G+ ++ + Sbjct: 108 LVFVLDNIRSAFNVGSIFRTAECLGAEKIYLCGYTPLPTQWKVEKTAMGTQEYLAWEEAP 167 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + + + LK +G +I+A + +A D E + PT ++G E+ G+ E L + D+ Sbjct: 168 KLLECLEELKDEGYRIVALETAASASDLFEKFESEPTAFVLGNERFGLDPEVLKIIDEVR 227 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQ 164 IIP+ G SLNV V +A+ +E RQ Sbjct: 228 IIPLRGRKNSLNVGVTAAVAGFEWMRQ 254 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS----AAAGSNSWV 71 +QP L V ++ V PHN+ AI+R+A+A G V + P R + + A+AG+ + Sbjct: 94 KQP-LLVILDGVEDPHNLGAIMRSAEAFGALAV--ILPKDRTAPLNAGAIKASAGAAERL 150 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + + A+ L+ + + ++ A +D P ++MG E +G+ + Sbjct: 151 DLIRVTNLARAIEQLQQRNVWVIGLAGEAGAPLIGTLDCKGPLALVMGNEGSGLRRLTRE 210 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 DQ IPM G V SLNVSVA+ + LYE RQR Sbjct: 211 RCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQR 244 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 5/157 (3%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNS 69 +L + L + ++ V PHN+ AI+RTAD GV V A S T+ + G+ Sbjct: 38 ILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRVSVGAAE 97 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA-VDFREIDYTRPTCILMGQEKTGITQE 128 V + + L+ +G+ I T SD E D+T P ++MG E G+ + Sbjct: 98 KVPFIQVTNLARTMKQLQSRGIWIFGT--SDKGDRGLYETDFTGPAALVMGAEGEGMRRL 155 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + IPM G + LNVSVA+ + LYE RQR Sbjct: 156 TEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQR 192 >UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococcaceae RepID=Q8DNE3_STRR6 Length = 252 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 5/148 (3%) Query: 17 QPDLT----VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQ 72 Q DL+ + +E V P NV IIRTADA G V + + ++ + + S Sbjct: 102 QADLSQGKFLFLEDVQDPGNVGTIIRTADAAGFTGVIVSDKSADIYSLKTLRSMQGSHFH 161 Query: 73 VKTHRTIGDAVA-HLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + +R A+ K + +LAT LS ++VD+RE+ ++MG E GI+ Sbjct: 162 LPIYRMTSPALLDETKKVAIPVLATTLSKDSVDYRELPSIENFVLVMGNEGQGISPLMAE 221 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILY 159 ADQ + I M G +SLNV+VA+ ++++ Sbjct: 222 SADQLVHISMKGQAESLNVAVAAGILIF 249 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 3/144 (2%) Query: 24 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQVKTHRTIGD 81 ++ + P N+ A +R+A+A GVH V GS + +AG+ + +++ + Sbjct: 103 LDSIQDPRNLGACLRSANAAGVHCVVINKNGSAPINSLVHKTSAGALNQLKIFQVTNLSR 162 Query: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141 + L+ + + ++ S N + +ID T P I+MG E +G+ + DQ IPM Sbjct: 163 TIKALQQKNIWVIGLDGSVN-ISIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQLAKIPM 221 Query: 142 IGMVQSLNVSVASALILYEAQRQR 165 G V+SLNVSVA+ + L+E RQR Sbjct: 222 QGKVESLNVSVATGVTLFEVNRQR 245 >UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJH5_9BACT Length = 282 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 23/168 (13%) Query: 18 PDLT-------VCMEQVHKPHNVSAIIRTADAVG-------VHEVHAVWPGSRMRTMASA 63 PDLT V + + P N+ A+IRTA+A G V V P + A Sbjct: 108 PDLTHHPAPLFVLADGIQSPGNLGALIRTAEAAGATGILVTVGTVDPFQPKA-----LRA 162 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 AAGS + + ++ D + L QG++++ + + + D+ +P + +G E Sbjct: 163 AAGSAFRLPIIAGSSVADELQKLYRQGVRLVTADIHGD-TPYEAFDWRQPVLLWLGSEGH 221 Query: 124 GI---TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G+ T + ++IPM G V+SLNV+VA A++LYEA+RQR+ + Sbjct: 222 GLRSLTDDFKHRLAARLVIPMEGQVESLNVAVAGAILLYEARRQRRQS 269 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 8/151 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAGSNSWVQVK 74 L + +E V PHN+ A +R+ADA GV V +A A AA S ++ ++ Sbjct: 101 LLLVLENVTDPHNLGACLRSADAAGVQAVIVPRRNAAGLTPVACRTAVGAAESLAYYEIG 160 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 ++ D L+ +G+ ++ T L + + ++MG E +G+ + D Sbjct: 161 NLASLLD---QLRDRGVWVVGTALEERSESLFTFQAPESLAVVMGAEGSGLKRLTRDKCD 217 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 Q + IPM G VQSLNVSVA+ ++L++ + QR Sbjct: 218 QLLEIPMAGEVQSLNVSVATGVMLFQVRAQR 248 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 7/151 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA----AGSNSWVQVKT 75 + V ++ + PHN+ AI RT++ G + V P +R + SA+ AG+ S++ V Sbjct: 93 VIVVLDHIQDPHNLGAIARTSEFAGASAI--VIPKARSAGVTSASFKASAGALSYIPVVR 150 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 I + + LK +G I+ L D + +++Y P +++G E G+ + D Sbjct: 151 VSNIANFLRELKKKGWFIVGADL-DTENLYNQVNYRFPLALVVGSEDEGLHRIVKESCDL 209 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 + IP G V+SLNVSVA +ILY+ + + Sbjct: 210 LVKIPSYGKVESLNVSVALGIILYKIRESHE 240 >UniRef50_C6X309 RNA methylase, SpoU family n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X309_FLAB3 Length = 197 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV--HAVWPGSRMRTMASAAAGSNSWVQV 73 ++ LTV ++ V HNV AI RTADA + +V + P R + AA G+ V+ Sbjct: 43 QKTGLTVVLDNVRSMHNVGAIFRTADAFLIEKVVLCGITPQPPHREIHKAALGATESVEW 102 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNA--VDFREIDYTRPTCILMGQEKTGITQEALA 131 T+ A+ LK + ++ + N+ + I + +++G E G++++ALA Sbjct: 103 IYVDTVSAALETLKKENYTVIGIEQTSNSQKIGDYHISKDQKYAVVLGNEVDGLSEDALA 162 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYE 160 L D + IP +G SLNVSV ++++E Sbjct: 163 LYDAFLEIPQLGTKHSLNVSVCGGIVMWE 191 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 9/153 (5%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTA-----DAVGVHEVHAVWPGSRMRTMASAAA 65 E LA + L + ++++ P N AIIR+A D + + E ++V T+ + Sbjct: 80 EELAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRIN---ETVVKTST 136 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ +V + + D + LK + + ++++ E +Y+ +++G E +GI Sbjct: 137 GAIEYVNISKVTNLSDTINKLKKLDYWVYGAA-GEASINYNEENYSNKIILVLGNEGSGI 195 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 ++ D+ I IPM G + SLNVSVAS ++L Sbjct: 196 RKKVREHCDKLIKIPMYGQINSLNVSVASGILL 228 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 13/169 (7%) Query: 5 RYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---- 56 RY + ++A R P DL + ++ + PHN+ A+IR+A G + + + P R Sbjct: 77 RYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGANGI--ILPERRAASV 134 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQIL-ATHLSDNAVDFREIDYTRPTC 115 T+ +AG+ + + + A+ LK +G I A +D +V + DY Sbjct: 135 TGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARADQSVS--DPDYQGAVG 192 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++MG E G+ D I IPM+G + SLNVSV+ +IL+E +R+ Sbjct: 193 LVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRK 241 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWV 71 R+P + V + + PHN+ AIIR+A+A+G + V P R T+A +AG+ + Sbjct: 188 RRP-VIVAADGITDPHNLGAIIRSAEAIGAQGI--VIPQRRAVGVTSTVAKVSAGALENI 244 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + +G A+ +LK I ++ A D++ P +++G E +G++ Sbjct: 245 PIARVINLGRALEYLKSNSFWIYGL-TAEAAQSIHTTDFSAPVVLVVGAEGSGLSLSVQN 303 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 L DQ + I + G SLN SVA+ + LYE RQ Sbjct: 304 LCDQLVSIELSGKTPSLNASVATGMALYEIYRQ 336 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 11/149 (7%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA----SAAAGSNSWVQVKTHR 77 + ++Q+ PHN+ AIIR+A++ G V + P R +++ +AG+ + + + + Sbjct: 92 IILDQIEDPHNLGAIIRSAESFGFDGV--IIPERRSASVSPIVYKTSAGAINNINIIMVK 149 Query: 78 TIGDAVAHLKGQGMQI--LATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 A+ +K G + LA S + +D ++D C+++G E G+++ D Sbjct: 150 NTNRAIEEIKEAGFWVYGLAGEAS-SPID--QVDLKGKVCLIVGNEGKGLSRLVRENCDI 206 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQ 164 I IPM G V SLN SVASA+ +YE RQ Sbjct: 207 LINIPMKGFVNSLNASVASAIAMYEVLRQ 235 >UniRef50_B1M5G3 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=B1M5G3_METRJ Length = 281 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 9/146 (6%) Query: 26 QVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAGSNSWVQVKTHRTIG 80 Q+ PHNV AI+RTA A GV + HA PG+ +A +A+G V T R + Sbjct: 140 QITDPHNVGAIVRTAAAFGVAGIVTTARHA--PGA-TGVLAKSASGGLEHVPFVTVRNLA 196 Query: 81 DAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 +A+ L +G + SD + RP I++G E G+ + D IP Sbjct: 197 EALIELGERGFTRVGLD-SDAPESLDALTVARPLVIVLGAEGKGLRERTRGCCDVLARIP 255 Query: 141 MIGMVQSLNVSVASALILYEAQRQRQ 166 G ++SLNVS A+A+ LY R+R Sbjct: 256 FSGAIRSLNVSNAAAITLYALGRKRD 281 >UniRef50_B9KZB6 Possible 23S rRNA methyltransferase tsnR n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZB6_THERP Length = 271 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 89/157 (56%), Gaps = 12/157 (7%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS---RMRTMASAAAGSNSWVQV 73 +P + ++++ P N+ ++R+A GVH V + PG+ + AAAG++ + + Sbjct: 114 EPLFALIVDRLQDPGNLGTLLRSALGAGVHAV-LLTPGTVDPFNPKVVRAAAGAHFHLPI 172 Query: 74 KTHRTIGDAVA-HLKGQGMQIL-ATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 T D VA + G++I+ A + A D R D+TR + +++G E GI+ E Sbjct: 173 ATL----DPVAIQREFPGLEIVVARPQALRAYDER--DWTRASAVVIGSEAHGISAELAR 226 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 LA ++ IP+ G V+SLN VA ++IL+EA RQR++A Sbjct: 227 LAADEVRIPLRGGVESLNAGVAGSIILFEAARQRRHA 263 >UniRef50_C6VPS4 rRNA methylase n=8 Tax=Lactobacillales RepID=C6VPS4_LACPJ Length = 257 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 8/153 (5%) Query: 17 QPDLT---VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS---RMRTMASAAAGSNSW 70 Q DLT + ++ V P N+ ++RTADA G V A G+ + A GS Sbjct: 107 QLDLTRPWLLLDNVQDPGNIGTMVRTADAAGFAGV-AFGTGTVDIHQPKVERAMQGSQFH 165 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 +Q+ + + V L+ QG + + L+ A + +ID ++MG E G+++E L Sbjct: 166 LQLIS-TDLDKLVDQLQAQGSPVYGSELNPQAARYLDIDAPASFGLIMGNEGNGMSRELL 224 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 A DQ++ IP+ G +SLNV+VA+ ++++ R Sbjct: 225 ARTDQNLYIPIKGQAESLNVAVAAGVLMFGLYR 257 >UniRef50_B4W7H0 RNA methyltransferase, TrmH family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W7H0_9CAUL Length = 272 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 2/144 (1%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81 V +EQV P N+ IIRTADA G V + ++ + A S V RT + Sbjct: 129 VALEQVRDPGNLGTIIRTADAAGCGGVILIGDCVDPYSVEAVRATMGSVFAVSITRTDPE 188 Query: 82 A-VAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 A +A K ++ T L D V R +P+ ILMG E+ G+T + A D ++ IP Sbjct: 189 AFLAWRKTWPGSVVGTRL-DATVSHRSAVMQKPSLILMGNEQAGLTDQLAAACDVNVKIP 247 Query: 141 MIGMVQSLNVSVASALILYEAQRQ 164 M G SLN+++A+ +++Y A + Sbjct: 248 MRGRADSLNLAIATGIMVYAATDE 271 >UniRef50_A6DS75 tRNA/rRNA methyltransferase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS75_9BACT Length = 168 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 8/159 (5%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVH-----AVWPGSRMRTMASAAA 65 E A + ++ V ++++ HNV I R ADA V V+ A P ++ A Sbjct: 10 ETEASEKVEVIVVLDRLRSAHNVGNIFRLADAANVEAVYTCGYTASPPHPKLE---KTAM 66 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G++ +V + +AV LK G ++ A D+A+D E ++ + G E GI Sbjct: 67 GTDEFVNCEHFDHSLEAVGSLKKNGYRVYAVDTIDSAIDVHEAQFSGKCAFVFGNEALGI 126 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 QE L D+ I + G S+NVS +A++L++A + Sbjct: 127 QQETLEACDEYIRLNAHGRKNSINVSNCAAVVLFQASYK 165 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 9/159 (5%) Query: 10 CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAA 65 C L +P L + ++ + PHN+ A++R+A+A+G H + V P R + A AA Sbjct: 376 CSELG--EPPLLLALDGITDPHNLGAVVRSAEAMGAHGL--VLPQRRSAGLTGSAAKVAA 431 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ + V + ++ LK G +++ ++ V ++D P ++ G E G+ Sbjct: 432 GAMEHLPVARVVNLNRSLEKLKDSGYRVIGL-AAEGDVTLMDVDLEGPLVLVTGSEDQGL 490 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 + DQ + IP+ G+ SLN SVA+AL +YE R+ Sbjct: 491 SLLTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARR 529 >UniRef50_C6QC90 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC90_9RHIZ Length = 269 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81 V +E++ P N+ I+RTADA G V V ++ + A S V + Sbjct: 124 VALEEIRDPGNLGTIVRTADATGCAGVILVGTTCDPYSLDAVRATMGSIFAVPIVKMERS 183 Query: 82 AVAHL-KGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 A L + ++ THL+ DFR + Y P I+MG E G++ EA A + + IP Sbjct: 184 AFISLQRAWAGDVIGTHLTARE-DFRSL-YREPQLIVMGGEGPGLSSEAAASCTKLVKIP 241 Query: 141 MIGMVQSLNVSVASALILYE 160 M G + SLN++VA+ L+LY+ Sbjct: 242 MAGKLDSLNLAVATGLMLYQ 261 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 6/167 (3%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----M 57 +P Y +L + + ++ + P N++ ++RTA+A GV V V P R Sbjct: 83 SPYPYVDFATLLDPAPESIVLLLDHLQDPQNIATLLRTAEAAGVRGV--VLPERRAAGIT 140 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 + +A+AG+ +Q+ + AV L+ G I+A NA P +L Sbjct: 141 PAVVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVALEPGPNAQSLFRAPLPLPLVLL 200 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 +G E G++ L AD +IIPM+G ++SLN +VA ++ LYE R+ Sbjct: 201 VGAEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSIALYEIVRR 247 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%) Query: 11 EMLARR----QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA----S 62 E+L ++ QP + M++++ P N A++RTA GV+ V + P R ++ Sbjct: 82 ELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAGVNGV--IMPDKRSSPLSPAVSK 139 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A+AG+ + V + ++ +LK QG+ + + E D T P +++G E Sbjct: 140 ASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASGTVW-EADLTGPAAVVVGNEG 198 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+ DQ + IP G + SLN SVA AL +YE RQR+ Sbjct: 199 KGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMRQRR 242 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 12/168 (7%) Query: 6 YARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----M 57 YA + +ML + + + ++ + PHN+ AIIRTA+ G H V + P R Sbjct: 100 YAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTANQAGAHGV--IIPKRRAVGLT 157 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+A +AG+ ++ V + + LK +G+ + + + + +++ P ++ Sbjct: 158 ATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADMDGDVM--YDVNMKGPIGLV 215 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G+ + D IPM G + SLN SVA+ ++ YE RQR Sbjct: 216 IGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQR 263 >UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNZ0_9FIRM Length = 237 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS----A 63 RI + L + + +E V P N ++RTA + GV + + P + S + Sbjct: 75 RIMDHLEISRSSFLLVLEGVVDPFNFGYMVRTAYSAGVDGI--LIPEYHWHDLESVILKS 132 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ + + + + LK +G I A + DNA+ + E DYT PT +G E Sbjct: 133 SAGAFDHCSIIPSKDLAQDLRLLKEKGFTIYAGY-RDNAIVYDEADYTNPTVFCVGGELR 191 Query: 124 GITQEALALADQDIIIPMI-GMVQSLNVSVASALILYEAQRQRQN 167 G++++ L DQ + IP G +LN + A ++ +E RQR++ Sbjct: 192 GLSKQVLEQVDQAVYIPYANGFKNALNAASACSVFCFEVLRQRRH 236 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 85/157 (54%), Gaps = 12/157 (7%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGV------HEVHAVWPGSRMRTMASAAAGSNS 69 R L + E V KP N+ +++R+ADA GV ++ ++ + +R ++ A S Sbjct: 116 RPNGLYLVAEAVEKPGNLGSMLRSADAAGVDGFIICNKCTDIYNPNVIRA-STGALFSVP 174 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 + + +A LK ++ LA + + + ++D T+ I++G E+TG+T+ Sbjct: 175 LAEAENQ----EAYDWLKKNNIRTLAATPHTDQI-YTDVDMTQAVAIVVGTEQTGLTELW 229 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 + +D + IPM+G + SLNV+ A+ ++LYEA RQR Sbjct: 230 MEHSDLPVRIPMLGKIDSLNVATATTILLYEAARQRN 266 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 3/148 (2%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRTI 79 + +E + P N+ ++RTA+ VG+ + M + + G+ V Sbjct: 117 LLLEDIRDPGNLGTMVRTAEGVGMTGIVLSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDF 176 Query: 80 GDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIII 139 + +K + + I A HL AV + ++ Y + IL+G E G++ +A +L+ Q I I Sbjct: 177 YACLNQIKNEEIAIYAAHLQ-GAVWYDKVSYQGKSAILIGNEANGLSDKATSLSTQRIKI 235 Query: 140 PMIGMVQSLNVSVASALILYEAQRQRQN 167 PM G V+SLN ++A+A+++YE+ RQ +N Sbjct: 236 PMEGNVESLNAAIAAAVLMYESYRQIRN 263 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 22/169 (13%) Query: 3 PTRYARICEM------LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV------HA 50 P + A +C M AR+ + ++ V P N+ +IRTADA G+ V Sbjct: 86 PQQIAAVCHMPEEKLATARK----VLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTAD 141 Query: 51 VWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDY 110 + G +R+ A GS+ + V R + V LK +G+++ T L N ++EI Sbjct: 142 AFNGKTLRS----AQGSHFHIPV-VRRNLPSYVDELKAEGVKVYGTALQ-NGAPYQEIPQ 195 Query: 111 TRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 + +++G E G+ L D ++ +P+ G +SLNV+VA+A+++Y Sbjct: 196 SESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVY 244 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 9/155 (5%) Query: 18 PDL-----TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSW 70 PDL + +E + KP N+ I+R+ADA G V P + + + A+ G Sbjct: 142 PDLQRAPFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFS 201 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 V + + +A L+ QG++ +AT + + + + D P I+MG E+ G+++ L Sbjct: 202 VPLVVAES-APVLAWLRAQGVRTIATTPAAEKL-YTDADLRGPLAIVMGSEQYGLSEFWL 259 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + IPM G SLNV++A+ + L+EA RQR Sbjct: 260 KNCDLPVRIPMAGQADSLNVAMATIITLFEAVRQR 294 >UniRef50_D1A2Z2 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Streptosporangineae RepID=D1A2Z2_THECD Length = 186 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 9/170 (5%) Query: 1 MNPTRYARICEMLARR-QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM-- 57 + PT R+ RR L + +E V +P NV +I+RT GV + W Sbjct: 10 LRPTDVKRLNRAWRRRTHGRLGLIVESVTQPFNVGSIVRTCAVFGVEHL---WLAGNTTP 66 Query: 58 ---RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 R A G+ V T AV QG++++A L+ A+ Sbjct: 67 PTHRNAGKTALGTERLVPWSQAGTPQQAVREAHDQGLRVIALELAGGAIPLHRAPLEGDV 126 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 C+ +G E G + L AD IP IG V SLNV+VA+A+ L EA+R+ Sbjct: 127 CLAVGGEDHGCSPALLEAADAVAYIPQIGRVGSLNVAVATAIALAEARRR 176 >UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class) RepID=A9WFI1_CHLAA Length = 261 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 68/144 (47%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81 V + +V P N+ I+RTAD G V V + A+ A + + RT Sbjct: 118 VVLVEVADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIARTSWP 177 Query: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141 + Q L A D+R Y RP +++G E+ G+T E LA D + IPM Sbjct: 178 DLLTWARQHRIALVGSSDRGASDYRATTYPRPLLLVLGSERHGLTDEQLAACDLVVRIPM 237 Query: 142 IGMVQSLNVSVASALILYEAQRQR 165 G SLN++VA+ +++YEA R + Sbjct: 238 RGRSDSLNLAVAAGILMYEATRSQ 261 >UniRef50_Q027Q7 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidobacteria RepID=Q027Q7_SOLUE Length = 180 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 8/148 (5%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVH-----AVWPGSRMRTMASAAAGSNSWVQVKTH 76 V ++ V +NV + RTADA V +++ A P S + A A + W Sbjct: 25 VLLDNVRSMYNVGSFFRTADAASVEKLYLSGITAQPPKSAITKTALGAENTVCWEHAWEA 84 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 R + V + QG +I A S +AVD + P ++ G E GI AL D Sbjct: 85 RPL---VEKARAQGYEIAAVETSVHAVDLFDWTPRFPVLVIFGHEVDGIRPAISALCDTH 141 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQ 164 + IPM+G SLNV+ A +++YE R+ Sbjct: 142 VRIPMLGAKHSLNVATAGGVVIYELLRK 169 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 4/147 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTI 79 V ++QV P N+ AI+RTA A GV+ V S T S A + + ++ T+ Sbjct: 86 FIVLLDQVQDPQNLGAIVRTAVAAGVNMVVLTKDNSAHVTPGSIKASAGTIFRIPIVITV 145 Query: 80 GDA--VAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 A + LK +G+ I + E+ RP I+ G E +GI Q D+ + Sbjct: 146 NLARYIEKLKDKGVWIYGADMRGKP--LWEVKLERPLGIVFGNEGSGIRQLVKESCDELV 203 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQ 164 IPM + SLNVSV++ +++YE R+ Sbjct: 204 SIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 1/139 (0%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRT-IG 80 + +E V P N+ IIRTADA G V + + + + S + RT I Sbjct: 104 LILEDVQDPGNLGTIIRTADAAGFDGVFLSEKSADVYNSKTLRSMQGSHFHLPIWRTDIY 163 Query: 81 DAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 ++ +LAT LS +VD++ + + ++MG E GI+ E LADQ + I Sbjct: 164 KICREMQEHNTPVLATTLSKVSVDYKTVPHQESFALVMGNEGQGISAEMTTLADQLVHIT 223 Query: 141 MIGMVQSLNVSVASALILY 159 M G +SLNV+VA+ ++++ Sbjct: 224 MPGQAESLNVAVAAGILIF 242 >UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GVZ1_SORC5 Length = 248 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 7/151 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMRTMAS--AAAGSNSWVQVKT 75 +TV ++ V P N A+IR+A A+G + +WP S T A+ A+AG+ ++ Sbjct: 97 ITVALDGVMDPQNFGAVIRSAVALGARAI--LWPEHSSAPLTPATFRASAGAIEHARLCR 154 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 ++ DA+ L +G+ +A + V+ E+ T P I++G E G + + Sbjct: 155 VPSLPDALEALAARGVAAIALD-AQGPVELGELPLTGPVAIVIGAEDKGTRRSVRRVCQH 213 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +PM G + SLN SVA A+ LYE RQR+ Sbjct: 214 VARLPMTGPISSLNASVAGAIALYEVVRQRR 244 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 14/157 (8%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSN--- 68 + R + + ++++ P N+ IIRTA A G+ + + + + A Sbjct: 110 LFHNRNRGIILILDRIQDPGNMGTIIRTAVAAGIEGIICLKGSVDIYNLKVIRASMGAIF 169 Query: 69 -----SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 + V K + I D K ++ T L+ + + EIDY P +++G E Sbjct: 170 SIPILTGVSFKRLQKIRDEYPDYK-----LICTDLNTSKF-YHEIDYQEPLMLVIGNEAR 223 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 GI +E L+LAD I IP++G + SLN +V++A++LY+ Sbjct: 224 GIREELLSLADIKIKIPLMGNIDSLNAAVSTAIVLYD 260 >UniRef50_Q67QG1 rRNA methyltransferase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QG1_SYMTH Length = 273 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 1/151 (0%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHR 77 P L + ++ + P N+ IR+ +A+G A + + R Sbjct: 117 PGLVLVLDGLQDPGNLGTAIRSLEAMGGGGAVVAGGVDPYNPKVVRGAMGSLFRLPVVKR 176 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 IGDA+A L+ G +I + A+ +D R +++G E G + EA ALAD + Sbjct: 177 PIGDALAGLRAAGRRIYLAE-AGGALAPWAVDLARGAAVVVGSEAAGPSPEARALADGVV 235 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 IPM G +SLN VA++L+ YEA RQ+ A Sbjct: 236 SIPMAGPTESLNAGVAASLLAYEAMRQQGAA 266 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 10/149 (6%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEV----HAVWP-GSRMRTMASAAAGSNSWVQVKTH 76 V ++++ P N+ IIRTA++ V +V P S+ A +Q Sbjct: 124 VILDRIQDPGNMGTIIRTAESANADAVIITKGSVDPYNSKTLRATMGAIFHMPIIQCDDD 183 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 R + D LK ++++A L D + +IDY I++G E GI++ L+ DQ Sbjct: 184 RWLDD----LKENEVKLIAADL-DTDKTYIDIDYNTSIGIIIGNEANGISEALLSKVDQR 238 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQR 165 +IIP++G ++SLN SVA+++++Y+A ++ Sbjct: 239 VIIPILGKIESLNASVAASILIYKAAEEK 267 >UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWK7_9RHOB Length = 271 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 15/151 (9%) Query: 20 LTVCMEQVHKPHNVSAIIRTA-----DAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVK 74 L + ++QV PHNV AI+R+A DAV E HA GS + AS A V+VK Sbjct: 123 LVLALDQVTDPHNVGAILRSAVALDADAVVTTERHAPEEGSVLAKSASGALDMIKHVRVK 182 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQ---EALA 131 + +A +K +G +A SD E ++ T +++G E G+ Q EA Sbjct: 183 N---MARFIAEMKDEGFSCIALD-SDGPASLEETPFSDKTVLVLGSEGKGVRQGVREACG 238 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 L + + M G ++SLNVS A+ L LY A+ Sbjct: 239 LTAR---LDMPGEIRSLNVSNAAVLSLYVAR 266 >UniRef50_B0S1P7 23S rRNA methyltransferase n=2 Tax=Finegoldia magna RepID=B0S1P7_FINM2 Length = 256 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 70/143 (48%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTH 76 + D + +E ++ P N+ IIR+A+A G +++ + + + S ++ Sbjct: 107 KSDQILFLENINDPGNLGTIIRSAEAFGYNKIVLSNNSCDIYNSKTIRSAMGSLFRMNIS 166 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + + K +G +I T L N+ EI +++G E GI+ E AD+ Sbjct: 167 YENINVLEKYKSKGFKIYETSLEKNSRSILEIKNKEKHVLIIGNEANGISDEIKKYADEF 226 Query: 137 IIIPMIGMVQSLNVSVASALILY 159 +IIPM + +SLN S+A++L ++ Sbjct: 227 LIIPMDNVTESLNASIAASLSMF 249 >UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAQ0_DESAH Length = 291 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 1/143 (0%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHE-VHAVWPGSRMRTMASAAAGSNSWVQVKTHR 77 D + ++ + NV +I R+ DA G + PG + A G+ W+ Sbjct: 133 DFHIALDGLRSLFNVGSIFRSCDAAGFSSLILGNTPGRENAAVRKTAMGTADWMPHTQTV 192 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + + +K QG I A ++ + + + D+ +++G E+ GI+ LA+ DQ + Sbjct: 193 DLAQTLVDMKAQGYTITAVETAEQSKPYHDNDWHHRGVLVVGNEEYGISSHVLAVCDQVV 252 Query: 138 IIPMIGMVQSLNVSVASALILYE 160 IPM G SLNV+ A+A++++ Sbjct: 253 HIPMFGRKNSLNVANAAAILMFH 275 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 6/165 (3%) Query: 6 YARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV--HAVWPGSRMRTM 60 Y + E L + +Q + + ++Q+ P N AIIR+A+ GV + S T+ Sbjct: 71 YLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETV 130 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++ G+ V + + D++ LK G I +D ++ + C+++G Sbjct: 131 VKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAE-ADGETEYYNEPFPEKLCLVLGS 189 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E G+ ++ D+ + IPM G + SLNVSVA+ ++L E + + Sbjct: 190 EGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISKNK 234 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 7/154 (4%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQ 72 P + ++ V PHN+ A +R+A+A GV V + P R + AAG+ Sbjct: 103 NPPFLLVLDGVQDPHNLGACLRSANAAGVDAV--IIPQDRAVNKTPIVQKTAAGAAEVTS 160 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 + T + + LK G+ S + + + T P +++G E G+ + Sbjct: 161 LFTVTNLATCLERLKKCGIWCYGLDQSGTRLIY-DAPLTGPLALVLGAEGKGLRRLTKVC 219 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + IPM+G V SLNVSVA+ + L+E RQRQ Sbjct: 220 CDDLVAIPMVGTVGSLNVSVAAGVGLFEVVRQRQ 253 >UniRef50_UPI0001BC4585 23S rRNA methyltransferase n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4585 Length = 224 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTH-RTIG 80 + ++ + P N+ +IR DA G ++ + S V+ H Sbjct: 76 IVLDDIQDPGNLGTMIRLVDAAGFSDIFLTKHSVDCYNEKVVRSSMGSIFHVRLHVMEKK 135 Query: 81 DAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP 140 + + +L+ + +L T L ++V + E+ + G E G+++E L LA+Q IIIP Sbjct: 136 EILEYLQTENYHVLVTTLQRDSVAYTEMQLKEKNAFVFGNEGHGVSKEFLELAEQKIIIP 195 Query: 141 MIGMVQSLNVSVASALILY 159 + G +SLNV++A+ +IL+ Sbjct: 196 ISGQAESLNVAMAAGIILF 214 >UniRef50_A3ZYD4 RNA methyltransferase, TrmH family protein n=3 Tax=Bacteria RepID=A3ZYD4_9PLAN Length = 166 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 3/133 (2%) Query: 32 NVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGM 91 N+S I+R A V V + G+ M+ A + + HR++ + LK +G Sbjct: 33 NLSRIVRAASCCAVSRV--IVTGN-MKIDPKIARDGAEKLPISRHRSLPPVLKELKSEGY 89 Query: 92 QILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVS 151 +++ + N+ D + R T +++G E+ G + L L D + IP+ GM S NV+ Sbjct: 90 RLVGLEQTTNSQDIHHFSFVRNTVLVIGNERQGTPDDVLRLLDDVVEIPVYGMPYSFNVA 149 Query: 152 VASALILYEAQRQ 164 A+ + LYE RQ Sbjct: 150 TATCMALYEFCRQ 162 >UniRef50_Q6ME25 Putative tRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6ME25_PARUW Length = 246 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 9/154 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVH--AVWPGSRMRTMASAAAGSNSWVQVKTHR 77 +++ ++ + HNV +IIRT +A + ++ P + + + + + G+ WV+ + Sbjct: 90 ISIYLDNLRSAHNVGSIIRTVEAFSLGSIYFSTQTPYTNHKQVQNVSMGAYQWVKCYQNE 149 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + D I+A S+ A++ E + +++G E+ G +QE L A I Sbjct: 150 DLNDLT-------QPIIALETSEEAINLYEFIFPEHFTLVVGNEEYGCSQEILTKAHYLI 202 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 IP+ G SLNV+ A A+ E RQR+ A +Y Sbjct: 203 EIPLRGRKNSLNVANAFAITAGEIYRQRKTAKIY 236 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%) Query: 3 PTRYARICEMLARRQPD---------LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 P RY + ML+ P + + +++V P N A++R+A A G V + P Sbjct: 80 PIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAMLRSAVAAGTDGV--IVP 137 Query: 54 GSRMRTMASAA----AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREID 109 M + +AA AG+ + + + + LK +G + + + D Sbjct: 138 TREMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYGAEGTAE-TPLWDAD 196 Query: 110 YTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + RP +++G E G+ E D+ + IPM G +SLNVSVA+ L+++EA R R Sbjct: 197 WDRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGLLVFEAARSR 252 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 8/154 (5%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEV-----HAVWPGSRMRTMASAAAGSNSWVQVK 74 + + ++QV PHN+ A +RTA+A G V HA S + +A AA G+ S + V Sbjct: 97 MVLLLDQVTDPHNLGACVRTAEAAGCAAVIVLKDHAADVHSPV--VAKAACGALSRLPVL 154 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + + L+ QG + + + + + T ++MG E G+ + D Sbjct: 155 RVINMKRCIEQLQQQGFWTVGL-AGEAELSIYDAKLSGATAVVMGSEDKGVRRLVRETCD 213 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 Q I IPM G+V+SLNVSVA+ + L+E RQR A Sbjct: 214 QLIHIPMPGVVESLNVSVATGVALFEINRQRVTA 247 >UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZU7_9BACT Length = 259 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 8/146 (5%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAGSNSWVQV 73 P V ++ V P N+ A++RT DA GV V + P R+ +T+A +AG+ + + Sbjct: 111 PSPLVAVDGVQDPRNLGALLRTCDAAGVGGV--LIPRRRVAPLSQTVAKTSAGALFTLPL 168 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + ++ LK +G I A LS + + + +++G E+ G+T+ L LA Sbjct: 169 VRIGNLSGSLRQLKKEGYAIAALDLSGDPLPEGPLPGP--LVLVVGAEEKGVTRPVLDLA 226 Query: 134 DQDIIIPMIGMVQSLNVSVASALILY 159 D +PM G VQSLN+SVA+ + LY Sbjct: 227 DWRFRLPMKGKVQSLNLSVAAGIFLY 252 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 7/158 (4%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVH----EVHAVWPGSRMRTMASAAAGSNS 69 AR + L V ++ + P N AIIR+A+ +G H E P S + + AAG+ S Sbjct: 83 ARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAHGVVVEERRSAPLSPV--VVKTAAGATS 140 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 ++ V + + + LK G+ I + A D D + +++G E G+ + Sbjct: 141 YLPVAQTKNLPRLIDALKEDGVWIYGAA-GEAAQDIGRTDLSGKVALVIGAEGEGLRRLV 199 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 D + IP G VQSLN SVA+ ++LYEA R R Sbjct: 200 REKCDALVRIPTRGQVQSLNASVAAGILLYEAARARDK 237 >UniRef50_C5QRV0 TrmH family rRNA methyltransferase n=3 Tax=Bacillales RepID=C5QRV0_STAEP Length = 270 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 9/142 (6%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS---RMRTMASAAAGSNSWVQVKTHRT 78 + ++++ P N+ +IRTADA G+ ++ + G+ + A+ GS + V T Sbjct: 132 LLIDRIQDPGNLGTLIRTADAAGL-DLIVMEKGTADPYQDKVMRASQGSIFHIPVVTE-- 188 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 D ++ + T L +NAV F+EI+ +L+G E G+ QE L +++I Sbjct: 189 --DLATYMNNFDGPVYGTAL-ENAVSFKEIEAQSTFALLLGNEGEGVNQELLQQTTKNLI 245 Query: 139 IPMIGMVQSLNVSVASALILYE 160 IP+ G +SLNV++A +++LY+ Sbjct: 246 IPIYGKAESLNVAIAGSILLYQ 267 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGV-------HEVHAVWPGSRMRTMASAAAGSNSWVQVK 74 + ++ + P N+ I RTA+A G V P TM + +V Sbjct: 133 IVLDNLQDPGNLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRSTMGAVFRMPFFYV--- 189 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + + AV L QG++ A HL+ V + E DYT L+G E G+ E AD Sbjct: 190 --KDLPAAVKSLSSQGIRTYAAHLNGKNV-YDEEDYTEGCAFLIGNEGNGLRDEVSECAD 246 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I IPM G +SLN +VA+A++++EA RQR+ Sbjct: 247 CLIRIPMCGKAESLNAAVAAAVLMFEAGRQRR 278 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 8/167 (4%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRT 59 T I E+ + L + ++ + PHN+ +I+RTADA V V + P R Sbjct: 95 TDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNVCGV--IIPKHRSVGVTPV 152 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 ++ + G+ + + + + LK +G I T ++ D + +++G Sbjct: 153 VSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNGTPSDCWNTN--GKLALVIG 210 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 E GI+ D+ I IPM G VQSLN SVA+A+++YE R R+ Sbjct: 211 NEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRR 257 >UniRef50_D0JBH4 SpoU rRNA methylase family protein n=2 Tax=Blattabacterium RepID=D0JBH4_BLASB Length = 267 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 16/158 (10%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEV------HAVWPGSRMRTMASAAAGSNSWVQ 72 L + ++ + KP N+ A++RTADA G+H + ++ + +R + +++ Sbjct: 111 SLILILDGIEKPGNIGAMLRTADAAGIHIIILCNMKTHIYNSNVIRCSLGSVFTRKIFIE 170 Query: 73 VKTHRTIGDAVAHLKGQGMQILAT----HLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 +G ++ L+ ++I+ T H + +++Y+ I+ G E GI+ Sbjct: 171 -----KMGSIISWLQENKVKIVGTGFYNHQKAKNLYKTKLNYSN-LAIIFGSENKGISNI 224 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +A++ I IPM G V SLNVS A ++I+YE RQR Sbjct: 225 WFNIANKIITIPMFGNVDSLNVSHAMSIIIYEIIRQRN 262 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 7/148 (4%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM----RTMASAAAGSNSWVQVKTHR 77 + ++ + PHN+ AIIRTA+A G + V P R+ T+ AAG+ V Sbjct: 220 IIIDSITDPHNLGAIIRTAEAFGAQGM--VLPQRRVAGITSTVMKVAAGALEHFPVARVV 277 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + A+ LK G I T ++ + D P +++G E G++ D I Sbjct: 278 NLSRALETLKESGFWIYGT-VAGKQTALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLI 336 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQR 165 IP+ G SLN SVA+A+ LYE RQR Sbjct: 337 TIPLAGKTPSLNASVAAAISLYEIFRQR 364 >UniRef50_B3L269 SpoU rRNA Methylase, putative n=3 Tax=Plasmodium RepID=B3L269_PLAKH Length = 264 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAA--GSNSWVQV 73 + P + V + + K N+ +I+R+ A GV ++ V SR R + G+ ++ + Sbjct: 24 KCPQMYVAIYNIGKKKNIGSIVRSCVAFGVSKIFVV---SRKRNEINFFGQMGTCKYITI 80 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDY-TRPTCILMGQEKTGITQEALAL 132 + + + HL + + A ++D A+ + + T L G E TGI E L+ Sbjct: 81 EYFSNMKELRIHLANNNILLYACEITDRAIAVTRTPFVNKDTAFLFGNEGTGINDETLSY 140 Query: 133 ADQDIIIPMIGM-VQSLNVSVASALILY 159 D+ I IP G SLNVSV+ A+IL+ Sbjct: 141 CDKIIYIPQYGNGTCSLNVSVSCAIILH 168 >UniRef50_C4ZPQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thauera sp. MZ1T RepID=C4ZPQ7_THASP Length = 277 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 17/156 (10%) Query: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAV--------WPGSRMRTMASAAAGSNSWVQV 73 + ++ V P N+ +++RTA A G+ HA+ W +R A G+ V++ Sbjct: 122 IVVDGVQDPGNLGSLLRTAAAAGIR--HALLGEGCAQAWSPRALR----AGMGAQFVVRI 175 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + + +A L+ LAT L ++A E+D P L G E G++ LA A Sbjct: 176 EEGCEL---LARLESYPGLCLATALREDAHPLYELDLRGPVAWLFGAEGQGLSPALLARA 232 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 D +IIPM ++SLNV+ A+A+ L+E RQ + G Sbjct: 233 DGCVIIPMTAGIESLNVAAAAAVCLFEQARQLRATG 268 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 14/156 (8%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHE-------VHAVWPGSRMRTMASAAAGSNSW 70 P L + ++ + P N+ I RTA+A GV V P + TM A + Sbjct: 126 PHLMI-LDNLQDPGNLGTIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMG--ALYRMPF 182 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 V V+ R + + LK + ++ A HL D + + DY + T L+G E G+ +E Sbjct: 183 VYVEDLR---ETIHTLKEKNIKSYAAHL-DGKNTYDKEDYRQGTAFLIGNEGNGLREEIA 238 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 AD I IPM G V+SLN +VA+ ++++E RQR+ Sbjct: 239 QCADTWIRIPMCGQVESLNAAVAATVLMFEVSRQRR 274 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 7/150 (4%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSNSWVQVKT 75 L + ++ + P N+ AIIR+A+A+G + + P R ++A AAG+ + V Sbjct: 271 LLLALDGLTDPQNLGAIIRSAEALGAQGL--ILPQRRSAGLTGSVAKVAAGALEHLPVAR 328 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + ++ LK +G ++ + + EI + P +++G E GI+ L DQ Sbjct: 329 VVNLNRSLEKLKDEGYTVVGL-AEEGSSTLSEIKFQGPLVVVVGSEDKGISLITRRLCDQ 387 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IP+ G+ SLN SVA+++ LYE R + Sbjct: 388 LVRIPLKGVTTSLNASVATSIFLYEVARSK 417 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 12/172 (6%) Query: 1 MNPTRYARICEMLARRQ--PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 M P Y I E+ +++ L + ++++ P N AIIR+A+ +G ++ G+ + Sbjct: 92 MAPFPYTSI-ELFNQQEITSPLFLILDRIQDPFNFGAIIRSAEIMGAD---GIFSGTHEQ 147 Query: 59 TMASA-----AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 ++ +AG+ + V + + K G+ I+ T + + + ++ +P Sbjct: 148 CEVTSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNGINIVGTAMQASE-KLNDYNFQQP 206 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 T +++G E TGI+ E A + IP G +SLNV+V+++++LYEA RQR Sbjct: 207 TAVIVGNEGTGISPELQAECTHLVRIPQQGKTESLNVAVSASILLYEASRQR 258 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 14/155 (9%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHA------VWPGSRMRTMASAAAGSNS 69 ++ + ++++ P N+ IIRTAD+ GV + A ++ +R+ + N Sbjct: 115 KKDKFVLILDRIQDPGNMGTIIRTADSAGVDAIIALKGCVDIYNPKVIRSTMGSIFDMN- 173 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHL-SDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + T V LK I++++L ++N D +IDY +++G E GI +E Sbjct: 174 IIDASQDET----VDMLKSLDFNIVSSYLNTENFYD--KIDYGSKVALVIGNEANGINEE 227 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++ +D + IP+ G +SLN +++SA+++YE ++ Sbjct: 228 LVSKSDILVKIPIYGKAESLNAAISSAILMYEIKK 262 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AGJ3 tRNA guanosine-2'-O-methyltransferase n=231 Tax=... 350 2e-95 UniRef50_Q0VRD7 RNA methyltransferase, TrmH family, group 3 n=2 ... 288 1e-76 UniRef50_Q15Z06 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 285 7e-76 UniRef50_B5JS83 tRNA (Guanosine-2-O)-methyltransferase n=3 Tax=B... 282 6e-75 UniRef50_C5BJC4 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ga... 277 2e-73 UniRef50_A1U493 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Ga... 274 1e-72 UniRef50_C7R944 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Ka... 272 7e-72 UniRef50_A3IM41 RRNA methylase SpoU n=1 Tax=Cyanothece sp. CCY01... 266 3e-70 UniRef50_Q7TV55 tRNA/rRNA methyltransferase (SpoU) n=34 Tax=cell... 266 3e-70 UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Ber... 266 3e-70 UniRef50_Q0AB97 tRNA guanosine-2'-O-methyltransferase n=2 Tax=Ec... 260 3e-68 UniRef50_A4SEW2 tRNA guanosine-2'-O-methyltransferase n=10 Tax=C... 259 6e-68 UniRef50_C1XS02 rRNA methylase n=2 Tax=Bacteria RepID=C1XS02_9DEIN 257 2e-67 UniRef50_B3QXG6 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Ch... 253 3e-66 UniRef50_A4BEK2 Putative tRNA methyltransferase n=1 Tax=Reinekea... 229 6e-59 UniRef50_O67577 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ba... 228 1e-58 UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chiti... 226 6e-58 UniRef50_B8IYB0 tRNA guanosine-2'-O-methyltransferase n=14 Tax=D... 216 6e-55 UniRef50_B9L1B3 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Ba... 214 1e-54 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 212 8e-54 UniRef50_A6Q996 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 209 6e-53 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 208 1e-52 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 207 2e-52 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 207 2e-52 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 207 2e-52 UniRef50_C9RX94 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Geoba... 206 5e-52 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 206 6e-52 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 205 8e-52 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 205 8e-52 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 205 9e-52 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 205 9e-52 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 205 1e-51 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 205 1e-51 UniRef50_C4L0U6 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ba... 205 1e-51 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 204 2e-51 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 204 2e-51 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 204 2e-51 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 203 3e-51 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 203 4e-51 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 203 4e-51 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 202 8e-51 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 202 8e-51 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 201 1e-50 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 201 1e-50 UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polar... 201 1e-50 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 201 1e-50 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 201 2e-50 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 200 2e-50 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 200 3e-50 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 200 4e-50 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 200 4e-50 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 200 4e-50 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 199 5e-50 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 199 5e-50 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 199 6e-50 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 199 6e-50 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 199 7e-50 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 198 1e-49 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 198 1e-49 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 198 1e-49 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 198 1e-49 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 198 1e-49 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 197 2e-49 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 197 2e-49 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 197 2e-49 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 197 2e-49 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 197 2e-49 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 197 3e-49 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 196 4e-49 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 196 5e-49 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 196 7e-49 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 195 8e-49 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 195 9e-49 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 195 1e-48 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 195 1e-48 UniRef50_Q9LXE4 rRNA methylase-like protein n=11 Tax=Magnoliophy... 194 1e-48 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 194 3e-48 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 193 3e-48 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 193 3e-48 UniRef50_D1U4M7 tRNA guanosine-2'-O-methyltransferase n=1 Tax=De... 193 5e-48 UniRef50_C8WR00 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Bacil... 192 5e-48 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 192 5e-48 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 192 6e-48 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 192 7e-48 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 192 7e-48 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 192 8e-48 UniRef50_B7DP24 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Alicy... 191 1e-47 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 191 2e-47 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 191 2e-47 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 191 2e-47 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 191 2e-47 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 190 3e-47 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 190 3e-47 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 190 3e-47 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 190 4e-47 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 189 6e-47 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 189 6e-47 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 189 8e-47 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 189 8e-47 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 189 8e-47 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 189 9e-47 UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1... 188 1e-46 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 188 1e-46 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 188 1e-46 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 187 2e-46 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 187 2e-46 UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsu... 187 2e-46 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 187 2e-46 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 187 3e-46 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 186 4e-46 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 186 4e-46 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 186 4e-46 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 186 4e-46 UniRef50_A9S3U1 Predicted protein (Fragment) n=2 Tax=Physcomitre... 186 5e-46 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 186 5e-46 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 186 5e-46 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 186 6e-46 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 186 7e-46 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 184 1e-45 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 184 1e-45 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 184 2e-45 UniRef50_A7HIF7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer... 184 2e-45 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 184 2e-45 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 184 2e-45 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 184 3e-45 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 184 3e-45 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 184 3e-45 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 183 4e-45 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 183 4e-45 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 183 4e-45 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 183 4e-45 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 182 5e-45 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 182 6e-45 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 182 9e-45 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 182 9e-45 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 182 9e-45 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 181 1e-44 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 181 1e-44 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 181 2e-44 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 181 2e-44 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 181 2e-44 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 181 2e-44 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 181 2e-44 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 181 2e-44 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 181 2e-44 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 180 3e-44 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 180 3e-44 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 180 4e-44 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 180 4e-44 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 179 5e-44 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 179 6e-44 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 179 7e-44 UniRef50_Q112U6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Oscil... 179 8e-44 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 179 9e-44 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 178 1e-43 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 178 1e-43 UniRef50_A5F9W1 tRNA/rRNA methyltransferase (SpoU) n=16 Tax=Bact... 178 1e-43 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 178 1e-43 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 178 1e-43 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 177 2e-43 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 177 2e-43 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 177 2e-43 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 177 3e-43 UniRef50_Q84X80 CR004 protein n=1 Tax=Chlamydomonas reinhardtii ... 177 4e-43 UniRef50_Q6MNP1 Putative RNA methylase n=1 Tax=Bdellovibrio bact... 176 4e-43 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 176 5e-43 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 176 5e-43 UniRef50_B3RWG3 Putative uncharacterized protein n=1 Tax=Trichop... 176 5e-43 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 176 6e-43 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 176 6e-43 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 176 6e-43 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 175 7e-43 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 175 8e-43 UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0... 175 1e-42 UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casse... 175 1e-42 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 175 1e-42 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 174 2e-42 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 174 2e-42 UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepI... 174 2e-42 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 174 2e-42 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 174 2e-42 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 174 3e-42 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 174 3e-42 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 174 3e-42 UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococ... 173 3e-42 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 173 3e-42 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 173 4e-42 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 173 4e-42 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 173 4e-42 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 173 5e-42 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 173 5e-42 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 172 5e-42 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 172 6e-42 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 172 8e-42 UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selen... 172 9e-42 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 172 9e-42 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 172 9e-42 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 170 2e-41 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 170 3e-41 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 170 3e-41 UniRef50_B0MYM4 Putative uncharacterized protein n=1 Tax=Alistip... 170 3e-41 UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2... 170 3e-41 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 170 4e-41 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 170 4e-41 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 169 5e-41 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 169 5e-41 UniRef50_C7NJ34 rRNA methylase n=2 Tax=Micrococcineae RepID=C7NJ... 169 5e-41 UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verru... 169 5e-41 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 169 5e-41 UniRef50_Q2S465 RRNA methylase n=1 Tax=Salinibacter ruber DSM 13... 169 8e-41 UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 169 9e-41 UniRef50_Q09CR8 RRNA methylase n=2 Tax=Cystobacterineae RepID=Q0... 169 9e-41 UniRef50_D0MG21 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo... 169 9e-41 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 169 1e-40 UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Myc... 168 1e-40 UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 168 1e-40 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 168 1e-40 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 168 1e-40 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 168 1e-40 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 168 2e-40 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 167 2e-40 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 167 2e-40 UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2... 167 2e-40 UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus A... 167 3e-40 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 166 4e-40 UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacte... 166 4e-40 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 166 5e-40 UniRef50_A4S6N6 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 166 5e-40 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 166 5e-40 UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 166 5e-40 UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerot... 166 6e-40 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 166 6e-40 UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph... 165 8e-40 UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostri... 165 8e-40 UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax... 165 8e-40 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 165 1e-39 UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium ther... 165 1e-39 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 165 1e-39 UniRef50_C1E8J5 Predicted protein (Fragment) n=3 Tax=Mamiellales... 165 1e-39 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 165 1e-39 UniRef50_C7M4Y5 tRNA/rRNA methyltransferase (SpoU) n=13 Tax=Bact... 165 1e-39 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 165 1e-39 UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococc... 165 1e-39 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 164 1e-39 UniRef50_UPI0001BC4585 23S rRNA methyltransferase n=1 Tax=Fusoba... 164 2e-39 UniRef50_B7C827 Putative uncharacterized protein n=1 Tax=Eubacte... 164 2e-39 UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirel... 164 2e-39 Sequences not found previously or not previously below threshold: UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 171 1e-41 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 170 3e-41 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 170 3e-41 >UniRef50_P0AGJ3 tRNA guanosine-2'-O-methyltransferase n=231 Tax=Bacteria RepID=TRMH_ECO57 Length = 229 Score = 350 bits (900), Expect = 2e-95, Method: Composition-based stats. Identities = 229/229 (100%), Positives = 229/229 (100%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM Sbjct: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ Sbjct: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE Sbjct: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG Sbjct: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 >UniRef50_Q0VRD7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VRD7_ALCBS Length = 230 Score = 288 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 154/226 (68%), Gaps = 2/226 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P RY RIC+ L RRQPDLTV M+ VHKPHN++AI+RT DAVG+ +VHAV P +R R Sbjct: 1 MTPERYRRICDTLDRRQPDLTVIMDGVHKPHNIAAIVRTCDAVGILDVHAVLPKNRARMA 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A A GS WVQV D + L+GQG+Q+LA HLSD+A+++R++DYTRPT +L+G Sbjct: 61 AGTAMGSQRWVQVHKRDESTDVIRELQGQGVQVLAAHLSDDAIEYRQVDYTRPTALLLGT 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ E + DQ++ IPM+GMV+S NVSVA+A+IL EA QR+ G Y + + Sbjct: 121 EKFGVSDEVASAVDQNVTIPMMGMVESFNVSVAAAIILSEACEQRRAKGFY--DQPRVAA 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQ 226 A LLF GY +A++ G+PYP ++++G+++ A A +Q Sbjct: 179 ARYHELLFRWGYARIARLCDAHGVPYPELDEEGQVKDSAALTALLQ 224 >UniRef50_Q15Z06 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z06_PSEA6 Length = 256 Score = 285 bits (731), Expect = 7e-76, Method: Composition-based stats. Identities = 133/229 (58%), Positives = 175/229 (76%), Gaps = 3/229 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+ RY RI ++L+ RQP LTVC+EQVHKPHNVSA++R+ DAVG++ +H VW + Sbjct: 7 MSVERYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAVLRSCDAVGINRIHGVWDQK-TKIR 65 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS WV+ + H +IGDAV+ LK Q MQ+L THLSD++VDFR+IDYT+PT I++GQ Sbjct: 66 KGTAMGSEHWVKTEMHTSIGDAVSVLKQQNMQVLVTHLSDDSVDFRDIDYTQPTAIILGQ 125 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G T+EA+A+AD++I+IPM+GMVQSLNVSVA+A++LYEAQRQR+ AGMY + L E Sbjct: 126 EKHGATEEAIAVADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREVAGMY--NSLQLSE 183 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 E QR+LFEGG+PVL+ V + KGL YPH+++ G I ADA WW MQ Sbjct: 184 EECQRVLFEGGFPVLSNVCRNKGLDYPHIDEGGNIVADASWWQKMQTTA 232 >UniRef50_B5JS83 tRNA (Guanosine-2-O)-methyltransferase n=3 Tax=Bacteria RepID=B5JS83_9GAMM Length = 225 Score = 282 bits (723), Expect = 6e-75, Method: Composition-based stats. Identities = 114/213 (53%), Positives = 147/213 (69%), Gaps = 2/213 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+P R+ R + L RRQ LTV ME VHKPHN SAI+R+ +AVGVH HAV+P + Sbjct: 1 MSPERHQRFIDTLKRRQTSLTVVMENVHKPHNFSAIVRSCEAVGVHRAHAVYPEGGIGNN 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G++ WVQV THR I LK QG Q+L HL + AVDFRE+DYT+PT ++MG Sbjct: 61 AGTTVGAHKWVQVDTHRNIQTPFQQLKAQGFQLLTAHLDETAVDFREVDYTQPTAVVMGS 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E GI++EA LAD I+IPM+G+ +SLNVSVA+ALIL+EAQRQRQ AGMY E L E Sbjct: 121 ELHGISEEAAQLADHSIVIPMLGLTESLNVSVATALILFEAQRQRQLAGMY--EQPELDE 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQG 213 A ++ L+FE YP LA+ + +G PYP ++ +G Sbjct: 179 ATRKTLMFEWAYPDLARRYQSRGEPYPELDDEG 211 >UniRef50_C5BJC4 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Gammaproteobacteria RepID=C5BJC4_TERTT Length = 228 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 142/227 (62%), Gaps = 2/227 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R+ RI +L +RQPDLTV ++VHK N+SAI RT DAVG+ +H V P +T Sbjct: 1 MTPERFQRITSVLNKRQPDLTVITDEVHKGRNLSAITRTCDAVGIDTIHCVMPEDGYQTY 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A + WV V+ H +I V LK +G Q++A +L DN +D+R +DYT+PT +++G Sbjct: 61 NGTSASAEKWVAVQHHSSISAPVNDLKREGFQLVAANLGDNTLDYRNVDYTKPTALVLGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G++ EA A D ++ +PM+GMV+S NVSVA+A+IL EAQ QRQ AG+Y + L Sbjct: 121 EVKGVSPEAAAAVDYNVTVPMVGMVESFNVSVAAAIILMEAQHQRQQAGLY--DQPRLTA 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQA 227 + F +PVLAK G+ YP V + GE++ + W++ QA Sbjct: 179 DVYRARFFHWAHPVLAKWCDDNGVEYPPVREDGEVKNLSAWYSAEQA 225 >UniRef50_A1U493 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Gammaproteobacteria RepID=A1U493_MARAV Length = 244 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 139/227 (61%), Gaps = 3/227 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R ARI ++L RQPDL V +QVHKP N+SAIIR+ DA G+ +H VWP R Sbjct: 1 MTPERLARIKQVLNTRQPDLRVLTDQVHKPRNLSAIIRSCDAFGLANMHVVWPKEGFRAF 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS WV TH T+ +AV LK QG ++ A LSD AVDFRE+DYT P I+MG Sbjct: 61 RKTAGGSFHWVTTHTHPTMDNAVTELKAQGHKLYAAQLSDRAVDFREVDYTVPCTIIMGN 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G+ AD+ I+IPM+GMV+SLNVS A ++IL EAQRQR+ AGM+ + +P+ Sbjct: 121 EVDGVNPVTAEQADEHIVIPMMGMVESLNVSSACSIILSEAQRQRKLAGMF--DQRRMPD 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQ-GEIEADADWWATMQ 226 E RLLF P + + + LPYP ++ + GE+ W ++ Sbjct: 179 DEYNRLLFCWCQPTVKRYCDDRNLPYPPIDHETGELIDGVGWMQEVR 225 >UniRef50_C7R944 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R944_KANKD Length = 231 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 110/220 (50%), Positives = 151/220 (68%), Gaps = 3/220 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA 61 +P R +I +L+ RQPDLTV M+QVHKPHN++AI+RTADAVG+ VHAV+P T Sbjct: 5 SPARLQKILTLLSNRQPDLTVFMDQVHKPHNLAAIVRTADAVGIGHVHAVFPEDVKFTGH 64 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 ++GS WV H + +A +K +GMQ+LA H SD AVDFR IDYT+PTC+L+G E Sbjct: 65 HTSSGSKRWVTTHKHSNLKSGIAEMKAKGMQVLAAHFSDTAVDFRTIDYTQPTCLLVGSE 124 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181 G++ EA +ADQ +IIPM+GMVQSLNVSVA+ALILYEAQRQR +A MY +P+A Sbjct: 125 LVGVSDEAAEIADQHVIIPMVGMVQSLNVSVATALILYEAQRQRSDAEMY--GECKIPQA 182 Query: 182 EQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADW 221 E + F+ +P + + + + YP +++ G+I D +W Sbjct: 183 EVDEICFKALHPTITRFCDKHKIRYPKMDEFGDI-DDPEW 221 >UniRef50_A3IM41 RRNA methylase SpoU n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IM41_9CHRO Length = 220 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 106/215 (49%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P RY RI ++L +RQPDLT+ E VHKPHN+SAIIRT DAVG+ +VH + T Sbjct: 3 LLPRRYHRIRQVLEKRQPDLTILTEDVHKPHNLSAIIRTCDAVGILDVHCINTTDEFPTF 62 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 + + GS+ WV + +H I + HLK Q I A H +D ++D+REIDYT+PT IL+G Sbjct: 63 SQVSQGSDKWVFLHSHPNIKTGINHLKRQNFNIYAAHFTDQSLDYREIDYTQPTAILLGA 122 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G+++EA L D II+PM+GMVQSLNVSVA+A+IL+EAQRQR MY + S L Sbjct: 123 EKWGVSEEAANLVDGHIIVPMLGMVQSLNVSVAAAVILFEAQRQRLAQKMY--DTSRLDL 180 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 ++LFE YP LA + ++KG YP + + G I Sbjct: 181 DRYHKILFEWSYPALATIYQKKGENYPSLGKNGVI 215 >UniRef50_Q7TV55 tRNA/rRNA methyltransferase (SpoU) n=34 Tax=cellular organisms RepID=Q7TV55_PROMM Length = 245 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 137/218 (62%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R+ R+ +L R DLTV +E V KPHN+SAI+R+ DAVGV E HAV R+ T Sbjct: 19 LLPRRFDRLKAVLDCRMADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAVNYSGRLPTF 78 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 S A GS W+ +K H +I AV +K G ++ THL NA D+R+ D+ PT ++G Sbjct: 79 NSTAQGSQKWIPLKEHSSIEVAVKAIKDSGFRLYGTHLGGNARDYRDCDFCEPTAFVLGA 138 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G+++ A L D+ I IPM GMVQSLNVSVA+A +L+EA RQR+ AG+ + L Sbjct: 139 EKWGLSKLATPLMDEGIFIPMSGMVQSLNVSVAAATLLFEALRQRRLAGIAPQAGEGLEP 198 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD 218 A Q+ LFE YP +A +++G YP +N QGEI+ Sbjct: 199 ALYQQRLFEWAYPEVAAWCQQEGKSYPALNDQGEIQGS 236 >UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N3Z0_9GAMM Length = 229 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 104/221 (47%), Positives = 138/221 (62%), Gaps = 2/221 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R R+ ++L +RQPDLT+ + V KPHN+SAIIR+ DA V+E++ VWP +T Sbjct: 1 MTPERVQRMHDILRKRQPDLTLITDAVFKPHNLSAIIRSCDAFAVNELNVVWPYDDYQTF 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS +V VKTH+ + A+ K QG QI+A H D AV +IDYT+PT I+MG Sbjct: 61 RGRAMGSQQYVNVKTHKDVSQAIQGFKQQGYQIVAAHFCDQAVPHYDIDYTKPTAIVMGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ +A+ L D II+PM GMVQSLNVSVA+ALIL EA QR+N GM + L Sbjct: 121 EKNGVSAKAMDLVDHSIIVPMEGMVQSLNVSVAAALILSEAMHQRKNKGM--LGENQLDS 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADW 221 Q FE YP LAK K+ G+ YP + + G+ A + Sbjct: 179 ETYQIQFFEWCYPDLAKRCKKLGMAYPKLKENGDFVEPAAF 219 >UniRef50_Q0AB97 tRNA guanosine-2'-O-methyltransferase n=2 Tax=Ectothiorhodospiraceae RepID=Q0AB97_ALHEH Length = 220 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 105/216 (48%), Positives = 147/216 (68%), Gaps = 2/216 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M R R+ + L RRQPDL V ++QVHKPHN+SAI+RT DAVGV HAV Sbjct: 1 MTARRLHRMRQTLERRQPDLQVLLDQVHKPHNLSAILRTCDAVGVPRAHAVSRHQDFTVH 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A++G+ WV V+TH + AV ++GQGM++ A HLS+ AVD+R++DYT+P C+L+G Sbjct: 61 RAASSGTGQWVAVETHADLPAAVRAVQGQGMKVYAAHLSEQAVDYRQVDYTKPCCLLLGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G+++E ALAD +IIPM G+ SLNVSVA+A+IL+EAQRQR AG Y E + E Sbjct: 121 EKEGVSEEGAALADGHVIIPMFGLGASLNVSVAAAVILFEAQRQRLAAGQY--ETPRMAE 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 AE R L E +P +A+ +++G PYP +++ G + Sbjct: 179 AEITRTLVEWLHPRIAERCRKEGRPYPALDEDGGVI 214 >UniRef50_A4SEW2 tRNA guanosine-2'-O-methyltransferase n=10 Tax=Chlorobiaceae RepID=A4SEW2_PROVI Length = 232 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 2/216 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R+ RI +MLA RQPDLTV M+ V+KPHN+SAIIR+ DAVG+H+++AV + T Sbjct: 2 IAPERFLRIKKMLASRQPDLTVVMDNVNKPHNLSAIIRSCDAVGIHDLYAVSSKKSIHTT 61 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +AAAG+ W + + IG L +GMQ+LA ++ + DFR ID+T PT I++G Sbjct: 62 QNAAAGAGRWTNLHLRKDIGTLCRKLGMEGMQVLAATNTEESRDFRTIDFTLPTAIVLGA 121 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G++ EA+ AD I IPM GMV+SLNVSVA+ALIL+EA+RQR GMY L E Sbjct: 122 EWEGVSAEAIQAADMAITIPMYGMVESLNVSVAAALILFEAERQRSLKGMY--RTRRLEE 179 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 + ++LLFE YP L++ + KG YP +++ G I Sbjct: 180 SLYRKLLFELSYPRLSRQLREKGGAYPELDEDGGIV 215 >UniRef50_C1XS02 rRNA methylase n=2 Tax=Bacteria RepID=C1XS02_9DEIN Length = 228 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 113/223 (50%), Positives = 149/223 (66%), Gaps = 10/223 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV--------W 52 M P R+ +I ++LARRQPDLTV ME+VHK HN SA++R+ DAVGV E H + Sbjct: 1 MTPERWQKIQQVLARRQPDLTVLMERVHKWHNFSAVLRSCDAVGVLEAHLIPAAHGIPTE 60 Query: 53 PGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + R A+ + + WV ++T+ A A L+ +G I A H S A+D+RE+DYTR Sbjct: 61 DQNPSRHTAATSGSAAKWVGLRTYPDTPSAFADLRSRGFVIYAAHFSHKAIDYREVDYTR 120 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 PTCIL+G EK G+T+EA LAD I+IPM+GMVQSLNVSVA+A+IL+EAQRQR AGMY Sbjct: 121 PTCILLGTEKWGVTEEAATLADGHIVIPMMGMVQSLNVSVAAAVILFEAQRQRIQAGMYD 180 Query: 173 RENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 R L A QRLLFE YP A+ +++G YP ++ +GEI Sbjct: 181 R--PRLEPALHQRLLFEWAYPDWAERCRKEGRDYPALSPEGEI 221 >UniRef50_B3QXG6 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXG6_CHLT3 Length = 219 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 144/215 (66%), Gaps = 2/215 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ R+ +I +L +RQPDLTV ME V+K HN++AIIRT DAVG+ +VHAV +RT Sbjct: 4 VSSDRFQQIKRLLDKRQPDLTVVMENVNKAHNLAAIIRTCDAVGIPKVHAVALRPEIRTK 63 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++A+G+N WV V+ H + D + L+ G QI H S A DFR +D+T+PT +++G Sbjct: 64 QNSASGANRWVDVQIHNSTEDVFSTLRQGGFQIFVAHFSPQATDFRAVDFTKPTALVVGA 123 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E GI++ A++LAD + +PM+GMV+SLNVSVA+A++L+EAQRQR G Y + L E Sbjct: 124 EWEGISETAISLADGSLYVPMVGMVESLNVSVATAIMLFEAQRQRTEKGFY--DKPRLDE 181 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEI 215 A QRLLFE YP +A K+K P +N GEI Sbjct: 182 ATYQRLLFELTYPQIATAYKQKDKALPKMNMDGEI 216 >UniRef50_A4BEK2 Putative tRNA methyltransferase n=1 Tax=Reinekea blandensis MED297 RepID=A4BEK2_9GAMM Length = 224 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 128/214 (59%), Gaps = 6/214 (2%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 RY + ++L +RQ D+T+ ++VHK NVSAI+RTAD+VG+ VH V P A Sbjct: 5 RYLKFQQVLNQRQNDMTILTDKVHKSQNVSAIMRTADSVGIPTVHMVKPERGRLVYHHTA 64 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 G++ +V V + T+ + + L+ GM + A H SD A+ +RE DYTRP +++G EK G Sbjct: 65 GGASRFVDVIVYETLSEGIQSLRNAGMALYAAHWSDRAISYREADYTRPFALILGAEKYG 124 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE-- 182 I+ EA AD+ +IIPM+G +SLNVSVAS +IL EA QR M + + LP+ + Sbjct: 125 ISPEAADAADEHLIIPMVGACESLNVSVASGIILQEAMHQR----MAQQAYTQLPDQDST 180 Query: 183 QQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 LF +P +A + LPYP +++ G++ Sbjct: 181 YHNTLFRWLHPKMAAFCDARQLPYPQLDEDGDMI 214 >UniRef50_O67577 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Bacteria RepID=TRMH_AQUAE Length = 211 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 86/198 (43%), Positives = 121/198 (61%), Gaps = 3/198 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV-WPGSRMRTMASA 63 R R+ E+L +RQ DL V + V HN SAI+RT DAVGV ++ G + + Sbjct: 11 RLKRLREVLEKRQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEGKKAKINEGI 70 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 GS+ WV ++ + K +G QI+AT LS +V+FRE+DYT+PT +++G E Sbjct: 71 TQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLVVGNELQ 130 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQ 183 G++ E + +AD+ I+IPM GM QSLNVSVA+ +ILYEAQRQR+ GMY R L E E Sbjct: 131 GVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKGMYSR--PSLSEEEI 188 Query: 184 QRLLFEGGYPVLAKVAKR 201 Q++L + Y + K KR Sbjct: 189 QKILKKWAYEDVIKERKR 206 >UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PC85_CHIPD Length = 197 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 4/194 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R R+ +L +RQ LTV +E V PHN+SA++RT DAVG+ +V+ + + R Sbjct: 1 MTPERRERLLSVLNKRQAGLTVVLENVFDPHNISAVLRTCDAVGIQDVYVLNTTTARRKR 60 Query: 61 --ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 +++ + W+ V +A ++ + +I THL+ +A E+D+T ++ Sbjct: 61 WGHKSSSSAAKWLTVHQFSDTATCMAVVREKYDKIYTTHLAADAKSLYELDFTGSVALVF 120 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E+ G+++E L D + IIP +G+++SLN+SVA A+ +YEA RQ+ AG Y ++N L Sbjct: 121 GNEQEGVSEEIRKLCDGNFIIPQVGIIKSLNISVACAVSIYEAMRQKSIAGHYEQKN--L 178 Query: 179 PEAEQQRLLFEGGY 192 P+A+ LL E G+ Sbjct: 179 PDAQYNALLEEWGF 192 >UniRef50_B8IYB0 tRNA guanosine-2'-O-methyltransferase n=14 Tax=Desulfovibrionales RepID=B8IYB0_DESDA Length = 250 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM- 60 R AR+ E+LA RQPDLT+ + +H PHNVSAI R+ DA GV V+ + + + Sbjct: 60 TERRKARLLEVLAHRQPDLTLVLANIHDPHNVSAIYRSCDAFGVSRVNLYYTNTPFPALG 119 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A + WV+ H+ + L+GQ MQ+LAT S A R+ D+TRPT ++MG Sbjct: 120 RKTSASARKWVESARHKDSAALMESLRGQNMQVLATSCSPTARPLRDWDFTRPTAVIMGN 179 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E +G+ E L +AD ++ IPM GM+QS NVSVA+A+IL EA RQR+ AGMY + Sbjct: 180 EHSGVEPELLQMADGELYIPMYGMIQSFNVSVAAAIILSEAARQREAAGMY--ATPRMAA 237 Query: 181 AEQQRLLFEGG 191 A + L E Sbjct: 238 AALEEKLQEWL 248 >UniRef50_B9L1B3 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Bacteria RepID=B9L1B3_THERP Length = 217 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 13/210 (6%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R AR+ E+LARRQPDLTV +E VH PHNVSA++R+ DAVG+ VH V+ + Sbjct: 5 ITERRLARMREVLARRQPDLTVVLENVHDPHNVSAVLRSCDAVGLLRVHLVYTLEEFPEL 64 Query: 61 A-SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSD--NAVDFREIDYTRPTCIL 117 + + + + W+++ H +I L+ QG I T+L D +VD ++D T+P ++ Sbjct: 65 SENVSGSALKWLELVFHPSIEACYRTLRSQGFTIYTTYLGDPARSVDLYDLDLTKPVALV 124 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 G E+ G++ EA+A AD + +IPM+GMV+SLN+SVA A+ LYEA RQR+ AG Y R Sbjct: 125 FGNEQRGVSDEAVAGADGNFVIPMMGMVRSLNISVACAVSLYEALRQRRLAGHYAR--PK 182 Query: 178 LPEAEQQRLLFEGGYPVLAKVAKRKGLPYP 207 L E + L +R+G P Sbjct: 183 LSPIELEERLQRWL--------EREGRALP 204 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 212 bits (540), Expect = 8e-54, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PG 54 + P +Y+ + ++L R + V +++V PHN+ +I+RTA+ GVH + Sbjct: 129 VTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFGVHGIILPKRRSA 188 Query: 55 SRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 S T+ ++ G+ V++ + + LK +G+ I + + ++D+ P Sbjct: 189 SVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEEYSY-QVDFGGPC 247 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E GI++ + D+ I IPM+G + SLN SVA +I+YE + R Sbjct: 248 AVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGR 298 >UniRef50_A6Q996 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Epsilonproteobacteria RepID=A6Q996_SULNB Length = 216 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASA 63 R RI ++L +QP L V ++ VH N+SAI+RT DAVGV ++ +R + Sbjct: 12 ERIDRIDQILCCKQPTLKVMLDDVHSSQNLSAILRTCDAVGVQHLYYTTSDNRDLRIHKT 71 Query: 64 -AAGSNSWVQVKTHRTIGD--AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 G++ WV+ T + + +G Q++ THL + AV FRE+DYT+PT I+MG Sbjct: 72 ITQGAHRWVERTRISTEEQRVFLQKKQKEGYQVVVTHLEERAVPFREVDYTKPTIIVMGN 131 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ E + LAD IIIPM GMVQSLNVSVA+ALILYEA+RQ AG Y + L + Sbjct: 132 EKDGVSSETVELADTVIIIPMQGMVQSLNVSVAAALILYEAERQLAEAGKY--DTPQLSK 189 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYP 207 E++++ Y +A+R P Sbjct: 190 EEREKIKSGWLY--RDNIARRSKGKIP 214 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 5/166 (3%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRT 59 N +Y + +++ ++ V ++Q+ PHN AI+RT+ A GV + + Sbjct: 74 NDFKYENL-DIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVDAIIIPKDNAVEVTPV 132 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + ++G + + + + + LK + + + + + EID+ C++ G Sbjct: 133 VIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEGK--PYYEIDWQGKICLVFG 190 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E GI + D+ + IPM V+SLNVSV+S +IL+EA++QR Sbjct: 191 NEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 7/176 (3%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + + ++ V ++ + PHN+ +I+RTADA GV V S Sbjct: 73 IAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G + +DNA D+R++ P Sbjct: 133 ALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R G Sbjct: 192 AIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQVGD 247 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 7/169 (4%) Query: 4 TRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 +Y + ++L +++ + ++++ PHN+ AIIR+A+A GVH + + Sbjct: 77 YKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVN 136 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+ +AG+ +++ I + + LK +G+ I+ T ++ F E++Y P + Sbjct: 137 ATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAE-KSFEELNYDFPVAFV 195 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +G E G+++ L D + IPM G + SLN SVA+++++Y+ +R+ Sbjct: 196 IGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRK 244 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 6/170 (3%) Query: 1 MNPTRYARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGSR 56 + P YA + E+L+ R+ L + ++ V N+ AI+RTA+ G V Sbjct: 115 LKPYAYADLEEVLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPV 174 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 A+G+ +++ V I + LK +G + + D + D P I Sbjct: 175 TAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGG--DLYQADLKGPLVI 232 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +MG E GI+ + D + IPM G V SLNVSVA+AL++YEA RQR Sbjct: 233 VMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQRN 282 >UniRef50_C9RX94 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Geobacillus RepID=C9RX94_GEOSY Length = 247 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 9/206 (4%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS 62 P R R+ E+L R +TV +E V PHN +A++RTA+A GV +VH V + Sbjct: 32 PRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAPFSPNRL 91 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 ++ W+ + I A+A LK QG Q+ A++L + + +ID ++PT +L G E Sbjct: 92 VTRYADQWLTLHHKPDIKTAIADLKSQGYQVYASYLGEGTIPVSDIDLSQPTALLFGNEH 151 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ-RQRQNAGMYLRENSMLPEA 181 +G+++EAL LAD +IPM G VQS N+SVA+AL LY+ R R+ AG + L Sbjct: 152 SGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYDVTERARRQAG----RHYYLLPG 207 Query: 182 EQQRLLFEGGY----PVLAKVAKRKG 203 E++ L + + P + K +++G Sbjct: 208 EKKALYEQWMWQTLNPRIRKQLQQQG 233 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 11/181 (6%) Query: 2 NPTRYARICEMLARRQ----PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 P +Y + +++ R + + V ++ + PHN+ AI R+ +A G+ V P R Sbjct: 178 TPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFGMQG--MVIPQRRA 235 Query: 58 R----TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 T+ AAG+ S + V + A+ +LK QG + T S A D+ RP Sbjct: 236 AGVTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTT-SRGADPIYSADFQRP 294 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 +++G E GI+ DQ + IP+ G +SLN SVA+ + LYE RQR + Sbjct: 295 IALVVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQRSPHHLKRP 354 Query: 174 E 174 E Sbjct: 355 E 355 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 7/175 (4%) Query: 1 MNPTRYARICEMLARRQPD----LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + L +++ + ++ + PHN+ +I+RTADA GV V S Sbjct: 73 IAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSV 132 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G + T + NA D+R ++ Sbjct: 133 TLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEAN-NATDYRNLEADMSL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R + G Sbjct: 192 AIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKRHDVG 246 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 4/160 (2%) Query: 9 ICEMLAR-RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + ++L +P L + ++ + PHN+ A +RTADA+GVH V A S T++ A Sbjct: 85 LEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVAC 144 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V T + + LK G+ I+ T +S + D + +MG E G+ Sbjct: 145 GAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES-DLYHCNLPDSAAWVMGNEGDGM 203 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D + IPM G V+S+NVSV++ ++L E +RQR Sbjct: 204 RRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 4/165 (2%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMA 61 T I E+ + L + ++ + PHN+ +I+RTADA V V S ++ Sbjct: 95 TDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNVCGVIIPKHRSVGVTPVVS 154 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 + G+ + + + + LK +G I T ++ D + +++G E Sbjct: 155 KTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNGTPSDCWNTN--GKLALVIGNE 212 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 GI+ D+ I IPM G VQSLN SVA+A+++YE R R+ Sbjct: 213 GKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRR 257 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 2/168 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 + +Y + E++ + +L V +Q+ PHN+ AI+RT DA GV V S Sbjct: 69 IQDYKYHSLQEIIKGAKNNLIVLCDQLEDPHNLGAILRTCDACGVDGVVVGKHRSVGLTS 128 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T+A + G+ + V+V + A+A LK G ++A + +AVD+ E + P +++ Sbjct: 129 TVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDAVDYTEFNVDMPLVLVV 188 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G E GI++ D IPM G V SLNVSVA+ ++L++ R+R+ Sbjct: 189 GSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRRK 236 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 8/171 (4%) Query: 4 TRYARICEMLAR-----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--R 56 YA + ++L + +P + ++ + P N+ AIIRTA+ GV + S Sbjct: 75 YPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRTAECAGVDGIIIPSHKSAEV 134 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T++ +AG+ + + + + + +LK +G +L + PT + Sbjct: 135 NPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGADAKAR-QSYFNTSIPSPTAL 193 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 ++G E GI + D + IPM G + SLN SVA+AL++YE RQR N Sbjct: 194 VIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVLRQRLN 244 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEML--ARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PG 54 M Y+ + EM+ A++ + + ++++ PHN+ +IIRTA+ G H V Sbjct: 72 MPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVAGCHGVIIPKHRAC 131 Query: 55 SRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T +AG+ +++ I + +LK + I + + + + P Sbjct: 132 EVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWIYGA-CGEASQTHTQANLKGPI 190 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E GI++ DQ I IPM G +SLN S A+++++YE RQR Sbjct: 191 GLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQR 241 >UniRef50_C4L0U6 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Bacillales RepID=C4L0U6_EXISA Length = 254 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 7/208 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R R+ E+L R +T+ E V PHN SA++R+ADA GV +H V ++ + Sbjct: 39 LMPDRIKRMYEVLNTRTNHITILTEGVDDPHNQSAVLRSADAFGVQTLHVVEGRAKFKPN 98 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 + A ++ WV V H +I +A+ LK G Q+ AT LS+ A+ E+D ++PT +L G Sbjct: 99 SIIAKSADRWVDVVEHGSIEEAIDALKESGYQVYATALSEEAIPLEEVDVSKPTVLLFGN 158 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E +G+++ AL AD + +IPM G VQSLN+SVA+A+ LY+ + ++ + + LP Sbjct: 159 EHSGVSETALHKADGNFVIPMQGYVQSLNISVAAAISLYDVTTRSRH---IVTDGYELPV 215 Query: 181 AEQQRLLFEGGYPVLAKV----AKRKGL 204 +Q R+ + L K K+KG+ Sbjct: 216 EDQARIFKDWMVKSLPKRTLGLYKQKGV 243 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 3/160 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + ++LA+ L + ++ V PHN+ A +R ADA GV V S T++ A Sbjct: 85 DLDDILAKHASPLLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVAC 144 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V + + + HL+ QG+ I+ T + D + T I+MG E G+ Sbjct: 145 GAAETVPLVRVTNLARTMRHLQEQGIWIVGTA-GEATHDIYQAKLTGSLAIVMGAEGDGM 203 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D I IPM G V SLNVSVAS + L+EA RQR Sbjct: 204 RRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQR 243 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 7/173 (4%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA E L +++ + ++ + PHN+ +I+RTADA GV V S Sbjct: 73 VAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G I T + NA D+R++ Sbjct: 133 ALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEAN-NATDYRDLQADMSL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R Sbjct: 192 GIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVYRKRHQ 244 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%) Query: 3 PTRYARICEML-----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 P +Y+++ +L ++P + ++ + P N AIIRTADAVGV V S Sbjct: 77 PFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAVGVDGVIIPKRRSVD 136 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ A++G+ V + + ++ LK Q + IL T + + F E +Y P Sbjct: 137 VNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGDRGIFEE-NYNIPLA 195 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E +G++ D IPMIG V SLN SVA+A++LYE RQ+ N Sbjct: 196 LVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQKTN 247 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 6/171 (3%) Query: 1 MNPTRYARICEMLA---RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + RY I E++ + L + ++ + PHN+ AI+RT DA+GV V S Sbjct: 73 IEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIGVDGVIIGKNRSVG 132 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A + G+ V+V + + LK + ++ L D + D+R++DY P Sbjct: 133 LNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDL-DKSQDYRQVDYNMPLV 191 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I++G E GI++ D ++++PM+G V SLN SVA+A+ILY+ R Sbjct: 192 IVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYNSRN 242 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 11/173 (6%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P Y + +++ + + + + ++ + PHN+ AIIRTA+A G V P R Sbjct: 195 VAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFGAQG--MVLPQRR 252 Query: 57 MR----TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + T+ AAG+ V + A+ LK G I T ++ + D Sbjct: 253 VAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGT-VAGKQTALHQADLRE 311 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 P +++G E G++ D I IP+ G SLN SVA+A+ LYE RQR Sbjct: 312 PMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQR 364 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM- 57 + + + E+LA R L V ++ + PHNV AIIRTA+AV V + Sbjct: 88 LTSVTFYTLDEVLAAPRNSSPLLVILQGLEDPHNVGAIIRTAEAVAADSVIMIEGKGAPI 147 Query: 58 -RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ A+AG+ S ++V +++ + L +G I+A + + + +ID+ RPT + Sbjct: 148 SATVHKASAGALSHMRVCKVKSLVKTLDLLHERGFSIVAADM-EAEHNHTDIDWKRPTVL 206 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +MG E G+ E DQ + IPM G V+SLNVSVA+ ++LYEA RQR Sbjct: 207 VMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQR 255 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 4/163 (2%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASA 63 LA + V ++ V PHN +IIR+AD G+ + S ++ Sbjct: 97 VDEFFAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKV 156 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ +WV + V LK +G I A+ + + + T ++MG E Sbjct: 157 SAGALAWVPFVEVTNLVRTVERLKKEGFWIYGADAGGKALP--NLTFPKKTVLIMGNEGR 214 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+++ D+ + IP G + SLNVSVA+ ++LYE R+++ Sbjct: 215 GMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYEISRKKE 257 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 8/166 (4%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTM 60 + ++ + L + + L + ++ + PHN+ +I+R+ADA GV V + P R + Sbjct: 92 DFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADATGVSGV--IIPKRRASGLTSVV 149 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A + G+ V V + LK +G I T + + D+R+ + T +++G Sbjct: 150 AKTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAMEGD--DYRKWNANGKTVLVIGN 207 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 E GI+ L DQ + IPMIG VQSLN SVA+ ++LY+A R Sbjct: 208 EGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFNSRH 253 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 11/171 (6%) Query: 5 RYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--- 57 Y + ++L + + + ++ + +N+ +I+RTADAVG H V V P R Sbjct: 110 DYVEVDDILKIAQDKGEDPYIIILDGITDAYNLGSILRTADAVGAHGV--VIPKRRAIGL 167 Query: 58 -RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 ++ A+AG+ +V V I + +LK + + I+ T LS F E D P + Sbjct: 168 NAAVSKASAGAIEYVPVARVTNISQTIEYLKKKNIWIVGTDLSGE-KPFFEADLKGPVAL 226 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 ++G E G+ + D + IPM G + SLN +VA+A+I+YE +RQR Sbjct: 227 VIGSEGEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQRNF 277 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 7/170 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PG 54 + P Y + E+L A+ +P + ++ + PHN+ A++RTA+ G H V G Sbjct: 79 VAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGAHGVIIPKRRGG 138 Query: 55 SRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + T+A A+AG+ +V + + V LK G+ I+ + + D + D+ P Sbjct: 139 AITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAM-DAPRPYFRQDFRGPV 197 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 +++G E GI+ D + IPM G V SLN SVA AL++YE RQ Sbjct: 198 GLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U211_9FLAO Length = 229 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 8/216 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R ++LA R TV +E +++PHN SA++RT D GV ++H + R Sbjct: 18 LTDKRKQTFQKVLAERTRHFTVVLEDIYQPHNASAVVRTCDIFGVQDLHVIENRYINRVS 77 Query: 61 ASAAAGSNSWVQVKTHR----TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 G+ W+ K ++ + HLK G QI+AT +A ++ + T Sbjct: 78 KYVTKGAQKWITTKRYKTDGDNTKTCLNHLKTAGYQIIATSPHADANLLQDFKIDKKTAF 137 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENS 176 + G E TGI+ AD + IPM+G +S N+SVA+A+IL + + +N+ R + Sbjct: 138 VFGAEATGISDTVKEHADGFLKIPMVGFTESFNISVAAAIILQDVTTRLKNS----RIDW 193 Query: 177 MLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQ 212 ML E+++L + + V K + Y + + Sbjct: 194 MLSNDEKEQLYLQWIKETIKNVTKIEERFYQQLEDE 229 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 3 PTRYARICEMLARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--- 56 P Y + +++ + + + V + + PHN+ AIIRTA+A+G + V P R Sbjct: 180 PYGYIELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIGAQGL--VIPQRRASG 237 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ AAG+ V + A+ LK G I T S + +++ P Sbjct: 238 ITSTVMKVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAAS-GSEPVHTVNFKGPIV 296 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 +++G E G+ D + IP+ G SLN SVA+ + LYE RQR +YL Sbjct: 297 LVIGSEGEGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQRSLNTLYL 353 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 + + A L + ++ V PHN+ A +RT DA GV + S T+A A+G Sbjct: 88 LDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDAAGVKGLVVTKDQSVGLTPTVAKVASG 147 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + V V + + K +G ++ + E+D P ++MG E G+ Sbjct: 148 AAETVPVYRVTNLARCLDRFKQRGYWVVGAA-GEAERTLYELDLRLPLVVVMGAEGVGLR 206 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + D + IPM+G V+SLN+SVA+ ++LYE RQR Sbjct: 207 RLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRSR 247 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 11/174 (6%) Query: 4 TRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--- 56 YA + ++ + + + ++++ PHN+ +I+RTADAVG H + V P R Sbjct: 78 YEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGAHGI--VIPKRRAVG 135 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A A+ G+ + V + + +K +G+ ++ T S DFR +D P Sbjct: 136 LTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARE-DFRNMDGNMPLA 194 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +++G E G+ + D I +PM G V SLN SVA+ L++YE R+R G Sbjct: 195 LVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVG 248 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 3/153 (1%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQV 73 P L + ++ V PHN+ A +RTADA G V S T + A G+ + + Sbjct: 94 ETPPLILVLDGVTDPHNLGACLRTADAAGATAVIVPKDKSATLTPVVRKVACGAAEVIPL 153 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + + L+ +G+ ++ T + + + D T P ++MG E G+ + Sbjct: 154 VAVTNLARTLEKLQQRGLWVVGTA-GEAEQEIYQQDLTGPLVMIMGAEGKGMRRLTREHC 212 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + +PM G V SLNVSVA+ + L+EA RQRQ Sbjct: 213 DFLVKLPMAGSVSSLNVSVATGVCLFEAVRQRQ 245 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 4/154 (2%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWV 71 AR +P L V + + PHN+ AIIRTA+A G H + G + +AG+ + Sbjct: 102 ARGEPPLLVIADSIEDPHNLGAIIRTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHL 161 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 V + + LK +G+ I S D + D T P+ +++G E G+++ Sbjct: 162 PVARVTNLVSTIKELKARGVWIYGADASGARWD--QTDLTGPSALVIGSEGFGLSRLVRE 219 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + +PM G V SLN SVA+ +++YEA RQR Sbjct: 220 TCDALLSLPMRGEVNSLNASVAAGILMYEAVRQR 253 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 + +L + L + ++ V PHN+ AI+RTAD GV V A S T+ + G Sbjct: 35 LDGILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRVSVG 94 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + V + + L+ +G+ I T E D+T P ++MG E G+ Sbjct: 95 AAEKVPFIQVTNLARTMKQLQSRGIWIFGTS-DKGDRGLYETDFTGPAALVMGAEGEGMR 153 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D + IPM G + LNVSVA+ + LYE RQR Sbjct: 154 RLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQR 192 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 7/169 (4%) Query: 1 MNPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + Y + +L + ++ L V ++++ PHN+ AIIR++ A G V S Sbjct: 75 LKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAAGADGVIITEKASVE 134 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + + G + + + + LK +G A + + + +T Sbjct: 135 VTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATMEGE--PYYSVSFTDKAA 192 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++ G E GI +D + IPM + SLNV+ ++A++L+E +RQ Sbjct: 193 LIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRRQ 241 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + +YA + ++L A QP L V ++ + PHN+ AIIR+ADA+G H V + Sbjct: 107 LRGFKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADALGAHGVVIAKDRAV 166 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A A+AG+ ++ I A+ LK G+ + A + D P Sbjct: 167 QVTGTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAADV-DAKEPMWSARLDGPL 225 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E G+ L D + IPM G V SLN SV++ ++LYE RQR Sbjct: 226 ALVVGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQR 276 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 7/172 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P Y + E++A R + L + ++ + P N+ A++RTADA GVH + S Sbjct: 97 VAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGVHGILLPRRHSV 156 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ +V V I + LK QG I + + + + T Sbjct: 157 PLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEI-YDRANLTGAL 215 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E G+++ L D + +PM+G + SLN SVA A+++YEAQRQR+ Sbjct: 216 VLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQRR 267 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 9/171 (5%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 ++P I + + + ++QV PHN+ AIIRTA A G H + ++P R Sbjct: 78 VSPREMVEIAR--EKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHGL--IYPRKRSADI 133 Query: 60 ---MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + A+AG+ + + + I +A LK G+ I T + + DY P + Sbjct: 134 TPVVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVR-GTRPYYSADYKGPVGL 192 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 ++G E G+ + D + IPM G + SLN SVA+ ++++E RQR++ Sbjct: 193 VIGNEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRS 243 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 4/165 (2%) Query: 4 TRYARICEMLAR-RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 RYA + ++L +P L + ++ V PHN+ A +R ADA GVH V + T+ Sbjct: 80 RRYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATV 139 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A+G+ V + + LK G+ I+ T +D + TRP ++G Sbjct: 140 HKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTA-ADAPDTLDSVTLTRPLAWVLGA 198 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E G+ + D + IPM G ++SLNVSV++ + L+E RQ Sbjct: 199 EDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQH 243 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 9/167 (5%) Query: 1 MNPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 + P Y + E++ + + ++ + PHN+ AIIRTA+A GV + + P R Sbjct: 101 VAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASGVKAI--IIPKRRA 158 Query: 58 RTM----ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + A+AG+ + V + DA+ LK +G I T L++ + D+ +I P Sbjct: 159 AVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERSEDYTKIAKDVP 218 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 I++G E G+++ D +PM+G +QSLN SVA+ +I+YE Sbjct: 219 LAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYE 265 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLARRQ--PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 + P Y + +++ R L V ++++ PHN AI+RTA+A G V Sbjct: 87 VAPYAYVDLDDVIRRDTGFAPLVVVLDEIADPHNFGAILRTAEASGAQGVVIGKRRQAQV 146 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T +A AAAG+ + V + A+ LK G I+ + + V + E+DY PT + Sbjct: 147 TDVVAKAAAGALETLPVARVANVAQALQRLKQAGYWIVGADV-EAKVPYTEVDYRGPTAV 205 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E G+ + D + IP++G VQSLN SVA+ ++LYEA RQR Sbjct: 206 VIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEAVRQR 254 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 6/172 (3%) Query: 1 MNPTRYARICEMLARRQ---PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + P Y + +L Q + + + + PHN+ AIIRTA+A+G + + Sbjct: 198 VAPYSYLELDTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGAQGLVVPQRRAVG 257 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A AAG+ V + A+ LK G I + A ++++ P Sbjct: 258 ITSTVAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATA-AKPIYSVEFSGPVV 316 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E TG++ A DQ + IP++G SLN SVA+ + LYE RQR + Sbjct: 317 LVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQRSS 368 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 5/167 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--R 58 MN + E L+ +P L + ++ V PHN+ A +R ADA+G H V A S Sbjct: 80 MNYVDLDDVLENLS--EPPLLLILDGVTDPHNLGACLRVADAMGAHAVIAPKDRSATLNA 137 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T++ A G+ V T + + LK G+ I T + + D D + P +M Sbjct: 138 TVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEAD-TDLYHFDASGPLAWVM 196 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E G+ + D + IPM G V+SLNVSV+S ++L E++RQR Sbjct: 197 GAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQR 243 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 3/169 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASA 63 + + L R + + + + PHN+ A+IR+A+A G + + T+A Sbjct: 170 FEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKV 229 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 AAG+ + + + A+ LK G Q++ T + E+ P +++G E Sbjct: 230 AAGAVEHLPIARVTNLNQAIERLKEAGYQVVGT-QEKASQALYELKLDGPLVVVVGSEGK 288 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 GI+ D + IP+ G SLN SVA ++LYE RQR+ + L Sbjct: 289 GISLLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMRQRRANQIDL 337 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%) Query: 6 YARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMA 61 Y + +++ ++ + V ++ + PHN+ A+IR+AD GV V + T Sbjct: 78 YLDLDDIIEKKRGEHAFVVVLDGIEDPHNLGALIRSADGAGVDGVVIPERRAVGVTGTAM 137 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQ-GMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A+AG+ +V + I ++ LK + + + ++ EIDY +++G Sbjct: 138 KASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLD-ERGTQNYDEIDYNMSLALVLGA 196 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 E G+ D + IPM G V SLNVSVA +++YE RQR+ Sbjct: 197 EGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQRR 242 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 3/160 (1%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TMASAAAGSN 68 + L +L V ++ V P NV ++RTADA G V + + A GS Sbjct: 110 DDLQSSDRELIVVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVRATMGSL 169 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + V T + A L+ QG+++LAT L +++ + ++D P I+ G E G+++ Sbjct: 170 FHLPVITGVAEQEVAAFLERQGIRLLATALDSSSL-YHDVDLRSPVAIVFGNEGAGVSKV 228 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 L AD+ + IP+ G +SLNV+VA+A+ILYEA+RQR+ A Sbjct: 229 ILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQRRVA 268 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + ++LA + + + +++V PHN+ A+IRTADA GVH V S Sbjct: 74 VAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGVHGVIIPKRRSV 133 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ V V + + L+ G + V D T Sbjct: 134 SLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAEGTEV--YRSDLTGAR 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I++G E G+++ D+ + +PM G + SLN SVA ++++YE RQR Sbjct: 192 VIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQR 242 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 3/152 (1%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVK 74 P + ++ V PHN+ A +R+A+A GV V + +T + AAG+ + Sbjct: 103 NPPFLLVLDGVQDPHNLGACLRSANAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLF 162 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 T + + LK G+ S + + T P +++G E G+ + D Sbjct: 163 TVTNLATCLERLKKCGIWCYGLDQSGTRL-IYDAPLTGPLALVLGAEGKGLRRLTKVCCD 221 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 + IPM+G V SLNVSVA+ + L+E RQRQ Sbjct: 222 DLVAIPMVGTVGSLNVSVAAGVGLFEVVRQRQ 253 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 6/171 (3%) Query: 1 MNPTRYARICEMLA---RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 ++ + I E++A + + L V ++++ PHN+ AI+RT D VGV V Sbjct: 70 IDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVGVDGVIIGKHRGVK 129 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A + G+ V+V + + LK +G + DN+ D+R+ Y P Sbjct: 130 LTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADF-DNSQDYRQASYDMPLV 188 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E GI+ D + +PM G V SLN SVA A++LY+ QR Sbjct: 189 LVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQRN 239 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 7/170 (4%) Query: 2 NPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--S 55 RY + ++A R P DL + ++ + PHN+ A+IR+A G + + S Sbjct: 74 TAYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGANGIILPERRAAS 133 Query: 56 RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ +AG+ + + + A+ LK +G I + + DY Sbjct: 134 VTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARAD-QSVSDPDYQGAVG 192 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++MG E G+ D I IPM+G + SLNVSV+ +IL+E +R+ Sbjct: 193 LVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRKN 242 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 6/172 (3%) Query: 1 MNPTRYARICEMLARRQ--PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVH--AVWPGSR 56 M P Y I E+ +++ L + ++++ P N AIIR+A+ +G + Sbjct: 92 MAPFPYTSI-ELFNQQEITSPLFLILDRIQDPFNFGAIIRSAEIMGADGIFSGTHEQCEV 150 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + +AG+ + V + + K G+ I+ T + + + ++ +PT + Sbjct: 151 TSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNGINIVGTAM-QASEKLNDYNFQQPTAV 209 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 ++G E TGI+ E A + IP G +SLNV+V+++++LYEA RQR + Sbjct: 210 IVGNEGTGISPELQAECTHLVRIPQQGKTESLNVAVSASILLYEASRQRNFS 261 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMRTMASAAAGSNSWVQVKTH 76 + ++ V PHN+ A +R+A+A GV V T+ A+AGS S V V T Sbjct: 93 GFLLVLDGVLDPHNLGACLRSAEAAGVDAVILPRDNACPVNATVRKASAGSASRVPVCTV 152 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + ++ L+ G ++ + + +D P ++MG E+ G+ + D Sbjct: 153 TNLSRTLSSLQEAGFWLVGMA-GEGSRSLYALDLDMPLVMVMGGEEKGLRRLTREHCDYL 211 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IPM+G ++SLNVSVA+ + L+EA RQR+N Sbjct: 212 AHIPMMGAIESLNVSVATGICLFEAARQRRN 242 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 6/163 (3%) Query: 7 ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA----S 62 + +++ + + L V ++ V PHN+ AI+R+A+A G V P R + Sbjct: 84 DDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEAFGALAVIL--PKDRTAPLNAGAIK 141 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A+AG+ + + + A+ L+ + + ++ A +D P ++MG E Sbjct: 142 ASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEAGAPLIGTLDCKGPLALVMGNEG 201 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G+ + DQ IPM G V SLNVSVA+ + LYE RQR Sbjct: 202 SGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQR 244 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 4/163 (2%) Query: 7 ARICEMLARRQ-PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASA 63 + + +L +R+ P L + ++ V PHN+ A +R+A+A GV V A + + Sbjct: 84 SALLSLLKKRETPALLLILDGVKDPHNLGACLRSANAFGVRAVIAPKDRAVGVTPVVRKV 143 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 A G+ + + L+ +G+ I+ T + + +EID T I++G E Sbjct: 144 ACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETL-IQEIDLTGDIAIVLGSEGA 202 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+ + D IP+ G V+SLNVSVA + LYE QRQR+ Sbjct: 203 GLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQRE 245 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 3/147 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGSRMRTMASAAAGSNSWVQVKTHRT 78 + ++++ PHN+ AIIR+A++ G V S T+ +AG+ + ++V Sbjct: 86 LIILDKIEDPHNLGAIIRSAESFGFDAVIIPERRSASVTSTVYKTSAGAINNIKVVRVTN 145 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + LK +G I ++ D D +++G E GI++ D I Sbjct: 146 LTRTIKDLKDKGFWIYGLAGEAHS-DISHADLRGKVGLVVGNEGEGISRLVRENCDMLIN 204 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQR 165 IPM+G V SLN SVA+A+ +YE RQ Sbjct: 205 IPMLGRVNSLNASVAAAISMYELLRQN 231 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 195 bits (497), Expect = 9e-49, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 7/172 (4%) Query: 4 TRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVH--AVWPGSRM 57 +Y I ++L + + V ++++ PHN +IIR+A G H + A Sbjct: 75 YKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHGIITEARNSCPIT 134 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+ A+AG+ ++V + + LK +G+ + A + + + D+ P CI+ Sbjct: 135 PTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAEKFVY-DCDFKIPICII 193 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +G E GI++ AD + IP G + S N SVA+ +I +E +QR G Sbjct: 194 IGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQRMQEG 245 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 4/163 (2%) Query: 3 PTRY--ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--SRMR 58 P Y A I + + + ++Q+ PHN AI+RT D V V + Sbjct: 77 PQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFNVDGVIILDKRQVDINA 136 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T+A +AG+ ++V V + +A+ +LK QG I AT L+ A + E+ Y P C+++ Sbjct: 137 TVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNTKAQNVSELKYDIPICLIV 196 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEA 161 G E TGI+ + L AD +I IP G + SLNVSVASA+++Y+ Sbjct: 197 GNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQI 239 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 3/154 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWV 71 A+ + + ++++ PHN+ +I+RTAD+VG H + S +T+A A+ G+ +V Sbjct: 94 AKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYV 153 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 V + + L+ +G+ I T + + D+R +D P I++G E G++ Sbjct: 154 PVVRVTNMVRTMEELQKRGLWIFGTD-AKGSSDYRTMDVDMPLAIVIGSEGFGMSCLVRE 212 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + +PM G V SLN SVA++L+LYE R+R Sbjct: 213 KCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKR 246 >UniRef50_Q9LXE4 rRNA methylase-like protein n=11 Tax=Magnoliophyta RepID=Q9LXE4_ARATH Length = 350 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 5/191 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV--WPGSRMR 58 M R R ++ R + + +E + N+SA R+ADA+G+ VH V R Sbjct: 136 MMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYN 195 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + G+ W+ ++ T + LK +G +I THL + V ++D++ PT I++ Sbjct: 196 GNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVV 255 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E GI+ EAL L+D IPM GMV S NVSVA+ ++++ A R L + L Sbjct: 256 GNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAAGILMHHAVSDRTT---RLGSHGDL 312 Query: 179 PEAEQQRLLFE 189 EAE++ L+ E Sbjct: 313 SEAEKEILMAE 323 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 6/163 (3%) Query: 6 YARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 Y + E L + +Q + + ++Q+ P N AIIR+A+ GV + S T+ Sbjct: 71 YLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETV 130 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++ G+ V + + D++ LK G I +D ++ + C+++G Sbjct: 131 VKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAE-ADGETEYYNEPFPEKLCLVLGS 189 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 E G+ ++ D+ + IPM G + SLNVSVA+ ++L E + Sbjct: 190 EGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISK 232 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 4/150 (2%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM--ASAAAGSNSWVQVK 74 + V ++QV P N+ AI+RTA A GV+ V S T A+AG+ + + Sbjct: 83 ENPFIVLLDQVQDPQNLGAIVRTAVAAGVNMVVLTKDNSAHVTPGSIKASAGTIFRIPIV 142 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + + LK +G+ I + E+ RP I+ G E +GI Q D Sbjct: 143 ITVNLARYIEKLKDKGVWIYGADMRGK--PLWEVKLERPLGIVFGNEGSGIRQLVKESCD 200 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 + + IPM + SLNVSV++ +++YE R+ Sbjct: 201 ELVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 8/173 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 N Y I + L R + L + ++++ P N+ AIIRTA GVH + + Sbjct: 126 FNKFAYRDIDDALRLADIRGEKPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAA 185 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A + G+ + + A+ LK +G + A + ++ E ++ Sbjct: 186 GITPTVAKVSEGAIFSIPCIMVTNLAAALKDLKQRGFWVYAADANGDS--CFEQEFGGSV 243 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E GI++ L +D + IPM+ SLNVSVA+ +++YE R+ Sbjct: 244 ALVLGNEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEIVRKNNR 296 >UniRef50_D1U4M7 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4M7_9DELT Length = 226 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 110/197 (55%), Gaps = 9/197 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ R RI ++LARRQ DLT+ M+ + PHNVSA++R+ DA GV +VH + S+ + Sbjct: 25 ISDKRKQRIDQVLARRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVSDVHLYYTTSQWPDL 84 Query: 61 ASAAAG-SNSWVQVKTHRTIGDAVAHL------KGQGMQILATHLSDNAVDFREIDYTRP 113 ++G + W+++ H V +L G QIL T S A + D+T P Sbjct: 85 GKKSSGSAMKWIRLIRHVDAATMVGNLVGGGGSAHDGGQILRTGFSATARPVMDFDFTIP 144 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 T I++ E G + E AL ++ IPM GMVQSLNVSVA+A+ILYEA QR+ AG+Y Sbjct: 145 TAIILSNEHRGTSPELAALVPDEVYIPMQGMVQSLNVSVAAAIILYEAFTQRKRAGLY-- 202 Query: 174 ENSMLPEAEQQRLLFEG 190 + + E L E Sbjct: 203 DAPSFSDEELAALRAEW 219 >UniRef50_C8WR00 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Bacillales RepID=C8WR00_ALIAD Length = 256 Score = 192 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 3/194 (1%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWV 71 +L RR + V ME V HN +AI+R+A+A GV V + G++ W+ Sbjct: 41 VLMRRTSYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGKQPFHPSKGVTQGAHKWL 100 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 ++ IG A+ L +G Q+ AT L + A +D RPT IL G EK G++ EA Sbjct: 101 TLQRMPDIGRAIDALHARGFQVYATDLGEGAQPIDAVDLARPTAILFGNEKDGVSPEARE 160 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFEGG 191 AD IPM G VQS NVSVA+A+ LYE R+ + + + L E+ +L Sbjct: 161 RADGRFYIPMAGFVQSFNVSVAAAIALYELTRRARET---VGDRYALGADERHKLYVTWC 217 Query: 192 YPVLAKVAKRKGLP 205 L + + Sbjct: 218 LRSLHGATREEARR 231 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 192 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 8/170 (4%) Query: 4 TRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 YA + +ML + + + ++ + PHN+ AIIRTA+ G H V + Sbjct: 98 YEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTANQAGAHGVIIPKRRAVGLT 157 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+A +AG+ ++ V + + LK +G+ + + + +++ P ++ Sbjct: 158 ATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADMDGD--VMYDVNMKGPIGLV 215 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +G E G+ + D IPM G + SLN SVA+ ++ YE RQR Sbjct: 216 IGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQRMQ 265 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 192 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 3/163 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASA 63 + A P L + ++ V P N+ A++R+AD GV V S Sbjct: 85 IEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADGAGVDGVLLPERRSAPLSAVAVKT 144 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ +++ + A+ LK Q + + + + D+T P+ +++G+E Sbjct: 145 SAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLD-ERGTMSYDAYDWTTPSVVVLGREGE 203 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+ D + IPM G V SLNVS A A++LYEA RQR+ Sbjct: 204 GLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEAARQRR 246 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 3/150 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGSRMRTMASAAAGSNSWVQVKTHRT 78 + ++Q+ PHN+ AIIR+A++ G V S + +AG+ + + + + Sbjct: 91 LIILDQIEDPHNLGAIIRSAESFGFDGVIIPERRSASVSPIVYKTSAGAINNINIIMVKN 150 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 A+ +K G + + + ++D C+++G E G+++ D I Sbjct: 151 TNRAIEEIKEAGFWVYGLA-GEASSPIDQVDLKGKVCLIVGNEGKGLSRLVRENCDILIN 209 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQNA 168 IPM G V SLN SVASA+ +YE RQ + Sbjct: 210 IPMKGFVNSLNASVASAIAMYEVLRQNGFS 239 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 5/168 (2%) Query: 3 PTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 P RY ++LA+ +P V ++ + PHN+ A+IRTA A G + + Sbjct: 77 PFRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALIRTAYAAGCDGIIIPERRAAQMTP 136 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 AAG+ ++ V + + K G+ + + +V + DY T +++ Sbjct: 137 AAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDGESV-YTTGDYQGGTVLVI 195 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G E G+ + D + +PM G V SLN SVA AL++YE RQR+ Sbjct: 196 GSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEVYRQRE 243 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 3/165 (1%) Query: 7 ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAA 64 + +LA+ L + ++ V PHN+ A +R ADA GV+ + S T+ A Sbjct: 84 QDLPALLAQHTAPLLLVLDGVTDPHNLGACLRCADAAGVNAIIIPRNRSAYLNATVKKVA 143 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFRE-IDYTRPTCILMGQEKT 123 +G+ + + + + L+ + IL T + ++ ++ +T P +++G E Sbjct: 144 SGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEADSHIYQTSFKFTSPIALVVGAEGN 203 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 GI + ++ + IPM+G V SLNVSVA + L+E RQR ++ Sbjct: 204 GIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFEVVRQRLSS 248 >UniRef50_B7DP24 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DP24_9BACL Length = 249 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 96/195 (49%), Gaps = 5/195 (2%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWV 71 +L RR + V ME V HN +AI+R+A+A GV V + + G++ W+ Sbjct: 37 VLMRRTGYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGKQPFQPSKGVTQGAHKWL 96 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + ++G A+ L +G Q+ AT L D A +D RPT IL G EK G++ EA Sbjct: 97 TIHRMPSVGRAIDALHARGFQVYATDLGDGAEPIDAVDLARPTAILFGNEKDGVSPEARE 156 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQ-RQNAGMYLRENSMLPEAEQQRLLFEG 190 AD IPM G VQS NVSVA+A+ LYE R+ R+ AG + L E+ RL Sbjct: 157 RADGRFYIPMAGFVQSFNVSVAAAIALYELTRRARETAG----DRYALDADERHRLYVTW 212 Query: 191 GYPVLAKVAKRKGLP 205 L + + Sbjct: 213 CLRSLHGATREEARR 227 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 3/150 (2%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTH 76 DL + ++ V PHN+ A +RTADA G + S T A A+G+ V V Sbjct: 102 DLVLVLDGVTDPHNLGACLRTADAAGAGAIVTPRHHSAALTPAAIKVASGAAETVPVVAV 161 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + +A LK GM + + + D +D PT I+MG E G+ + D Sbjct: 162 GNLARTLAALKDAGMWTVGLDGAAHE-DLYAVDLRPPTAIVMGAEGEGMRRLTREACDHL 220 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 IPM G V+SLNVSVA+ + L+EA+RQR+ Sbjct: 221 ARIPMGGTVESLNVSVATGITLFEARRQRR 250 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 3/149 (2%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTH 76 + ++ + P N+ A +R+A+A GVH V GS + +AG+ + +++ Sbjct: 98 GFILILDSIQDPRNLGACLRSANAAGVHCVVINKNGSAPINSLVHKTSAGALNQLKIFQV 157 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + + L+ + + ++ S N + +ID T P I+MG E +G+ + DQ Sbjct: 158 TNLSRTIKALQQKNIWVIGLDGSVN-ISIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQL 216 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQR 165 IPM G V+SLNVSVA+ + L+E RQR Sbjct: 217 AKIPMQGKVESLNVSVATGVTLFEVNRQR 245 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 10/185 (5%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAA 64 I A L + ++ + P N+ AIIR+A+A+G + P R ++A A Sbjct: 260 IDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALGAQGLIL--PQRRSAGLTGSVAKVA 317 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 AG+ + V + ++ LK +G ++ + + EI + P +++G E G Sbjct: 318 AGALEHLPVARVVNLNRSLEKLKDEGYTVVGLA-EEGSSTLSEIKFQGPLVVVVGSEDKG 376 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ---RQNAGMYLRENSMLPEA 181 I+ L DQ + IP+ G+ SLN SVA+++ LYE R R +G + P+ Sbjct: 377 ISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVARSKWMRSISGQDPSPRLLKPQI 436 Query: 182 EQQRL 186 +++ Sbjct: 437 SSEKI 441 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 4/166 (2%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---MRTMAS 62 + + + + + ++QV PHN+ A +RTA+A G V + + +A Sbjct: 83 FEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAEAAGCAAVIVLKDHAADVHSPVVAK 142 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 AA G+ S + V + + L+ QG + + + + + T ++MG E Sbjct: 143 AACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLA-GEAELSIYDAKLSGATAVVMGSED 201 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G+ + DQ I IPM G+V+SLNVSVA+ + L+E RQR A Sbjct: 202 KGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALFEINRQRVTA 247 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKT 75 P L ++ + P N+ I RTA+A GV + + + G+ + Sbjct: 126 PHLM-ILDNLQDPGNLGTIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVY 184 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + + + LK + ++ A HL + + DY + T L+G E G+ +E AD Sbjct: 185 VEDLRETIHTLKEKNIKSYAAHLDGKNT-YDKEDYRQGTAFLIGNEGNGLREEIAQCADT 243 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I IPM G V+SLN +VA+ ++++E RQR+ Sbjct: 244 WIRIPMCGQVESLNAAVAATVLMFEVSRQRR 274 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 5/164 (3%) Query: 4 TRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT-- 59 + + ++LA+ + + ++ + PHN A+IR+A A G V S T Sbjct: 75 QDFVSLAQLLAQSSQSERFFLILDGITDPHNFGALIRSAAAAGCQGVIFAKDRSCPVTGI 134 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + AAG+ +VQ+ +G A+ LK G+ + + E + P ++ G Sbjct: 135 VEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEG-QSLFEAPLSAPIALVAG 193 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 E GI L D I IPM G V+SLNVSVA+ + L+E R Sbjct: 194 SEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVR 237 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 12/172 (6%) Query: 7 ARICEMLARRQPDL---------TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 I ++ + + V ++ + P N IIRTADA G+ V + Sbjct: 95 QGILAVIKKNKYSFDKVITEGSSVVILDCLQDPGNAGTIIRTADAAGISAVLMSKGCVDL 154 Query: 58 R--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + + GS + + I + + LK +++A+HLS ++ + D T + Sbjct: 155 YSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDYKVIASHLSGK-NNYFQEDLTGRSA 213 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 I++G E GI+ E +AD + IPM G +SLN SVA+++++YE RQ+ + Sbjct: 214 IIVGNEANGISDETAYMADSLVKIPMPGKAESLNASVAASVMIYEIVRQKSH 265 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 7/172 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P + + E L + +P + ++ V P N +I R ADA GVH + S Sbjct: 76 IKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADAAGVHAIIYQKKRSV 135 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + ++ A+AG+ V + I A+ LK + I V F E D+T+P Sbjct: 136 GIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDV-FWESDFTQPL 194 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E GI Q +AL D+ I IPM G + SLNVSVASALI +E RQR+ Sbjct: 195 GLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQRK 246 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 3/160 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + +L L + +++V PHN+ AI+RTADA GV V S T+ A Sbjct: 83 DLKALLEAESNPLFLFLDEVQDPHNLGAILRTADATGVTAVVIPKHNSVGVNATVRKVAC 142 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V+V + + L+ G+ + + ++D+ ++MG E +G+ Sbjct: 143 GAAETVKVVVVSNLVRTIKELQQAGLWVTGLA-GETNTTLYQLDFKGAVGLVMGAEGSGL 201 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D IPM G ++SLNVSVA+ ++LYE RQR Sbjct: 202 RKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQR 241 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 5/165 (3%) Query: 5 RYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 +Y + +++ +P L + ++ V P N+ A R ADA+GV + + T+ Sbjct: 82 KYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVADAMGVDALICPKDNAVGLNATV 141 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G V + + +LK + + T + N ++ ++ ++MG Sbjct: 142 RKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNAN-KSLQKTNFKGSIALVMGS 200 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E G+ + L D IPM+G V+SLNVSVAS + LYE RQR Sbjct: 201 EGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 9/169 (5%) Query: 3 PTRYARICEMLARR------QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 P A + E+ + + + ++++ P N+ +IRTADA+G V + + Sbjct: 89 PQSVAALVELRREELAAFAPERGMVLVLDRIRDPGNLGTLIRTADALGAAGVVLLENTAD 148 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + + + GS + V T G+ + G + AT L + A D + + T Sbjct: 149 LYNPKVVRSTMGSLFHLPVFTGVKTGELEEWCRQHGYALWATAL-EGAEDMTRLTWPEKT 207 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E G++ E LA ADQ + IPM G +SLNV+VA ++++EA R Sbjct: 208 ALVLGSEAEGVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAAR 256 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWVQVKT 75 P L + ++ + PHN+ A++R+A A GV V S T+ AAAG+ + + + Sbjct: 145 PPLLLVLDSLQDPHNLGAVLRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICR 204 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 + A+ LK G I + + + E D+T PTC+++G E+ GI D Sbjct: 205 TTNLAGALGTLKKHGFWIYGAS-GEASGNLYETDFTGPTCLVLGNEQKGIRPLLKKHCDF 263 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + IP+ V+SLNVSVA+ ++L E +R++ Sbjct: 264 LLAIPLAAGVESLNVSVAAGIMLAEIRRRQHF 295 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 7/169 (4%) Query: 1 MNPTRYARICEMLARRQPD----LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + +++ + + ++ + PHN+ A+IRTA G V + Sbjct: 74 VAPFSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAACAGASGVVIPRDRAC 133 Query: 57 MRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T A A+AG+ + V I ++ LK G + +A E+ ++ Sbjct: 134 AITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEADA-SLYEVAFSGKI 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E GI D + IP+ G V SLN SVA + LYE R Sbjct: 193 ALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVAR 241 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 7/168 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---- 56 + Y I +++ + P + ++ +H PHN AIIRTA+A G+ H + P R Sbjct: 67 LKDFNYYEI-DVIKKDNPKTVLILDHIHDPHNFGAIIRTANAAGIK--HIIIPKDRSTDV 123 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ ++G V++ I ++ LK G I ++ L +NAV + ++ Y + Sbjct: 124 TSTVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVPYNKVQYAGNCAL 183 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++G E+ GI++ + D + IP G VQS+NVSVA+ ++L+E + Sbjct: 184 VVGNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFELVNR 231 >UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSD9_9SPHI Length = 234 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 11/205 (5%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSN 68 + ++LA+R TV +E ++KPHN SA++RT D G+ +VH + + G++ Sbjct: 29 MEKVLAQRTRHFTVVLENIYKPHNASAVLRTCDCFGIQDVHIIEKTREYKVNPFVTRGAS 88 Query: 69 SWVQVKTH-------RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 W+ + + + + + LK G +I T +++D ++ G E Sbjct: 89 QWLTLHKYFQPEEPENAVINCFSSLKSNGFKIYGTSPDPQTRPIQDLDPNEKIALVFGNE 148 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181 GI+ E AD + IPM G +S N+SVA++L L Q A Y+ + L E Sbjct: 149 HEGISNEVKNAADGLVHIPMRGFTESFNISVAASLFLQNLV---QKASDYVIPDYNLTEV 205 Query: 182 EQQRLLFEGGYPVLAKVAKRKGLPY 206 E+Q L Y + K + Y Sbjct: 206 EKQELRLTW-YRSIVKNSDIHEKKY 229 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 3/162 (1%) Query: 7 ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAA 64 + ++L L + ++QV PHN+ A IRTA A+G+ V S T A Sbjct: 85 KDLDQLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIAAVIVPRDRSASLTPTARKVA 144 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGM-QILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 AG V+ + +AH+K +++ T L + A+ ++ D++ I+MG E T Sbjct: 145 AGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKALPIQKYDFSGNVAIVMGAEDT 204 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G+ + DQ + IPM G +QSLNVSVA+ + LYEA RQR Sbjct: 205 GLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQR 246 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 7/160 (4%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAA 64 I + + L + +E + PHN+ AI+R+A+A+G H + P R ++A A Sbjct: 274 IEDCCHLGENPLLMAVEGLTDPHNLGAIVRSAEALGAHGLIL--PQRRNAGLTGSVAKVA 331 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 AG+ + V + ++ LK +G +I+ ++ V E D P I+ G E G Sbjct: 332 AGALEHLPVARVVNLNRSLDILKDKGYRIVGLA-TEGDVSLTEADLNGPLVIVTGSEGNG 390 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++ DQ I IP+ G SLN SVASAL+LYE R+ Sbjct: 391 LSLLTRRYCDQLIRIPLRGATPSLNASVASALMLYEVARR 430 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 3/156 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMAS 62 + E LA + L + ++++ P N AIIR+A+ V + S T+ Sbjct: 74 DFDEAYEELAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVK 133 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + G+ +V + + D + LK + + ++++ E +Y+ +++G E Sbjct: 134 TSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAA-GEASINYNEENYSNKIILVLGNEG 192 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 +GI ++ D+ I IPM G + SLNVSVAS ++L Sbjct: 193 SGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILL 228 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 + + + L + ++++ P N+ I+RTA+A + V + + A G Sbjct: 113 VDQKREEQGSLLLLFLDEIQDPGNLGTILRTAEAAAIDGVVLGSGSVDIYNGKVVRATMG 172 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V T +++ D K +G ++L + L N+V + E DY T +++G E G++ Sbjct: 173 ALFRIPVFT-QSLVDTADEWKAKGGRVLISSLEQNSVSYDEADYAGLTALVIGNEGRGVS 231 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +E A ADQ + IP+ G +SLN +VA+ + +YEAQR+R+ Sbjct: 232 KEMFAKADQFVHIPLYGGAESLNAAVAAGIFVYEAQRKRR 271 >UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPX8_9FIRM Length = 271 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 5/168 (2%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TM 60 P + + AR+ L V ++ V P N IIRTADAVG V + Sbjct: 107 PQMAEHLQQAAARK--PLLVVLDGVQDPGNAGTIIRTADAVGADGVILTKGSVDVFSDKT 164 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS + V T + + + G Q+LAT L + A +D+ + + I G Sbjct: 165 VRATMGSLFHLPVVTDVSAEEVATFAQAAGCQLLATALDEQAKPHFAVDFGKGSLIAFGN 224 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 E G+++E LA A + + IPM G +SLNV V+SA++LYEA RQR A Sbjct: 225 EGGGVSEELLAAA-EKVYIPMYGEAESLNVGVSSAVVLYEAVRQRHFA 271 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 4/171 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 + LA L + ++ + PHNV AI+R+AD V V T+ +AG Sbjct: 121 LLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETITRVSAG 180 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + +WV + R + LK G + ++ A+ R + T +++G E G++ Sbjct: 181 AVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEAIGART--FPPKTALVLGNEGHGVS 238 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 D I IP G V SLNVSVA+ ++LYE +R +Q+ R+N M Sbjct: 239 PLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQSPYSVQRQNEM 289 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 2 NPTRYARICEMLAR------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 P + E L R R L V ++ V P NV IIR+ADAVG V Sbjct: 92 TPPPVFAVLEKLKRDDTALFRNNSLVVVLDGVRDPGNVGTIIRSADAVGADAVVLGKGSV 151 Query: 56 RMRTMASAA--AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + GS + + + + + + +G++++ T L + D+T Sbjct: 152 DLYNPKTVRSTMGSLFHLPIIE-ADLAELLPEAQSKGIKLVGTSLQATHTCYT-YDWTAG 209 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 T +LMG E G++ D+ +IIPM G +SLNV++A+ ++LYEA RQR+ + Sbjct: 210 TWLLMGNESEGLSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQRKYS 264 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 3/156 (1%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNS 69 + + L V ++ + N AI RT + G + S +AG+ Sbjct: 90 LFEEGKTPLFVMLDGITDVRNFGAIARTCECAGADAIIIPSKNSVSVNADAMKTSAGALH 149 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 + V + + + + +LK G +I+A D+ + +Y P CI+MG E TG+ E Sbjct: 150 TLPVCREQNLTNTIKYLKDCGFKIVAAT-EKGDYDYTKANYKDPVCIIMGAEDTGVPYEH 208 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 L+L D+ I IP++G ++SLNVSVA+ +++YEA +QR Sbjct: 209 LSLCDEWIKIPLMGKIESLNVSVAAGILIYEAVKQR 244 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 11/182 (6%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P Y + +++A+ + + V + + PHN+ AIIRTA+A+G H + V P R Sbjct: 313 VAPYPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEALGAHGL--VIPQRR 370 Query: 57 MRTMASAAAGS----NSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + +A A V + A+ LK G I + E ++ Sbjct: 371 AVGVTAAVAKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAA-GEAKQSIHETSFSG 429 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 P +++G E G++ D I IP+ G SLN SVA+ ++LYE RQRQ +L Sbjct: 430 PVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYEVSRQRQQLTHHL 489 Query: 173 RE 174 Sbjct: 490 EG 491 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 6/169 (3%) Query: 2 NPTRYARICEMLARR---QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 NP I +M ++ Q D + ++V P N+ IIRTA A GV+ + + Sbjct: 91 NPQGIIAIVKMNNKKLDFQGDFYLFCDKVQDPGNLGTIIRTAHAAGVNGIVLSKGTVDIY 150 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + GS ++ + + LK G ++ T L +++ DF + D + Sbjct: 151 NEKTIRSTMGSLFYMPIYYDDDEFSLIKSLKKDGFTLIVTSL-ESSKDFFKEDLKGKIIL 209 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G++ E L LAD+ + IPM G +SLNV++A+++I+YE RQ Sbjct: 210 TVGNEGNGVSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQN 258 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 7/152 (4%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQV 73 + + + + + P N+ IIRTADA G + + + + A+ GS + V Sbjct: 103 KDKGIYIIADNIQDPGNLGTIIRTADAFGASAIFTINNCVDVFNPKVLRASMGSIFHIPV 162 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 T + LK +G+++ ATHL + E + + ++G E G++ + L Sbjct: 163 IV--TASQILLKLKQRGIKVFATHLKARKL-VHECNISDKVAFVLGNEAKGVS--VVDLV 217 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + IPM G +SLNVS+A+ + LYE+QRQR Sbjct: 218 DDFVKIPMTGEAESLNVSIAAGIFLYESQRQR 249 >UniRef50_A9S3U1 Predicted protein (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S3U1_PHYPA Length = 241 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 5/193 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMR 58 + R RI E++A R + + +E + NVSA+ R+ADA+G VH + R + Sbjct: 34 LGDERKQRIEEVVANRTYSICIAVEGLLDLGNVSAVCRSADALGFQSVHVISNETKKRYK 93 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + G+ W+ + D + L+ +G +I TH++ + V ++D+T PT + Sbjct: 94 KNRKVSMGTEKWLDAELWSNTSDCIDTLRQRGYRIAVTHIAPDTVSIYDMDWTIPTAVFF 153 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E G ++EA+ +D IPM GMV+S N+SVA+ +I++ A R R + + + Sbjct: 154 GNEFMGASEEAIKQSDVRCCIPMAGMVESFNISVAAGIIMHHAARDR---IIRSGVHGDI 210 Query: 179 PEAEQQRLLFEGG 191 +++ L E Sbjct: 211 SPEDRRILEAEFC 223 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 3/168 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--R 58 P + + QP + M++++ P N A++RTA GV+ V S Sbjct: 76 FKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAGVNGVIMPDKRSSPLSP 135 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++ A+AG+ + V + ++ +LK QG+ + E D T P +++ Sbjct: 136 AVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASGT-VWEADLTGPAAVVV 194 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G E G+ DQ + IP G + SLN SVA AL +YE RQR+ Sbjct: 195 GNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMRQRR 242 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 3/155 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWV 71 + + DL + +E + P N+ + RTA+A GV+ + + + GS + Sbjct: 101 EKPKGDLFLILENIQDPGNLGTLFRTAEAAGVNHIFLSRNTVDPFSPKVVRSTMGSLFRL 160 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + LK G+Q+ A L F+ + P+ L G E G+T+E Sbjct: 161 PFSIEEDLFFLCESLKSAGVQVFALDLDGKKTHFQAA-FQGPSAFLFGNEGNGLTKELSQ 219 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 A + ++IPM G ++SLNV+ +++++LYEA RQR+ Sbjct: 220 CATEKLLIPMEGKIESLNVATSASIVLYEAVRQRR 254 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 3/148 (2%) Query: 20 LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQVKTHR 77 L + ++ V PHN+ A +R+A A GV V S T+ ++G+ + V Sbjct: 100 LLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVV 159 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + ++ L+ Q + I + +D +++G E G+ + D Sbjct: 160 NLARSLRELQKQDVWIYGLA-GEVETSLYALDLRGNVALVLGGEADGLRRLTREHCDVLA 218 Query: 138 IIPMIGMVQSLNVSVASALILYEAQRQR 165 IPM G V+SLNVSVA+ + L+EA RQR Sbjct: 219 RIPMPGEVESLNVSVAAGVTLFEAVRQR 246 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 10/170 (5%) Query: 1 MNPTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 ++P Y + ++ + R+ + ++ V P N+ AI+R+A+ G V V P R Sbjct: 63 ISPIEYKEVDTIIDKCIREGSFILFLDSVEDPQNMGAIMRSAEFFGCAGV--VIPKRRCV 120 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ + + + + + LK G+ ++ L R +D + P Sbjct: 121 QVNETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLDGE--PLRNVDLSPPL 178 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 I++G E G+++ D I G + SLN+SVA A+I+YE +R+ Sbjct: 179 AIVVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 6/163 (3%) Query: 6 YARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--SRMRTM 60 Y + E + + + V ++Q+ P N AIIR+A+ GV + T+ Sbjct: 83 YLELTEFFEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECFGVDGIVIQDRNNVKVTETV 142 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++ G+ V + I D + K G ++ +D + E Y + C+++G Sbjct: 143 VKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKVYGAE-ADGENLYYEESYPKKVCLVLGS 201 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 E G+ ++ D+ + I + G SLNVSVA +IL E + Sbjct: 202 EGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAEMSK 244 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAA 65 + E++ Q L + +E + P N+ ++RT + G+ V + + Sbjct: 122 ALEELIKGEQTHL-LILESIQDPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKTIRSTM 180 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 GS V + + ++ LK Q + + A HL + + E DY + T L+G E G+ Sbjct: 181 GSIYRVPFFITKDLAGTISSLKEQQVNVYAAHL-KGTLSYDEPDYKKKTAFLIGNEGNGL 239 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + E LAD I IPM G V+SLN +++++L++YE RQR++ Sbjct: 240 SDEIADLADTYIKIPMQGQVESLNAAISASLLMYETGRQRRH 281 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 7/153 (4%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAGSNSWVQ 72 +P L + ++ + PHN+ A++R+A+A+G H + V P R + A AAG+ + Sbjct: 381 EPPLLLALDGITDPHNLGAVVRSAEAMGAHGL--VLPQRRSAGLTGSAAKVAAGAMEHLP 438 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 V + ++ LK G +++ ++ V ++D P ++ G E G++ Sbjct: 439 VARVVNLNRSLEKLKDSGYRVIGLA-AEGDVTLMDVDLEGPLVLVTGSEDQGLSLLTRRH 497 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 DQ + IP+ G+ SLN SVA+AL +YE R+ Sbjct: 498 CDQLVRIPLRGITPSLNASVATALCVYEVARRN 530 >UniRef50_A7HIF7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter RepID=A7HIF7_ANADF Length = 239 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 1/206 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW-PGSRMRT 59 + P R ARI ++A R LTV ME P NV+A++RT +A G+ E+H + P Sbjct: 26 LVPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGIQELHVIEGPMKPYDR 85 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + ++ WV V+ + G+ +AHLK +G I ATHL + A + + ++ G Sbjct: 86 NKKISQNADKWVDVRRWSSTGECLAHLKAEGFAIYATHLGEGARTLDALSFAGKVALVFG 145 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G++ EA+AL+D +IPM G VQSLNVSVA+A+ + +A +R + S L Sbjct: 146 NEHRGVSDEAVALSDAVYVIPMHGFVQSLNVSVAAAISIAKAVERRAAERGRHGDLSELE 205 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLP 205 A + + A++AK + + Sbjct: 206 AAALRERFYVLAVKQRARIAKAERVD 231 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 10/174 (5%) Query: 2 NPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + Y + + LA R +P + ++ + P NV ++RTA+ VGVH V V PG R Sbjct: 76 SDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVGVHGV--VIPGRRA 133 Query: 57 ---MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + ++G+ ++V + + ++ G+ ++ + A ++ +D P Sbjct: 134 AEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLP 193 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E G+ + D + +PM G + SLNV+VA +++LY A R R+ Sbjct: 194 LALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAWRVREQ 247 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ + I ++L + + ++++ N AI RTA+ VGVH + G+ Sbjct: 91 ISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECVGVHAIILPEKGAA 150 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ +++ + + AV L+ G+Q+ + + ++D+T+P Sbjct: 151 PINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQKL-IYDVDFTQPC 209 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+MG E+TGI++E L +D+ I +P+ G QSLNVSVA ILYEA RQ+ Sbjct: 210 AIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAVRQK 260 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 3/160 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAA 65 I ++ + + + ++ V PHN A IR+A + G+ + S T+ A Sbjct: 86 DIENLIPQDKNAFILILDNVQDPHNFGACIRSAHSAGIDFIIIPKDNSAPVNATVKKVAC 145 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ ++ + A+ LK G+ I+ N ++ I+ G E +G+ Sbjct: 146 GAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAGEAND-SLYSMNLADSVAIVAGAEGSGM 204 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 Q A D +PM+G V SLNVSVA+ + LYE RQR Sbjct: 205 RQRTKASCDFLAKLPMLGEVSSLNVSVATGIALYETVRQR 244 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 6/167 (3%) Query: 2 NPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 + Y+ I ++LA R D + ++ + P N ++RTA+ G+ V S Sbjct: 94 SEFSYSSIEDLLASGELRGKD-ILMLDSLQDPQNFGTLLRTAEVFGIGAVIIPEHRSVEV 152 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + +A++G+ + + + + LK G +L +++ ++D P C+ Sbjct: 153 TPAVVNASSGATEHLNISKVTNLARTASKLKEYGYWVLGLEYDESSSVIWDVDLRIPICL 212 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++G E +GI + D + IP G + SLN +VA ++ LYE + Sbjct: 213 VVGSEGSGIRELVRKRCDLLVKIPQAGRIGSLNAAVAGSIALYEIYK 259 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 9/173 (5%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P Y +I +++ + + L + ++ V N+ AI RTA+ GVH + GS Sbjct: 86 ISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSGVHAIIVPKKGSA 145 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQ-ILATHLSDNAVDFREIDYTRP 113 +AG+ + V H +G L G+Q +++T ++ + +DYT P Sbjct: 146 EINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTEKTEES--IYSVDYTAP 203 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 TCI+MG E G++ + + ++D IPM G + SLNVSV++ ++LYEA RQRQ Sbjct: 204 TCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIRQRQ 256 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ + P N+ I R+A+A G+ V + + G+ V Sbjct: 122 YLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDD 181 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + LK +G+ I HL + ++ L+G E G+++ AD+ + Sbjct: 182 LIYTIDALKRKGVLIYGAHLDGEE--LYDTEFPDKIAFLIGNEGNGLSKAVSDTADRLLR 239 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQNA 168 IPM G V+SLN ++++ L+ YEA RQR++A Sbjct: 240 IPMEGKVESLNAAISATLLSYEAMRQRRSA 269 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 4/159 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAG 66 I +M + L V ++ + PHN AIIR+A G V S M ++AG Sbjct: 86 IEKMNEKVTKPLVVILDNITDPHNAGAIIRSAYCAGADGVIMQTRRSASIGEGMYKSSAG 145 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + + I + LK +G+ ++ ++ ++ ++DY P +++G E G+ Sbjct: 146 AIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDMNGE--NYYDMDYDMPLALVVGAEGKGLG 203 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D IP+ SLN SVA+ ++L+EA + R Sbjct: 204 RLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFEAVKTR 242 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAG 66 + AR + L V ++ + P N AIIR+A+ +G H V S + AAG Sbjct: 78 LDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAHGVVVEERRSAPLSPVVVKTAAG 137 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + S++ V + + + LK G+ I + A D D + +++G E G+ Sbjct: 138 ATSYLPVAQTKNLPRLIDALKEDGVWIYGAA-GEAAQDIGRTDLSGKVALVIGAEGEGLR 196 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D + IP G VQSLN SVA+ ++LYEA R R Sbjct: 197 RLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 9/170 (5%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P RYA + E+LA P L V ++++ P N+ AI RTA+ G + V P R + Sbjct: 90 VAPFRYAYVDELLAVEHP-LIVALDEIQDPQNLGAIARTAECAGATGL--VIPARRSADV 146 Query: 61 A----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP-TC 115 A+AG+ + + R + D + +G G + D V + +DY+ P Sbjct: 147 TPAVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYGAE-GDGGVPYTGVDYSGPGVV 205 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E G+ A D I +P+ G + SLNVS A++ +LYE RQR Sbjct: 206 LVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQR 255 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 182 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 1 MNPTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 ++P Y E+ + + V ++ + P NV +I RT + G + + P R Sbjct: 77 LSPITYVPEEELFRKTIEEKGFFVVLDHITDPQNVGSIARTVEVFG--GIGLLIPKDRSA 134 Query: 59 T----MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + +++G+ +++ +I A+ K G + A D ++D+ P Sbjct: 135 PINAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYALE--KGGKDITKVDFAYPM 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 CI++G E G+++ L +D + IPM G V SLNVS A A+ L+E + ++N G Sbjct: 193 CIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQENTG 247 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 182 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAG 66 I ++ R + + ++++ N AI RTA+ G+ + G+ ++G Sbjct: 109 IADVFERGEVPFFLLLDRITDVRNFGAIARTAECTGIQCIVIPGRGAAAINSDAMKTSSG 168 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFRE--IDYTRPTCILMGQEKTG 124 + + + V + + V +L+ G+ ++A +A D E D T P I+MG E+ G Sbjct: 169 ALNHISVCREPDLTETVKYLQESGITVVACT-EKSARDLYERTTDLTGPMAIIMGSEEDG 227 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+ E L + D + IP++G V SLNVSVA+ +ILYEA RQR Sbjct: 228 ISPELLRMVDTHVKIPLLGAVGSLNVSVATGVILYEAVRQR 268 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 7/171 (4%) Query: 4 TRYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 YA + ++LAR +P + +++V PHN+ AI+R+A+AVG H V Sbjct: 75 REYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAVGAHGVIIPRRRGVGLT 134 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 +A AA G+ +V V + + LKG+G+ + D + D+T P ++ Sbjct: 135 AAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAA-GDAGQEAFNADFTVPLVLV 193 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 +G E G++ + D + +PM G + SLNV+ A+ +++YE RQR A Sbjct: 194 LGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVLRQRGQA 244 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 5/163 (3%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TMAS 62 +Y + +++ + L + +E + P N+ IIR+ADA G V + + Sbjct: 92 KYYAVEDII--KNSGLFILLENIQDPGNLGTIIRSADAFGAKAVFVSKGSADIYSDKTIR 149 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A GS + + I + + +K + + + A L +I + + ++G E Sbjct: 150 ATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGE-KYLNDIKFPNKSAFVIGNEA 208 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G+ E AD + I M G +SLN + A+++I+YEA + R Sbjct: 209 NGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAAKNR 251 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 3/160 (1%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--SRMRTMASAAAGSN 68 + +A + L + ++ + PHN+ A +R+A A GVH V + A G+ Sbjct: 85 DAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLIPNSRAADVTPVVEKVACGAT 144 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + + + V ++ QG+ ++ A D T P +++G E GI Sbjct: 145 EILPLFRVSNLRREVERMQRQGIWVVGGA-GGAAQSLYATDLTVPLAVIVGNEGEGIRHG 203 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 D + IPM ++SLNVSVA ++L+EA+RQR + Sbjct: 204 LREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQRLFS 243 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 7/160 (4%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAA 64 + + + + + V + + PHN+ AIIR+A+A+G + V P R T+A + Sbjct: 180 VQQAKNKARRPVIVAADGITDPHNLGAIIRSAEAIGAQGI--VIPQRRAVGVTSTVAKVS 237 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 AG+ + + +G A+ +LK I ++ A D++ P +++G E +G Sbjct: 238 AGALENIPIARVINLGRALEYLKSNSFWIYGLT-AEAAQSIHTTDFSAPVVLVVGAEGSG 296 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++ L DQ + I + G SLN SVA+ + LYE RQ Sbjct: 297 LSLSVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYRQ 336 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + +E P N+ I+RTA+A GV V + + + GS + Sbjct: 138 LLVLEDTADPGNLGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVED 197 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + LK G+ ATHL +++I Y+ + I++G E G++ E LAD ++ Sbjct: 198 LKETIKELKKSGISFYATHLKGE-KSYKDIKYSGRSAIIVGNEARGLSDEVADLADTYVL 256 Query: 139 IPMIGMVQSLNVSVASALILYEA 161 IPM G V+SLN +VA+AL++YE Sbjct: 257 IPMQGKVESLNAAVAAALMMYEV 279 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 16/176 (9%) Query: 3 PTRYARICEMLARRQP---------DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 P RY + ML+ P + + +++V P N A++R+A A G V P Sbjct: 80 PIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAMLRSAVAAGTDGVIV--P 137 Query: 54 GSRMRTMA----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREID 109 M + A+AG+ + + + + LK +G + + + D Sbjct: 138 TREMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYGAEGTAE-TPLWDAD 196 Query: 110 YTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + RP +++G E G+ E D+ + IPM G +SLNVSVA+ L+++EA R R Sbjct: 197 WDRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGLLVFEAARSR 252 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--SRMRTMA 61 T +++ ++ L + ++++ P N AIIRTA+ GV + S + Sbjct: 75 TSLESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDAIIYKKHHQASINDLVI 134 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 + G+ +++ + + + + +L+ +G + AT L + + ++DY T ++G E Sbjct: 135 KTSMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLL-KSQPYEKVDYANKTVFIVGNE 193 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 G++ L ADQ I I M G VQSLNV VA+ +IL + Sbjct: 194 NKGVSPLILKNADQSIRIDMFGDVQSLNVGVATGIILAHYR 234 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 3/157 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWV 71 A +Q L V ++ V N AI+R+A+ VG V + +AG+ + Sbjct: 216 AHKQASLVVLLDHVVDEGNFGAIVRSAEVVGASCVIIANARCASVGVGAYKTSAGAVLHM 275 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + + A+ LK G ++ + +T C++MG E+ GI+ Sbjct: 276 PIVQVVNLARAIDELKEHGFWVIGASEHAQQT-VWDAPFTGKVCLIMGSEENGISSLVQK 334 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 D +P G ++SLNV+ A+ ++ YE RQ + + Sbjct: 335 KCDFICKLPQRGRIESLNVAQAATVMCYEWMRQNKLS 371 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 7/173 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P + ++ + + L + ++ V N+ AI+RTA VG H + GS Sbjct: 74 LSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGAHALVLPKQGSA 133 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + + + + ++ +L+ G+Q++A H ++ T PT Sbjct: 134 SLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACH-EKTQTSIYQVKLTVPT 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IL+G E GI + L D IPM+G + SLNVSVA+A+ILYE+ RQR N Sbjct: 193 AILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFRQRNN 245 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAG 66 + +++ Q L V ++ V P N+ IIR+ADA G V + + A G Sbjct: 106 LEDIIRPDQKPLVVIVDGVQDPGNLGTIIRSADAAGASGVILLKGTVDIYNPKTLRATMG 165 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 S + V + +A+ +L G+ +L + + + + P I++ E G Sbjct: 166 SLFHLPVIQVSDVNEALEYLASIGVTLLVGEPAGG-IPVFKANLQTPVGIIVANEGAGPR 224 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +E Q I IPM G +SLNV++A+++ILYEA RQR Sbjct: 225 EEIFRYNHQKITIPMPGCAESLNVAIATSIILYEAIRQRHK 265 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 5/163 (3%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--S 62 + + I +ML L + +E + P N+ I+R + GV V + Sbjct: 118 KDSSISDMLT--DNPLLILVENLQDPGNLGTILRMGEGAGVTGVIMSSNTVDIYNPKTIR 175 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + GS V + DAV+ K G+++ A HL E DY T L+G E Sbjct: 176 STMGSIFRVPFVYVQDFSDAVSQCKNAGIKVYAAHLDGKNTYLGE-DYREGTAFLIGNEG 234 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G+T++ AD I IPM G V+SLN ++A ++ YEA RQR Sbjct: 235 NGLTEDITKQADTLIRIPMQGEVESLNAAIACTILTYEAVRQR 277 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 10/165 (6%) Query: 3 PTR-YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA 61 P R + I + L + + V ++ + PHN+ AI RT++ G + V P +R + Sbjct: 77 PYREWEDIEKTLNNK--SVIVVLDHIQDPHNLGAIARTSEFAGASAI--VIPKARSAGVT 132 Query: 62 ----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 A+AG+ S++ V I + + LK +G I+ L + + +++Y P ++ Sbjct: 133 SASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTENL-YNQVNYRFPLALV 191 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 +G E G+ + D + IP G V+SLNVSVA +ILY+ + Sbjct: 192 VGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIILYKIR 236 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 8/173 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ +A + E+L P L V + + P N+ AI+RTA+A GV AV P R + Sbjct: 81 VSVKDFATVEELLGTENP-LIVVLNAIQDPRNLGAILRTAEAAGVDG--AVVPSRRAAPL 137 Query: 61 A----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 AAG+ ++ V I + K +G+ ++ D V + + D P + Sbjct: 138 TPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADP-DGPVSYWDADLGGPLAL 196 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 ++G E G+ + A D + IPM G V SLN SVA+AL++YEA RQR+ G Sbjct: 197 VIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEAVRQRRAGG 249 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 3/171 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--S 62 A + + + + + PHN+ A+ RTA GVH + + T A Sbjct: 87 PLADLLAAVPSTDTPFILVADGLTDPHNLGALARTALCAGVHGLIIPKDNAASPTPAAVK 146 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A+AG+ ++ V I + LK G+ I + D T P +++G E Sbjct: 147 ASAGALEFLPVARETNIARVLDALKDAGLWIAGLD-GRGEQTIYDSDLTGPLALVVGDEG 205 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 GI + D + IP MV SLN SVA A+ +YEA RQR+ + R Sbjct: 206 RGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAMYEAFRQRRAKAVIGR 256 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 3/166 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--SRMR 58 M YA + + P L V ++ + N+ AIIR A+A+G + G Sbjct: 103 MPEFPYADFEGLFQAQLPALLVILDGIQDSFNLGAIIRCAEALGAGGIVLPEKGQSGVNS 162 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A ++AG+ +++ + + A+ LK +GM+ILA + + P C+++ Sbjct: 163 QAARSSAGAVNFLPIYRVPALDRAIDQLKSRGMKILAAT-EKSEQSLWNVVIPAPLCLII 221 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 G E G++ L+ D + IPM G SLN +VA+ ++L E QRQ Sbjct: 222 GNEGKGVSSALLSACDIQVRIPMAGQTSSLNAAVAAGILLAEIQRQ 267 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 4/164 (2%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA--A 65 I E+ + +L + +E + P N+ ++RT + GV + + + Sbjct: 101 EIDELFKGDKTEL-LVLESIQDPGNLGTMVRTGEGAGVSGIIMNRTTVDIFNPKTVRSTM 159 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 GS V + + + + K +G+ + A HL + DYT ++G E G+ Sbjct: 160 GSLYRVPFYITDDLPETIEYAKSKGVSLYAAHLKGK-CSYDRPDYTGACGFMIGNEGNGL 218 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 + E +AD I IPM G V+SLN ++++ L++YE RQR+ G Sbjct: 219 SDEIADMADTYIRIPMEGAVESLNAAISATLLMYECNRQRRLLG 262 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 179 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEM----LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ +A + + + L V +++V N A+ R+A+ +GV + G+ Sbjct: 93 LSAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARSAECLGVDAMIVPSRGAA 152 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + V + D V +LK G++I+A +++ + D T P Sbjct: 153 QLNSDAVKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIACS-EKASINVYDEDLTDPC 211 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ILMG E+ GI+ + L AD + IPM G + SLNVSVA+ +IL E RQR Sbjct: 212 VILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMILSEVTRQR 262 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEMLARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGS 55 ++P +Y + +++ R + L V ++ + PHN+ AIIR A G V Sbjct: 81 VSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAIIRNCVAFGADGVIIPKWRAAG 140 Query: 56 RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T++ ++AG+ + + A+ LK I+ +ID P Sbjct: 141 VNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVGAENGGRI--LEKIDLPFPLA 198 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E G+ +D I IP ++ SLN S ASA+ILYE ++R+ Sbjct: 199 VIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAVILYEIAKKRK 249 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 4/163 (2%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASA 63 + + L + + E + KP N+ I+R +DAVG+ + + + + A Sbjct: 114 LEDLGKQLKNQNNPFLIVAEAIEKPGNLGTILRCSDAVGLDALIVCDACTDIHNPNVVRA 173 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 + G+ V V + + + LK +G+ ILA + +ID T P I +G E+ Sbjct: 174 SVGTLFTVPVIESQG-AETLQWLKQKGISILAATPHAK-QELADIDLTGPLAIAVGTEQL 231 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G++ + + AD + IPM G+ SLNV++A+ ++LYEA RQR+ Sbjct: 232 GLSPQWMEQADIQVRIPMYGIADSLNVAMATTILLYEALRQRK 274 >UniRef50_Q112U6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Oscillatoriales RepID=Q112U6_TRIEI Length = 234 Score = 179 bits (454), Expect = 8e-44, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 9/201 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R +I +L +R D+TV +E +++PHN SA++R+ D+ GV +VH V + Sbjct: 17 ITPARREKILSVLQQRTRDITVILEDIYQPHNASAVLRSCDSFGVQDVHIVENKNIFTIT 76 Query: 61 ASAAAGSNSWVQVKTHR-----TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 S GS+ W+ + + + + LK +G I AT + E+ Sbjct: 77 QSVTIGSDRWLTLYRYNEQSINNTEECLKRLKNEGYVIAATTPYKEHITIEELSVNTKVA 136 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREN 175 ++ G E G+++ A AD + IPM+G +S N+SV++AL LY + + N Sbjct: 137 LMFGSEINGLSEYAKNNADVSVKIPMVGFSESFNISVSAALCLYNLMSRLKKEH----NN 192 Query: 176 SMLPEAEQQRLLFEGGYPVLA 196 L E E+ L + Sbjct: 193 WKLTETEKLDLELNWLQKSIK 213 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 5/168 (2%) Query: 9 ICEMLARRQP--DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAA 64 + L + L + ++ + PHN+ A IR+ADA GVH + S T+ A Sbjct: 85 LLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADAAGVHMIIVPRDRSANVNATVRKVA 144 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 +GS+ V + + LK + I+ + L N + P ++MG E +G Sbjct: 145 SGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRSNQI-LFNTRLIDPIALVMGSESSG 203 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 I + D+ + IP + SLNVSVA+ + L+E RQR+ ++ Sbjct: 204 IRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFETVRQRKYQNGFI 251 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 2/161 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASA 63 + + + R + + + + PHN+ AI+R+A A G V S T A + Sbjct: 131 LQKFKDAVDRGEKPRIIVCDSLQDPHNLGAIVRSALASGAIGVLLTRERSAPLGGTAAKS 190 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ S + + + ++A LK G + +AV + D P CI++G E T Sbjct: 191 SAGAISHMDICQVTNLVKSLAELKKVGAWVFGAIKDADAVSLFDADLNVPACIVVGSEGT 250 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 GI D + IPM+G + SLN SVA+A+IL+EA RQ Sbjct: 251 GIRPLVRRECDIQLSIPMVGELDSLNSSVAAAVILFEAMRQ 291 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 7/160 (4%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASA 63 + + ++ P L + M+ V PHN A+IRTA+AVG V ++P R T+ Sbjct: 107 DLSQFSPKKGPSLLLAMDHVKDPHNFGAMIRTAEAVGALGV--IYPSRRSVGVTGTVIKT 164 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ V + + ++ LK +G ++ + D +++G E Sbjct: 165 SAGAAFRVPLYEVTNLVRSMEILKKEGYWVVGLD-HEEPRDIWSSPLPDKLVLMVGSEGE 223 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 G+++ + D IPM+G SLN SVA+AL ++E +R Sbjct: 224 GLSRLSSERCDDLRRIPMVGKTGSLNASVAAALGMFEWRR 263 >UniRef50_A5F9W1 tRNA/rRNA methyltransferase (SpoU) n=16 Tax=Bacteroidetes RepID=A5F9W1_FLAJ1 Length = 220 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 103/206 (50%), Gaps = 4/206 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R + ++L R T+ +E V++ HN SA++R+ + G+ E++ + R Sbjct: 14 LTDNRKEKFLKVLENRTKHFTIAVEDVYQMHNTSAVMRSCEVFGIQELNIIEQRFGKRID 73 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G+ WV + T+ ++ L+ +G QI+AT +N ++ D ++P+ + G Sbjct: 74 KEIALGAQKWVDINRFDTVDGCISSLRDKGYQIIATTPHENDCLIQDFDISKPSALFFGT 133 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ E L AD + IPM+G +SLN+SV++A+I+ + +N+ + L + Sbjct: 134 EKDGLSPEILEKADGFLKIPMVGFTESLNISVSAAIIIQNLTNRLRNSDI----KWKLSD 189 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPY 206 E + + + + + + Y Sbjct: 190 EEILQKRLDWAKNSIRDIKRIEARYY 215 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQ 72 R+ + +++V P N+ +IRTADA G V + A GS V Sbjct: 99 ERKMKKVLVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVN 158 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 V + + + + LK G + T LS A + ++ + +++G E G+ + LAL Sbjct: 159 VTSV-DLLEKLPELKEDGFHVYGTALS-KATSYEQVAFEEKVALVIGNEAQGVHADVLAL 216 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 D + IP++G V+SLN +VA+ +++Y Q Sbjct: 217 CDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 2/157 (1%) Query: 10 CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNS 69 + L P + +E + KP N+ I+R+ADA GV V + + + + + Sbjct: 111 LDDLQLSDPPFLLIVEAIEKPGNLGTILRSADAAGVDAVICCDSVTDLFNPNAVRSSTGV 170 Query: 70 WVQVKTHR-TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + T + + + ++ +G++ +AT + + + + D P I+MG E+ G++++ Sbjct: 171 LFSMPTVTASSDEVIKWIRQKGIRTIATTPHTD-ILYTDTDLRGPLAIVMGSEQFGLSEK 229 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 L+ D ++IPM G SLNV++A+ + L+EA RQR Sbjct: 230 WLSACDTKVLIPMAGQADSLNVAMATLITLFEAVRQR 266 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 87/155 (56%), Gaps = 6/155 (3%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR----MRTMASAAAGSN 68 + + +P+L + ++ + PHN AIIR A+ G+ H + P +R T+ ++G+ Sbjct: 75 IFKDKPNLVLMLDHIQDPHNFGAIIRNANGFGIK--HIIIPKNRACEVTPTVLKISSGAF 132 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + +++ ++ D + L+ G I ++ L D A + + PTC+++G E++G++ Sbjct: 133 TEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKATKLHKTKFATPTCLIVGNEESGVSHT 192 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 + +D + I G VQSLNV+ A+A++LYEA + Sbjct: 193 LIKHSDALVYIEQKGTVQSLNVASATAVLLYEATK 227 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 3/162 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASA 63 +C L + ++QV PHNV AI+R+A A G V + T +A Sbjct: 91 VEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPVTGVLAKT 150 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 A+G+ V + + A+ LK G + A E+D T T +++G E Sbjct: 151 ASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLD-ESGARPLHEVDLTGRTALVLGSEGE 209 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G+ + D+ +P G V SLNVS A+A+ LYE R+R Sbjct: 210 GLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVARRR 251 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 3/167 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAA 65 + +L R L V ++ + P N+ IIRTADA + V + + + A+A Sbjct: 106 SLDVLLQGRGTPLVVVLDGLQDPGNLGTIIRTADACELQGVITLEGTVDLFHPKVVRASA 165 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ + + G G+Q + E D++RPT + MG E G Sbjct: 166 GALFHLPAFGDLPAPAVLEFFTGAGVQKFVADPRGD-YSLYECDFSRPTALFMGNEARGC 224 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 + A AD+ + IPM G +SLNV VA++L +YEA RQR + + L Sbjct: 225 GEMLHAAADRVVAIPMPGQAESLNVGVAASLFIYEAVRQRLKSSLSL 271 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMAS 62 + + + ++ + ++++ PHN+ AI R+A + + T+ Sbjct: 76 DFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSALFFNFDGIIIPKHREALVNDTVYK 135 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + G+ V + + + LK G I A L + + +++D++ I++G E Sbjct: 136 TSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLEGD--NIKDVDFSGKVAIIIGNEG 193 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 GI+ + +D + IP + SLN SVA+ +I+YE R Sbjct: 194 KGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYEVIR 234 >UniRef50_Q84X80 CR004 protein n=1 Tax=Chlamydomonas reinhardtii RepID=Q84X80_CHLRE Length = 316 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 4/184 (2%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA-S 62 R RI E++A+R + +E ++ N++A+ RTADA+G VHAV M+ Sbjct: 76 ERVKRIEEVVAKRTFTVLPIVEGLYDMGNLAAVCRTADALGYGAVHAVNKADGKFKMSQR 135 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 AAG++ W+ VK + G+ +A +K G QI+ THL+ +++ +E+D+TRPT +++G EK Sbjct: 136 TAAGADKWLDVKAWDSTGECLAAMKAAGYQIVTTHLTQSSITIQEVDWTRPTAVVLGNEK 195 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182 G++ EA+A AD IIPM GMV+S N+SVA+ALILYEAQ+QR L ++ L + Sbjct: 196 FGVSAEAVAAADACAIIPMTGMVESFNISVANALILYEAQQQRIR---RLGSHADLSPDQ 252 Query: 183 QQRL 186 Q L Sbjct: 253 QMAL 256 >UniRef50_Q6MNP1 Putative RNA methylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP1_BDEBA Length = 238 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 3/183 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R +I +++A R D V +E ++ N+SA++R+A+ +G H + + + Sbjct: 29 LTDERRQKIEKVVALRNFDTAVVLEGIYDRGNISAVMRSAEGLGFGNFHVIETQEKFKEA 88 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 G++ WV+VK + D V LK QG +I THL NA EID++ T +++G Sbjct: 89 NRVTQGADKWVEVKKWKKTADCVKALKNQGYKIYVTHLDANAKPLHEIDFSGKTALVLGN 148 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E+ G+T E +A ADQ IIIPM G VQS N+SVA AL LY + R N+ L E Sbjct: 149 ERDGVTPEMIAAADQTIIIPMTGFVQSFNISVAGALGLYHISQDRLK---RRGTNASLTE 205 Query: 181 AEQ 183 EQ Sbjct: 206 EEQ 208 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 11/179 (6%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++P YA + E+LA P + + + P N+ AI+RTA AVGV V + P R + Sbjct: 79 VSPYNYASLDEILAT-HPSCLLVLAYITDPRNLGAILRTAAAVGVEGV--IIPSRRAAGL 135 Query: 61 A----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 A+AG V+V + + +LK QG +L +D V E ++ P + Sbjct: 136 TAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAE-ADAKVSLWEAEWNEPLVV 194 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR---QNAGMYL 172 ++G E TG+ + D + IP + LN SVA+A+ILYE R++ +NAG L Sbjct: 195 VIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLRRQMKGKNAGDNL 253 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%) Query: 1 MNPTRYARI----CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P + + + L + + ++Q+ N AIIRTA+ GV+ + GS Sbjct: 75 ISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAECTGVNGIIIQKNGSA 134 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + + I DA+ L+ ++ +A ++ ++++ +P Sbjct: 135 PVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEKTDS-SIYDVNFNQPI 193 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+MG E G+ L + D +P+ G ++SLNVSVA + LYE RQR Sbjct: 194 AIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYETVRQR 244 >UniRef50_B3RWG3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RWG3_TRIAD Length = 246 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 4/191 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV-WPGSRMRT 59 R ++ + R + V +E + N AI RT DA+G H + P R++T Sbjct: 50 FTKERLDKMTNAVKNRTRSIAVVLEGITNEGNEQAIYRTMDALGFQTAHRIPSPLYRLKT 109 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 AG+ W+ +++ ++ + ++ LK G +ILAT + D++ T +++G Sbjct: 110 CGRTDAGAMKWIDIESWKSTEECISQLKSCGYKILATSSENKTKTLDSFDFSNKTAVVLG 169 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E+ GI++EA+ L D I M+G V+S NVSVA+A+ILY + R Y + L Sbjct: 170 SEQEGISKEAMNLVDNVFRISMVGFVESYNVSVAAAIILYHIYQDRIRKLGY---HGDLT 226 Query: 180 EAEQQRLLFEG 190 EAEQ LL + Sbjct: 227 EAEQDDLLLQY 237 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 19/184 (10%) Query: 3 PTRYARICEMLARRQP----------------DLTVCMEQVHKPHNVSAIIRTADAVGVH 46 P YA + +++AR L + ++ + N+ AI R+A++VG Sbjct: 76 PFAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDAGNLGAIARSAESVGAA 135 Query: 47 EVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVD 104 + S + ++AG+ S + V + A+A LK +G + Sbjct: 136 GIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALARLKNEGYWVAGASEKAEGG- 194 Query: 105 FREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 + + T C++MG E TG+ + D + +P G+V SLNV+ ++ + +YE RQ Sbjct: 195 IWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQ 254 Query: 165 RQNA 168 + + Sbjct: 255 NRLS 258 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 2/149 (1%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGSRMRTMASAAAGSNSWVQVKTH 76 + + ++ + PHN+ A+ R+A+AVG + A+AG+ +++ V Sbjct: 96 GVILVLDGITDPHNLGALARSAEAVGCQGIVLPKDRSCPITAAAEKASAGALAYLPVCRV 155 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + ++ K G + + + D +++G E G+ D Sbjct: 156 TNVARSLEVFKQAGFWVYGLAGDAGSQSLYDTDLRGNVVLVVGGEGKGLRDNVRKHCDAL 215 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQR 165 + IPM G V SLN SVA + L+E RQ+ Sbjct: 216 LAIPMRGQVSSLNASVAGGVALFEVLRQQ 244 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 11/173 (6%) Query: 2 NPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG--S 55 + Y + ++L + +P V + + PHN+ A++R+A G H + G S Sbjct: 94 SEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDPHNLGAVMRSALLCGAHGIVIPKRGGAS 153 Query: 56 RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ ++AG+ + V IG+ + LK QG+ + + V R+ + T P Sbjct: 154 VTPTVIKSSAGAAERLPVARVANIGETIRRLKDQGVFVYCADMDG--VPLRKNNLTGPIA 211 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGM---VQSLNVSVASALILYEAQRQR 165 +++G E +G++Q L D + + M V S NVSVA+ +ILYE Q QR Sbjct: 212 LVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGVDSFNVSVAAGIILYEIQSQR 264 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 175 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 3/163 (1%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TM 60 P + + L + P L V ++ PHN+ A+IRTA+ G V S T+ Sbjct: 98 PADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVAGAACVVCQNDRSATVNGTV 157 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +AG+ + V +G AV LK +G ++ + +++G Sbjct: 158 VKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTDET-VWSSALPERLALVVGS 216 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 E GI+ D + PM G +LN SVA+AL ++E R Sbjct: 217 EGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWVR 259 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 175 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 11/175 (6%) Query: 4 TRYARICEMLARRQP-----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 R AR EM + L + ++ + P N+ A+IR+A A GV+ V P R Sbjct: 155 ERKARAMEMADSKASRLSARPLFIALDGITDPQNLGAVIRSAAAFGVNGVIL--PERRSA 212 Query: 59 TMA----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 ++ +AG+ + + + + A+ LK +G + + + T P Sbjct: 213 SVNAAAWKVSAGAAAHMPIARVVNLTKAIEALKERGYYSIGLDGGGSKLVGETGFETDPL 272 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +++G E G+++ D IP+ V+SLN SVA+ + LY R+ AG Sbjct: 273 VVVLGSEGKGLSRLTREACDAIASIPITSAVESLNASVAAGIALYATVNARRKAG 327 >UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0516 n=21 Tax=Borrelia RepID=Y516_BORBU Length = 228 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 3/162 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV--WPGSRMRTMAS 62 + + E +++ + ++++ P N AI+RTA+ + V T+ Sbjct: 64 DFENLLETFKKKENAFILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVLR 123 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 ++G++ +V+ T I + + LK G I + ++ +I+ + +++G E Sbjct: 124 TSSGASQYVKKMTVTNINNTINLLKNYGFWIYTGDIKGQDINKIKIN-DKKIALILGNEG 182 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 G+ + +D I IP G + SLNVSV++ ++++E +RQ Sbjct: 183 KGVHKLIKENSDFLIRIPTSGKIDSLNVSVSTGILIFEIKRQ 224 >UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casseliflavus RepID=C9A4E5_ENTCA Length = 259 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 9/161 (5%) Query: 7 ARICEMLARRQPDL------TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR-- 58 I ++ +++ DL + ++ V P NV +IRTADA G V + + Sbjct: 96 QGIFAVVEKQEQDLQTLTGNWLILDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLYST 155 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + + GSN + + I + L+ G+ I T L+ AV + E+ + ++ Sbjct: 156 KVLRSMQGSNYHLPIVEGA-IPPFLKQLQAAGVAIYGTELNKEAVPYTELPKGQAAAFIL 214 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 G E G+ QE LAL D+++ IP+ G +SLNV++A+ +++Y Sbjct: 215 GNEGQGVNQELLALTDKNLYIPIYGQAESLNVAIAAGILMY 255 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P + + +++ Q L V ++ + N AIIRTA+ GV + GS Sbjct: 75 ISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAECCGVTGIIIQEKGSA 134 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + + I DAV HL+ ++++A + V +ID +P Sbjct: 135 PINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKTDDV-IFDIDLKQPI 193 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+MG E GI+ L D +PM+G + SLNVSVA LYEA RQR Sbjct: 194 AIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEAVRQR 244 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%) Query: 8 RICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASA 63 + ++L + P L + +++ PHN+ ++IRTA+A G V S T+ A Sbjct: 112 SLDDLLDQLAGGPALVILLDRCQDPHNLGSVIRTAEAAGASAVLVPKDRSVRLTGTVVKA 171 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ V + + A+ LK G ++ +++ ++ + + T + +G E T Sbjct: 172 SAGAALRFPVISVVNVKRALDDLKEAGFWVVGLA-GESSEPLGKLAWDQRTVLAVGAEGT 230 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 G+ + D IPM G +SLN VA+AL YE R+ +G + Sbjct: 231 GLAELTRKSCDFLARIPMSGQAESLNAGVAAALGAYEWARRFHFSGDF 278 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 4/152 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWVQV 73 ++ + +E + KP N+ I+R+ADA G V P + + + A+ G V + Sbjct: 145 QRAPFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVPL 204 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + +A L+ QG++ +AT + + + + D P I+MG E+ G+++ L Sbjct: 205 VVAES-APVLAWLRAQGVRTIATTPAAEKL-YTDADLRGPLAIVMGSEQYGLSEFWLKNC 262 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + IPM G SLNV++A+ + L+EA RQR Sbjct: 263 DLPVRIPMAGQADSLNVAMATIITLFEAVRQR 294 >UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepID=C0WU39_LACBU Length = 255 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAA--GSN 68 E + + + ++ + P N+ ++RTADA G++ V + + + GS Sbjct: 102 ESIPEKLGGSWLMLDNIQDPGNIGTMVRTADAAGMNGVIFGKGTADIYNPKVVRSMQGSQ 161 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 V++ + + +A + + T L+D A+ + +++ T+ ++MG E G++ + Sbjct: 162 FHVRLYSG-DLAVWMAAFNKHNVPVYGTELNDQAISYDDVEPTKQFALVMGNEGNGVSAD 220 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 L DQ++ IPM G +SLNV+VA+ ++++ + Sbjct: 221 LLDKTDQNLYIPMNGEAESLNVAVATGILIFHFVK 255 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 7/149 (4%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR----TMASAAAGSNS 69 ++ + V ++ V PHN AIIR+A+A + P R T+A AAG+ Sbjct: 277 SKSSNPIIVALDGVTDPHNFGAIIRSAEAFDCKGIIV--PQRRSAGLTGTVAKVAAGALE 334 Query: 70 WVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA 129 + V + A+ LK +G I+ D V E P +++G E GI+ Sbjct: 335 HIPVSRVVNLNRAIDELKKKGFIIIGLS-GDGQVPISEFKEKAPVVVIVGAENKGISLLV 393 Query: 130 LALADQDIIIPMIGMVQSLNVSVASALIL 158 D + IP+ G SLN SVA+A+ L Sbjct: 394 QKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 3/167 (1%) Query: 2 NPTRYARICEMLARRQ-PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 P + + + L + L + +E V PHN+ A +R+ADA GV V + T Sbjct: 82 RPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQAVIVPRRNAAGLTP 141 Query: 61 A--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A G+ + + + L+ +G+ ++ T L + + ++M Sbjct: 142 VACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSESLFTFQAPESLAVVM 201 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E +G+ + DQ + IPM G VQSLNVSVA+ ++L++ + QR Sbjct: 202 GAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVMLFQVRAQR 248 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 4/153 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQV 73 R L + E V KP N+ +++R+ADA GV + + + A+ G+ V + Sbjct: 116 RPNGLYLVAEAVEKPGNLGSMLRSADAAGVDGFIICNKCTDIYNPNVIRASTGALFSVPL 175 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 +A LK ++ LA + + + ++D T+ I++G E+TG+T+ + + Sbjct: 176 AEAEN-QEAYDWLKKNNIRTLAATPHTDQI-YTDVDMTQAVAIVVGTEQTGLTELWMEHS 233 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + IPM+G + SLNV+ A+ ++LYEA RQR Sbjct: 234 DLPVRIPMLGKIDSLNVATATTILLYEAARQRN 266 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 4/162 (2%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAA 65 R L + L V +E V KP N+ A++R+ADA V P + + + ++ Sbjct: 109 RTLADLDLPESPLIVVLESVEKPGNLGAVLRSADASKADAVIVCNPLTDLFNPNLIRSSI 168 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V + + LK + ++IL L D+A + + D T I+MG E TG+ Sbjct: 169 GAIFTVPTVACSS-QACMNFLKERNIKILTAQLQDSA-PYYDSDMRGGTAIVMGTESTGL 226 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 T AD I IPM+G + SLNVSV++A++++EA RQR Sbjct: 227 TDAWRKAADAHIRIPMLGQLDSLNVSVSAAILMFEAVRQRSF 268 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 82/155 (52%), Gaps = 6/155 (3%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNS 69 + R + + ++++ P N+ IIRTA A G+ + + + + A+ G+ Sbjct: 110 LFHNRNRGIILILDRIQDPGNMGTIIRTAVAAGIEGIICLKGSVDIYNLKVIRASMGAIF 169 Query: 70 WVQVKTHRTIGDAVAHLKGQ--GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQ 127 + + T + + ++ + +++ T L+ + + EIDY P +++G E GI + Sbjct: 170 SIPILTGVSFKR-LQKIRDEYPDYKLICTDLN-TSKFYHEIDYQEPLMLVIGNEARGIRE 227 Query: 128 EALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 E L+LAD I IP++G + SLN +V++A++LY+ Sbjct: 228 ELLSLADIKIKIPLMGNIDSLNAAVSTAIVLYDIV 262 >UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococcaceae RepID=Q8DNE3_STRR6 Length = 252 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 7/167 (4%) Query: 2 NPTRYARICEMLARRQPDL----TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 P + + Q DL + +E V P NV IIRTADA G V + + Sbjct: 87 TPQGIVAVVQKEEVGQADLSQGKFLFLEDVQDPGNVGTIIRTADAAGFTGVIVSDKSADI 146 Query: 58 RTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 ++ + GS+ + + + + K + +LAT LS ++VD+RE+ Sbjct: 147 YSLKTLRSMQGSHFHLPIYRMTSPA-LLDETKKVAIPVLATTLSKDSVDYRELPSIENFV 205 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 ++MG E GI+ ADQ + I M G +SLNV+VA+ ++++ Sbjct: 206 LVMGNEGQGISPLMAESADQLVHISMKGQAESLNVAVAAGILIFHLS 252 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ + P N+ I RTA+A G + + + + G+ + + Sbjct: 132 VIVLDNLQDPGNLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRSTMGAVFRMPFFYVKD 191 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + AV L QG++ A HL+ V + E DYT L+G E G+ E AD I Sbjct: 192 LPAAVKSLSSQGIRTYAAHLNGKNV-YDEEDYTEGCAFLIGNEGNGLRDEVSECADCLIR 250 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQN 167 IPM G +SLN +VA+A++++EA RQR+ Sbjct: 251 IPMCGKAESLNAAVAAAVLMFEAGRQRRK 279 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 3/149 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + +E + P N+ ++RTA+ VG+ + M + + G+ V Sbjct: 116 LLLLEDIRDPGNLGTMVRTAEGVGMTGIVLSKDSVDMFNPKVIRSTMGAIFRVPFFYAED 175 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + +K + + I A HL AV + ++ Y + IL+G E G++ +A +L+ Q I Sbjct: 176 FYACLNQIKNEEIAIYAAHL-QGAVWYDKVSYQGKSAILIGNEANGLSDKATSLSTQRIK 234 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQN 167 IPM G V+SLN ++A+A+++YE+ RQ +N Sbjct: 235 IPMEGNVESLNAAIAAAVLMYESYRQIRN 263 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 7/173 (4%) Query: 2 NPTRYARIC---EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 NP + E+ + + + +++ P N+ IIR+A A G + + Sbjct: 92 NPQGIIAVVKNKELNIKDEQGFYILADRIQDPGNMGTIIRSAHASGALGIITTKGTVDVY 151 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 A GS ++ + + V+ L+ G +++++ L D+ ++F ++D I Sbjct: 152 NEKTLRATMGSIFYIPIIQDENLEK-VSTLRQMGFKLISSSL-DSDINFYDMDLRGKIII 209 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +G E G+ Q+ ++D ++ IPM G +SLN +VA++++++E RQ+ N+ Sbjct: 210 AIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEVVRQKLNSH 262 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 30/180 (16%) Query: 2 NPTRYA-RICEMLARRQPDLTVCMEQVHKPHNVSAIIRT---------------ADAVGV 45 P R + +++ L + +++V PHN+ A +R+ A A+ Sbjct: 98 TPARGEGELADLVDAEPEPLLLVLDRVQDPHNLGACMRSAAAAGAHGVVAPRDRAAAL-- 155 Query: 46 HEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDF 105 + AAG+ + + + L+ G+ ++ + Sbjct: 156 -----------SPAVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAA-GEAEKSC 203 Query: 106 REIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E+D P +++G E G+ + D+ + IPM G ++SLNVSVA+ ++L+EA RQR Sbjct: 204 YEVDLRGPLALVLGGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQR 263 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 7/174 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P +I ++L + + L V ++++ N +IIRT+ VG + + Sbjct: 76 LSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRTSACVGADAIIIPKKYTA 135 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 M ++G+ V + + I + + L G++I++ N + + ID++ PT Sbjct: 136 MIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSATEKSN-IYWYNIDFSGPT 194 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 +++G E+ GI+ + L ++ + IP I + SLNVSVA +ILYE RQR++ Sbjct: 195 ALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVILYEVFRQRKSQ 248 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 5/163 (3%) Query: 4 TRYARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT-- 59 YA + +++A R++P L V ++ V PHN+ AI+R+A +G V + + Sbjct: 93 FEYAALEDLIAAPRQRPALFVALDSVTDPHNLGAIVRSAHVLGADGVILPKDRAAQVSGV 152 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + +AG+ + + + A+ LK + I + A D T C+++G Sbjct: 153 VTKVSAGATEQIAIAQVTNLARALEQLKQAEVWIAGLAAGEGATSLPAFDATGALCLVLG 212 Query: 120 QEKTGITQEALALADQDIIIPMIG-MVQSLNVSVASALILYEA 161 E TG+ D I IPM+G V SLNVSVA+ + LYE Sbjct: 213 AEGTGLRPLVARTCDFLIEIPMLGAGVGSLNVSVAAGVALYEV 255 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 172 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 4/168 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMR 58 + +Y + + + D + ++ + P N AIIR+A+ G + Sbjct: 64 LKDFQYHDLGSIF-KDGSDKVLILDHIQDPQNFGAIIRSANVFGFKHIIIPKDRACDVTP 122 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++ ++G V+V ++ DA+ LK +G I A+ L+ A + + I++ Sbjct: 123 SVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQQAKKLNDAKFNEKIAIIV 182 Query: 119 GQEKTGITQEALALADQDIIIPM-IGMVQSLNVSVASALILYEAQRQR 165 G E +G+++ L +D+ I I VQSLNVSVA+ ++LY ++ Sbjct: 183 GNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLYTVFNKK 230 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 172 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 5/158 (3%) Query: 8 RICEMLARRQPDLT-VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAA 64 + E+ +++ +L V ++++ P N+ IIRTA++ V A Sbjct: 109 SLEEIKSQKGKELFFVILDRIQDPGNMGTIIRTAESANADAVIITKGSVDPYNSKTLRAT 168 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 G+ + + + LK ++++A L + + +IDY I++G E G Sbjct: 169 MGAIFHMPIIQCDD-DRWLDDLKENEVKLIAADLDTDKT-YIDIDYNTSIGIIIGNEANG 226 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 I++ L+ DQ +IIP++G ++SLN SVA+++++Y+A Sbjct: 227 ISEALLSKVDQRVIIPILGKIESLNASVAASILIYKAA 264 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 2 NPTRYARICEMLARRQPDLT------VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 P A +C + A P +T + +++V P N+ +IRTADA G+ V Sbjct: 116 TPQGIAAVCAIPAP--PSMTTLSGQFLLIDRVQDPGNIGTMIRTADAAGMTGVVLGEGSV 173 Query: 56 RMRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + A+ GS + V ++ + V LK + + + T L++ + + I+ Sbjct: 174 DLFNSKVIRASQGSIFHMPVIRG-SLIEWVEKLKEKNIPVFGTSLTEAS-SYTAIEPQPE 231 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 +++G E G+ E L +DQ+I IP+ G +SLNV+VA+ ++LY Sbjct: 232 FALIVGNEGEGVQSELLEGSDQNIYIPIYGQAESLNVAVATGILLY 277 >UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selenomonas RepID=C4V3B4_9FIRM Length = 276 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 3/154 (1%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TMASAAAGSNSWVQVKTH 76 L + +++V P NV I+RTADA G V + + + + AA GS ++ T Sbjct: 124 PLYLALDRVQDPGNVGTILRTADAAGASGVILLRGCADVYGSKVVRAAMGSLFYLPFVTG 183 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 D V K + A + V + +RP+ +++G E G+++ L A Q Sbjct: 184 VDEEDLVRFAKENVLCFYAAACDTDGVTHFAAELSRPSLVVLGNEANGVSERLLR-AGQH 242 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 + +PM G +SLNV+ A+ ILYEA RQR+ AG+ Sbjct: 243 LYVPMCGRAESLNVAAAATAILYEAIRQRKYAGI 276 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 4/166 (2%) Query: 4 TRYARICEML-ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TM 60 TR ++ ML + + ++ + N AI RTA+ GV + GS Sbjct: 80 TRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECAGVDAIIIPERGSVSVGGDA 139 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +AG+ + V +I A+ L+ G++I+A A + ++ P I+MG Sbjct: 140 IKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAAS-EKAADLYTDVPMKLPLGIVMGA 198 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 E G + + L +AD + IP +G + SLNVSVA+ +++YE RQ++ Sbjct: 199 EDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVVRQQR 244 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRT 78 + +E V P N+ IIRTADA G V + + + GS+ + + Sbjct: 103 YLILEDVQDPGNLGTIIRTADAAGFDGVFLSEKSADVYNSKTLRSMQGSHFHLPIWR-TD 161 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 I ++ +LAT LS +VD++ + + ++MG E GI+ E LADQ + Sbjct: 162 IYKICREMQEHNTPVLATTLSKVSVDYKTVPHQESFALVMGNEGQGISAEMTTLADQLVH 221 Query: 139 IPMIGMVQSLNVSVASALILY 159 I M G +SLNV+VA+ ++++ Sbjct: 222 ITMPGQAESLNVAVAAGILIF 242 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 5/170 (2%) Query: 3 PTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 P YA + E++ R L V ++ V N AI+R+A+ VG V + + Sbjct: 170 PFAYADLSEIIQRAGSANALVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGV 229 Query: 61 A--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 +AG+ + + + A+ LK G + E ++M Sbjct: 230 GAYKTSAGAVLHLPIAQVSNLPRALEELKAAGFWTCGSTEHA-TQSVWEAPMGGRLALVM 288 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G E +GI++ L D +P G V+SLNV+ A+ ++ YE R+ Q A Sbjct: 289 GSEGSGISRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLRRTQEA 338 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 170 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 3/151 (1%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQVK 74 + + ++ + PHN+ A +RTA A GV V + + A G+ + + Sbjct: 90 ERPFILVLDSIQDPHNLGACLRTAMAAGVDAVVLPNSCAADITPVVRKIACGAAEALAIF 149 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + V +K +G+ ++ + ++D + +++G E+ GI D Sbjct: 150 RVANLKREVEMMKEKGLWVVGGA-GEAEKSLFDLDLSGGLVMIVGNEEKGIHYGLRQTCD 208 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 IPM ++SLNVSVA ++L+EA+RQR Sbjct: 209 WLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 170 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 6/157 (3%) Query: 8 RICEMLARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MAS 62 RI +++A+ + + +++V HNV A++RTA V V S + MA Sbjct: 94 RIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVLRTAACFNVDAVVLTEHNSPSESCGMAK 153 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A++G+ V V + + +LK + S +++++ +++G E Sbjct: 154 ASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYGFDASGG-TCLHQVEFSERRVVILGAEG 212 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 G+ D + IPM ++SLNVS A+A+ +Y Sbjct: 213 KGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAIAMY 249 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%) Query: 4 TRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA 61 YA + ++L R P L V ++ V N AI+R+A+ VG V + T+ Sbjct: 130 FPYADVADILDRAGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAAGVIIANKRAAGVTVG 189 Query: 62 --SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 +AG+ + + I A+ LK G + + + ++MG Sbjct: 190 SYKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVSGASERAEG-SCWDAPFEGRVALVMG 248 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREN 175 E GI++ L D +P GM +SLNV+ A+ + +E R +NAG + E Sbjct: 249 SEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATTALCFEWLR--RNAGELMGEE 302 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ + P NV +IRTADA G+ V + + + + GS+ + V R Sbjct: 113 WLLLDNIQDPGNVGTMIRTADAAGLAGVILGKGTADIYNTKVLRSMQGSHYHLPVLQ-RE 171 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + V K QG+ + T L++ A+ + E + +++G E +G++ E LA +++ Sbjct: 172 LTEVVQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLY 231 Query: 139 IPMIGMVQSLNVSVASALILY 159 IPM G +SLNV++A+ ++++ Sbjct: 232 IPMKGQAESLNVAIAAGVLMF 252 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%) Query: 2 NPTRYARICEM---LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 P + EM + +L + ++ + P N+ IIRTADA GV V + Sbjct: 82 TPQGVIAVVEMNIPKVQEDNNLIILLDAIQDPGNMGTIIRTADAAGVDAVVLGDGCVDIF 141 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + A GS + + T T+ + L+ QG ILAT L D AV++ E+ + Sbjct: 142 NDKVIRATQGSIFHIPIYT-ATLEQEIHMLQTQGFTILATALHD-AVEYTEVSVHNKVGL 199 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++G E GI L A+Q I IP+ G +SLNV +A+ +++Y ++ Sbjct: 200 ILGNEGAGIAPSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246 >UniRef50_B0MYM4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYM4_9BACT Length = 228 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 5/209 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+ R + L R +T+ E + N SA++R +A GV ++H + + Sbjct: 23 MSEERRQVLQRTLDSRTRYMTILTENTYHAQNASALVRHCEAFGVQDIHTIETRCKFNPN 82 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR-PTCILMG 119 + G++ W+ + HRT +A+A LKG+G +I+AT D P ++ G Sbjct: 83 VNIVRGTDKWIDLHRHRTTAEAIADLKGRGYRIVATTPHREDKTPETFDVAASPFVLVFG 142 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E GI+ E +A AD+ + IPM GMV+SLNVS ++A+++Y + + + L Sbjct: 143 TEHAGISDEIVAAADEFLRIPMCGMVESLNVSASAAILIYMLSSRMRE----TVPDWRLT 198 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLPYPH 208 ++ +L+ + + YP Sbjct: 199 AGKRAEILYRWTFASVRDAEAILRRKYPE 227 >UniRef50_C0QAQ0 SpoU n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAQ0_DESAH Length = 291 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 1/145 (0%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHA-VWPGSRMRTMASAAAGSNSWVQVKTHR 77 D + ++ + NV +I R+ DA G + PG + A G+ W+ Sbjct: 133 DFHIALDGLRSLFNVGSIFRSCDAAGFSSLILGNTPGRENAAVRKTAMGTADWMPHTQTV 192 Query: 78 TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDI 137 + + +K QG I A ++ + + + D+ +++G E+ GI+ LA+ DQ + Sbjct: 193 DLAQTLVDMKAQGYTITAVETAEQSKPYHDNDWHHRGVLVVGNEEYGISSHVLAVCDQVV 252 Query: 138 IIPMIGMVQSLNVSVASALILYEAQ 162 IPM G SLNV+ A+A++++ Sbjct: 253 HIPMFGRKNSLNVANAAAILMFHIT 277 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 5/163 (3%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAA 65 ++ ++L P L V P N+ I+R+A+A G V + + ++ Sbjct: 126 KLEDLLRAENPMLLGVA-GVQDPGNLGTILRSAEAFGATGVLIGDKTASPWNPKVIRGSS 184 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 GS + V A+ L+ +G+QILAT E+D+T PT +L+G E G+ Sbjct: 185 GSVFRLPVVKVE-WPAALEQLRAKGVQILATSSHKGE-PLPEVDFTGPTIVLIGGEGAGV 242 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 ++ LA D + IP V+SLN +A+++++YEA RQR Sbjct: 243 PRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQRNTQ 285 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%) Query: 2 NPTRYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT 59 P + A +C M + + ++ V P N+ +IRTADA G+ V + Sbjct: 85 TPQQIAAVCHMPEEKLATARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFN 144 Query: 60 MA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 +A GS+ + V R + V LK +G+++ T L + A ++EI + ++ Sbjct: 145 GKTLRSAQGSHFHIPVVR-RNLPSYVDELKAEGVKVYGTALQNGA-PYQEIPQSESFALI 202 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 +G E G+ L D ++ +P+ G +SLNV+VA+A+++Y + Sbjct: 203 VGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLR 247 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 4/163 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAG 66 + Q L V ++QV PHN+ A++R+ A G+ V S A +AG Sbjct: 161 LERTKENAQIPLIVALDQVTDPHNLGAVLRSGGAFGITGVLISERRSASVNAAAWKVSAG 220 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDY-TRPTCILMGQEKTGI 125 + + V V + A+ LK G ++ V R++D T P ++ G E G+ Sbjct: 221 AAARVPVARETNLVRALGELKEAGCFVVGLD-GGGDVSLRDLDLATGPLVVVTGAEGKGL 279 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 ++ DQ + IP+ V+SLN +VA+ + LYE +R A Sbjct: 280 SRLVRETCDQIVSIPISSAVESLNAAVATGIALYEVASKRAEA 322 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ V P N+ I+RTADA G V + + + GS+ + V Sbjct: 110 FIVLDAVQDPGNLGTIVRTADAAGFDAVVLGTGTVDLYNDKVLRSMQGSHFHIPVFQ-AN 168 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + LK +G+Q+ T L ++ D+ + I++G E G++ + + LAD + Sbjct: 169 LQEYLPILKEKGVQVAVTALHRDSKDYSVLQGATDVAIVVGNEGQGVSDDVIDLADVVVT 228 Query: 139 IPMIGMVQSLNVSVASALILY 159 IP+ G +SLNVS+ASAL++Y Sbjct: 229 IPIFGKAESLNVSIASALLMY 249 >UniRef50_C7NJ34 rRNA methylase n=2 Tax=Micrococcineae RepID=C7NJ34_KYTSD Length = 271 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 4/165 (2%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 PT + ++ P L V E + KP N+ AI+RTADA GV V A P + + Sbjct: 107 PTPGVALADLPQPDGPGLYVVAEHLEKPGNLGAILRTADAAGVDAVIAADPVTDWGNPNV 166 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 + G+ V V T T + + L G+GM ++AT V ++D T P I +G Sbjct: 167 VRGSKGTVFSVPVATAPT-PEVLDFLAGRGMTLVATTPHTE-VLHTQVDLTGPVAIAVGA 224 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 EKTG+T AL A + IPM+G SLNV+ ++A+++YEA RQR Sbjct: 225 EKTGLTASALEGATHRVRIPMVGRANSLNVATSAAIVVYEAVRQR 269 >UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=Q6MA83_PARUW Length = 265 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEM-LARRQP--DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 + P R+ + ++ L ++P V E + KP N+ I+R++DAVG+ + + + Sbjct: 94 IAPQRHLTLDDLSLKTKKPMAPFFVVAEAIEKPGNLGTILRSSDAVGIDGLIVCDRCTDI 153 Query: 58 RT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + A+ G+ V R D + L QG+ ILA +F ++D T P Sbjct: 154 YNPNVVRASVGTLFTVPTVEARG-EDILLWLNKQGIDILAATPHAE-KEFTQVDLTSPVA 211 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I +G E+ G+++ + A + IPM+G+ SLNV++A+ L+LYE RQRQ Sbjct: 212 IAVGTEQLGLSERWMKQATMQVRIPMMGVADSLNVAMATTLLLYEVLRQRQ 262 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 10/164 (6%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAG 66 + E R++ + V ++QV P N+ AI+RT A G + S + +A AAG Sbjct: 155 LMEGALRQERPVLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAG 214 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVD--------FREIDYTRPTCILM 118 + V + A+ L G L +R+ R I+M Sbjct: 215 AMDRVPFARVTNLSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVM 274 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 G E G+ + D + IPM G +SLNVS A+++ LYEA Sbjct: 275 GSEGEGLRRLVAEHCDHLVKIPMPGGFESLNVSHATSIALYEAL 318 >UniRef50_Q2S465 RRNA methylase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S465_SALRD Length = 247 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 4/187 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP-GSRMRT 59 M R RI ++A R + +E + NVSA++R+A+A+G ++H V R + Sbjct: 38 MRERRLDRIQTVVANRTRSVVPVVEGLVNTGNVSAVMRSAEALGHQDMHVVSGEHDRYKH 97 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 A G+ W+ V HL+ G +++A HL + V R++D+T+PT ++ G Sbjct: 98 SQRTAQGAQHWLDVWHWDAPTACATHLQDAGYRVVAMHLHADTVPIRDLDFTQPTALVFG 157 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G+T L +D +P+ G +S NVSVA+A+ LY AQ+ R ++ L Sbjct: 158 NEDAGVTDTMLEASDAACEVPLPGFTESFNVSVAAAVALYHAQQDRL---DRQGHHADLS 214 Query: 180 EAEQQRL 186 + + RL Sbjct: 215 DEARARL 221 >UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR56_AZOPC Length = 274 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 + L L + +E + KP N+ AI+RTA+A + P + + + ++ G Sbjct: 114 LLADLNLSNNPLIIVLESIEKPGNLGAILRTAEAAKIDATIICNPSTDIYNPNVVRSSIG 173 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + +A+LK + +QI A L+ + D+T + I++G E G+T Sbjct: 174 CLFSNPIAVASN-EETLAYLKSKSVQIFAAELTAFKQ-YYNTDFTSASAIVIGAEVNGLT 231 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 L A Q I IPM G++ SLNVSV+ A+I +EA RQR + Sbjct: 232 NFWLDNAHQRIKIPMQGIIDSLNVSVSVAIITFEAIRQRNS 272 >UniRef50_Q09CR8 RRNA methylase n=2 Tax=Cystobacterineae RepID=Q09CR8_STIAU Length = 226 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 12/205 (5%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW-PGSRMRT 59 + R +I ++ +R TV ++++ N++A++RT +A+GV EVH V P + Sbjct: 22 LLDVRKEKIDRVVEQRTRTFTVVLDRLEDSFNMAAVLRTCEAMGVQEVHVVINPEAPFLP 81 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + A G + W+ VK ++T + HL+ +G + A+ + + A + + I+ G Sbjct: 82 NSRVAQGCDKWLDVKLYKTFAECREHLQERGFALYASAIREGATSLYSMRFDSKVAIVFG 141 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR-----------QNA 168 E+ G++++ LA D IPM G QS+N+S A++ + R + Sbjct: 142 NERFGVSEDVLAGVDGTFWIPMRGFSQSINISAAASACVSRVMAWREEHLGKVGDLTEEE 201 Query: 169 GMYLRENSMLPEAEQQRLLFEGGYP 193 LRE + +Q++ +F+G P Sbjct: 202 AQALRERFYVLALKQRKRIFKGKQP 226 >UniRef50_D0MG21 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG21_RHOM4 Length = 259 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 5/187 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR-T 59 + R RI ++L R + +E + NVSA++R+A+A+G + + T Sbjct: 52 LTERRRQRIEQVLDGRTYTVVPVVEGLANTGNVSAVMRSAEALGYQGFGIIKGQVQKYKT 111 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 A G++ W+ V T T +AV LK G +I+AT L + A D+T PT ++ G Sbjct: 112 SERTAQGADKWLDVWTWPTAAEAVPALKAAGYRIVATAL-EEAEPIDTFDFTVPTALVFG 170 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G+++E LA+AD +IP++G QS N+SVA+A+ LY AQR R + L Sbjct: 171 NEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALYHAQRDRLA---RRGRHGDLS 227 Query: 180 EAEQQRL 186 + L Sbjct: 228 PEWKATL 234 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 3/160 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 I +L ++ + V ++ V N AI+R+A A GV V GS + +AG Sbjct: 86 IESVLKEKENPVFVLLDGVTDTRNFGAILRSAAATGVDAVFISSTGSAPLNGDVVKTSAG 145 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 V + + + D V +LK + L + + D P ++ G E GI+ Sbjct: 146 GAFKVPISKVQHLKDVVYYLKAHDIPTLGIT-EKSTETLYDSDLKGPLALVFGAEDVGIS 204 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 L + D +PM V SLNVSVA A++ YE RQR+ Sbjct: 205 NGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYETIRQRR 244 >UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A651_MYCS5 Length = 233 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 3/161 (1%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 Y+ I ++ + P + + ++ + +N+ AIIR+A+A G+ ++ + Sbjct: 68 DFTYSDINKIYESK-PKIVLVLDHIMDTYNLGAIIRSANAAGIKDIVMPKENCADITSNV 126 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++G + ++ + LK I + L N+ + Y P ++G Sbjct: 127 LKVSSGGFIGINFYKVSSLNAFLNKLKKHSYWIYGSMLDKNSTSYYSAKYNFPMAFILGN 186 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEA 161 E+ GI++ AL D+ I IP G V+SLNVSVA+ ++L++ Sbjct: 187 EEKGISKSALVEVDEKIHIPQSGSVESLNVSVAAGILLFDI 227 >UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=A4XKC2_CALS8 Length = 271 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%) Query: 2 NPTRYARICEMLAR-----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 P C + ++ + V ++ V P N+ IIR ADA G V V Sbjct: 103 TPQGVLAECSFFDKELDVLKKHNRVVVIDSVQDPGNLGTIIRCADAFGFECVITVNGTVD 162 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + + +A GS V V R + + L +G + T + VD ++ Sbjct: 163 VYNPKVVRSAMGSMFHVDVVRERKKEEVLEALNKRGFALYVTTPYGD-VDISKLSVDDRF 221 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 I++G E G+ L A + + I M G +SLN +VA+A++LYE +++ Sbjct: 222 AIVIGNESKGVDVAFLENATKKVKISMPGKAESLNSAVAAAIVLYELRKK 271 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 12/172 (6%) Query: 2 NPTRYARICEM-------LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 NP A + E L + D+ V +++V P N+ A+IRTADAVG V + Sbjct: 119 NPQMVAGVFEQQYHQLAGLKPKGNDVYVALDRVRDPGNLGAVIRTADAVGAKGVILIGDT 178 Query: 55 SRMRTM--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT- 111 + ++ A GS V + + D + KG ++ THL AVD+R I Y Sbjct: 179 TDPYSLETVRATMGSVFSVPLYR-ASEADFLNWRKGFSGLVVGTHL-KGAVDYRTIPYAN 236 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +P ++MG E+ G+ D+ IP G SLN+++A+ ++LYE +R Sbjct: 237 KPVILIMGNEQQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRR 288 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 24/191 (12%) Query: 1 MNPTRYARICEMLARRQ------------------PDLTVCMEQVHKPHNVSAIIRTADA 42 ++P +Y+ + E+ R + L + ++ V P N+ A+IR+A A Sbjct: 143 VDPFQYSSLNELADRAEKKAKAMEAANSAAARIAARPLFIALDGVTDPQNLGAVIRSAAA 202 Query: 43 VGVHEVHAVWPGSRMRTMA----SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHL 98 G + V P R ++ +AG+ + + V + A+ LK +G ++ Sbjct: 203 FGANGVIL--PERRSASVNAAAWKVSAGAAAHMPVARVVNLTKALEGLKERGYYVVGLDG 260 Query: 99 SDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 + + + P +++G E +G+ + D IP+ V+SLN SVA+ + L Sbjct: 261 GGDKLVGETGFESDPLVVVLGSEGSGLGRLVRETCDAIAGIPISSSVESLNASVAAGISL 320 Query: 159 YEAQRQRQNAG 169 Y R+ A Sbjct: 321 YAVSNARRKAA 331 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 2/165 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRT 59 +P Y +L + + ++ + P N++ ++RTA+A GV V + Sbjct: 83 SPYPYVDFATLLDPAPESIVLLLDHLQDPQNIATLLRTAEAAGVRGVVLPERRAAGITPA 142 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + +A+AG+ +Q+ + AV L+ G I+A NA P +L+G Sbjct: 143 VVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVALEPGPNAQSLFRAPLPLPLVLLVG 202 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 E G++ L AD +IIPM+G ++SLN +VA ++ LYE R+ Sbjct: 203 AEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSIALYEIVRR 247 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 3/145 (2%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVK 74 V ++QV +NV AI+R+A V V S + ++G+ V V Sbjct: 106 TASTVVLLDQVTDINNVGAIVRSAACFDVDAVILPEHHSPSENCIITRVSSGAADLVPVV 165 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 + + +LK G + + EI + I++G E GI + D Sbjct: 166 RVGNLVKTMEYLKQNGYWCYGMDVDGD-KALHEISFCERRAIILGSEGKGIRRLTREHCD 224 Query: 135 QDIIIPMIGMVQSLNVSVASALILY 159 + IPM + SLNVS A+A++LY Sbjct: 225 HLVKIPMSARINSLNVSNAAAIVLY 249 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 8/154 (5%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA----SAAAGSNSWVQ 72 P L V ++QV PHN+ A++R+A A G V + P R ++ +AG+ + V Sbjct: 204 HPPLLVALDQVTDPHNLGAVLRSAAAFGADGV--IIPEHRAASVNAAAWKVSAGAAAIVP 261 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR-PTCILMGQEKTGITQEALA 131 V + A+ LK G ++ V ++ T P ++ G E GI++ Sbjct: 262 VAQATNLTRALQDLKRAGAFVIGLD-GGGDVALPDLQLTDVPLVVVTGSEGRGISRLVRD 320 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 DQ + IP+ ++SLN +VA+ + LY+ +R Sbjct: 321 TCDQIVSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--R 56 M YA + +L + + + V ++ + P N+ A++R+A +G V S Sbjct: 81 MREFPYAALEALLEKPTGEREPLVILDCLQDPQNLGAMLRSACFLGARGVIVPRDRSARV 140 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ AAG+ +++ V + A+ LK G+ I + A + D T P + Sbjct: 141 TSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLD-AQAAQTIYDADLTVPLGL 199 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E+ G+ D + IP G +QSLN + + A+ L E QR+R Sbjct: 200 VVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2 Tax=Archaeoglobaceae RepID=Y2399_ARCFU Length = 224 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 10/171 (5%) Query: 1 MNPTRYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 ++P +YA ++ + + ++ V N+ A IRTA+ G V V P R+ Sbjct: 57 VSPIKYADFEFIVKKALTGGSFILFLDNVVDQRNIGACIRTAEFFGAAGV--VLPKRRVG 114 Query: 59 TM----ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 ++ A+AG+ + + A+ LK G LA L D + P Sbjct: 115 SIQEGAVKASAGAVFHIPIARVENFASAIKKLKKLGFTTLAADLDGE--DLEAVSLLLPA 172 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E G+++ D + IP +G V SLN+SVA+ + LY RQ+ Sbjct: 173 AVVIGGEDRGVSRPVKKQCDFVVKIPGVGKVNSLNLSVAAGIFLYTLSRQK 223 >UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03G93_PEDPA Length = 255 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRT 78 + ++ V P N+ ++RTADA G V + A GS +Q+K Sbjct: 112 WLVLDNVQDPGNIGTMVRTADAAGFTGVVFGDGTADFYNPKILRAMQGSQYHLQLKRL-N 170 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + K QG I + L +NA D+R+ID ++MG E G+++ + + D ++ Sbjct: 171 LEKWIRNCKDQGSVIFGSILDENARDYRKIDVPDQFSLIMGNEGNGMSERLIEMTDMNLY 230 Query: 139 IPMIGMVQSLNVSVASALILY 159 IP+ G +SLNV+VA+ ++++ Sbjct: 231 IPIKGSAESLNVAVAAGVLMF 251 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 3/163 (1%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQV 73 + L V ++ + P N+ AIIR+ A V S + +AG+ V V Sbjct: 173 KNSPLIVALDGITDPRNLGAIIRSVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPV 232 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + A+ KG G +L + P CI++G E G+++ Sbjct: 233 ARAGNLNRALESFKGMGYFVLGLDGDGDVSLPALAVAKEPVCIVVGSEGKGLSRLVRENC 292 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENS 176 DQ + IP+ ++SLN S+A + LYE RQR + G + N Sbjct: 293 DQIVSIPIDSAMESLNASMAVGITLYEIARQR-SGGSAEQGNP 334 >UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRI6_9FIRM Length = 262 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 4/148 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWVQVKTHRT 78 + +E + N+ IIR+ DA + V + + +A GS + + Sbjct: 117 FIILENLQDMGNIGTIIRSCDAFSIDGVILAGDCADVFAPKTVRSAMGSLFRLPIYCC-D 175 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 +A+ L+ G + + LSD +V E + T +++G E G++ L D+ + Sbjct: 176 TEEAITLLQKGGFTVYSAELSDRSVRLGEEKLPQKTAVVIGNEGNGVSDTVKKLCDKSLF 235 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQ 166 IP+ +SLN SVA+++I +E + R+ Sbjct: 236 IPIS-SAESLNASVAASVIAWEMSKVRE 262 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 20/190 (10%) Query: 1 MNPTRYARICEMLARRQ------------------PDLTVCMEQVHKPHNVSAIIRTADA 42 + P +Y + E++ R + L + ++ V P N+ A+IR+A A Sbjct: 139 VQPYQYHSLQELVERAEKKARAMEAADSDSARINARPLFIALDGVTDPQNLGAVIRSAAA 198 Query: 43 VGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSD 100 G + V S T A +AG+ + + V + A+ L+ +G + Sbjct: 199 FGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGG 258 Query: 101 NAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 + + T P +++G E G+++ D IP+ V+SLN SVA+ + LY Sbjct: 259 DKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYA 318 Query: 161 AQRQRQNAGM 170 R+ A + Sbjct: 319 VANARRLAAL 328 >UniRef50_A4S6N6 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S6N6_OSTLU Length = 216 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 5/187 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS-RMRT 59 + R R+ +L R L +E V+ N+ A+ RT +A+G+ V + Sbjct: 27 VGEERRMRLENVLEHRSFSLLPILEGVYDVGNILAVCRTTEALGIGCASIVSSKGLSFKA 86 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + G+ W V+ T A+ K +G ++L T D A D+T PT ++ G Sbjct: 87 SGRTSGGALKWQHVEQFETSERALRVAKAKGYRVLTTEF-DGAQPLSHYDWTVPTAVVFG 145 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E+ G++ EA AL D + IPM G +SLN+SVA+AL++ A R N + L Sbjct: 146 NEREGVSDEARALRDGAVYIPMFGFTESLNISVAAALVMSHAVTDRIN---RRGFHGDLT 202 Query: 180 EAEQQRL 186 E E++ L Sbjct: 203 EEEKRIL 209 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 3/159 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 I + + Q L + ++ + N+ AI R+A G + G ++AG Sbjct: 104 ISHVTEQGQTPLFLILDGITDVRNIGAIARSAVCCGAQAIIIPDRGIAALNEEAIKSSAG 163 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V ++ A+ L G++++A+ + + + P ++MG E G+ Sbjct: 164 ALETISVCRVNSLLKAIDTLHLNGIKVIASEM-EAETKLYDCQLQEPVAVIMGSEDKGVF 222 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + +D IPM G +S NVSVA+ +ILYEA +QR Sbjct: 223 PALIKASDTLFHIPMAGNFESFNVSVAAGIILYEAMKQR 261 >UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 Length = 259 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWVQVKTHRT 78 + +++V P NV ++RTADA G V A + + + + GS + + Sbjct: 112 WLFLDRVQDPGNVGTMVRTADAAGFAGVVAGDGSADLFSPKVVRSMQGSQFHLALYEG-D 170 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + +K G + T L+ A DFR + ++MG E G+++E L ++ Sbjct: 171 LKKWFEDVKQAGYPVYGTQLNPAAKDFRIVTPQGGFALVMGNEGRGMSEELLKQTTANLY 230 Query: 139 IPMIGMVQSLNVSVASALILYEAQ 162 IPM G +SLNV+V++ ++++E Sbjct: 231 IPMRGQAESLNVAVSAGILMFELA 254 >UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD55_9FIRM Length = 264 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%) Query: 1 MNPTRYARICEMLARRQPDL-------TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 ++P + ML R + + + + P NV I+RTA A G V Sbjct: 93 VSPQGVFGVFMMLDNRTQPVKIGSNGKYLLLSSLQDPGNVGTILRTAAAFGTDGVILSAD 152 Query: 54 GSRMR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 + + A+ G + + ++A L+ G+ + A ++ +V R+I Sbjct: 153 CPDLYAPKVLRASMGGVFRARACVSDDLSASIAALRAAGVPVWAAMPAEGSVSLRDISLH 212 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E GI E AL D + IPM +SLN ++A+ +IL+E R Sbjct: 213 GGGAVVVGNEGGGIAPELAALCDGALTIPMEPGCESLNAAMAAGVILWEMYR 264 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 3/150 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + +E + P N+ IIR + G+ + + + + + GS + Sbjct: 115 IMVLETIQDPGNLGTIIRAGEGAGITGIVMNHDTADIYNPKVIRSTMGSIFRMPFVYADD 174 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + DA +K +G+++ A HL ++ + DYT L+G E G+T+E +LAD + Sbjct: 175 LQDACLLMKNRGVRLFAAHL-KGMNNYDQEDYTDNVGFLIGNEANGLTEETTSLADCLVK 233 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQNA 168 IPM G V+SLN ++A++++++E RQR++ Sbjct: 234 IPMEGKVESLNAAIAASVLMFETARQRRSC 263 >UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria RepID=Q11C30_MESSB Length = 286 Score = 165 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 6/163 (3%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM--A 61 R+ + E+ + + DL V +++V P N+ IIRT DAVG V V + ++ Sbjct: 116 QRWLPLKEVTPKGE-DLWVALDRVRDPGNLGTIIRTVDAVGARGVILVGECTDPFSVETV 174 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR-PTCILMGQ 120 A GS V + +A + ++ THL +VD+R +DY+ P +LMG Sbjct: 175 RATMGSVFSVPLAR-ADEAAFLAWREHFAGLMVGTHL-KGSVDYRNVDYSGGPVLLLMGN 232 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 E+ G+ + D+ + IP G SLN++VA+ ++LYE +R Sbjct: 233 EQQGLPDKLAEACDRLVRIPQAGRADSLNLAVATGVMLYEIRR 275 >UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH5_9CLOT Length = 270 Score = 165 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 9/179 (5%) Query: 1 MNPTRYARICEMLAR-------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 + P +C ML + + +E + P N+ ++RTA+A+G+ V Sbjct: 92 VTPQGIFCVCAMLDKTDCLDKMDASGQLLGLEDIQDPSNLGTVLRTAEALGIGGVILTRG 151 Query: 54 GSRMR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 + + + G+ + + T+ AV L+ +G +A A ++ ++ Sbjct: 152 CCDIYSPKVLRGSMGAVFRLPMALVETMPPAVNALEQKGFVTMAAVPDREAEPITQVLFS 211 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 P+ +L+G E G+ E + + + IPM+G +SLN SVA++L+++E R A + Sbjct: 212 SPSIVLVGNEGNGLKPETIRACQRRVTIPMLGRAESLNASVAASLLMWEMMRASGEAAL 270 >UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax=Leptospira RepID=Q04SA9_LEPBJ Length = 253 Score = 165 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 9/164 (5%) Query: 2 NPTR-----YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 +P R + E L+ + P + ++++ P N+ I+RTA+ GV + S Sbjct: 85 SPFRQQISDKKNLEEYLSEK-PGTFLVLDRIQDPGNLGNILRTAECFGVTNIILPERESA 143 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + ++G+ S++++ T + + + + LK G I++T ++ ++ + Sbjct: 144 GITPVVEKVSSGALSFLKIFTVKNLANTLELLKENGYWIVSTS-DRGTENWSKLPELKEL 202 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 ILMG E G+ + L +D + IP+ G + SLNV+VA+ ++L Sbjct: 203 AILMGNEGEGVKRILLEKSDFVLRIPIHGNLSSLNVTVATGIVL 246 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 2/161 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 N T + + L ++ L + ++Q+H P+N AIIR+ + V + + Sbjct: 74 FNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSLLNVDGIIILDKKQVQVNS 133 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T+ ++GS +++ + +A+ LK G I AT+L+ N+ D + + + +++ Sbjct: 134 TVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQNSTDMTKTQFANKSVVII 193 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 G E+ G+++ +D +I +P + S N SVA ++I + Sbjct: 194 GNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 >UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJH5_9BACT Length = 282 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 8/162 (4%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSW 70 L L V + + P N+ A+IRTA+A G + AAAGS Sbjct: 110 LTHHPAPLFVLADGIQSPGNLGALIRTAEAAGATGILVTVGTVDPFQPKALRAAAGSAFR 169 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA- 129 + + ++ D + L QG++++ + + + D+ +P + +G E G+ Sbjct: 170 LPIIAGSSVADELQKLYRQGVRLVTADIHGD-TPYEAFDWRQPVLLWLGSEGHGLRSLTD 228 Query: 130 ---LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 LA + + IPM G V+SLNV+VA A++LYEA+RQR+ + Sbjct: 229 DFKHRLAARLV-IPMEGQVESLNVAVAGAILLYEARRQRRQS 269 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 82/161 (50%), Gaps = 3/161 (1%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASA 63 + ++ E + ++ + ++++ P N+ IIRTAD+ GV + A+ + Sbjct: 104 FKKKKLSESINKKDK-FVLILDRIQDPGNMGTIIRTADSAGVDAIIALKGCVDIYNPKVI 162 Query: 64 AAGSNSWVQVKTHR-TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + S + + + V LK I++++L+ + +IDY +++G E Sbjct: 163 RSTMGSIFDMNIIDASQDETVDMLKSLDFNIVSSYLNTENF-YDKIDYGSKVALVIGNEA 221 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 GI +E ++ +D + IP+ G +SLN +++SA+++YE ++ Sbjct: 222 NGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYEIKK 262 >UniRef50_C1E8J5 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=C1E8J5_9CHLO Length = 234 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 6/204 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP-GSRMRT 59 ++ R AR+ ++ +R DL +E V+ NV A+ R+ +A+G+ + + G + Sbjct: 28 VSEERIARLDAVVQQRSFDLMPILEGVYDIGNVLAVCRSTEALGIGSLGVISDAGLAFKQ 87 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + G+ W ++ R+ +A+ +K +G ++L T + + D+T PT +++G Sbjct: 88 SGRTSGGAVKWTNLEQWRSTEEAIREVKARGYRVL-TTVFEGGHPLEHYDWTVPTAVILG 146 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E+ G++ EA LAD + I M G +SLNVSVAS++I++ A + R L + L Sbjct: 147 NERDGVSDEAKRLADGGVYISMNGFTESLNVSVASSMIMHHAVQDRTR---RLGSHGNLS 203 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKG 203 E E++ L L ++ G Sbjct: 204 EREKETLRAVYL-ARLVPRYQKHG 226 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 9/172 (5%) Query: 1 MNPTRYARICEMLARR-----QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 + P I + + P V +++ P N+ IIR A+A G V Sbjct: 87 VTPQGVFAIADFKIKNINDLSNPTFIVIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTC 146 Query: 56 RMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + A+AGS ++ V T+ + + G+ ++ T L F +D+T+P Sbjct: 147 NPFSNKALRASAGSIFFLPVIKV-TVKEIEEFVSKYGLNLVITDLKATISSF-NMDFTKP 204 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+ G E G++Q+ A+ IP G +SLNV++A+ ILYE RQR Sbjct: 205 LAIVFGNESKGVSQDLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQR 256 >UniRef50_C7M4Y5 tRNA/rRNA methyltransferase (SpoU) n=13 Tax=Bacteroidetes RepID=C7M4Y5_CAPOD Length = 267 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 4/152 (2%) Query: 18 PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKT 75 L + E KP N+ A++RTADA + V P + + ++ G V + T Sbjct: 116 SPLLLVAEAPEKPGNIGALLRTADAANIDAVIIANPKTDLYNPNIIRSSVGCVFTVPIAT 175 Query: 76 HRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQ 135 T + + LK +G+ L+ + E+ + + I++G E G+T+E L + Q Sbjct: 176 GSTT-EVIDFLKAKGINSYCAALTAF-KPYYEVSFEEASAIVVGTEDQGLTEEWLTHSTQ 233 Query: 136 DIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +IIIPM G++ S+NVSVA+A++++EA+RQR N Sbjct: 234 NIIIPMEGVIDSMNVSVAAAVLIFEAKRQRVN 265 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 8/168 (4%) Query: 1 MNPTRYARICEMLA---RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + P + R+ + + + DL + ++++ P N+ +IIR+A +G + + Sbjct: 78 VEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACLGFSTIILPSRRTVG 137 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 ++ A+G+ V V + A+ LK +G I + ++ + DY+ P Sbjct: 138 LTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYGADMGGQSIV--KTDYSFPAV 195 Query: 116 ILMGQEKTGITQEALALADQDIIIPM-IGMVQSLNVSVASALILYEAQ 162 +++G E TGI ++ DQ + IP G V SLN + A+++I+++ Sbjct: 196 LVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMFDMF 243 >UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E768_MACCJ Length = 246 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 9/165 (5%) Query: 3 PTRYARICEMLARRQPDL--TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 P +C M + +L + ++++ P NV IIRTADA G+ V + Sbjct: 87 PQGIYAVCNMKDGKDAELNRVIYLDRIQDPGNVGTIIRTADAAGLDAVIIAKGTVDIYND 146 Query: 60 -MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + A+ GS + V D I T L + A D++E+ + I++ Sbjct: 147 KVLRASQGSVFHIPVIE----MDFDEVSSKFNGTIYGTSL-EEARDYKEVIPSDNFMIVL 201 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 G E G+ E L+ D+++ IP+ G +SLNV+V + +++Y + Sbjct: 202 GNEGQGVNPEILSATDENLYIPIYGRAESLNVAVCAGILMYHFVK 246 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 TV ++ V P NV IIRTA A G +V + + + G+ + + Sbjct: 101 TVVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISR-TE 159 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + A+ LK G+ ++ T L A E+ + +++G E GI L + DQ + Sbjct: 160 LIPALNELKELGVTVIGTAL-QGAQPLSELPVSENIAVVLGNEGQGIRPATLDICDQRAL 218 Query: 139 IPMIGMVQSLNVSVASALILYEAQR 163 I M +SLNV+VA+ + LY +R Sbjct: 219 IEMS-SFESLNVAVAAGICLYRYRR 242 >UniRef50_UPI0001BC4585 23S rRNA methyltransferase n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4585 Length = 224 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ + P N+ +IR DA G ++ + ++ GS V++ Sbjct: 75 LIVLDDIQDPGNLGTMIRLVDAAGFSDIFLTKHSVDCYNEKVVRSSMGSIFHVRLHVMEK 134 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + +L+ + +L T L ++V + E+ + G E G+++E L LA+Q II Sbjct: 135 -KEILEYLQTENYHVLVTTLQRDSVAYTEMQLKEKNAFVFGNEGHGVSKEFLELAEQKII 193 Query: 139 IPMIGMVQSLNVSVASALILY 159 IP+ G +SLNV++A+ +IL+ Sbjct: 194 IPISGQAESLNVAMAAGIILF 214 >UniRef50_B7C827 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C827_9FIRM Length = 244 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 4/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS--AAAGSNSWVQVKTHRT 78 + ++ V P NV I+RTA + G+ ++ + + + ++ G+ ++ V Sbjct: 99 ILLLDNVQDPGNVGTILRTAHSFGIDCIYMSKGCADIYNPKTIQSSQGALFYIPVIQ-TD 157 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + L+ + +++ AT L D D ++I ++ IL+G E G+ +E + L++ + Sbjct: 158 LVEEIKKLQERNIEVYATALHDKHKDLQDIKPSKKYAILVGNEGQGVRKELIDLSNHIVK 217 Query: 139 IPMIGMVQSLNVSVASALILY 159 I M +SLNV++A+++ +Y Sbjct: 218 IEME-TFESLNVAIATSICMY 237 >UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0C4_9PLAN Length = 272 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 4/160 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAG 66 + + LA ++ L +E V KP N+ AI+R+ADA G+ V + A+ G Sbjct: 113 LQDKLAAKRDLLVAVVEGVEKPGNLGAILRSADAAGIDGVIVCGARLDLYNPNAIRASLG 172 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V T+ A+A L+ Q+LAT + D A+D+ D T I++G E G++ Sbjct: 173 ALFTLPV-IGMTVPQALAWLRMHQFQMLATRV-DGAIDYTTADLRGRTAIILGSEAEGLS 230 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +E L + I +PM+G V SLN+SV +A++ YEA RQR+ Sbjct: 231 REWLGDDIRAISLPMLGTVDSLNLSVTAAILFYEALRQRR 270 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AGJ3 tRNA guanosine-2'-O-methyltransferase n=231 Tax=... 303 2e-81 UniRef50_Q0VRD7 RNA methyltransferase, TrmH family, group 3 n=2 ... 274 1e-72 UniRef50_B5JS83 tRNA (Guanosine-2-O)-methyltransferase n=3 Tax=B... 267 2e-70 UniRef50_Q15Z06 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 267 2e-70 UniRef50_A1U493 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Ga... 265 9e-70 UniRef50_C5BJC4 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ga... 262 4e-69 UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Ber... 262 5e-69 UniRef50_A3IM41 RRNA methylase SpoU n=1 Tax=Cyanothece sp. CCY01... 262 8e-69 UniRef50_Q7TV55 tRNA/rRNA methyltransferase (SpoU) n=34 Tax=cell... 261 2e-68 UniRef50_C7R944 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Ka... 257 3e-67 UniRef50_Q0AB97 tRNA guanosine-2'-O-methyltransferase n=2 Tax=Ec... 253 3e-66 UniRef50_A4SEW2 tRNA guanosine-2'-O-methyltransferase n=10 Tax=C... 249 5e-65 UniRef50_C1XS02 rRNA methylase n=2 Tax=Bacteria RepID=C1XS02_9DEIN 249 7e-65 UniRef50_B3QXG6 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Ch... 245 1e-63 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 232 8e-60 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 231 2e-59 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 228 9e-59 UniRef50_O67577 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ba... 227 2e-58 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 227 2e-58 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 227 2e-58 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 227 2e-58 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 225 7e-58 UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chiti... 225 8e-58 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 225 9e-58 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 225 1e-57 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 224 1e-57 UniRef50_A4BEK2 Putative tRNA methyltransferase n=1 Tax=Reinekea... 223 3e-57 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 222 6e-57 UniRef50_B8IYB0 tRNA guanosine-2'-O-methyltransferase n=14 Tax=D... 222 6e-57 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 222 6e-57 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 222 7e-57 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 222 8e-57 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 221 1e-56 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 221 2e-56 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 220 2e-56 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 220 2e-56 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 220 2e-56 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 220 3e-56 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 220 3e-56 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 220 3e-56 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 220 3e-56 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 219 4e-56 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 219 6e-56 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 219 8e-56 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 219 9e-56 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 218 1e-55 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 218 1e-55 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 218 1e-55 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 218 1e-55 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 217 2e-55 UniRef50_B9L1B3 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Ba... 217 2e-55 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 217 2e-55 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 217 3e-55 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 217 3e-55 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 217 3e-55 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 217 3e-55 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 217 3e-55 UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polar... 217 3e-55 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 216 4e-55 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 216 5e-55 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 215 7e-55 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 215 7e-55 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 215 8e-55 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 215 9e-55 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 215 1e-54 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 215 1e-54 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 215 1e-54 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 215 1e-54 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 214 1e-54 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 214 2e-54 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 214 2e-54 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 214 2e-54 UniRef50_C8WR00 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Bacil... 214 2e-54 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 214 2e-54 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 214 3e-54 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 213 4e-54 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 213 4e-54 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 212 6e-54 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 211 1e-53 UniRef50_C9RX94 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Geoba... 211 1e-53 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 211 2e-53 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 211 2e-53 UniRef50_A6Q996 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 210 2e-53 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 210 2e-53 UniRef50_C4L0U6 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Ba... 210 2e-53 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 210 3e-53 UniRef50_B7DP24 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Alicy... 210 3e-53 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 210 3e-53 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 210 3e-53 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 210 3e-53 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 210 4e-53 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 209 4e-53 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 209 4e-53 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 209 4e-53 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 209 6e-53 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 209 7e-53 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 209 8e-53 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 209 9e-53 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 207 2e-52 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 207 3e-52 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 206 4e-52 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 206 5e-52 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 206 5e-52 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 205 6e-52 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 205 7e-52 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 205 7e-52 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 205 8e-52 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 205 8e-52 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 205 8e-52 UniRef50_D1U4M7 tRNA guanosine-2'-O-methyltransferase n=1 Tax=De... 205 1e-51 UniRef50_Q9LXE4 rRNA methylase-like protein n=11 Tax=Magnoliophy... 205 1e-51 UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1... 204 2e-51 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 204 2e-51 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 204 2e-51 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 204 2e-51 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 203 3e-51 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 203 3e-51 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 203 3e-51 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 203 3e-51 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 203 4e-51 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 203 4e-51 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 203 4e-51 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 203 4e-51 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 203 5e-51 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 203 5e-51 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 202 5e-51 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 202 6e-51 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 202 9e-51 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 202 9e-51 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 201 1e-50 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 201 1e-50 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 201 1e-50 UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsu... 201 1e-50 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 200 3e-50 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 200 4e-50 UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepI... 199 7e-50 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 199 7e-50 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 199 8e-50 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 199 1e-49 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 198 1e-49 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 198 1e-49 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 198 1e-49 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 198 1e-49 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 197 2e-49 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 197 2e-49 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 197 2e-49 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 197 2e-49 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 197 2e-49 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 197 3e-49 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 197 3e-49 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 197 3e-49 UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococ... 197 3e-49 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 197 4e-49 UniRef50_A9S3U1 Predicted protein (Fragment) n=2 Tax=Physcomitre... 196 4e-49 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 196 4e-49 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 196 4e-49 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 196 5e-49 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 196 6e-49 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 196 6e-49 UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casse... 195 6e-49 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 195 7e-49 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 195 7e-49 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 195 8e-49 UniRef50_A7HIF7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaer... 195 1e-48 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 194 1e-48 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 194 1e-48 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 194 2e-48 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 194 2e-48 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 194 2e-48 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 194 3e-48 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 194 3e-48 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 194 3e-48 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 194 3e-48 UniRef50_A5F9W1 tRNA/rRNA methyltransferase (SpoU) n=16 Tax=Bact... 193 3e-48 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 193 4e-48 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 193 5e-48 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 192 6e-48 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 6e-48 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 192 8e-48 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 192 8e-48 UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax... 192 9e-48 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 192 1e-47 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 192 1e-47 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 192 1e-47 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 192 1e-47 UniRef50_D0MG21 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodo... 191 1e-47 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 191 2e-47 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 191 2e-47 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 190 2e-47 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 190 2e-47 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 190 2e-47 UniRef50_Q2S465 RRNA methylase n=1 Tax=Salinibacter ruber DSM 13... 190 3e-47 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 190 3e-47 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 190 3e-47 UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 190 3e-47 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 190 3e-47 UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 190 3e-47 UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostri... 190 4e-47 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 190 4e-47 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 189 5e-47 UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verru... 189 6e-47 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 189 6e-47 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 189 7e-47 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 189 7e-47 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 189 7e-47 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 189 9e-47 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 189 9e-47 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 189 1e-46 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 188 1e-46 UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selen... 188 1e-46 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 188 1e-46 UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerot... 188 1e-46 UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococc... 188 1e-46 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 188 1e-46 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 188 1e-46 UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacte... 188 2e-46 UniRef50_B7C827 Putative uncharacterized protein n=1 Tax=Eubacte... 187 2e-46 UniRef50_Q112U6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Oscil... 187 2e-46 UniRef50_Q6MNP1 Putative RNA methylase n=1 Tax=Bdellovibrio bact... 187 2e-46 UniRef50_B3RWG3 Putative uncharacterized protein n=1 Tax=Trichop... 187 2e-46 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 187 3e-46 UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0... 187 3e-46 UniRef50_B0MYM4 Putative uncharacterized protein n=1 Tax=Alistip... 187 3e-46 UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Myc... 187 3e-46 UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacte... 187 3e-46 UniRef50_Q038C4 rRNA methylase n=8 Tax=Lactobacillus RepID=Q038C... 186 4e-46 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 186 4e-46 UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus A... 186 5e-46 UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacill... 186 6e-46 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 186 6e-46 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 185 8e-46 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 185 9e-46 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 185 9e-46 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 185 1e-45 UniRef50_C6VPS4 rRNA methylase n=8 Tax=Lactobacillales RepID=C6V... 185 1e-45 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 185 1e-45 UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2... 184 2e-45 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 184 2e-45 UniRef50_C1E8J5 Predicted protein (Fragment) n=3 Tax=Mamiellales... 184 2e-45 UniRef50_D2EID2 TrmH family RNA methyltransferase n=1 Tax=Pedioc... 184 2e-45 UniRef50_UPI0001BC4585 23S rRNA methyltransferase n=1 Tax=Fusoba... 184 3e-45 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 184 3e-45 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 184 3e-45 UniRef50_A5US41 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 183 4e-45 UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium ther... 183 4e-45 UniRef50_Q7MW92 RNA methyltransferase, TrmH family n=2 Tax=Porph... 183 4e-45 UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 183 4e-45 UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Ta... 183 5e-45 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 182 6e-45 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 182 6e-45 Sequences not found previously or not previously below threshold: >UniRef50_P0AGJ3 tRNA guanosine-2'-O-methyltransferase n=231 Tax=Bacteria RepID=TRMH_ECO57 Length = 229 Score = 303 bits (778), Expect = 2e-81, Method: Composition-based stats. Identities = 229/229 (100%), Positives = 229/229 (100%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM Sbjct: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ Sbjct: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE Sbjct: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG Sbjct: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 >UniRef50_Q0VRD7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VRD7_ALCBS Length = 230 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 2/228 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P RY RIC+ L RRQPDLTV M+ VHKPHN++AI+RT DAVG+ +VHAV P +R R Sbjct: 1 MTPERYRRICDTLDRRQPDLTVIMDGVHKPHNIAAIVRTCDAVGILDVHAVLPKNRARMA 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A A GS WVQV D + L+GQG+Q+LA HLSD+A+++R++DYTRPT +L+G Sbjct: 61 AGTAMGSQRWVQVHKRDESTDVIRELQGQGVQVLAAHLSDDAIEYRQVDYTRPTALLLGT 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ E + DQ++ IPM+GMV+S NVSVA+A+IL EA QR+ G Y + + Sbjct: 121 EKFGVSDEVASAVDQNVTIPMMGMVESFNVSVAAAIILSEACEQRRAKGFY--DQPRVAA 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAA 228 A LLF GY +A++ G+PYP ++++G+++ A A +Q Sbjct: 179 ARYHELLFRWGYARIARLCDAHGVPYPELDEEGQVKDSAALTALLQKT 226 >UniRef50_B5JS83 tRNA (Guanosine-2-O)-methyltransferase n=3 Tax=Bacteria RepID=B5JS83_9GAMM Length = 225 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 114/216 (52%), Positives = 148/216 (68%), Gaps = 2/216 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+P R+ R + L RRQ LTV ME VHKPHN SAI+R+ +AVGVH HAV+P + Sbjct: 1 MSPERHQRFIDTLKRRQTSLTVVMENVHKPHNFSAIVRSCEAVGVHRAHAVYPEGGIGNN 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G++ WVQV THR I LK QG Q+L HL + AVDFRE+DYT+PT ++MG Sbjct: 61 AGTTVGAHKWVQVDTHRNIQTPFQQLKAQGFQLLTAHLDETAVDFREVDYTQPTAVVMGS 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E GI++EA LAD I+IPM+G+ +SLNVSVA+ALIL+EAQRQRQ AGMY E L E Sbjct: 121 ELHGISEEAAQLADHSIVIPMLGLTESLNVSVATALILFEAQRQRQLAGMY--EQPELDE 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 A ++ L+FE YP LA+ + +G PYP ++ +G + Sbjct: 179 ATRKTLMFEWAYPDLARRYQSRGEPYPELDDEGYLV 214 >UniRef50_Q15Z06 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z06_PSEA6 Length = 256 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 133/229 (58%), Positives = 175/229 (76%), Gaps = 3/229 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+ RY RI ++L+ RQP LTVC+EQVHKPHNVSA++R+ DAVG++ +H VW + Sbjct: 7 MSVERYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAVLRSCDAVGINRIHGVWDQK-TKIR 65 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS WV+ + H +IGDAV+ LK Q MQ+L THLSD++VDFR+IDYT+PT I++GQ Sbjct: 66 KGTAMGSEHWVKTEMHTSIGDAVSVLKQQNMQVLVTHLSDDSVDFRDIDYTQPTAIILGQ 125 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G T+EA+A+AD++I+IPM+GMVQSLNVSVA+A++LYEAQRQR+ AGMY + L E Sbjct: 126 EKHGATEEAIAVADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREVAGMY--NSLQLSE 183 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG 229 E QR+LFEGG+PVL+ V + KGL YPH+++ G I ADA WW MQ Sbjct: 184 EECQRVLFEGGFPVLSNVCRNKGLDYPHIDEGGNIVADASWWQKMQTTA 232 >UniRef50_A1U493 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Gammaproteobacteria RepID=A1U493_MARAV Length = 244 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 139/227 (61%), Gaps = 3/227 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R ARI ++L RQPDL V +QVHKP N+SAIIR+ DA G+ +H VWP R Sbjct: 1 MTPERLARIKQVLNTRQPDLRVLTDQVHKPRNLSAIIRSCDAFGLANMHVVWPKEGFRAF 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS WV TH T+ +AV LK QG ++ A LSD AVDFRE+DYT P I+MG Sbjct: 61 RKTAGGSFHWVTTHTHPTMDNAVTELKAQGHKLYAAQLSDRAVDFREVDYTVPCTIIMGN 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G+ AD+ I+IPM+GMV+SLNVS A ++IL EAQRQR+ AGM+ + +P+ Sbjct: 121 EVDGVNPVTAEQADEHIVIPMMGMVESLNVSSACSIILSEAQRQRKLAGMF--DQRRMPD 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQ-GEIEADADWWATMQ 226 E RLLF P + + + LPYP ++ + GE+ W ++ Sbjct: 179 DEYNRLLFCWCQPTVKRYCDDRNLPYPPIDHETGELIDGVGWMQEVR 225 >UniRef50_C5BJC4 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Gammaproteobacteria RepID=C5BJC4_TERTT Length = 228 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 142/227 (62%), Gaps = 2/227 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R+ RI +L +RQPDLTV ++VHK N+SAI RT DAVG+ +H V P +T Sbjct: 1 MTPERFQRITSVLNKRQPDLTVITDEVHKGRNLSAITRTCDAVGIDTIHCVMPEDGYQTY 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A + WV V+ H +I V LK +G Q++A +L DN +D+R +DYT+PT +++G Sbjct: 61 NGTSASAEKWVAVQHHSSISAPVNDLKREGFQLVAANLGDNTLDYRNVDYTKPTALVLGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G++ EA A D ++ +PM+GMV+S NVSVA+A+IL EAQ QRQ AG+Y + L Sbjct: 121 EVKGVSPEAAAAVDYNVTVPMVGMVESFNVSVAAAIILMEAQHQRQQAGLY--DQPRLTA 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQA 227 + F +PVLAK G+ YP V + GE++ + W++ QA Sbjct: 179 DVYRARFFHWAHPVLAKWCDDNGVEYPPVREDGEVKNLSAWYSAEQA 225 >UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N3Z0_9GAMM Length = 229 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 104/224 (46%), Positives = 138/224 (61%), Gaps = 2/224 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M P R R+ ++L +RQPDLT+ + V KPHN+SAIIR+ DA V+E++ VWP +T Sbjct: 1 MTPERVQRMHDILRKRQPDLTLITDAVFKPHNLSAIIRSCDAFAVNELNVVWPYDDYQTF 60 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS +V VKTH+ + A+ K QG QI+A H D AV +IDYT+PT I+MG Sbjct: 61 RGRAMGSQQYVNVKTHKDVSQAIQGFKQQGYQIVAAHFCDQAVPHYDIDYTKPTAIVMGA 120 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ +A+ L D II+PM GMVQSLNVSVA+ALIL EA QR+N GM + L Sbjct: 121 EKNGVSAKAMDLVDHSIIVPMEGMVQSLNVSVAAALILSEAMHQRKNKGML--GENQLDS 178 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWAT 224 Q FE YP LAK K+ G+ YP + + G+ A + Sbjct: 179 ETYQIQFFEWCYPDLAKRCKKLGMAYPKLKENGDFVEPAAFSKE 222 >UniRef50_A3IM41 RRNA methylase SpoU n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IM41_9CHRO Length = 220 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 106/216 (49%), Positives = 143/216 (66%), Gaps = 2/216 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P RY RI ++L +RQPDLT+ E VHKPHN+SAIIRT DAVG+ +VH + T Sbjct: 3 LLPRRYHRIRQVLEKRQPDLTILTEDVHKPHNLSAIIRTCDAVGILDVHCINTTDEFPTF 62 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 + + GS+ WV + +H I + HLK Q I A H +D ++D+REIDYT+PT IL+G Sbjct: 63 SQVSQGSDKWVFLHSHPNIKTGINHLKRQNFNIYAAHFTDQSLDYREIDYTQPTAILLGA 122 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G+++EA L D II+PM+GMVQSLNVSVA+A+IL+EAQRQR MY + S L Sbjct: 123 EKWGVSEEAANLVDGHIIVPMLGMVQSLNVSVAAAVILFEAQRQRLAQKMY--DTSRLDL 180 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 ++LFE YP LA + ++KG YP + + G I Sbjct: 181 DRYHKILFEWSYPALATIYQKKGENYPSLGKNGVIL 216 >UniRef50_Q7TV55 tRNA/rRNA methyltransferase (SpoU) n=34 Tax=cellular organisms RepID=Q7TV55_PROMM Length = 245 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 137/218 (62%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R+ R+ +L R DLTV +E V KPHN+SAI+R+ DAVGV E HAV R+ T Sbjct: 19 LLPRRFDRLKAVLDCRMADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAVNYSGRLPTF 78 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 S A GS W+ +K H +I AV +K G ++ THL NA D+R+ D+ PT ++G Sbjct: 79 NSTAQGSQKWIPLKEHSSIEVAVKAIKDSGFRLYGTHLGGNARDYRDCDFCEPTAFVLGA 138 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G+++ A L D+ I IPM GMVQSLNVSVA+A +L+EA RQR+ AG+ + L Sbjct: 139 EKWGLSKLATPLMDEGIFIPMSGMVQSLNVSVAAATLLFEALRQRRLAGIAPQAGEGLEP 198 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD 218 A Q+ LFE YP +A +++G YP +N QGEI+ Sbjct: 199 ALYQQRLFEWAYPEVAAWCQQEGKSYPALNDQGEIQGS 236 >UniRef50_C7R944 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R944_KANKD Length = 231 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 110/220 (50%), Positives = 151/220 (68%), Gaps = 3/220 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA 61 +P R +I +L+ RQPDLTV M+QVHKPHN++AI+RTADAVG+ VHAV+P T Sbjct: 5 SPARLQKILTLLSNRQPDLTVFMDQVHKPHNLAAIVRTADAVGIGHVHAVFPEDVKFTGH 64 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 ++GS WV H + +A +K +GMQ+LA H SD AVDFR IDYT+PTC+L+G E Sbjct: 65 HTSSGSKRWVTTHKHSNLKSGIAEMKAKGMQVLAAHFSDTAVDFRTIDYTQPTCLLVGSE 124 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181 G++ EA +ADQ +IIPM+GMVQSLNVSVA+ALILYEAQRQR +A MY +P+A Sbjct: 125 LVGVSDEAAEIADQHVIIPMVGMVQSLNVSVATALILYEAQRQRSDAEMY--GECKIPQA 182 Query: 182 EQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADW 221 E + F+ +P + + + + YP +++ G+I D +W Sbjct: 183 EVDEICFKALHPTITRFCDKHKIRYPKMDEFGDI-DDPEW 221 >UniRef50_Q0AB97 tRNA guanosine-2'-O-methyltransferase n=2 Tax=Ectothiorhodospiraceae RepID=Q0AB97_ALHEH Length = 220 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 106/217 (48%), Positives = 148/217 (68%), Gaps = 4/217 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M R R+ + L RRQPDL V ++QVHKPHN+SAI+RT DAVGV HAV T+ Sbjct: 1 MTARRLHRMRQTLERRQPDLQVLLDQVHKPHNLSAILRTCDAVGVPRAHAVSRHQD-FTV 59 Query: 61 ASA-AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 A ++G+ WV V+TH + AV ++GQGM++ A HLS+ AVD+R++DYT+P C+L+G Sbjct: 60 HRAASSGTGQWVAVETHADLPAAVRAVQGQGMKVYAAHLSEQAVDYRQVDYTKPCCLLLG 119 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 EK G+++E ALAD +IIPM G+ SLNVSVA+A+IL+EAQRQR AG Y E + Sbjct: 120 AEKEGVSEEGAALADGHVIIPMFGLGASLNVSVAAAVILFEAQRQRLAAGQY--ETPRMA 177 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 EAE R L E +P +A+ +++G PYP +++ G + Sbjct: 178 EAEITRTLVEWLHPRIAERCRKEGRPYPALDEDGGVI 214 >UniRef50_A4SEW2 tRNA guanosine-2'-O-methyltransferase n=10 Tax=Chlorobiaceae RepID=A4SEW2_PROVI Length = 232 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 2/216 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R+ RI +MLA RQPDLTV M+ V+KPHN+SAIIR+ DAVG+H+++AV + T Sbjct: 2 IAPERFLRIKKMLASRQPDLTVVMDNVNKPHNLSAIIRSCDAVGIHDLYAVSSKKSIHTT 61 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +AAAG+ W + + IG L +GMQ+LA ++ + DFR ID+T PT I++G Sbjct: 62 QNAAAGAGRWTNLHLRKDIGTLCRKLGMEGMQVLAATNTEESRDFRTIDFTLPTAIVLGA 121 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E G++ EA+ AD I IPM GMV+SLNVSVA+ALIL+EA+RQR GMY L E Sbjct: 122 EWEGVSAEAIQAADMAITIPMYGMVESLNVSVAAALILFEAERQRSLKGMY--RTRRLEE 179 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 + ++LLFE YP L++ + KG YP +++ G I Sbjct: 180 SLYRKLLFELSYPRLSRQLREKGGAYPELDEDGGIV 215 >UniRef50_C1XS02 rRNA methylase n=2 Tax=Bacteria RepID=C1XS02_9DEIN Length = 228 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 149/224 (66%), Gaps = 10/224 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV--------W 52 M P R+ +I ++LARRQPDLTV ME+VHK HN SA++R+ DAVGV E H + Sbjct: 1 MTPERWQKIQQVLARRQPDLTVLMERVHKWHNFSAVLRSCDAVGVLEAHLIPAAHGIPTE 60 Query: 53 PGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + R A+ + + WV ++T+ A A L+ +G I A H S A+D+RE+DYTR Sbjct: 61 DQNPSRHTAATSGSAAKWVGLRTYPDTPSAFADLRSRGFVIYAAHFSHKAIDYREVDYTR 120 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 PTCIL+G EK G+T+EA LAD I+IPM+GMVQSLNVSVA+A+IL+EAQRQR AGMY Sbjct: 121 PTCILLGTEKWGVTEEAATLADGHIVIPMMGMVQSLNVSVAAAVILFEAQRQRIQAGMY- 179 Query: 173 RENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 + L A QRLLFE YP A+ +++G YP ++ +GEI Sbjct: 180 -DRPRLEPALHQRLLFEWAYPDWAERCRKEGRDYPALSPEGEIL 222 >UniRef50_B3QXG6 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXG6_CHLT3 Length = 219 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 102/216 (47%), Positives = 144/216 (66%), Gaps = 2/216 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ R+ +I +L +RQPDLTV ME V+K HN++AIIRT DAVG+ +VHAV +RT Sbjct: 4 VSSDRFQQIKRLLDKRQPDLTVVMENVNKAHNLAAIIRTCDAVGIPKVHAVALRPEIRTK 63 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++A+G+N WV V+ H + D + L+ G QI H S A DFR +D+T+PT +++G Sbjct: 64 QNSASGANRWVDVQIHNSTEDVFSTLRQGGFQIFVAHFSPQATDFRAVDFTKPTALVVGA 123 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E GI++ A++LAD + +PM+GMV+SLNVSVA+A++L+EAQRQR G Y + L E Sbjct: 124 EWEGISETAISLADGSLYVPMVGMVESLNVSVATAIMLFEAQRQRTEKGFY--DKPRLDE 181 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIE 216 A QRLLFE YP +A K+K P +N GEI Sbjct: 182 ATYQRLLFELTYPQIATAYKQKDKALPKMNMDGEIL 217 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 7/173 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P +Y+ + ++L R + V +++V PHN+ +I+RTA+ GVH + S Sbjct: 129 VTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFGVHGIILPKRRSA 188 Query: 57 MR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+ ++ G+ V++ + + LK +G+ I + + ++D+ P Sbjct: 189 SVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEEYSY-QVDFGGPC 247 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E GI++ + D+ I IPM+G + SLN SVA +I+YE + R Sbjct: 248 AVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKGRLK 300 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 5/166 (3%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRT 59 N +Y + +++ ++ V ++Q+ PHN AI+RT+ A GV + + Sbjct: 74 NDFKYENL-DIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVDAIIIPKDNAVEVTPV 132 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + ++G + + + + + LK + + + + + EID+ C++ G Sbjct: 133 VIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEG--KPYYEIDWQGKICLVFG 190 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E GI + D+ + IPM V+SLNVSV+S +IL+EA++QR Sbjct: 191 NEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 7/169 (4%) Query: 4 TRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 +Y + ++L +++ + ++++ PHN+ AIIR+A+A GVH + + Sbjct: 77 YKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVN 136 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+ +AG+ +++ I + + LK +G+ I+ T ++ F E++Y P + Sbjct: 137 ATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAE-KSFEELNYDFPVAFV 195 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +G E G+++ L D + IPM G + SLN SVA+++++Y+ +R+ Sbjct: 196 IGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRK 244 >UniRef50_O67577 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Bacteria RepID=TRMH_AQUAE Length = 211 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 7/204 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R R+ E+L +RQ DL V + V HN SAI+RT DAVGV ++ + + + Sbjct: 7 VLEKRLKRLREVLEKRQKDLIVFADNVKNEHNFSAIVRTCDAVGV--LYLYYYHAEGKKA 64 Query: 61 A---SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 GS+ WV ++ + K +G QI+AT LS +V+FRE+DYT+PT ++ Sbjct: 65 KINEGITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLV 124 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 +G E G++ E + +AD+ I+IPM GM QSLNVSVA+ +ILYEAQRQR+ GMY R Sbjct: 125 VGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKGMYSR--PS 182 Query: 178 LPEAEQQRLLFEGGYPVLAKVAKR 201 L E E Q++L + Y + K KR Sbjct: 183 LSEEEIQKILKKWAYEDVIKERKR 206 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 4/165 (2%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMA 61 T I E+ + L + ++ + PHN+ +I+RTADA V V S ++ Sbjct: 95 TDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNVCGVIIPKHRSVGVTPVVS 154 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 + G+ + + + + LK +G I T ++ D + +++G E Sbjct: 155 KTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNGTPSDCWNTN--GKLALVIGNE 212 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 GI+ D+ I IPM G VQSLN SVA+A+++YE R R+ Sbjct: 213 GKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRR 257 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS- 55 M Y+ + EM+ + + ++++ PHN+ +IIRTA+ G H V + Sbjct: 72 MPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVAGCHGVIIPKHRAC 131 Query: 56 -RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T +AG+ +++ I + +LK + I + + + + P Sbjct: 132 EVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWIYGA-CGEASQTHTQANLKGPI 190 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E GI++ DQ I IPM G +SLN S A+++++YE RQR Sbjct: 191 GLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQR 241 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P Y + +++ + + + + ++ + PHN+ AIIRTA+A G + Sbjct: 195 VAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFGAQGMVLPQRRVA 254 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+ AAG+ V + A+ LK G I T ++ + D P Sbjct: 255 GITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGT-VAGKQTALHQADLREPM 313 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E G++ D I IP+ G SLN SVA+A+ LYE RQR Sbjct: 314 GLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQR 364 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 8/171 (4%) Query: 4 TRYARICEMLAR-----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 YA + ++L + +P + ++ + P N+ AIIRTA+ GV + S Sbjct: 75 YPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRTAECAGVDGIIIPSHKSAEV 134 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T++ +AG+ + + + + + +LK +G +L + PT + Sbjct: 135 NPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGADAKAR-QSYFNTSIPSPTAL 193 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 ++G E GI + D + IPM G + SLN SVA+AL++YE RQR N Sbjct: 194 VIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVLRQRLN 244 >UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PC85_CHIPD Length = 197 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 115/196 (58%), Gaps = 4/196 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 M P R R+ +L +RQ LTV +E V PHN+SA++RT DAVG+ +V+ + + R Sbjct: 1 MTPERRERLLSVLNKRQAGLTVVLENVFDPHNISAVLRTCDAVGIQDVYVLNTTTARRKR 60 Query: 60 -MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 +++ + W+ V +A ++ + +I THL+ +A E+D+T ++ Sbjct: 61 WGHKSSSSAAKWLTVHQFSDTATCMAVVREKYDKIYTTHLAADAKSLYELDFTGSVALVF 120 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E+ G+++E L D + IIP +G+++SLN+SVA A+ +YEA RQ+ AG Y ++N L Sbjct: 121 GNEQEGVSEEIRKLCDGNFIIPQVGIIKSLNISVACAVSIYEAMRQKSIAGHYEQKN--L 178 Query: 179 PEAEQQRLLFEGGYPV 194 P+A+ LL E G+ Sbjct: 179 PDAQYNALLEEWGFQE 194 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 7/179 (3%) Query: 2 NPTRYARICEMLARRQ----PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 P +Y + +++ R + + V ++ + PHN+ AI R+ +A G+ + + Sbjct: 178 TPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRRAAG 237 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ AAG+ S + V + A+ +LK QG + T S A D+ RP Sbjct: 238 VTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTT-SRGADPIYSADFQRPIA 296 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRE 174 +++G E GI+ DQ + IP+ G +SLN SVA+ + LYE RQR + E Sbjct: 297 LVVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQRSPHHLKRPE 355 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 7/176 (3%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + + ++ V ++ + PHN+ +I+RTADA GV V S Sbjct: 73 IAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G + +DNA D+R++ P Sbjct: 133 ALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R G Sbjct: 192 AIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQVGD 247 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAA 65 + ++LA+ L + ++ V PHN+ A +R ADA GV V S T++ A Sbjct: 85 DLDDILAKHASPLLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVAC 144 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V + + + HL+ QG+ I+ T + D + T I+MG E G+ Sbjct: 145 GAAETVPLVRVTNLARTMRHLQEQGIWIVGTA-GEATHDIYQAKLTGSLAIVMGAEGDGM 203 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 + D I IPM G V SLNVSVAS + L+EA RQR + Sbjct: 204 RRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQRLAS 246 >UniRef50_A4BEK2 Putative tRNA methyltransferase n=1 Tax=Reinekea blandensis MED297 RepID=A4BEK2_9GAMM Length = 224 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 127/218 (58%), Gaps = 6/218 (2%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAA 64 RY + ++L +RQ D+T+ ++VHK NVSAI+RTAD+VG+ VH V P A Sbjct: 5 RYLKFQQVLNQRQNDMTILTDKVHKSQNVSAIMRTADSVGIPTVHMVKPERGRLVYHHTA 64 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 G++ +V V + T+ + + L+ GM + A H SD A+ +RE DYTRP +++G EK G Sbjct: 65 GGASRFVDVIVYETLSEGIQSLRNAGMALYAAHWSDRAISYREADYTRPFALILGAEKYG 124 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE-- 182 I+ EA AD+ +IIPM+G +SLNVSVAS +IL EA QR Y + LP+ + Sbjct: 125 ISPEAADAADEHLIIPMVGACESLNVSVASGIILQEAMHQRMAQQAYTQ----LPDQDST 180 Query: 183 QQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADAD 220 LF +P +A + LPYP +++ G++ Sbjct: 181 YHNTLFRWLHPKMAAFCDARQLPYPQLDEDGDMIPPQG 218 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 222 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 4/160 (2%) Query: 9 ICEMLAR-RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + ++L +P L + ++ + PHN+ A +RTADA+GVH V A S T++ A Sbjct: 85 LEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVAC 144 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V T + + LK G+ I+ T +S + D + +MG E G+ Sbjct: 145 GAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES-DLYHCNLPDSAAWVMGNEGDGM 203 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D + IPM G V+S+NVSV++ ++L E +RQR Sbjct: 204 RRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_B8IYB0 tRNA guanosine-2'-O-methyltransferase n=14 Tax=Desulfovibrionales RepID=B8IYB0_DESDA Length = 250 Score = 222 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM- 60 R AR+ E+LA RQPDLT+ + +H PHNVSAI R+ DA GV V+ + + + Sbjct: 60 TERRKARLLEVLAHRQPDLTLVLANIHDPHNVSAIYRSCDAFGVSRVNLYYTNTPFPALG 119 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 +A + WV+ H+ + L+GQ MQ+LAT S A R+ D+TRPT ++MG Sbjct: 120 RKTSASARKWVESARHKDSAALMESLRGQNMQVLATSCSPTARPLRDWDFTRPTAVIMGN 179 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E +G+ E L +AD ++ IPM GM+QS NVSVA+A+IL EA RQR+ AGMY + Sbjct: 180 EHSGVEPELLQMADGELYIPMYGMIQSFNVSVAAAIILSEAARQREAAGMY--ATPRMAA 237 Query: 181 AEQQRLLFEGG 191 A + L E Sbjct: 238 AALEEKLQEWL 248 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 2/168 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 + +Y + E++ + +L V +Q+ PHN+ AI+RT DA GV V S Sbjct: 69 IQDYKYHSLQEIIKGAKNNLIVLCDQLEDPHNLGAILRTCDACGVDGVVVGKHRSVGLTS 128 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T+A + G+ + V+V + A+A LK G ++A + +AVD+ E + P +++ Sbjct: 129 TVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDAVDYTEFNVDMPLVLVV 188 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G E GI++ D IPM G V SLNVSVA+ ++L++ R+R+ Sbjct: 189 GSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRRK 236 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 6/170 (3%) Query: 1 MNPTRYARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 + P YA + E+L+ R+ L + ++ V N+ AI+RTA+ G V S Sbjct: 115 LKPYAYADLEEVLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPV 174 Query: 59 TMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T A A+G+ +++ V I + LK +G + + D + D P I Sbjct: 175 TAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGG--DLYQADLKGPLVI 232 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +MG E GI+ + D + IPM G V SLNVSVA+AL++YEA RQR Sbjct: 233 VMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQRN 282 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 7/175 (4%) Query: 1 MNPTRYARICEMLARRQPD----LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + L +++ + ++ + PHN+ +I+RTADA GV V S Sbjct: 73 IAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSV 132 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G + T + NA D+R ++ Sbjct: 133 TLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEAN-NATDYRNLEADMSL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R + G Sbjct: 192 AIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKRHDVG 246 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 4/168 (2%) Query: 3 PTRYARICEMLAR-RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRT 59 A + + L L + ++ V PHN+ A +RT DA GV + S T Sbjct: 81 EQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDAAGVKGLVVTKDQSVGLTPT 140 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 +A A+G+ V V + + K +G ++ + E+D P ++MG Sbjct: 141 VAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGAA-GEAERTLYELDLRLPLVVVMG 199 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 E G+ + D + IPM+G V+SLN+SVA+ ++LYE RQR Sbjct: 200 AEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRSR 247 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 7/170 (4%) Query: 1 MNPTRYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG-- 54 + P Y + E+L + +P + ++ + PHN+ A++RTA+ G H V Sbjct: 79 VAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGAHGVIIPKRRGG 138 Query: 55 SRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + T+A A+AG+ +V + + V LK G+ I+ + + + D+ P Sbjct: 139 AITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDA-PRPYFRQDFRGPV 197 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 +++G E GI+ D + IPM G V SLN SVA AL++YE RQ Sbjct: 198 GLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 7/169 (4%) Query: 5 RYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 Y + ++L + + + ++ + +N+ +I+RTADAVG H V + Sbjct: 110 DYVEVDDILKIAQDKGEDPYIIILDGITDAYNLGSILRTADAVGAHGVVIPKRRAIGLNA 169 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++ A+AG+ +V V I + +LK + + I+ T LS F E D P +++ Sbjct: 170 AVSKASAGAIEYVPVARVTNISQTIEYLKKKNIWIVGTDLSGE-KPFFEADLKGPVALVI 228 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 G E G+ + D + IPM G + SLN +VA+A+I+YE +RQR Sbjct: 229 GSEGEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQRNF 277 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 + +L + L + ++ V PHN+ AI+RTAD GV V A S T+ + G Sbjct: 35 LDGILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRVSVG 94 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + V + + L+ +G+ I T E D+T P ++MG E G+ Sbjct: 95 AAEKVPFIQVTNLARTMKQLQSRGIWIFGTS-DKGDRGLYETDFTGPAALVMGAEGEGMR 153 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D + IPM G + LNVSVA+ + LYE RQR Sbjct: 154 RLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQR 192 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 7/173 (4%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA E L +++ + ++ + PHN+ +I+RTADA GV V S Sbjct: 73 VAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSV 132 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +T+A A+ G+ V V + + LK G I T + NA D+R++ Sbjct: 133 ALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEAN-NATDYRDLQADMSL 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 I++G E G+++ D I IPM+G V SLN SVA++L++YE R+R Sbjct: 192 GIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVYRKRHQ 244 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 4/164 (2%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMAS 62 + ++ + L + + L + ++ + PHN+ +I+R+ADA GV V + +A Sbjct: 92 DFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADATGVSGVIIPKRRASGLTSVVAK 151 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + G+ V V + LK +G I T + + D+R+ + T +++G E Sbjct: 152 TSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAMEGD--DYRKWNANGKTVLVIGNEG 209 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 GI+ L DQ + IPMIG VQSLN SVA+ ++LY+A R Sbjct: 210 KGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFNSRH 253 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 2/162 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM--ASA 63 + + +++ + + L V ++ V PHN+ AI+R+A+A G V + A Sbjct: 83 WDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEAFGALAVILPKDRTAPLNAGAIKA 142 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ + + + A+ L+ + + ++ A +D P ++MG E + Sbjct: 143 SAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEAGAPLIGTLDCKGPLALVMGNEGS 202 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G+ + DQ IPM G V SLNVSVA+ + LYE RQR Sbjct: 203 GLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQR 244 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 3 PTRYARICEML-----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 P +Y+++ +L ++P + ++ + P N AIIRTADAVGV V S Sbjct: 77 PFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAVGVDGVIIPKRRSVD 136 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ A++G+ V + + ++ LK Q + IL T + + E +Y P Sbjct: 137 VNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGD-RGIFEENYNIPLA 195 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E +G++ D IPMIG V SLN SVA+A++LYE RQ+ N Sbjct: 196 LVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQKTN 247 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 7/169 (4%) Query: 1 MNPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + Y + +L + ++ L V ++++ PHN+ AIIR++ A G V S Sbjct: 75 LKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAAGADGVIITEKASVE 134 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + + G + + + + LK +G A + + + +T Sbjct: 135 VTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATMEGE--PYYSVSFTDKAA 192 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++ G E GI +D + IPM + SLNV+ ++A++L+E +RQ Sbjct: 193 LIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRRQ 241 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 219 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 ++P I + + + ++QV PHN+ AIIRTA A G H + S Sbjct: 78 VSPREMVEIAR--EKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHGLIYPRKRSADITP 135 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + A+AG+ + + + I +A LK G+ I T + + DY P +++ Sbjct: 136 VVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRG-TRPYYSADYKGPVGLVI 194 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 G E G+ + D + IPM G + SLN SVA+ ++++E RQR++ Sbjct: 195 GNEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRS 243 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 7/175 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P Y + E++A R + L + ++ + P N+ A++RTADA GVH + S Sbjct: 97 VAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGVHGILLPRRHSV 156 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ +V V I + LK QG I + + + + T Sbjct: 157 PLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEI-YDRANLTGAL 215 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +++G E G+++ L D + +PM+G + SLN SVA A+++YEAQRQR+ Sbjct: 216 VLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQRRAKA 270 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 6/176 (3%) Query: 2 NPTRYARICEMLARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--R 56 P Y + +++ + + + V + + PHN+ AIIRTA+A+G + + Sbjct: 179 APYGYIELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIPQRRASGI 238 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ AAG+ V + A+ LK G I T S + +++ P + Sbjct: 239 TSTVMKVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAASG-SEPVHTVNFKGPIVL 297 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 ++G E G+ D + IP+ G SLN SVA+ + LYE RQR +YL Sbjct: 298 VIGSEGEGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQRSLNTLYL 353 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 3/170 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMAS 62 + + L R + + + + PHN+ A+IR+A+A G + + T+A Sbjct: 169 EFEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAK 228 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 AAG+ + + + A+ LK G Q++ T + E+ P +++G E Sbjct: 229 VAAGAVEHLPIARVTNLNQAIERLKEAGYQVVGT-QEKASQALYELKLDGPLVVVVGSEG 287 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 GI+ D + IP+ G SLN SVA ++LYE RQR+ + L Sbjct: 288 KGISLLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMRQRRANQIDL 337 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 7/175 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + YA + ++ + + + ++++ PHN+ +I+RTADAVG H + + Sbjct: 75 VAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAV 134 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A A+ G+ + V + + +K +G+ ++ T S DFR +D P Sbjct: 135 GLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARE-DFRNMDGNMPL 193 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +++G E G+ + D I +PM G V SLN SVA+ L++YE R+R G Sbjct: 194 ALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVG 248 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 6/171 (3%) Query: 1 MNPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + RY I E++ + L + ++ + PHN+ AI+RT DA+GV V S Sbjct: 73 IEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIGVDGVIIGKNRSVG 132 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A + G+ V+V + + LK + ++ L D + D+R++DY P Sbjct: 133 LNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDL-DKSQDYRQVDYNMPLV 191 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I++G E GI++ D ++++PM+G V SLN SVA+A+ILY+ R Sbjct: 192 IVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYNSRN 242 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Query: 3 PTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVH--AVWPGSR 56 +Y I ++L + + V ++++ PHN +IIR+A G H + A Sbjct: 74 EYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHGIITEARNSCPI 133 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ A+AG+ ++V + + LK +G+ + A + + D+ P CI Sbjct: 134 TPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAE-KFVYDCDFKIPICI 192 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 ++G E GI++ AD + IP G + S N SVA+ +I +E +QR G Sbjct: 193 IIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQRMQEG 245 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 6/186 (3%) Query: 5 RYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 Y + +++ ++ + V ++ + PHN+ A+IR+AD GV V + T Sbjct: 77 EYLDLDDIIEKKRGEHAFVVVLDGIEDPHNLGALIRSADGAGVDGVVIPERRAVGVTGTA 136 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQ-GMQILATHLSDNAVDFREIDYTRPTCILMG 119 A+AG+ +V + I ++ LK + + + ++ EIDY +++G Sbjct: 137 MKASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLD-ERGTQNYDEIDYNMSLALVLG 195 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G+ D + IPM G V SLNVSVA +++YE RQR+ Sbjct: 196 AEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQRRAKVAGAGSPGTTS 255 Query: 180 EAEQQR 185 + + ++ Sbjct: 256 KKKNRK 261 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 8/171 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P YA + ++L + + + +++V PHN+ A+IRTADA GVH V S Sbjct: 74 VAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGVHGVIIPKRRSV 133 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ V V + + L+ G + V D T Sbjct: 134 SLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAEGTEV--YRSDLTGAR 191 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I++G E G+++ D+ + +PM G + SLN SVA ++++YE RQR Sbjct: 192 VIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQR 242 >UniRef50_B9L1B3 tRNA guanosine-2'-O-methyltransferase n=3 Tax=Bacteria RepID=B9L1B3_THERP Length = 217 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 13/210 (6%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R AR+ E+LARRQPDLTV +E VH PHNVSA++R+ DAVG+ VH V+ + Sbjct: 5 ITERRLARMREVLARRQPDLTVVLENVHDPHNVSAVLRSCDAVGLLRVHLVYTLEEFPEL 64 Query: 61 A-SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSD--NAVDFREIDYTRPTCIL 117 + + + + W+++ H +I L+ QG I T+L D +VD ++D T+P ++ Sbjct: 65 SENVSGSALKWLELVFHPSIEACYRTLRSQGFTIYTTYLGDPARSVDLYDLDLTKPVALV 124 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 G E+ G++ EA+A AD + +IPM+GMV+SLN+SVA A+ LYEA RQR+ AG Y R Sbjct: 125 FGNEQRGVSDEAVAGADGNFVIPMMGMVRSLNISVACAVSLYEALRQRRLAGHYAR--PK 182 Query: 178 LPEAEQQRLLFEGGYPVLAKVAKRKGLPYP 207 L E + L +R+G P Sbjct: 183 LSPIELEERLQRWL--------EREGRALP 204 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 5/165 (3%) Query: 1 MNPTRYARICEM---LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 + P Y + E+ L + + ++ + PHN+ AIIRTA+A GV + + + Sbjct: 101 VAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASGVKAIIIPKRRAAV 160 Query: 58 --RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 +T A+AG+ + V + DA+ LK +G I T L++ + D+ +I P Sbjct: 161 VSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERSEDYTKIAKDVPLA 220 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 I++G E G+++ D +PM+G +QSLN SVA+ +I+YE Sbjct: 221 IVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYE 265 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 6/177 (3%) Query: 1 MNPTRYARICEMLARRQ---PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + P Y + +L Q + + + + PHN+ AIIRTA+A+G + + Sbjct: 198 VAPYSYLELDTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGAQGLVVPQRRAVG 257 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A AAG+ V + A+ LK G I + A ++++ P Sbjct: 258 ITSTVAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATA-AKPIYSVEFSGPVV 316 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 +++G E TG++ A DQ + IP++G SLN SVA+ + LYE RQR + + Sbjct: 317 LVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQRSSTSVRQ 373 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 4 TRYARICEMLAR-RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 RYA + ++L +P L + ++ V PHN+ A +R ADA GVH V + T+ Sbjct: 80 RRYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATV 139 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A+G+ V + + LK G+ I+ T +D + TRP ++G Sbjct: 140 HKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTA-ADAPDTLDSVTLTRPLAWVLGA 198 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 E G+ + D + IPM G ++SLNVSV++ + L+E RQ Sbjct: 199 EDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQHSQ 245 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLARRQP--DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM- 57 + + + E+LA + L V ++ + PHNV AIIRTA+AV V + Sbjct: 88 LTSVTFYTLDEVLAAPRNSSPLLVILQGLEDPHNVGAIIRTAEAVAADSVIMIEGKGAPI 147 Query: 58 -RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ A+AG+ S ++V +++ + L +G I+A + + +ID+ RPT + Sbjct: 148 SATVHKASAGALSHMRVCKVKSLVKTLDLLHERGFSIVAADMEAE-HNHTDIDWKRPTVL 206 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +MG E G+ E DQ + IPM G V+SLNVSVA+ ++LYEA RQR Sbjct: 207 VMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQR 255 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 3/153 (1%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWVQV 73 P L + ++ V PHN+ A +RTADA G V S + A G+ + + Sbjct: 94 ETPPLILVLDGVTDPHNLGACLRTADAAGATAVIVPKDKSATLTPVVRKVACGAAEVIPL 153 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + + L+ +G+ ++ T + + + D T P ++MG E G+ + Sbjct: 154 VAVTNLARTLEKLQQRGLWVVGTA-GEAEQEIYQQDLTGPLVMIMGAEGKGMRRLTREHC 212 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 D + +PM G V SLNVSVA+ + L+EA RQRQ Sbjct: 213 DFLVKLPMAGSVSSLNVSVATGVCLFEAVRQRQ 245 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 4/164 (2%) Query: 5 RYARICEMLAR-RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMA 61 Y + ++L +P L + ++ V PHN+ A +R ADA+G H V A S T++ Sbjct: 81 NYVDLDDVLENLSEPPLLLILDGVTDPHNLGACLRVADAMGAHAVIAPKDRSATLNATVS 140 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 A G+ V T + + LK G+ I T + + D D + P +MG E Sbjct: 141 KVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEAD-TDLYHFDASGPLAWVMGAE 199 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G+ + D + IPM G V+SLNVSV+S ++L E++RQR Sbjct: 200 GEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQR 243 >UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U211_9FLAO Length = 229 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 8/216 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R ++LA R TV +E +++PHN SA++RT D GV ++H + R Sbjct: 18 LTDKRKQTFQKVLAERTRHFTVVLEDIYQPHNASAVVRTCDIFGVQDLHVIENRYINRVS 77 Query: 61 ASAAAGSNSWVQVKTH----RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 G+ W+ K + + HLK G QI+AT +A ++ + T Sbjct: 78 KYVTKGAQKWITTKRYKTDGDNTKTCLNHLKTAGYQIIATSPHADANLLQDFKIDKKTAF 137 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENS 176 + G E TGI+ AD + IPM+G +S N+SVA+A+IL + + +N+ R + Sbjct: 138 VFGAEATGISDTVKEHADGFLKIPMVGFTESFNISVAAAIILQDVTTRLKNS----RIDW 193 Query: 177 MLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQ 212 ML E+++L + + V K + Y + + Sbjct: 194 MLSNDEKEQLYLQWIKETIKNVTKIEERFYQQLEDE 229 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLARRQ--PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 + P Y + +++ R L V ++++ PHN AI+RTA+A G V Sbjct: 87 VAPYAYVDLDDVIRRDTGFAPLVVVLDEIADPHNFGAILRTAEASGAQGVVIGKRRQAQV 146 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T +A AAAG+ + V + A+ LK G I+ + V + E+DY PT + Sbjct: 147 TDVVAKAAAGALETLPVARVANVAQALQRLKQAGYWIVGADVEAK-VPYTEVDYRGPTAV 205 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E G+ + D + IP++G VQSLN SVA+ ++LYEA RQR Sbjct: 206 VIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEAVRQR 254 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 7/168 (4%) Query: 4 TRYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 +YA + ++L QP L V ++ + PHN+ AIIR+ADA+G H V + Sbjct: 110 FKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADALGAHGVVIAKDRAVQVT 169 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 T+A A+AG+ ++ I A+ LK G+ + A + P ++ Sbjct: 170 GTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAADVDAKE-PMWSARLDGPLALV 228 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G+ L D + IPM G V SLN SV++ ++LYE RQR Sbjct: 229 VGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQR 276 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 215 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%) Query: 6 YARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRT 59 Y I + L R + L + ++++ P N+ AIIRTA GVH + + T Sbjct: 131 YRDIDDALRLADIRGEKPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPT 190 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 +A + G+ + + A+ LK +G + A + ++ E ++ +++G Sbjct: 191 VAKVSEGAIFSIPCIMVTNLAAALKDLKQRGFWVYAADANGDS--CFEQEFGGSVALVLG 248 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 E GI++ L +D + IPM+ SLNVSVA+ +++YE R+ Sbjct: 249 NEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEIVRKNNR 296 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 215 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 4/163 (2%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASA 63 LA + V ++ V PHN +IIR+AD G+ + S ++ Sbjct: 97 VDEFFAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKV 156 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ +WV + V LK +G I A+ + + + T ++MG E Sbjct: 157 SAGALAWVPFVEVTNLVRTVERLKKEGFWIYGADAGGKALP--NLTFPKKTVLIMGNEGR 214 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+++ D+ + IP G + SLNVSVA+ ++LYE R+++ Sbjct: 215 GMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYEISRKKE 257 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 3/147 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQVKTHRT 78 + ++++ PHN+ AIIR+A++ G V S T+ +AG+ + ++V Sbjct: 86 LIILDKIEDPHNLGAIIRSAESFGFDAVIIPERRSASVTSTVYKTSAGAINNIKVVRVTN 145 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + LK +G I ++ D D +++G E GI++ D I Sbjct: 146 LTRTIKDLKDKGFWIYGLAGEAHS-DISHADLRGKVGLVVGNEGEGISRLVRENCDMLIN 204 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQR 165 IPM+G V SLN SVA+A+ +YE RQ Sbjct: 205 IPMLGRVNSLNASVAAAISMYELLRQN 231 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 215 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 6/171 (3%) Query: 1 MNPTRYARICEMLA---RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 ++ + I E++A + + L V ++++ PHN+ AI+RT D VGV V Sbjct: 70 IDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVGVDGVIIGKHRGVK 129 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+A + G+ V+V + + LK +G + DN+ D+R+ Y P Sbjct: 130 LTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADF-DNSQDYRQASYDMPLV 188 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E GI+ D + +PM G V SLN SVA A++LY+ QR Sbjct: 189 LVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQRN 239 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 5/166 (3%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMRTMA 61 + I L + ++ V PHN+ A +R+A+A GV V T+ Sbjct: 80 QDFEAILAQLNG--CGFLLVLDGVLDPHNLGACLRSAEAAGVDAVILPRDNACPVNATVR 137 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 A+AGS S V V T + ++ L+ G ++ + + +D P ++MG E Sbjct: 138 KASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMA-GEGSRSLYALDLDMPLVMVMGGE 196 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + G+ + D IPM+G ++SLNVSVA+ + L+EA RQR+N Sbjct: 197 EKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEAARQRRN 242 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 7/170 (4%) Query: 2 NPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 RY + ++A R P DL + ++ + PHN+ A+IR+A G + + + Sbjct: 74 TAYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGANGIILPERRAAS 133 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ +AG+ + + + A+ LK +G I + + DY Sbjct: 134 VTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARAD-QSVSDPDYQGAVG 192 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++MG E G+ D I IPM+G + SLNVSV+ +IL+E +R+ Sbjct: 193 LVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRKN 242 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVK 74 P + ++ V PHN+ A +R+A+A GV V + +T AAG+ + Sbjct: 103 NPPFLLVLDGVQDPHNLGACLRSANAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLF 162 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALAD 134 T + + LK G+ S + T P +++G E G+ + D Sbjct: 163 TVTNLATCLERLKKCGIWCYGLDQSG-TRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCD 221 Query: 135 QDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 + IPM+G V SLNVSVA+ + L+E RQRQ Sbjct: 222 DLVAIPMVGTVGSLNVSVAAGVGLFEVVRQRQ 253 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 8/173 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + YA + +ML + + + ++ + PHN+ AIIRTA+ G H V + Sbjct: 95 VAAYEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTANQAGAHGVIIPKRRAV 154 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ ++ V + + LK +G+ + + + +++ P Sbjct: 155 GLTATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADMDGD--VMYDVNMKGPI 212 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E G+ + D IPM G + SLN SVA+ ++ YE RQR Sbjct: 213 GLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQRMQ 265 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 10/174 (5%) Query: 2 NPTRYARICEMLA-------RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 P + + + ++ + P N+ I RTA+A GV + Sbjct: 102 TPQGVLAVVHQMEYTLGQMTEGAIPHLMILDNLQDPGNLGTIFRTAEAAGVTGIIMSRDC 161 Query: 55 SRMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + + G+ + + + + LK + ++ A HL + + DY + Sbjct: 162 VDIYNPKTIRSTMGALYRMPFVYVEDLRETIHTLKEKNIKSYAAHLDGKNT-YDKEDYRQ 220 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 T L+G E G+ +E AD I IPM G V+SLN +VA+ ++++E RQR+ Sbjct: 221 GTAFLIGNEGNGLREEIAQCADTWIRIPMCGQVESLNAAVAATVLMFEVSRQRR 274 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 4/170 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR-- 58 + + + L +L V ++ V P NV ++RTADA G V + + Sbjct: 101 VMEKKRYTFDD-LQSSDRELIVVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSG 159 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A GS + V T + A L+ QG+++LAT L +++ + ++D P I+ Sbjct: 160 KTVRATMGSLFHLPVITGVAEQEVAAFLERQGIRLLATALDSSSL-YHDVDLRSPVAIVF 218 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G E G+++ L AD+ + IP+ G +SLNV+VA+A+ILYEA+RQR+ A Sbjct: 219 GNEGAGVSKVILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQRRVA 268 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 6/167 (3%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMA 61 Y + ++ + + ++Q+ PHN+ AIIR+A++ G V S + Sbjct: 77 FEYKDLRDL---DKYQRLIILDQIEDPHNLGAIIRSAESFGFDGVIIPERRSASVSPIVY 133 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 +AG+ + + + + A+ +K G + + + ++D C+++G E Sbjct: 134 KTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLA-GEASSPIDQVDLKGKVCLIVGNE 192 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G+++ D I IPM G V SLN SVASA+ +YE RQ + Sbjct: 193 GKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQNGFS 239 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 15/177 (8%) Query: 2 NPTRYARICEMLARRQPDL---------TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW 52 P I ++ + + V ++ + P N IIRTADA G+ V Sbjct: 93 TPQG---ILAVIKKNKYSFDKVITEGSSVVILDCLQDPGNAGTIIRTADAAGISAVLMSK 149 Query: 53 PGSRMR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDY 110 + + + GS + + I + + LK +++A+HLS ++ + D Sbjct: 150 GCVDLYSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDYKVIASHLSGK-NNYFQEDL 208 Query: 111 TRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 T + I++G E GI+ E +AD + IPM G +SLN SVA+++++YE RQ+ + Sbjct: 209 TGRSAIIVGNEANGISDETAYMADSLVKIPMPGKAESLNASVAASVMIYEIVRQKSH 265 >UniRef50_C8WR00 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Bacillales RepID=C8WR00_ALIAD Length = 256 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 3/194 (1%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWV 71 +L RR + V ME V HN +AI+R+A+A GV V + G++ W+ Sbjct: 41 VLMRRTSYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGKQPFHPSKGVTQGAHKWL 100 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 ++ IG A+ L +G Q+ AT L + A +D RPT IL G EK G++ EA Sbjct: 101 TLQRMPDIGRAIDALHARGFQVYATDLGEGAQPIDAVDLARPTAILFGNEKDGVSPEARE 160 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFEGG 191 AD IPM G VQS NVSVA+A+ LYE R+ + + + L E+ +L Sbjct: 161 RADGRFYIPMAGFVQSFNVSVAAAIALYELTRRARET---VGDRYALGADERHKLYVTWC 217 Query: 192 YPVLAKVAKRKGLP 205 L + + Sbjct: 218 LRSLHGATREEARR 231 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 4/154 (2%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWV 71 AR +P L V + + PHN+ AIIRTA+A G H + G + +AG+ + Sbjct: 102 ARGEPPLLVIADSIEDPHNLGAIIRTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHL 161 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 V + + LK +G+ I S + + D T P+ +++G E G+++ Sbjct: 162 PVARVTNLVSTIKELKARGVWIYGADASGAR--WDQTDLTGPSALVIGSEGFGLSRLVRE 219 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + +PM G V SLN SVA+ +++YEA RQR Sbjct: 220 TCDALLSLPMRGEVNSLNASVAAGILMYEAVRQR 253 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 7/169 (4%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--G 54 + P YA + +++ + ++ + PHN+ A+IRTA G V Sbjct: 74 VAPFSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAACAGASGVVIPRDRAC 133 Query: 55 SRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + A+AG+ + V I ++ LK G + +A E+ ++ Sbjct: 134 AITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEADA-SLYEVAFSGKI 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E GI D + IP+ G V SLN SVA + LYE R Sbjct: 193 ALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVAR 241 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 7/169 (4%) Query: 1 MNPTRYA-RICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ Y + E L + +Q + + ++Q+ P N AIIR+A+ GV + S Sbjct: 65 VSEYDYYLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSV 124 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+ ++ G+ V + + D++ LK G I ++ + Sbjct: 125 SVTETVVKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAEADGE-TEYYNEPFPEKL 183 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 C+++G E G+ ++ D+ + IPM G + SLNVSVA+ ++L E + Sbjct: 184 CLVLGSEGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISK 232 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%) Query: 7 ARICEMLARRQPD-LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASA 63 + + +L +R+ L + ++ V PHN+ A +R+A+A GV V A + + Sbjct: 84 SALLSLLKKRETPALLLILDGVKDPHNLGACLRSANAFGVRAVIAPKDRAVGVTPVVRKV 143 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 A G+ + + L+ +G+ I+ T + + +EID T I++G E Sbjct: 144 ACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETL-IQEIDLTGDIAIVLGSEGA 202 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 G+ + D IP+ G V+SLNVSVA + LYE QRQR+ Sbjct: 203 GLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQREA 246 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM--ASAAAGSNSWVQV 73 + V ++QV P N+ AI+RTA A GV+ V S T A+AG+ + + Sbjct: 82 PENPFIVLLDQVQDPQNLGAIVRTAVAAGVNMVVLTKDNSAHVTPGSIKASAGTIFRIPI 141 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + + LK +G+ I + E+ RP I+ G E +GI Q Sbjct: 142 VITVNLARYIEKLKDKGVWIYGADMRG--KPLWEVKLERPLGIVFGNEGSGIRQLVKESC 199 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 D+ + IPM + SLNVSV++ +++YE R+ Sbjct: 200 DELVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 3/165 (1%) Query: 7 ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAA 64 + +LA+ L + ++ V PHN+ A +R ADA GV+ + S T+ A Sbjct: 84 QDLPALLAQHTAPLLLVLDGVTDPHNLGACLRCADAAGVNAIIIPRNRSAYLNATVKKVA 143 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFRE-IDYTRPTCILMGQEKT 123 +G+ + + + + L+ + IL T + ++ ++ +T P +++G E Sbjct: 144 SGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEADSHIYQTSFKFTSPIALVVGAEGN 203 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 GI + ++ + IPM+G V SLNVSVA + L+E RQR ++ Sbjct: 204 GIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFEVVRQRLSS 248 >UniRef50_C9RX94 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Geobacillus RepID=C9RX94_GEOSY Length = 247 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 9/208 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R R+ E+L R +TV +E V PHN +A++RTA+A GV +VH V + Sbjct: 30 ILPRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAPFSPN 89 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++ W+ + I A+A LK QG Q+ A++L + + +ID ++PT +L G Sbjct: 90 RLVTRYADQWLTLHHKPDIKTAIADLKSQGYQVYASYLGEGTIPVSDIDLSQPTALLFGN 149 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ-RQRQNAGMYLRENSMLP 179 E +G+++EAL LAD +IPM G VQS N+SVA+AL LY+ R R+ AG + L Sbjct: 150 EHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYDVTERARRQAG----RHYYLL 205 Query: 180 EAEQQRLLFEGGY----PVLAKVAKRKG 203 E++ L + + P + K +++G Sbjct: 206 PGEKKALYEQWMWQTLNPRIRKQLQQQG 233 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 6/169 (3%) Query: 2 NPTRYARICEMLARR---QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 NP I +M ++ Q D + ++V P N+ IIRTA A GV+ + + Sbjct: 91 NPQGIIAIVKMNNKKLDFQGDFYLFCDKVQDPGNLGTIIRTAHAAGVNGIVLSKGTVDIY 150 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + GS ++ + + LK G ++ T L +++ DF + D + Sbjct: 151 NEKTIRSTMGSLFYMPIYYDDDEFSLIKSLKKDGFTLIVTSL-ESSKDFFKEDLKGKIIL 209 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G++ E L LAD+ + IPM G +SLNV++A+++I+YE RQ Sbjct: 210 TVGNEGNGVSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQN 258 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 6/172 (3%) Query: 1 MNPTRYARICEMLARRQ--PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSR 56 M P Y I E+ +++ L + ++++ P N AIIR+A+ +G + + Sbjct: 92 MAPFPYTSI-ELFNQQEITSPLFLILDRIQDPFNFGAIIRSAEIMGADGIFSGTHEQCEV 150 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + +AG+ + V + + K G+ I+ T + + + ++ +PT + Sbjct: 151 TSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNGINIVGTAMQASEK-LNDYNFQQPTAV 209 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 ++G E TGI+ E A + IP G +SLNV+V+++++LYEA RQR + Sbjct: 210 IVGNEGTGISPELQAECTHLVRIPQQGKTESLNVAVSASILLYEASRQRNFS 261 >UniRef50_A6Q996 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Epsilonproteobacteria RepID=A6Q996_SULNB Length = 216 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 122/209 (58%), Gaps = 7/209 (3%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVH-AVWPGSRMRTM 60 + R RI ++L +QP L V ++ VH N+SAI+RT DAVGV ++ +R Sbjct: 10 SQERIDRIDQILCCKQPTLKVMLDDVHSSQNLSAILRTCDAVGVQHLYYTTSDNRDLRIH 69 Query: 61 ASAAAGSNSWVQVKTHRTIGD--AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + G++ WV+ T + + +G Q++ THL + AV FRE+DYT+PT I+M Sbjct: 70 KTITQGAHRWVERTRISTEEQRVFLQKKQKEGYQVVVTHLEERAVPFREVDYTKPTIIVM 129 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G EK G++ E + LAD IIIPM GMVQSLNVSVA+ALILYEA+RQ AG Y + L Sbjct: 130 GNEKDGVSSETVELADTVIIIPMQGMVQSLNVSVAAALILYEAERQLAEAGKY--DTPQL 187 Query: 179 PEAEQQRLLFEGGYPVLAKVAKRKGLPYP 207 + E++++ Y +A+R P Sbjct: 188 SKEEREKIKSGWLYRD--NIARRSKGKIP 214 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ + P N+ I R+A+A G+ V + + G+ V Sbjct: 122 YLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDD 181 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + LK +G+ I HL + ++ L+G E G+++ AD+ + Sbjct: 182 LIYTIDALKRKGVLIYGAHLDGEE--LYDTEFPDKIAFLIGNEGNGLSKAVSDTADRLLR 239 Query: 139 IPMIGMVQSLNVSVASALILYEAQRQRQNA 168 IPM G V+SLN ++++ L+ YEA RQR++A Sbjct: 240 IPMEGKVESLNAAISATLLSYEAMRQRRSA 269 >UniRef50_C4L0U6 tRNA guanosine-2'-O-methyltransferase n=4 Tax=Bacillales RepID=C4L0U6_EXISA Length = 254 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 7/208 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R R+ E+L R +T+ E V PHN SA++R+ADA GV +H V ++ + Sbjct: 39 LMPDRIKRMYEVLNTRTNHITILTEGVDDPHNQSAVLRSADAFGVQTLHVVEGRAKFKPN 98 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 + A ++ WV V H +I +A+ LK G Q+ AT LS+ A+ E+D ++PT +L G Sbjct: 99 SIIAKSADRWVDVVEHGSIEEAIDALKESGYQVYATALSEEAIPLEEVDVSKPTVLLFGN 158 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E +G+++ AL AD + +IPM G VQSLN+SVA+A+ LY+ + ++ + + LP Sbjct: 159 EHSGVSETALHKADGNFVIPMQGYVQSLNISVAAAISLYDVTTRSRH---IVTDGYELPV 215 Query: 181 AEQQRLLFEGGYPVLAKV----AKRKGL 204 +Q R+ + L K K+KG+ Sbjct: 216 EDQARIFKDWMVKSLPKRTLGLYKQKGV 243 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 3/156 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWV 71 A P L + ++ + PHN+ A++R+A A GV V S T+ AAAG+ + + Sbjct: 141 AAGPPPLLLVLDSLQDPHNLGAVLRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALL 200 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + + A+ LK G I + + + E D+T PTC+++G E+ GI Sbjct: 201 DICRTTNLAGALGTLKKHGFWIYGAS-GEASGNLYETDFTGPTCLVLGNEQKGIRPLLKK 259 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 D + IP+ V+SLNVSVA+ ++L E +R++ Sbjct: 260 HCDFLLAIPLAAGVESLNVSVAAGIMLAEIRRRQHF 295 >UniRef50_B7DP24 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DP24_9BACL Length = 249 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 3/194 (1%) Query: 12 MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWV 71 +L RR + V ME V HN +AI+R+A+A GV V + + G++ W+ Sbjct: 37 VLMRRTGYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGKQPFQPSKGVTQGAHKWL 96 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + ++G A+ L +G Q+ AT L D A +D RPT IL G EK G++ EA Sbjct: 97 TIHRMPSVGRAIDALHARGFQVYATDLGDGAEPIDAVDLARPTAILFGNEKDGVSPEARE 156 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFEGG 191 AD IPM G VQS NVSVA+A+ LYE R+ + + L E+ RL Sbjct: 157 RADGRFYIPMAGFVQSFNVSVAAAIALYELTRRARETA---GDRYALDADERHRLYVTWC 213 Query: 192 YPVLAKVAKRKGLP 205 L + + Sbjct: 214 LRSLHGATREEARR 227 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 2 NPTRYARICEMLAR------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 P + E L R R L V ++ V P NV IIR+ADAVG V Sbjct: 92 TPPPVFAVLEKLKRDDTALFRNNSLVVVLDGVRDPGNVGTIIRSADAVGADAVVLGKGSV 151 Query: 56 RMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + GS + + + + + + +G++++ T L + D+T Sbjct: 152 DLYNPKTVRSTMGSLFHLPIIE-ADLAELLPEAQSKGIKLVGTSLQATHTCY-TYDWTAG 209 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 T +LMG E G++ D+ +IIPM G +SLNV++A+ ++LYEA RQR+ + Sbjct: 210 TWLLMGNESEGLSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQRKYS 264 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 4/163 (2%) Query: 3 PTRY--ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 P Y A I + + + ++Q+ PHN AI+RT D V V + Sbjct: 77 PQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFNVDGVIILDKRQVDINA 136 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T+A +AG+ ++V V + +A+ +LK QG I AT L+ A + E+ Y P C+++ Sbjct: 137 TVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNTKAQNVSELKYDIPICLIV 196 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEA 161 G E TGI+ + L AD +I IP G + SLNVSVASA+++Y+ Sbjct: 197 GNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQI 239 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 7/164 (4%) Query: 8 RICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMA 61 + ++ A + + + ++++ PHN+ +I+RTAD+VG H + S +T+A Sbjct: 84 ELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVA 143 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 A+ G+ +V V + + L+ +G+ I T + + D+R +D P I++G E Sbjct: 144 KASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTD-AKGSSDYRTMDVDMPLAIVIGSE 202 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G++ D + +PM G V SLN SVA++L+LYE R+R Sbjct: 203 GFGMSCLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKR 246 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 5/171 (2%) Query: 1 MNPTRYARICEMLARRQPD--LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 + + + ++LA+ + ++ + PHN A+IR+A A G V S Sbjct: 72 VKAQDFVSLAQLLAQSSQSERFFLILDGITDPHNFGALIRSAAAAGCQGVIFAKDRSCPV 131 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T + AAG+ +VQ+ +G A+ LK G+ + + E + P + Sbjct: 132 TGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEG-QSLFEAPLSAPIAL 190 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + G E GI L D I IPM G V+SLNVSVA+ + L+E R Sbjct: 191 VAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVRNHLK 241 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 6/183 (3%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 I A L + ++ + P N+ AIIR+A+A+G + S ++A AAG Sbjct: 260 IDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAG 319 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V + ++ LK +G ++ + + EI + P +++G E GI+ Sbjct: 320 ALEHLPVARVVNLNRSLEKLKDEGYTVVGLA-EEGSSTLSEIKFQGPLVVVVGSEDKGIS 378 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ---RQNAGMYLRENSMLPEAEQ 183 L DQ + IP+ G+ SLN SVA+++ LYE R R +G + P+ Sbjct: 379 LITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVARSKWMRSISGQDPSPRLLKPQISS 438 Query: 184 QRL 186 +++ Sbjct: 439 EKI 441 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 3/163 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASA 63 + A P L + ++ V P N+ A++R+AD GV V S Sbjct: 85 IEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADGAGVDGVLLPERRSAPLSAVAVKT 144 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ +++ + A+ LK Q + + + + D+T P+ +++G+E Sbjct: 145 SAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLD-ERGTMSYDAYDWTTPSVVVLGREGE 203 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G+ D + IPM G V SLNVS A A++LYEA RQR+ Sbjct: 204 GLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEAARQRR 246 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQV 73 + ++ + P N+ A +R+A+A GVH V GS + +AG+ + +++ Sbjct: 95 DNAGFILILDSIQDPRNLGACLRSANAAGVHCVVINKNGSAPINSLVHKTSAGALNQLKI 154 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + + L+ + + ++ S N + +ID T P I+MG E +G+ + Sbjct: 155 FQVTNLSRTIKALQQKNIWVIGLDGSVN-ISIYQIDLTIPNAIIMGAEGSGLRRLTKQSC 213 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 DQ IPM G V+SLNVSVA+ + L+E RQR Sbjct: 214 DQLAKIPMQGKVESLNVSVATGVTLFEVNRQR 245 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 4/166 (2%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---MRTMAS 62 + + + + + ++QV PHN+ A +RTA+A G V + + +A Sbjct: 83 FEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAEAAGCAAVIVLKDHAADVHSPVVAK 142 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 AA G+ S + V + + L+ QG + + + + + T ++MG E Sbjct: 143 AACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLA-GEAELSIYDAKLSGATAVVMGSED 201 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G+ + DQ I IPM G+V+SLNVSVA+ + L+E RQR A Sbjct: 202 KGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALFEINRQRVTA 247 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 5/165 (3%) Query: 5 RYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTM 60 +Y + +++ +P L + ++ V P N+ A R ADA+GV + + T+ Sbjct: 82 KYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVADAMGVDALICPKDNAVGLNATV 141 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G V + + +LK + + T + N ++ ++ ++MG Sbjct: 142 RKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNAN-KSLQKTNFKGSIALVMGS 200 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 E G+ + L D IPM+G V+SLNVSVAS + LYE RQR Sbjct: 201 EGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 5/170 (2%) Query: 2 NPTRYARICEMLARRQP--DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 P ++ R + DL + ++ V PHN+ A +RTADA G + S Sbjct: 83 APRPVVEEKALVQRVRNGLDLVLVLDGVTDPHNLGACLRTADAAGAGAIVTPRHHSAALT 142 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 A+G+ V V + +A LK GM + D +D PT I+ Sbjct: 143 PAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLD-GAAHEDLYAVDLRPPTAIV 201 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 MG E G+ + D IPM G V+SLNVSVA+ + L+EA+RQR+ Sbjct: 202 MGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARRQRRA 251 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 3/163 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + +L L + +++V PHN+ AI+RTADA GV V S T+ A Sbjct: 83 DLKALLEAESNPLFLFLDEVQDPHNLGAILRTADATGVTAVVIPKHNSVGVNATVRKVAC 142 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V+V + + L+ G+ + N ++D+ ++MG E +G+ Sbjct: 143 GAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETNTT-LYQLDFKGAVGLVMGAEGSGL 201 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 + D IPM G ++SLNVSVA+ ++LYE RQR + Sbjct: 202 RKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQRLQS 244 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%) Query: 1 MNPTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 ++P Y + ++ + R+ + ++ V P N+ AI+R+A+ G V Sbjct: 63 ISPIEYKEVDTIIDKCIREGSFILFLDSVEDPQNMGAIMRSAEFFGCAGVVIPKRRCVQV 122 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+A +AG+ + + + + + LK G+ ++ L R +D + P I Sbjct: 123 NETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLDGE--PLRNVDLSPPLAI 180 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 ++G E G+++ D I G + SLN+SVA A+I+YE +R+ Sbjct: 181 VVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 3/155 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWV 71 + + DL + +E + P N+ + RTA+A GV+ + + + GS + Sbjct: 101 EKPKGDLFLILENIQDPGNLGTLFRTAEAAGVNHIFLSRNTVDPFSPKVVRSTMGSLFRL 160 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + LK G+Q+ A L + + P+ L G E G+T+E Sbjct: 161 PFSIEEDLFFLCESLKSAGVQVFALDLDGKKT-HFQAAFQGPSAFLFGNEGNGLTKELSQ 219 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 A + ++IPM G ++SLNV+ +++++LYEA RQR+ Sbjct: 220 CATEKLLIPMEGKIESLNVATSASIVLYEAVRQRR 254 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 3/161 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + ++L L + ++QV PHN+ A IRTA A+G+ V S T AA Sbjct: 86 DLDQLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIAAVIVPRDRSASLTPTARKVAA 145 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGM-QILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 G V+ + +AH+K +++ T L + A+ ++ D++ I+MG E TG Sbjct: 146 GGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKALPIQKYDFSGNVAIVMGAEDTG 205 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + + DQ + IPM G +QSLNVSVA+ + LYEA RQR Sbjct: 206 LRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQR 246 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 13/173 (7%) Query: 1 MNPTRYARICEMLAR------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 + P I ++ + + + + + P N+ IIRTADA G + + Sbjct: 82 VTPQMVMAIIKIPKYEEDTYIKDKGIYIIADNIQDPGNLGTIIRTADAFGASAIFTINNC 141 Query: 55 SRMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + A+ GS + V T + LK +G+++ ATHL + E + + Sbjct: 142 VDVFNPKVLRASMGSIFHIPVI--VTASQILLKLKQRGIKVFATHLKARKL-VHECNISD 198 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E G++ + L D + IPM G +SLNVS+A+ + LYE+QRQR Sbjct: 199 KVAFVLGNEAKGVS--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQRQR 249 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 5/168 (2%) Query: 3 PTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 P RY ++LA+ +P V ++ + PHN+ A+IRTA A G + + Sbjct: 77 PFRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALIRTAYAAGCDGIIIPERRAAQMTP 136 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 AAG+ ++ V + + K G+ + + +V + DY T +++ Sbjct: 137 AAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDGESV-YTTGDYQGGTVLVI 195 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G E G+ + D + +PM G V SLN SVA AL++YE RQR+ Sbjct: 196 GSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEVYRQRE 243 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 205 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 3/162 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMAS 62 + E LA + L + ++++ P N AIIR+A+ V + S T+ Sbjct: 74 DFDEAYEELAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVK 133 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + G+ +V + + D + LK + + ++++ E +Y+ +++G E Sbjct: 134 TSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAA-GEASINYNEENYSNKIILVLGNEG 192 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 +GI ++ D+ I IPM G + SLNVSVAS ++L + Sbjct: 193 SGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILLSRIVNR 234 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 205 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMR 58 + Y I +++ + P + ++ +H PHN AIIRTA+A G+ + S Sbjct: 67 LKDFNYYEI-DVIKKDNPKTVLILDHIHDPHNFGAIIRTANAAGIKHIIIPKDRSTDVTS 125 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 T+ ++G V++ I ++ LK G I ++ L +NAV + ++ Y +++ Sbjct: 126 TVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVPYNKVQYAGNCALVV 185 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 G E+ GI++ + D + IP G VQS+NVSVA+ ++L+E + Sbjct: 186 GNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFELVNR 231 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 205 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 3/166 (1%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA-- 61 + +++ Q L V ++ V P N+ IIR+ADA G V + + Sbjct: 101 QPDYTLEDIIRPDQKPLVVIVDGVQDPGNLGTIIRSADAAGASGVILLKGTVDIYNPKTL 160 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 A GS + V + +A+ +L G+ +L + + + + P I++ E Sbjct: 161 RATMGSLFHLPVIQVSDVNEALEYLASIGVTLLVGEPAGG-IPVFKANLQTPVGIIVANE 219 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 G +E Q I IPM G +SLNV++A+++ILYEA RQR Sbjct: 220 GAGPREEIFRYNHQKITIPMPGCAESLNVAIATSIILYEAIRQRHK 265 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 205 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%) Query: 2 NPTRYARICEMLARR--QPDLT------------VCMEQVHKPHNVSAIIRTADAVGVHE 47 P + EM R + +E P N+ I+RTA+A GV Sbjct: 105 TPQGILAVAEMPDYRLLDKGFLEQAYTKNGKIKLLVLEDTADPGNLGTIMRTAEAAGVTG 164 Query: 48 VHAVWPGSRMRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDF 105 V + + + GS + + + + LK G+ ATHL + Sbjct: 165 VIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVEDLKETIKELKKSGISFYATHLKGE-KSY 223 Query: 106 REIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEA 161 ++I Y+ + I++G E G++ E LAD ++IPM G V+SLN +VA+AL++YE Sbjct: 224 KDIKYSGRSAIIVGNEARGLSDEVADLADTYVLIPMQGKVESLNAAVAAALMMYEV 279 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 205 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 9/169 (5%) Query: 3 PTRYARICEMLAR------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 P A + E+ + + + ++++ P N+ +IRTADA+G V + + Sbjct: 89 PQSVAALVELRREELAAFAPERGMVLVLDRIRDPGNLGTLIRTADALGAAGVVLLENTAD 148 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + + + GS + V T G+ + G + AT L + A D + + T Sbjct: 149 LYNPKVVRSTMGSLFHLPVFTGVKTGELEEWCRQHGYALWATAL-EGAEDMTRLTWPEKT 207 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E G++ E LA ADQ + IPM G +SLNV+VA ++++EA R Sbjct: 208 ALVLGSEAEGVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAAR 256 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 3/158 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 I + + L + +E + PHN+ AI+R+A+A+G H + + ++A AAG Sbjct: 274 IEDCCHLGENPLLMAVEGLTDPHNLGAIVRSAEALGAHGLILPQRRNAGLTGSVAKVAAG 333 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V + ++ LK +G +I+ ++ V E D P I+ G E G++ Sbjct: 334 ALEHLPVARVVNLNRSLDILKDKGYRIVGLA-TEGDVSLTEADLNGPLVIVTGSEGNGLS 392 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 DQ I IP+ G SLN SVASAL+LYE R+ Sbjct: 393 LLTRRYCDQLIRIPLRGATPSLNASVASALMLYEVARR 430 >UniRef50_D1U4M7 tRNA guanosine-2'-O-methyltransferase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4M7_9DELT Length = 226 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 110/197 (55%), Gaps = 9/197 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ R RI ++LARRQ DLT+ M+ + PHNVSA++R+ DA GV +VH + S+ + Sbjct: 25 ISDKRKQRIDQVLARRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVSDVHLYYTTSQWPDL 84 Query: 61 ASAAAG-SNSWVQVKTHRTIGDAVAHL------KGQGMQILATHLSDNAVDFREIDYTRP 113 ++G + W+++ H V +L G QIL T S A + D+T P Sbjct: 85 GKKSSGSAMKWIRLIRHVDAATMVGNLVGGGGSAHDGGQILRTGFSATARPVMDFDFTIP 144 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 T I++ E G + E AL ++ IPM GMVQSLNVSVA+A+ILYEA QR+ AG+Y Sbjct: 145 TAIILSNEHRGTSPELAALVPDEVYIPMQGMVQSLNVSVAAAIILYEAFTQRKRAGLY-- 202 Query: 174 ENSMLPEAEQQRLLFEG 190 + + E L E Sbjct: 203 DAPSFSDEELAALRAEW 219 >UniRef50_Q9LXE4 rRNA methylase-like protein n=11 Tax=Magnoliophyta RepID=Q9LXE4_ARATH Length = 350 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW-PGSRMRT 59 M R R ++ R + + +E + N+SA R+ADA+G+ VH V S+ Sbjct: 136 MMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYN 195 Query: 60 MAS-AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + G+ W+ ++ T + LK +G +I THL + V ++D++ PT I++ Sbjct: 196 GNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVV 255 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E GI+ EAL L+D IPM GMV S NVSVA+ ++++ A R L + L Sbjct: 256 GNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAAGILMHHAVSDRTT---RLGSHGDL 312 Query: 179 PEAEQQRLLFEGGYPV 194 EAE++ L+ E Sbjct: 313 SEAEKEILMAEFSLRH 328 >UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSD9_9SPHI Length = 234 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 11/213 (5%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + + + ++LA+R TV +E ++KPHN SA++RT D G+ +VH + + Sbjct: 21 ITAHKMQVMEKVLAQRTRHFTVVLENIYKPHNASAVLRTCDCFGIQDVHIIEKTREYKVN 80 Query: 61 ASAAAGSNSWVQVKTH------RTIG-DAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 G++ W+ + + + + LK G +I T +++D Sbjct: 81 PFVTRGASQWLTLHKYFQPEEPENAVINCFSSLKSNGFKIYGTSPDPQTRPIQDLDPNEK 140 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 ++ G E GI+ E AD + IPM G +S N+SVA++L L Q A Y+ Sbjct: 141 IALVFGNEHEGISNEVKNAADGLVHIPMRGFTESFNISVAASLFLQNLV---QKASDYVI 197 Query: 174 ENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPY 206 + L E E+Q L Y + K + Y Sbjct: 198 PDYNLTEVEKQELRLTW-YRSIVKNSDIHEKKY 229 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 3/170 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--R 58 P + + QP + M++++ P N A++RTA GV+ V S Sbjct: 76 FKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAGVNGVIMPDKRSSPLSP 135 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++ A+AG+ + V + ++ +LK QG+ + E D T P +++ Sbjct: 136 AVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASGT-VWEADLTGPAAVVV 194 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G E G+ DQ + IP G + SLN SVA AL +YE RQR+ + Sbjct: 195 GNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMRQRRMS 244 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 7/169 (4%) Query: 1 MNPTRYA-RICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ Y + E + + + V ++Q+ P N AIIR+A+ GV + + Sbjct: 77 VSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECFGVDGIVIQDRNNV 136 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+ ++ G+ V + I D + K G ++ + + E Y + Sbjct: 137 KVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKVYGAEADGENL-YYEESYPKKV 195 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 C+++G E G+ ++ D+ + I + G SLNVSVA +IL E + Sbjct: 196 CLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAEMSK 244 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 3/160 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAA 65 I ++ + + + ++ V PHN A IR+A + G+ + S T+ A Sbjct: 86 DIENLIPQDKNAFILILDNVQDPHNFGACIRSAHSAGIDFIIIPKDNSAPVNATVKKVAC 145 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ ++ + A+ LK G+ I+ N ++ I+ G E +G+ Sbjct: 146 GAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAGEAND-SLYSMNLADSVAIVAGAEGSGM 204 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 Q A D +PM+G V SLNVSVA+ + LYE RQR Sbjct: 205 RQRTKASCDFLAKLPMLGEVSSLNVSVATGIALYETVRQR 244 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 6/178 (3%) Query: 1 MNPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 ++ + + ++LA + + + PHN+ A+ RTA GVH + + Sbjct: 80 VSVYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALARTALCAGVHGLIIPKDNAAS 139 Query: 58 RTM--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T A+AG+ ++ V I + LK G+ I + D T P Sbjct: 140 PTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLDGRGE-QTIYDSDLTGPLA 198 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 +++G E GI + D + IP MV SLN SVA A+ +YEA RQR+ + R Sbjct: 199 LVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAMYEAFRQRRAKAVIGR 256 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 4/171 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 + LA L + ++ + PHNV AI+R+AD V V T+ +AG Sbjct: 121 LLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETITRVSAG 180 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + +WV + R + LK G + ++ A+ R + T +++G E G++ Sbjct: 181 AVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEAIGART--FPPKTALVLGNEGHGVS 238 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 D I IP G V SLNVSVA+ ++LYE +R +Q+ R+N M Sbjct: 239 PLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQSPYSVQRQNEM 289 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 4/168 (2%) Query: 1 MNPTRYARICEML-ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT 59 + + + L + L V ++ + N AI RT + G + S Sbjct: 78 VTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCECAGADAIIIPSKNSVSVN 137 Query: 60 M--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 +AG+ + V + + + + +LK G +I+A D+ + +Y P CI+ Sbjct: 138 ADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAAT-EKGDYDYTKANYKDPVCII 196 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 MG E TG+ E L+L D+ I IP++G ++SLNVSVA+ +++YEA +QR Sbjct: 197 MGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEAVKQR 244 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWV 71 A L + ++ V PHN+ A +R+A A GV V S T+ ++G+ + Sbjct: 94 AAGGQALLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSSGAADRL 153 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 V + ++ L+ Q + I + +D +++G E G+ + Sbjct: 154 PVIAVVNLARSLRELQKQDVWIYGLA-GEVETSLYALDLRGNVALVLGGEADGLRRLTRE 212 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D IPM G V+SLNVSVA+ + L+EA RQR Sbjct: 213 HCDVLARIPMPGEVESLNVSVAAGVTLFEAVRQR 246 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%) Query: 1 MNPTRYARIC----EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ Y + + + + + V + + PHN+ AIIR+A+A+G + + Sbjct: 168 VSAYEYVDLEVLVQQAKNKARRPVIVAADGITDPHNLGAIIRSAEAIGAQGIVIPQRRAV 227 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T+A +AG+ + + +G A+ +LK I ++ A D++ P Sbjct: 228 GVTSTVAKVSAGALENIPIARVINLGRALEYLKSNSFWIYGLT-AEAAQSIHTTDFSAPV 286 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 +++G E +G++ L DQ + I + G SLN SVA+ + LYE RQ Sbjct: 287 VLVVGAEGSGLSLSVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYRQ 336 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 5/167 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR-- 58 + +Y + +++ + L + +E + P N+ IIR+ADA G V + + Sbjct: 88 IVEKKYYAVEDII--KNSGLFILLENIQDPGNLGTIIRSADAFGAKAVFVSKGSADIYSD 145 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A GS + + I + + +K + + + A L +I + + ++ Sbjct: 146 KTIRATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGE-KYLNDIKFPNKSAFVI 204 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E G+ E AD + I M G +SLN + A+++I+YEA + R Sbjct: 205 GNEANGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAAKNR 251 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAA 65 + E++ Q L + +E + P N+ ++RT + G+ V + + Sbjct: 122 ALEELIKGEQTHL-LILESIQDPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKTIRSTM 180 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 GS V + + ++ LK Q + + A HL + + E DY + T L+G E G+ Sbjct: 181 GSIYRVPFFITKDLAGTISSLKEQQVNVYAAHL-KGTLSYDEPDYKKKTAFLIGNEGNGL 239 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + E LAD I IPM G V+SLN +++++L++YE RQR++ Sbjct: 240 SDEIADLADTYIKIPMQGQVESLNAAISASLLMYETGRQRRH 281 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 7/172 (4%) Query: 1 MNPTRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P + + E L + +P + ++ V P N +I R ADA GVH + S Sbjct: 76 IKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADAAGVHAIIYQKKRSV 135 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + ++ A+AG+ V + I A+ LK + I V F E D+T+P Sbjct: 136 GIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDV-FWESDFTQPL 194 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +++G E GI Q +AL D+ I IPM G + SLNVSVASALI +E RQR+ Sbjct: 195 GLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQRK 246 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 4/159 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAG 66 I +M + L V ++ + PHN AIIR+A G V S M ++AG Sbjct: 86 IEKMNEKVTKPLVVILDNITDPHNAGAIIRSAYCAGADGVIMQTRRSASIGEGMYKSSAG 145 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + + I + LK +G+ ++ ++ ++ ++DY P +++G E G+ Sbjct: 146 AIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDMNGE--NYYDMDYDMPLALVVGAEGKGLG 203 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 + D IP+ SLN SVA+ ++L+EA + R Sbjct: 204 RLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFEAVKTR 242 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 7/173 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ + I ++L + + ++++ N AI RTA+ VGVH + G+ Sbjct: 91 ISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECVGVHAIILPEKGAA 150 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ +++ + + AV L+ G+Q+ + ++D+T+P Sbjct: 151 PINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSAS-EKAQKLIYDVDFTQPC 209 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 I+MG E+TGI++E L +D+ I +P+ G QSLNVSVA ILYEA RQ+ + Sbjct: 210 AIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAVRQKLS 262 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 202 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 9/172 (5%) Query: 2 NPTRYARICEMLARR------QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 P + M L + +E + P N+ I+R + GV V Sbjct: 107 TPQGIMAVVRMKDSSISDMLTDNPLLILVENLQDPGNLGTILRMGEGAGVTGVIMSSNTV 166 Query: 56 RMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + GS V + DAV+ K G+++ A HL E DY Sbjct: 167 DIYNPKTIRSTMGSIFRVPFVYVQDFSDAVSQCKNAGIKVYAAHLDGKNTYLGE-DYREG 225 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 T L+G E G+T++ AD I IPM G V+SLN ++A ++ YEA RQR Sbjct: 226 TAFLIGNEGNGLTEDITKQADTLIRIPMQGEVESLNAAIACTILTYEAVRQR 277 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 + + + L + ++++ P N+ I+RTA+A + V + + A G Sbjct: 113 VDQKREEQGSLLLLFLDEIQDPGNLGTILRTAEAAAIDGVVLGSGSVDIYNGKVVRATMG 172 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V T +++ D K +G ++L + L N+V + E DY T +++G E G++ Sbjct: 173 ALFRIPVFT-QSLVDTADEWKAKGGRVLISSLEQNSVSYDEADYAGLTALVIGNEGRGVS 231 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 +E A ADQ + IP+ G +SLN +VA+ + +YEAQR+R+ Sbjct: 232 KEMFAKADQFVHIPLYGGAESLNAAVAAGIFVYEAQRKRR 271 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 202 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEMLARRQPD----LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + +A + ++L R + L V ++ + P N AIIR+A+ +G H V S Sbjct: 66 VEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAHGVVVEERRSA 125 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + AAG+ S++ V + + + LK G+ I + A D D + Sbjct: 126 PLSPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGAA-GEAAQDIGRTDLSGKV 184 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +++G E G+ + D + IP G VQSLN SVA+ ++LYEA R R Sbjct: 185 ALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 202 bits (514), Expect = 9e-51, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 3/159 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 I +P L + ++ + PHN+ A++R+A+A+G H + S + A AAG Sbjct: 373 IEGCSELGEPPLLLALDGITDPHNLGAVVRSAEAMGAHGLVLPQRRSAGLTGSAAKVAAG 432 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + V + ++ LK G +++ + V ++D P ++ G E G++ Sbjct: 433 AMEHLPVARVVNLNRSLEKLKDSGYRVIGLAAEGD-VTLMDVDLEGPLVLVTGSEDQGLS 491 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 DQ + IP+ G+ SLN SVA+AL +YE R+ Sbjct: 492 LLTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRN 530 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 7/180 (3%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + P Y + +++A+ + + V + + PHN+ AIIRTA+A+G H + + Sbjct: 313 VAPYPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEALGAHGLVIPQRRAV 372 Query: 57 MRTMASAAAGS--NSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 T A A + V + A+ LK G I + E ++ P Sbjct: 373 GVTAAVAKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAA-GEAKQSIHETSFSGPV 431 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRE 174 +++G E G++ D I IP+ G SLN SVA+ ++LYE RQRQ +L Sbjct: 432 VLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYEVSRQRQQLTHHLEG 491 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%) Query: 2 NPTRYARICEMLARRQ--PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 + Y+ I ++LA + + ++ + P N ++RTA+ G+ V S Sbjct: 94 SEFSYSSIEDLLASGELRGKDILMLDSLQDPQNFGTLLRTAEVFGIGAVIIPEHRSVEVT 153 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 + +A++G+ + + + + LK G +L +++ ++D P C++ Sbjct: 154 PAVVNASSGATEHLNISKVTNLARTASKLKEYGYWVLGLEYDESSSVIWDVDLRIPICLV 213 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +G E +GI + D + IP G + SLN +VA ++ LYE + Sbjct: 214 VGSEGSGIRELVRKRCDLLVKIPQAGRIGSLNAAVAGSIALYEIYK 259 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 11 EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSN 68 + +A + L + ++ + PHN+ A +R+A A GVH V + + A G+ Sbjct: 85 DAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLIPNSRAADVTPVVEKVACGAT 144 Query: 69 SWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQE 128 + + + V ++ QG+ ++ A D T P +++G E GI Sbjct: 145 EILPLFRVSNLRREVERMQRQGIWVVGGA-GGAAQSLYATDLTVPLAVIVGNEGEGIRHG 203 Query: 129 ALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 D + IPM ++SLNVSVA ++L+EA+RQR + Sbjct: 204 LREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQRLFS 243 >UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPX8_9FIRM Length = 271 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 5/168 (2%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TM 60 P + + AR+ L V ++ V P N IIRTADAVG V + Sbjct: 107 PQMAEHLQQAAARK--PLLVVLDGVQDPGNAGTIIRTADAVGADGVILTKGSVDVFSDKT 164 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A GS + V T + + + G Q+LAT L + A +D+ + + I G Sbjct: 165 VRATMGSLFHLPVVTDVSAEEVATFAQAAGCQLLATALDEQAKPHFAVDFGKGSLIAFGN 224 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 E G+++E LA A + + IPM G +SLNV V+SA++LYEA RQR A Sbjct: 225 EGGGVSEELLAAA-EKVYIPMYGEAESLNVGVSSAVVLYEAVRQRHFA 271 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 3/157 (1%) Query: 14 ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM--ASAAAGSNSWV 71 A +Q L V ++ V N AI+R+A+ VG V + +AG+ + Sbjct: 216 AHKQASLVVLLDHVVDEGNFGAIVRSAEVVGASCVIIANARCASVGVGAYKTSAGAVLHM 275 Query: 72 QVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALA 131 + + A+ LK G ++ + +T C++MG E+ GI+ Sbjct: 276 PIVQVVNLARAIDELKEHGFWVIGASEHAQ-QTVWDAPFTGKVCLIMGSEENGISSLVQK 334 Query: 132 LADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 D +P G ++SLNV+ A+ ++ YE RQ + + Sbjct: 335 KCDFICKLPQRGRIESLNVAQAATVMCYEWMRQNKLS 371 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 7/168 (4%) Query: 1 MNPTRYARICEMLARRQPD---LTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 ++ Y E+L + + ++++ PHN+ AI R+A + + Sbjct: 69 VSGYEYKDFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSALFFNFDGIIIPKHREAL 128 Query: 58 RT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + + G+ V + + + LK G I A L + + +++D++ Sbjct: 129 VNDTVYKTSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLEGD--NIKDVDFSGKVA 186 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 I++G E GI+ + +D + IP + SLN SVA+ +I+YE R Sbjct: 187 IIIGNEGKGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYEVIR 234 >UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepID=C0WU39_LACBU Length = 255 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 82/170 (48%), Gaps = 9/170 (5%) Query: 2 NPTRYARIC------EMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 P + E + + + ++ + P N+ ++RTADA G++ V + Sbjct: 87 TPQGVFAVLTTENYHESIPEKLGGSWLMLDNIQDPGNIGTMVRTADAAGMNGVIFGKGTA 146 Query: 56 RMRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + + GS V++ + + +A + + T L+D A+ + +++ T+ Sbjct: 147 DIYNPKVVRSMQGSQFHVRLYS-GDLAVWMAAFNKHNVPVYGTELNDQAISYDDVEPTKQ 205 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++MG E G++ + L DQ++ IPM G +SLNV+VA+ ++++ + Sbjct: 206 FALVMGNEGNGVSADLLDKTDQNLYIPMNGEAESLNVAVATGILIFHFVK 255 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEM---LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + P + + ++ L + + E + KP N+ I+R +DAVG+ + + Sbjct: 106 IAPQFHLSLEDLGKQLKNQNNPFLIVAEAIEKPGNLGTILRCSDAVGLDALIVCDACTDI 165 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + A+ G+ V V + + + LK +G+ ILA + +ID T P Sbjct: 166 HNPNVVRASVGTLFTVPVIESQG-AETLQWLKQKGISILAATPHAK-QELADIDLTGPLA 223 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I +G E+ G++ + + AD + IPM G+ SLNV++A+ ++LYEA RQR+ Sbjct: 224 IAVGTEQLGLSPQWMEQADIQVRIPMYGIADSLNVAMATTILLYEALRQRK 274 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + + ++ P L + M+ V PHN A+IRTA+AVG V S T+ +A Sbjct: 107 DLSQFSPKKGPSLLLAMDHVKDPHNFGAMIRTAEAVGALGVIYPSRRSVGVTGTVIKTSA 166 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ V + + ++ LK +G ++ + D +++G E G+ Sbjct: 167 GAAFRVPLYEVTNLVRSMEILKKEGYWVVGLD-HEEPRDIWSSPLPDKLVLMVGSEGEGL 225 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++ + D IPM+G SLN SVA+AL ++E +R Sbjct: 226 SRLSSERCDDLRRIPMVGKTGSLNASVAAALGMFEWRR 263 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 7/172 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P Y +I +++ + + L + ++ V N+ AI RTA+ GVH + GS Sbjct: 86 ISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSGVHAIIVPKKGSA 145 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + V H +G L G+Q++ + +DYT PT Sbjct: 146 EINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVST-EKTEESIYSVDYTAPT 204 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 CI+MG E G++ + + ++D IPM G + SLNVSV++ ++LYEA RQRQ Sbjct: 205 CIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIRQRQ 256 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQ 72 R+ + +++V P N+ +IRTADA G V + A GS V Sbjct: 99 ERKMKKVLVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVN 158 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 V + + + + LK G + T LS A + ++ + +++G E G+ + LAL Sbjct: 159 VTSV-DLLEKLPELKEDGFHVYGTALS-KATSYEQVAFEEKVALVIGNEAQGVHADVLAL 216 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 D + IP++G V+SLN +VA+ +++Y Q Sbjct: 217 CDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 11/173 (6%) Query: 2 NPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGS 55 + Y + ++L + +P V + + PHN+ A++R+A G H + S Sbjct: 94 SEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDPHNLGAVMRSALLCGAHGIVIPKRGGAS 153 Query: 56 RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T+ ++AG+ + V IG+ + LK QG+ + + V R+ + T P Sbjct: 154 VTPTVIKSSAGAAERLPVARVANIGETIRRLKDQGVFVYCADMDG--VPLRKNNLTGPIA 211 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGM---VQSLNVSVASALILYEAQRQR 165 +++G E +G++Q L D + + M V S NVSVA+ +ILYE Q QR Sbjct: 212 LVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGVDSFNVSVAAGIILYEIQSQR 264 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 8/164 (4%) Query: 2 NPTRYARICEMLARRQ----PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 P A +C + A + +++V P N+ +IRTADA G+ V + Sbjct: 116 TPQGIAAVCAIPAPPSMTTLSGQFLLIDRVQDPGNIGTMIRTADAAGMTGVVLGEGSVDL 175 Query: 58 RT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + A+ GS + V ++ + V LK + + + T L++ + + I+ Sbjct: 176 FNSKVIRASQGSIFHMPVIR-GSLIEWVEKLKEKNIPVFGTSLTEAS-SYTAIEPQPEFA 233 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 +++G E G+ E L +DQ+I IP+ G +SLNV+VA+ ++LY Sbjct: 234 LIVGNEGEGVQSELLEGSDQNIYIPIYGQAESLNVAVATGILLY 277 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAG 66 I ++ R + + ++++ N AI RTA+ G+ + G+ ++G Sbjct: 109 IADVFERGEVPFFLLLDRITDVRNFGAIARTAECTGIQCIVIPGRGAAAINSDAMKTSSG 168 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFRE--IDYTRPTCILMGQEKTG 124 + + + V + + V +L+ G+ ++A +A D E D T P I+MG E+ G Sbjct: 169 ALNHISVCREPDLTETVKYLQESGITVVACT-EKSARDLYERTTDLTGPMAIIMGSEEDG 227 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+ E L + D + IP++G V SLNVSVA+ +ILYEA RQR Sbjct: 228 ISPELLRMVDTHVKIPLLGAVGSLNVSVATGVILYEAVRQR 268 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 87/162 (53%), Gaps = 3/162 (1%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMA 61 +Y + + + +P+L + ++ + PHN AIIR A+ G+ + + T+ Sbjct: 67 YQYYDLGTIF-KDKPNLVLMLDHIQDPHNFGAIIRNANGFGIKHIIIPKNRACEVTPTVL 125 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 ++G+ + +++ ++ D + L+ G I ++ L D A + + PTC+++G E Sbjct: 126 KISSGAFTEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKATKLHKTKFATPTCLIVGNE 185 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++G++ + +D + I G VQSLNV+ A+A++LYEA + Sbjct: 186 ESGVSHTLIKHSDALVYIEQKGTVQSLNVASATAVLLYEATK 227 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 6/172 (3%) Query: 2 NPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + Y + + L R +P + ++ + P NV ++RTA+ VGVH V + Sbjct: 76 SDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVGVHGVVIPGRRAAE 135 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + + ++G+ ++V + + ++ G+ ++ + A ++ +D P Sbjct: 136 VTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLPLA 195 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 +++G E G+ + D + +PM G + SLNV+VA +++LY A R R+ Sbjct: 196 LVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAWRVREQ 247 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 3/167 (1%) Query: 8 RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAA 65 + +L R L V ++ + P N+ IIRTADA + V + + A+A Sbjct: 106 SLDVLLQGRGTPLVVVLDGLQDPGNLGTIIRTADACELQGVITLEGTVDLFHPKVVRASA 165 Query: 66 GSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGI 125 G+ + + G G+Q + E D++RPT + MG E G Sbjct: 166 GALFHLPAFGDLPAPAVLEFFTGAGVQKFVADPRGD-YSLYECDFSRPTALFMGNEARGC 224 Query: 126 TQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYL 172 + A AD+ + IPM G +SLNV VA++L +YEA RQR + + L Sbjct: 225 GEMLHAAADRVVAIPMPGQAESLNVGVAASLFIYEAVRQRLKSSLSL 271 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 3/159 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASA 63 +++ ++ L + ++++ P N AIIRTA+ GV + + Sbjct: 77 LESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDAIIYKKHHQASINDLVIKT 136 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 + G+ +++ + + + + +L+ +G + AT L + + ++DY T ++G E Sbjct: 137 SMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLL-KSQPYEKVDYANKTVFIVGNENK 195 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 G++ L ADQ I I M G VQSLNV VA+ +IL + Sbjct: 196 GVSPLILKNADQSIRIDMFGDVQSLNVGVATGIILAHYR 234 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 7/175 (4%) Query: 2 NPTRYARICEMLA---RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 NP + + + + + +++ P N+ IIR+A A G + + Sbjct: 92 NPQGIIAVVKNKELNIKDEQGFYILADRIQDPGNMGTIIRSAHASGALGIITTKGTVDVY 151 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 A GS ++ + + V+ L+ G +++++ L + ++F ++D I Sbjct: 152 NEKTLRATMGSIFYIPIIQDENLEK-VSTLRQMGFKLISSSLDSD-INFYDMDLRGKIII 209 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 +G E G+ Q+ ++D ++ IPM G +SLN +VA++++++E RQ+ N+ + Sbjct: 210 AIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEVVRQKLNSHVD 264 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%) Query: 1 MNPTRYARI----CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P + + + L + + ++Q+ N AIIRTA+ GV+ + GS Sbjct: 75 ISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAECTGVNGIIIQKNGSA 134 Query: 57 MRTM--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + + I DA+ L+ ++ +A ++ ++++ +P Sbjct: 135 PVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEKTDS-SIYDVNFNQPI 193 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+MG E G+ L + D +P+ G ++SLNVSVA + LYE RQR Sbjct: 194 AIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYETVRQR 244 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 5/158 (3%) Query: 8 RICEMLARRQPDLT-VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAA 64 + E+ +++ +L V ++++ P N+ IIRTA++ V A Sbjct: 109 SLEEIKSQKGKELFFVILDRIQDPGNMGTIIRTAESANADAVIITKGSVDPYNSKTLRAT 168 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 G+ + + + LK ++++A L + + +IDY I++G E G Sbjct: 169 MGAIFHMPIIQCDD-DRWLDDLKENEVKLIAADLDTDKT-YIDIDYNTSIGIIIGNEANG 226 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 I++ L+ DQ +IIP++G ++SLN SVA+++++Y+A Sbjct: 227 ISEALLSKVDQRVIIPILGKIESLNASVAASILIYKAA 264 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 2/161 (1%) Query: 6 YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASA 63 + + + R + + + + PHN+ AI+R+A A G V S T A + Sbjct: 131 LQKFKDAVDRGEKPRIIVCDSLQDPHNLGAIVRSALASGAIGVLLTRERSAPLGGTAAKS 190 Query: 64 AAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKT 123 +AG+ S + + + ++A LK G + +AV + D P CI++G E T Sbjct: 191 SAGAISHMDICQVTNLVKSLAELKKVGAWVFGAIKDADAVSLFDADLNVPACIVVGSEGT 250 Query: 124 GITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 GI D + IPM+G + SLN SVA+A+IL+EA RQ Sbjct: 251 GIRPLVRRECDIQLSIPMVGELDSLNSSVAAAVILFEAMRQ 291 >UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococcaceae RepID=Q8DNE3_STRR6 Length = 252 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 7/167 (4%) Query: 2 NPTRYARICEMLARRQPDL----TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 P + + Q DL + +E V P NV IIRTADA G V + + Sbjct: 87 TPQGIVAVVQKEEVGQADLSQGKFLFLEDVQDPGNVGTIIRTADAAGFTGVIVSDKSADI 146 Query: 58 RTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 ++ + GS+ + + + + K + +LAT LS ++VD+RE+ Sbjct: 147 YSLKTLRSMQGSHFHLPIYRMTSPA-LLDETKKVAIPVLATTLSKDSVDYRELPSIENFV 205 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 ++MG E GI+ ADQ + I M G +SLNV+VA+ ++++ Sbjct: 206 LVMGNEGQGISPLMAESADQLVHISMKGQAESLNVAVAAGILIFHLS 252 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 4/167 (2%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--S 62 + I E+ + +L + +E + P N+ ++RT + GV + + Sbjct: 98 PHYEIDELFKGDKTEL-LVLESIQDPGNLGTMVRTGEGAGVSGIIMNRTTVDIFNPKTVR 156 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 + GS V + + + + K +G+ + A HL + DYT ++G E Sbjct: 157 STMGSLYRVPFYITDDLPETIEYAKSKGVSLYAAHLKGK-CSYDRPDYTGACGFMIGNEG 215 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 G++ E +AD I IPM G V+SLN ++++ L++YE RQR+ G Sbjct: 216 NGLSDEIADMADTYIRIPMEGAVESLNAAISATLLMYECNRQRRLLG 262 >UniRef50_A9S3U1 Predicted protein (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S3U1_PHYPA Length = 241 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAV--WPGSRMR 58 + R RI E++A R + + +E + NVSA+ R+ADA+G VH + R + Sbjct: 34 LGDERKQRIEEVVANRTYSICIAVEGLLDLGNVSAVCRSADALGFQSVHVISNETKKRYK 93 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + G+ W+ + D + L+ +G +I TH++ + V ++D+T PT + Sbjct: 94 KNRKVSMGTEKWLDAELWSNTSDCIDTLRQRGYRIAVTHIAPDTVSIYDMDWTIPTAVFF 153 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSML 178 G E G ++EA+ +D IPM GMV+S N+SVA+ +I++ A R R + + + Sbjct: 154 GNEFMGASEEAIKQSDVRCCIPMAGMVESFNISVAAGIIMHHAARDR---IIRSGVHGDI 210 Query: 179 PEAEQQRLLFEGGYPV 194 +++ L E Sbjct: 211 SPEDRRILEAEFCLRH 226 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 1 MNPTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 ++P Y E+ + + V ++ + P NV +I RT + G + S Sbjct: 77 LSPITYVPEEELFRKTIEEKGFFVVLDHITDPQNVGSIARTVEVFGGIGLLIPKDRSAPI 136 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + +++G+ +++ +I A+ K G + A L D ++D+ P CI Sbjct: 137 NAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYA--LEKGGKDITKVDFAYPMCI 194 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 ++G E G+++ L +D + IPM G V SLNVS A A+ L+E + ++N G Sbjct: 195 VLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQENTG 247 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 6/169 (3%) Query: 2 NPTRYARICEML---ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 P + ++ L + ++QV PHNV AI+R+A A G V + Sbjct: 84 APLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPV 143 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T +A A+G+ V + + A+ LK G + S A E+D T T + Sbjct: 144 TGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESG-ARPLHEVDLTGRTAL 202 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E G+ + D+ +P G V SLNVS A+A+ LYE R+R Sbjct: 203 VLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVARRR 251 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 3/167 (1%) Query: 2 NPTRYARICEMLA-RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 P + + + L + L + +E V PHN+ A +R+ADA GV V + T Sbjct: 82 RPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQAVIVPRRNAAGLTP 141 Query: 61 A--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A G+ + + + L+ +G+ ++ T L + + ++M Sbjct: 142 VACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSESLFTFQAPESLAVVM 201 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E +G+ + DQ + IPM G VQSLNVSVA+ ++L++ + QR Sbjct: 202 GAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVMLFQVRAQR 248 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 + P RYA + E+LA + L V ++++ P N+ AI RTA+ G + S Sbjct: 90 VAPFRYAYVDELLAV-EHPLIVALDEIQDPQNLGAIARTAECAGATGLVIPARRSADVTP 148 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP-TCIL 117 + A+AG+ + + R + D + +G G + V + +DY+ P ++ Sbjct: 149 AVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYGAEGDGG-VPYTGVDYSGPGVVLV 207 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G+ A D I +P+ G + SLNVS A++ +LYE RQR Sbjct: 208 LGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQR 255 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 5/167 (2%) Query: 9 ICEMLARRQP--DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAA 64 + L + L + ++ + PHN+ A IR+ADA GVH + S T+ A Sbjct: 85 LLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADAAGVHMIIVPRDRSANVNATVRKVA 144 Query: 65 AGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTG 124 +GS+ V + + LK + I+ + L N + P ++MG E +G Sbjct: 145 SGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRSNQI-LFNTRLIDPIALVMGSESSG 203 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 I + D+ + IP + SLNVSVA+ + L+E RQR+ + Sbjct: 204 IRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFETVRQRKYQNGF 250 >UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casseliflavus RepID=C9A4E5_ENTCA Length = 259 Score = 195 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 6/163 (3%) Query: 2 NPTRYARICEMLARRQPDL---TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 P + E + L + ++ V P NV +IRTADA G V + + Sbjct: 94 TPQGIFAVVEKQEQDLQTLTGNWLILDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLY 153 Query: 59 --TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + + GSN + + I + L+ G+ I T L+ AV + E+ + Sbjct: 154 STKVLRSMQGSNYHLPIVEGA-IPPFLKQLQAAGVAIYGTELNKEAVPYTELPKGQAAAF 212 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 ++G E G+ QE LAL D+++ IP+ G +SLNV++A+ +++Y Sbjct: 213 ILGNEGQGVNQELLALTDKNLYIPIYGQAESLNVAIAAGILMY 255 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 195 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 7/174 (4%) Query: 1 MNPTRYARICEM----LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ +A + + + L V +++V N A+ R+A+ +GV + G+ Sbjct: 93 LSAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARSAECLGVDAMIVPSRGAA 152 Query: 57 --MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + V + D V +LK G++I+A +++ + D T P Sbjct: 153 QLNSDAVKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIACS-EKASINVYDEDLTDPC 211 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 ILMG E+ GI+ + L AD + IPM G + SLNVSVA+ +IL E RQR Sbjct: 212 VILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMILSEVTRQRLKQ 265 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 195 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 12/175 (6%) Query: 2 NPTRYARICEMLARRQP---------DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW 52 P RY + ML+ P + + +++V P N A++R+A A G V Sbjct: 79 APIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAMLRSAVAAGTDGVIVPT 138 Query: 53 PGSRMRTM--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDY 110 A+AG+ + + + + LK +G + + + D+ Sbjct: 139 REMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYGAEGTAE-TPLWDADW 197 Query: 111 TRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 RP +++G E G+ E D+ + IPM G +SLNVSVA+ L+++EA R R Sbjct: 198 DRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGLLVFEAARSR 252 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 195 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 3/166 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMR 58 M YA + + P L V ++ + N+ AIIR A+A+G + Sbjct: 103 MPEFPYADFEGLFQAQLPALLVILDGIQDSFNLGAIIRCAEALGAGGIVLPEKGQSGVNS 162 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A ++AG+ +++ + + A+ LK +GM+ILA + + P C+++ Sbjct: 163 QAARSSAGAVNFLPIYRVPALDRAIDQLKSRGMKILAAT-EKSEQSLWNVVIPAPLCLII 221 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 G E G++ L+ D + IPM G SLN +VA+ ++L E QRQ Sbjct: 222 GNEGKGVSSALLSACDIQVRIPMAGQTSSLNAAVAAGILLAEIQRQ 267 >UniRef50_A7HIF7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Anaeromyxobacter RepID=A7HIF7_ANADF Length = 239 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 1/206 (0%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 + P R ARI ++A R LTV ME P NV+A++RT +A G+ E+H + + Sbjct: 26 LVPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGIQELHVIEGPMKPYDR 85 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + ++ WV V+ + G+ +AHLK +G I ATHL + A + + ++ G Sbjct: 86 NKKISQNADKWVDVRRWSSTGECLAHLKAEGFAIYATHLGEGARTLDALSFAGKVALVFG 145 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G++ EA+AL+D +IPM G VQSLNVSVA+A+ + +A +R + S L Sbjct: 146 NEHRGVSDEAVALSDAVYVIPMHGFVQSLNVSVAAAISIAKAVERRAAERGRHGDLSELE 205 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLP 205 A + + A++AK + + Sbjct: 206 AAALRERFYVLAVKQRARIAKAERVD 231 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%) Query: 2 NPTRYARICEM---LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 P + EM + +L + ++ + P N+ IIRTADA GV V + Sbjct: 82 TPQGVIAVVEMNIPKVQEDNNLIILLDAIQDPGNMGTIIRTADAAGVDAVVLGDGCVDIF 141 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + A GS + + T + + L+ QG ILAT L D AV++ E+ + Sbjct: 142 NDKVIRATQGSIFHIPIYTAT-LEQEIHMLQTQGFTILATALHD-AVEYTEVSVHNKVGL 199 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++G E GI L A+Q I IP+ G +SLNV +A+ +++Y ++ Sbjct: 200 ILGNEGAGIAPSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 8/165 (4%) Query: 2 NPTRYARICEMLARRQPDL-----TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 I + +++ L + ++ + P NV +IRTADA G+ V + Sbjct: 89 TSQGILAIVTLETQQEQSLSFKGGWLLLDNIQDPGNVGTMIRTADAAGLAGVILGKGTAD 148 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + + + GS+ + V R + + V K QG+ + T L++ A+ + E + Sbjct: 149 IYNTKVLRSMQGSHYHLPVLQ-RELTEVVQAFKKQGLPVFGTELNEAAIAYYEQEAVENY 207 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 +++G E +G++ E LA +++ IPM G +SLNV++A+ ++++ Sbjct: 208 ALILGNEGSGVSPELLAETTKNLYIPMKGQAESLNVAIAAGVLMF 252 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 7/173 (4%) Query: 1 MNPTRYARICEMLARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 ++P +Y + +++ R + L V ++ + PHN+ AIIR A G V + Sbjct: 81 VSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAIIRNCVAFGADGVIIPKWRAAG 140 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 T++ ++AG+ + + A+ LK I+ +ID P Sbjct: 141 VNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVGAENGG--RILEKIDLPFPLA 198 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 +++G E G+ +D I IP ++ SLN S ASA+ILYE ++R+ + Sbjct: 199 VIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAVILYEIAKKRKIS 251 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 7/173 (4%) Query: 1 MNPTRYARI----CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P + + + + L + ++ V N+ AI+RTA VG H + GS Sbjct: 74 LSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGAHALVLPKQGSA 133 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + + + + ++ +L+ G+Q++A H ++ T PT Sbjct: 134 SLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACH-EKTQTSIYQVKLTVPT 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 IL+G E GI + L D IPM+G + SLNVSVA+A+ILYE+ RQR N Sbjct: 193 AILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFRQRNN 245 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 15/181 (8%) Query: 2 NPTRYARICEM--------LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 NP A I + R + + ++++ P N+ IIRTA A G+ + + Sbjct: 92 NPQGIAAITYVPRSGANILFHNRNRGIILILDRIQDPGNMGTIIRTAVAAGIEGIICLKG 151 Query: 54 GSRMRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQ--GMQILATHLSDNAVDFREID 109 + + A+ G+ + + T + + ++ + +++ T L+ + + EID Sbjct: 152 SVDIYNLKVIRASMGAIFSIPILTGVSFKR-LQKIRDEYPDYKLICTDLN-TSKFYHEID 209 Query: 110 YTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEA-QRQRQNA 168 Y P +++G E GI +E L+LAD I IP++G + SLN +V++A++LY+ + R + Sbjct: 210 YQEPLMLVIGNEARGIREELLSLADIKIKIPLMGNIDSLNAAVSTAIVLYDIVVKCRHSN 269 Query: 169 G 169 G Sbjct: 270 G 270 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 7/157 (4%) Query: 8 RICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMA 61 + +++ + + V ++ V PHN AIIR+A+A + S T+A Sbjct: 267 SLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIRSAEAFDCKGIIVPQRRSAGLTGTVA 326 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 AAG+ + V + A+ LK +G I+ D V E P +++G E Sbjct: 327 KVAAGALEHIPVSRVVNLNRAIDELKKKGFIIIGLS-GDGQVPISEFKEKAPVVVIVGAE 385 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALIL 158 GI+ D + IP+ G SLN SVA+A+ L Sbjct: 386 NKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 2 NPTRYARICEMLAR-------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 P I +M R L + E V KP N+ +++R+ADA GV Sbjct: 95 RPEGLIAIAKMKRHTLAEMPVRPNGLYLVAEAVEKPGNLGSMLRSADAAGVDGFIICNKC 154 Query: 55 SRMRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + + + A+ G+ V + +A LK ++ LA + + + ++D T+ Sbjct: 155 TDIYNPNVIRASTGALFSVPLAEAEN-QEAYDWLKKNNIRTLAATPHTDQI-YTDVDMTQ 212 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I++G E+TG+T+ + +D + IPM+G + SLNV+ A+ ++LYEA RQR Sbjct: 213 AVAIVVGTEQTGLTELWMEHSDLPVRIPMLGKIDSLNVATATTILLYEAARQRN 266 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%) Query: 3 PTR-YARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA 61 P R + I + L + + V ++ + PHN+ AI RT++ G + S T A Sbjct: 77 PYREWEDIEKTLNNK--SVIVVLDHIQDPHNLGAIARTSEFAGASAIVIPKARSAGVTSA 134 Query: 62 --SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 A+AG+ S++ V I + + LK +G I+ L + + +++Y P +++G Sbjct: 135 SFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTENL-YNQVNYRFPLALVVG 193 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 E G+ + D + IP G V+SLNVSVA +ILY+ + Sbjct: 194 SEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIILYKIR 236 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 3/165 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 + P + + L + P L V ++ PHN+ A+IRTA+ G V S Sbjct: 96 IPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVAGAACVVCQNDRSATVNG 155 Query: 60 -MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + +AG+ + V +G AV LK +G ++ + +++ Sbjct: 156 TVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTDET-VWSSALPERLALVV 214 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 G E GI+ D + PM G +LN SVA+AL ++E R Sbjct: 215 GSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWVR 259 >UniRef50_A5F9W1 tRNA/rRNA methyltransferase (SpoU) n=16 Tax=Bacteroidetes RepID=A5F9W1_FLAJ1 Length = 220 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 4/207 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R + ++L R T+ +E V++ HN SA++R+ + G+ E++ + R Sbjct: 14 LTDNRKEKFLKVLENRTKHFTIAVEDVYQMHNTSAVMRSCEVFGIQELNIIEQRFGKRID 73 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 A G+ WV + T+ ++ L+ +G QI+AT +N ++ D ++P+ + G Sbjct: 74 KEIALGAQKWVDINRFDTVDGCISSLRDKGYQIIATTPHENDCLIQDFDISKPSALFFGT 133 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 EK G++ E L AD + IPM+G +SLN+SV++A+I+ + +N+ + L + Sbjct: 134 EKDGLSPEILEKADGFLKIPMVGFTESLNISVSAAIIIQNLTNRLRNSDI----KWKLSD 189 Query: 181 AEQQRLLFEGGYPVLAKVAKRKGLPYP 207 E + + + + + + Y Sbjct: 190 EEILQKRLDWAKNSIRDIKRIEARYYQ 216 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 11/173 (6%) Query: 2 NPTRYARI-------CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 P + + L P + +E + KP N+ I+R+ADA GV V Sbjct: 96 RPEGLLAVIKQWNHTLDDLQLSDPPFLLIVEAIEKPGNLGTILRSADAAGVDAVICCDSV 155 Query: 55 SRMRTM--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + + ++ G + T + + + ++ +G++ +AT + + + + D Sbjct: 156 TDLFNPNAVRSSTGVLFSMPTVTASS-DEVIKWIRQKGIRTIATTPHTD-ILYTDTDLRG 213 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 P I+MG E+ G++++ L+ D ++IPM G SLNV++A+ + L+EA RQR Sbjct: 214 PLAIVMGSEQFGLSEKWLSACDTKVLIPMAGQADSLNVAMATLITLFEAVRQR 266 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 4/162 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRMR 58 + +Y + + + D + ++ + P N AIIR+A+ G + Sbjct: 64 LKDFQYHDLGSIF-KDGSDKVLILDHIQDPQNFGAIIRSANVFGFKHIIIPKDRACDVTP 122 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++ ++G V+V ++ DA+ LK +G I A+ L+ A + + I++ Sbjct: 123 SVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQQAKKLNDAKFNEKIAIIV 182 Query: 119 GQEKTGITQEALALADQDIIIPM-IGMVQSLNVSVASALILY 159 G E +G+++ L +D+ I I VQSLNVSVA+ ++LY Sbjct: 183 GNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLY 224 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 192 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 10/176 (5%) Query: 1 MNPTRYARI-------CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 + P I + + + +E + P N+ ++RTA+ VG+ + Sbjct: 89 ITPQGILAIVKQPIYTLKDMTSGDSIRLLLLEDIRDPGNLGTMVRTAEGVGMTGIVLSKD 148 Query: 54 GSR--MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 + + G+ V + +K + + I A HL AV + ++ Y Sbjct: 149 SVDMFNPKVIRSTMGAIFRVPFFYAEDFYACLNQIKNEEIAIYAAHL-QGAVWYDKVSYQ 207 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + IL+G E G++ +A +L+ Q I IPM G V+SLN ++A+A+++YE+ RQ +N Sbjct: 208 GKSAILIGNEANGLSDKATSLSTQRIKIPMEGNVESLNAAIAAAVLMYESYRQIRN 263 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 192 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTH 76 + ++ + P N+ I RTA+A G + + + + G+ + Sbjct: 130 PHVIVLDNLQDPGNLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRSTMGAVFRMPFFYV 189 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 + + AV L QG++ A HL+ V + E DYT L+G E G+ E AD Sbjct: 190 KDLPAAVKSLSSQGIRTYAAHLNGKNV-YDEEDYTEGCAFLIGNEGNGLRDEVSECADCL 248 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 I IPM G +SLN +VA+A++++EA RQR+ Sbjct: 249 IRIPMCGKAESLNAAVAAAVLMFEAGRQRRK 279 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEMLARRQP----DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P + + +++ Q L V ++ + N AIIRTA+ GV + GS Sbjct: 75 ISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAECCGVTGIIIQEKGSA 134 Query: 57 MRTM--ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + + I DAV HL+ ++++A + V +ID +P Sbjct: 135 PINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKTDDV-IFDIDLKQPI 193 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+MG E GI+ L D +PM+G + SLNVSVA LYEA RQR Sbjct: 194 AIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEAVRQR 244 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 6/168 (3%) Query: 4 TRYARICEMLA----RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP--GSRM 57 + ++L + + ++ + PHN+ A+ R+A+AVG + Sbjct: 77 QSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAVGCQGIVLPKDRSCPIT 136 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 A+AG+ +++ V + ++ K G + + + D ++ Sbjct: 137 AAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAGSQSLYDTDLRGNVVLV 196 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 +G E G+ D + IPM G V SLN SVA + L+E RQ+ Sbjct: 197 VGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEVLRQQ 244 >UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B15F Length = 242 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Query: 2 NPTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT 59 P +C + D + ++ V P N+ I+R+A A G ++ + Sbjct: 77 TPQPIMAVCHKKDNILKHYDRVLILDGVQDPGNLGTILRSALAFGFKQIVMSPDCVDLYN 136 Query: 60 --MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 + G+ + + + + L+ G++++AT L NA +I T + Sbjct: 137 DKALRSTQGAVFHLDIVR-DDLHHVIPELQKLGVRVIATSLH-NASSIDDIKSTDKMAFV 194 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 MG E G+ E +A++D + IP+ ++SLNV VA+ +++Y Sbjct: 195 MGNEGNGVRDETIAMSDASLYIPID-TMESLNVGVAAGIVMY 235 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 4/175 (2%) Query: 2 NPTRYA-RICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--R 58 P R + +++ L + +++V PHN+ A +R+A A G H V A + Sbjct: 98 TPARGEGELADLVDAEPEPLLLVLDRVQDPHNLGACMRSAAAAGAHGVVAPRDRAAALSP 157 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + AAG+ + + + L+ G+ ++ + E+D P +++ Sbjct: 158 AVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAA-GEAEKSCYEVDLRGPLALVL 216 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLR 173 G E G+ + D+ + IPM G ++SLNVSVA+ ++L+EA RQR G L Sbjct: 217 GGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQRFPQGGDLG 271 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 6/163 (3%) Query: 2 NPTRYARICEMLAR---RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 + E++ + + ++ V P N+ I+RTADA G V + Sbjct: 88 TAQGILAVVEIVKQEILPHKGRFIVLDAVQDPGNLGTIVRTADAAGFDAVVLGTGTVDLY 147 Query: 59 T--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + + GS+ + V + + + LK +G+Q+ T L ++ D+ + I Sbjct: 148 NDKVLRSMQGSHFHIPVFQ-ANLQEYLPILKEKGVQVAVTALHRDSKDYSVLQGATDVAI 206 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 ++G E G++ + + LAD + IP+ G +SLNVS+ASAL++Y Sbjct: 207 VVGNEGQGVSDDVIDLADVVVTIPIFGKAESLNVSIASALLMY 249 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 4/172 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 ++ +A + E+L + L V + + P N+ AI+RTA+A GV + T Sbjct: 81 VSVKDFATVEELLGT-ENPLIVVLNAIQDPRNLGAILRTAEAAGVDGAVVPSRRAAPLTP 139 Query: 61 ASAAAGS--NSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A+A + ++ V I + K +G+ ++ D V + + D P +++ Sbjct: 140 AAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADP-DGPVSYWDADLGGPLALVI 198 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 G E G+ + A D + IPM G V SLN SVA+AL++YEA RQR+ G Sbjct: 199 GGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEAVRQRRAGGS 250 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 20/187 (10%) Query: 3 PTRYARICEMLARRQP------------------DLTVCMEQVHKPHNVSAIIRTADAVG 44 P +Y+ + E++ R + L + ++ + P N+ A+IR+A A G Sbjct: 141 PFQYSSLHELVERAERKARAMEMADSKASRLSARPLFIALDGITDPQNLGAVIRSAAAFG 200 Query: 45 VHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA 102 V+ V S A +AG+ + + + + A+ LK +G + + Sbjct: 201 VNGVILPERRSASVNAAAWKVSAGAAAHMPIARVVNLTKAIEALKERGYYSIGLDGGGSK 260 Query: 103 VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 + T P +++G E G+++ D IP+ V+SLN SVA+ + LY Sbjct: 261 LVGETGFETDPLVVVLGSEGKGLSRLTREACDAIASIPITSAVESLNASVAAGIALYATV 320 Query: 163 RQRQNAG 169 R+ AG Sbjct: 321 NARRKAG 327 >UniRef50_D0MG21 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG21_RHOM4 Length = 259 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 5/199 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R RI ++L R + +E + NVSA++R+A+A+G + + Sbjct: 52 LTERRRQRIEQVLDGRTYTVVPVVEGLANTGNVSAVMRSAEALGYQGFGIIKGQVQKYKT 111 Query: 61 A-SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + A G++ W+ V T T +AV LK G +I+AT L + A D+T PT ++ G Sbjct: 112 SERTAQGADKWLDVWTWPTAAEAVPALKAAGYRIVATAL-EEAEPIDTFDFTVPTALVFG 170 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G+++E LA+AD +IP++G QS N+SVA+A+ LY AQR R + L Sbjct: 171 NEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALYHAQRDRLA---RRGRHGDLS 227 Query: 180 EAEQQRLLFEGGYPVLAKV 198 + L + K Sbjct: 228 PEWKATLRAVFYLRSVQKA 246 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 5/169 (2%) Query: 7 ARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMAS 62 + ++L + P L + +++ PHN+ ++IRTA+A G V S T+ Sbjct: 111 VSLDDLLDQLAGGPALVILLDRCQDPHNLGSVIRTAEAAGASAVLVPKDRSVRLTGTVVK 170 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A+AG+ V + + A+ LK G ++ +++ ++ + + T + +G E Sbjct: 171 ASAGAALRFPVISVVNVKRALDDLKEAGFWVVGLA-GESSEPLGKLAWDQRTVLAVGAEG 229 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMY 171 TG+ + D IPM G +SLN VA+AL YE R+ +G + Sbjct: 230 TGLAELTRKSCDFLARIPMSGQAESLNAGVAAALGAYEWARRFHFSGDF 278 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 5/168 (2%) Query: 5 RYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA- 61 R+ ++++ V ++QV +NV AI+R+A V V S Sbjct: 92 DKLRVEDIVSGSAFTASTVVLLDQVTDINNVGAIVRSAACFDVDAVILPEHHSPSENCII 151 Query: 62 -SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++G+ V V + + +LK G + + EI + I++G Sbjct: 152 TRVSSGAADLVPVVRVGNLVKTMEYLKQNGYWCYGMDVDGD-KALHEISFCERRAIILGS 210 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 E GI + D + IPM + SLNVS A+A++LY + Q + Sbjct: 211 EGKGIRRLTREHCDHLVKIPMSARINSLNVSNAAAIVLYSSYLQLHRS 258 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 3/158 (1%) Query: 10 CEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGS 67 + ++ + + ++ + PHN+ A +RTA A GV V + + A G+ Sbjct: 83 QQAISGVERPFILVLDSIQDPHNLGACLRTAMAAGVDAVVLPNSCAADITPVVRKIACGA 142 Query: 68 NSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQ 127 + + + V +K +G+ ++ + ++D + +++G E+ GI Sbjct: 143 AEALAIFRVANLKREVEMMKEKGLWVVGGA-GEAEKSLFDLDLSGGLVMIVGNEEKGIHY 201 Query: 128 EALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D IPM ++SLNVSVA ++L+EA+RQR Sbjct: 202 GLRQTCDWLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%) Query: 2 NPTRYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT 59 P + A +C M + + ++ V P N+ +IRTADA G+ V + Sbjct: 85 TPQQIAAVCHMPEEKLATARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFN 144 Query: 60 --MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 +A GS+ + V R + V LK +G+++ T L + A ++EI + ++ Sbjct: 145 GKTLRSAQGSHFHIPVVR-RNLPSYVDELKAEGVKVYGTALQNGA-PYQEIPQSESFALI 202 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 +G E G+ L D ++ +P+ G +SLNV+VA+A+++Y + Sbjct: 203 VGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLR 247 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 7/171 (4%) Query: 4 TRYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 YA + ++LAR +P + +++V PHN+ AI+R+A+AVG H V Sbjct: 75 REYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAVGAHGVIIPRRRGVGLT 134 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 +A AA G+ +V V + + LKG+G+ + F D+T P ++ Sbjct: 135 AAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAAGDAGQEAF-NADFTVPLVLV 193 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 +G E G++ + D + +PM G + SLNV+ A+ +++YE RQR A Sbjct: 194 LGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVLRQRGQA 244 >UniRef50_Q2S465 RRNA methylase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S465_SALRD Length = 247 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 7/214 (3%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 M R RI ++A R + +E + NVSA++R+A+A+G ++H V Sbjct: 38 MRERRLDRIQTVVANRTRSVVPVVEGLVNTGNVSAVMRSAEALGHQDMHVVSGEHDRYKH 97 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 A G+ W+ V HL+ G +++A HL + V R++D+T+PT ++ G Sbjct: 98 SQRTAQGAQHWLDVWHWDAPTACATHLQDAGYRVVAMHLHADTVPIRDLDFTQPTALVFG 157 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E G+T L +D +P+ G +S NVSVA+A+ LY AQ+ R ++ L Sbjct: 158 NEDAGVTDTMLEASDAACEVPLPGFTESFNVSVAAAVALYHAQQDRL---DRQGHHADLS 214 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQG 213 + + RL + + + +G Sbjct: 215 DEARARLEARFCLRSVNNAEQIIER---KLGDEG 245 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 5/179 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MR 58 ++P YA + E+LA P + + + P N+ AI+RTA AVGV V + Sbjct: 79 VSPYNYASLDEILAT-HPSCLLVLAYITDPRNLGAILRTAAAVGVEGVIIPSRRAAGLTA 137 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 A+AG V+V + + +LK QG +L V E ++ P +++ Sbjct: 138 EALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEADAK-VSLWEAEWNEPLVVVI 196 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSM 177 G E TG+ + D + IP + LN SVA+A+ILYE R RQ G +N Sbjct: 197 GGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLR-RQMKGKNAGDNLD 254 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 5/170 (2%) Query: 3 PTRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 P YA + E++ R L V ++ V N AI+R+A+ VG V + + Sbjct: 170 PFAYADLSEIIQRAGSANALVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGV 229 Query: 61 --ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 +AG+ + + + A+ LK G + E ++M Sbjct: 230 GAYKTSAGAVLHLPIAQVSNLPRALEELKAAGFWTCGSTEHA-TQSVWEAPMGGRLALVM 288 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 G E +GI++ L D +P G V+SLNV+ A+ ++ YE R+ Q A Sbjct: 289 GSEGSGISRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLRRTQEA 338 >UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=A4XKC2_CALS8 Length = 271 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%) Query: 2 NPTRYARICEMLAR-----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 P C + ++ + V ++ V P N+ IIR ADA G V V Sbjct: 103 TPQGVLAECSFFDKELDVLKKHNRVVVIDSVQDPGNLGTIIRCADAFGFECVITVNGTVD 162 Query: 57 MRT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + + +A GS V V R + + L +G + T + VD ++ Sbjct: 163 VYNPKVVRSAMGSMFHVDVVRERKKEEVLEALNKRGFALYVTTPYGD-VDISKLSVDDRF 221 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 I++G E G+ L A + + I M G +SLN +VA+A++LYE +++ Sbjct: 222 AIVIGNESKGVDVAFLENATKKVKISMPGKAESLNSAVAAAIVLYELRKK 271 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 19/184 (10%) Query: 3 PTRYARICEMLARRQP----------------DLTVCMEQVHKPHNVSAIIRTADAVGVH 46 P YA + +++AR L + ++ + N+ AI R+A++VG Sbjct: 76 PFAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDAGNLGAIARSAESVGAA 135 Query: 47 EVHAVWPGSR--MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVD 104 + S + ++AG+ S + V + A+A LK +G + Sbjct: 136 GIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALARLKNEGYWVAGASEKAEG-G 194 Query: 105 FREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 + + T C++MG E TG+ + D + +P G+V SLNV+ ++ + +YE RQ Sbjct: 195 IWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQ 254 Query: 165 RQNA 168 + + Sbjct: 255 NRLS 258 >UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 Length = 259 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 8/169 (4%) Query: 1 MNPTRYARICEMLARRQ-----PDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 + P + ++ Q + +++V P NV ++RTADA G V A + Sbjct: 87 VTPQGIMVVADLPDLHQVATDLSGAWLFLDRVQDPGNVGTMVRTADAAGFAGVVAGDGSA 146 Query: 56 RM--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + + + GS + + + +K G + T L+ A DFR + Sbjct: 147 DLFSPKVVRSMQGSQFHLALYE-GDLKKWFEDVKQAGYPVYGTQLNPAAKDFRIVTPQGG 205 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 ++MG E G+++E L ++ IPM G +SLNV+V++ ++++E Sbjct: 206 FALVMGNEGRGMSEELLKQTTANLYIPMRGQAESLNVAVSAGILMFELA 254 >UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH5_9CLOT Length = 270 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 1 MNPTRYARICEMLAR-------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 + P +C ML + + +E + P N+ ++RTA+A+G+ V Sbjct: 92 VTPQGIFCVCAMLDKTDCLDKMDASGQLLGLEDIQDPSNLGTVLRTAEALGIGGVILTRG 151 Query: 54 GSRMR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 + + + G+ + + T+ AV L+ +G +A A ++ ++ Sbjct: 152 CCDIYSPKVLRGSMGAVFRLPMALVETMPPAVNALEQKGFVTMAAVPDREAEPITQVLFS 211 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 P+ +L+G E G+ E + + + IPM+G +SLN SVA++L+++E R Sbjct: 212 SPSIVLVGNEGNGLKPETIRACQRRVTIPMLGRAESLNASVAASLLMWEMMR 263 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%) Query: 1 MNPTRYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 + Y ++L R Q L V ++QV PHN+ A++R+ A G+ V S Sbjct: 149 VPEYDYCSAQDLLERTKENAQIPLIVALDQVTDPHNLGAVLRSGGAFGITGVLISERRSA 208 Query: 57 MRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDY-TRP 113 A +AG+ + V V + A+ LK G ++ V R++D T P Sbjct: 209 SVNAAAWKVSAGAAARVPVARETNLVRALGELKEAGCFVVGLD-GGGDVSLRDLDLATGP 267 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 ++ G E G+++ DQ + IP+ V+SLN +VA+ + LYE +R A Sbjct: 268 LVVVTGAEGKGLSRLVRETCDQIVSIPISSAVESLNAAVATGIALYEVASKRAEA 322 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 189 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 7/167 (4%) Query: 5 RYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 Y + +++ + Q L + ++ + N+ AI R+A G + G Sbjct: 96 NYLDLQDVISHVTEQGQTPLFLILDGITDVRNIGAIARSAVCCGAQAIIIPDRGIAALNE 155 Query: 60 -MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 ++AG+ + V ++ A+ L G++++A+ + + P ++M Sbjct: 156 EAIKSSAGALETISVCRVNSLLKAIDTLHLNGIKVIASEMEAETK-LYDCQLQEPVAVIM 214 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 G E G+ + +D IPM G +S NVSVA+ +ILYEA +QR Sbjct: 215 GSEDKGVFPALIKASDTLFHIPMAGNFESFNVSVAAGIILYEAMKQR 261 >UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=Q6MA83_PARUW Length = 265 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 7/171 (4%) Query: 1 MNPTRYARICEM-LARRQP--DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 + P R+ + ++ L ++P V E + KP N+ I+R++DAVG+ + + + Sbjct: 94 IAPQRHLTLDDLSLKTKKPMAPFFVVAEAIEKPGNLGTILRSSDAVGIDGLIVCDRCTDI 153 Query: 58 RT--MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + A+ G+ V R D + L QG+ ILA +F ++D T P Sbjct: 154 YNPNVVRASVGTLFTVPTVEARG-EDILLWLNKQGIDILAATPHAE-KEFTQVDLTSPVA 211 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 I +G E+ G+++ + A + IPM+G+ SLNV++A+ L+LYE RQRQ Sbjct: 212 IAVGTEQLGLSERWMKQATMQVRIPMMGVADSLNVAMATTLLLYEVLRQRQ 262 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 4/158 (2%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM--ASAAAGSNSW 70 L + L V +E V KP N+ A++R+ADA V P + + ++ G+ Sbjct: 114 LDLPESPLIVVLESVEKPGNLGAVLRSADASKADAVIVCNPLTDLFNPNLIRSSIGAIFT 173 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEAL 130 V + + LK + ++IL L D+A + + D T I+MG E TG+T Sbjct: 174 VPTVACSS-QACMNFLKERNIKILTAQLQDSA-PYYDSDMRGGTAIVMGTESTGLTDAWR 231 Query: 131 ALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 AD I IPM+G + SLNVSV++A++++EA RQR Sbjct: 232 KAADAHIRIPMLGQLDSLNVSVSAAILMFEAVRQRSFK 269 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 7/164 (4%) Query: 2 NPTRYARICEM----LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM 57 +P +M + +E V P N+ IIRTADA G V + + Sbjct: 80 SPQGIIAEVDMPQLAFPTDYQGKYLILEDVQDPGNLGTIIRTADAAGFDGVFLSEKSADV 139 Query: 58 RTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 + GS+ + + I ++ +LAT LS +VD++ + + Sbjct: 140 YNSKTLRSMQGSHFHLPIWR-TDIYKICREMQEHNTPVLATTLSKVSVDYKTVPHQESFA 198 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILY 159 ++MG E GI+ E LADQ + I M G +SLNV+VA+ ++++ Sbjct: 199 LVMGNEGQGISAEMTTLADQLVHITMPGQAESLNVAVAAGILIF 242 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 7/175 (4%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++P +I ++L + + L V ++++ N +IIRT+ VG + + Sbjct: 76 LSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRTSACVGADAIIIPKKYTA 135 Query: 57 M--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 M ++G+ V + + I + + L G++I++ + + + ID++ PT Sbjct: 136 MIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSAT-EKSNIYWYNIDFSGPT 194 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 +++G E+ GI+ + L ++ + IP I + SLNVSVA +ILYE RQR++ Sbjct: 195 ALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVILYEVFRQRKSQS 249 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 5/169 (2%) Query: 1 MNPTRYARICEMLARRQPDL--TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR-- 56 M YA + +L + + V ++ + P N+ A++R+A +G V S Sbjct: 81 MREFPYAALEALLEKPTGEREPLVILDCLQDPQNLGAMLRSACFLGARGVIVPRDRSARV 140 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 T+ AAG+ +++ V + A+ LK G+ I + A + D T P + Sbjct: 141 TSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLD-AQAAQTIYDADLTVPLGL 199 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E+ G+ D + IP G +QSLN + + A+ L E QR+R Sbjct: 200 VVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 6/171 (3%) Query: 4 TRYARICEMLARRQPDL---TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT- 59 + + +++ + +E + P N+ IIR + G+ + + + Sbjct: 95 QKRYTMDDIVKPAPDGRSLAIMVLETIQDPGNLGTIIRAGEGAGITGIVMNHDTADIYNP 154 Query: 60 -MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + + GS + + DA +K +G+++ A HL ++ + DYT L+ Sbjct: 155 KVIRSTMGSIFRMPFVYADDLQDACLLMKNRGVRLFAAHL-KGMNNYDQEDYTDNVGFLI 213 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 G E G+T+E +LAD + IPM G V+SLN ++A++++++E RQR++ Sbjct: 214 GNEANGLTEETTSLADCLVKIPMEGKVESLNAAIAASVLMFETARQRRSCS 264 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 3/160 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MAS 62 R I + +++V HNV A++RTA V V S + MA Sbjct: 94 RIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVLRTAACFNVDAVVLTEHNSPSESCGMAK 153 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 A++G+ V V + + +LK + S +++++ +++G E Sbjct: 154 ASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYGFDASGG-TCLHQVEFSERRVVILGAEG 212 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 G+ D + IPM ++SLNVS A+A+ +Y Sbjct: 213 KGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAIAMYSVF 252 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 4/152 (2%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQV 73 ++ + +E + KP N+ I+R+ADA G V P + + A+ G V + Sbjct: 145 QRAPFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVPL 204 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + +A L+ QG++ +AT + + + + D P I+MG E+ G+++ L Sbjct: 205 VVAES-APVLAWLRAQGVRTIATTPAAEKL-YTDADLRGPLAIVMGSEQYGLSEFWLKNC 262 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 D + IPM G SLNV++A+ + L+EA RQR Sbjct: 263 DLPVRIPMAGQADSLNVAMATIITLFEAVRQR 294 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 11/176 (6%) Query: 2 NPTRYARICEM-------LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 +P A + ++ L R + + + + V P N+ I+R+A+A G V Sbjct: 112 SPQGVAALVKLKTFKLEDLLRAENPMLLGVAGVQDPGNLGTILRSAEAFGATGVLIGDKT 171 Query: 55 SRM--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + + ++GS + V A+ L+ +G+QILAT E+D+T Sbjct: 172 ASPWNPKVIRGSSGSVFRLPVVKVE-WPAALEQLRAKGVQILATSSHKGE-PLPEVDFTG 229 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNA 168 PT +L+G E G+ ++ LA D + IP V+SLN +A+++++YEA RQR Sbjct: 230 PTIVLIGGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQRNTQ 285 >UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selenomonas RepID=C4V3B4_9FIRM Length = 276 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 3/154 (1%) Query: 19 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TMASAAAGSNSWVQVKTH 76 L + +++V P NV I+RTADA G V + + + + AA GS ++ T Sbjct: 124 PLYLALDRVQDPGNVGTILRTADAAGASGVILLRGCADVYGSKVVRAAMGSLFYLPFVTG 183 Query: 77 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 136 D V K + A + V + +RP+ +++G E G+++ L A Q Sbjct: 184 VDEEDLVRFAKENVLCFYAAACDTDGVTHFAAELSRPSLVVLGNEANGVSERLLR-AGQH 242 Query: 137 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 + +PM G +SLNV+ A+ ILYEA RQR+ AG+ Sbjct: 243 LYVPMCGRAESLNVAAAATAILYEAIRQRKYAGI 276 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 2/165 (1%) Query: 2 NPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRT 59 +P Y +L + + ++ + P N++ ++RTA+A GV V + Sbjct: 83 SPYPYVDFATLLDPAPESIVLLLDHLQDPQNIATLLRTAEAAGVRGVVLPERRAAGITPA 142 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + +A+AG+ +Q+ + AV L+ G I+A NA P +L+G Sbjct: 143 VVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVALEPGPNAQSLFRAPLPLPLVLLVG 202 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 E G++ L AD +IIPM+G ++SLN +VA ++ LYE R+ Sbjct: 203 AEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSIALYEIVRR 247 >UniRef50_B0PD55 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD55_9FIRM Length = 264 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%) Query: 1 MNPTRYARICEMLARRQPDL-------TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 ++P + ML R + + + + P NV I+RTA A G V Sbjct: 93 VSPQGVFGVFMMLDNRTQPVKIGSNGKYLLLSSLQDPGNVGTILRTAAAFGTDGVILSAD 152 Query: 54 GSRMR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 + + A+ G + + ++A L+ G+ + A ++ +V R+I Sbjct: 153 CPDLYAPKVLRASMGGVFRARACVSDDLSASIAALRAAGVPVWAAMPAEGSVSLRDISLH 212 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E GI E AL D + IPM +SLN ++A+ +IL+E R Sbjct: 213 GGGAVVVGNEGGGIAPELAALCDGALTIPMEPGCESLNAAMAAGVILWEMYR 264 >UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E768_MACCJ Length = 246 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%) Query: 2 NPTRYARICEMLARRQPDL--TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT 59 P +C M + +L + ++++ P NV IIRTADA G+ V + Sbjct: 86 APQGIYAVCNMKDGKDAELNRVIYLDRIQDPGNVGTIIRTADAAGLDAVIIAKGTVDIYN 145 Query: 60 --MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCIL 117 + A+ GS + V D I T L + A D++E+ + I+ Sbjct: 146 DKVLRASQGSVFHIPVIEM----DFDEVSSKFNGTIYGTSL-EEARDYKEVIPSDNFMIV 200 Query: 118 MGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +G E G+ E L+ D+++ IP+ G +SLNV+V + +++Y + Sbjct: 201 LGNEGQGVNPEILSATDENLYIPIYGRAESLNVAVCAGILMYHFVK 246 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 5/163 (3%) Query: 4 TRYARICEMLA--RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT-- 59 YA + +++A R++P L V ++ V PHN+ AI+R+A +G V + + Sbjct: 93 FEYAALEDLIAAPRQRPALFVALDSVTDPHNLGAIVRSAHVLGADGVILPKDRAAQVSGV 152 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + +AG+ + + + A+ LK + I + A D T C+++G Sbjct: 153 VTKVSAGATEQIAIAQVTNLARALEQLKQAEVWIAGLAAGEGATSLPAFDATGALCLVLG 212 Query: 120 QEKTGITQEALALADQDIIIPMIG-MVQSLNVSVASALILYEA 161 E TG+ D I IPM+G V SLNVSVA+ + LYE Sbjct: 213 AEGTGLRPLVARTCDFLIEIPMLGAGVGSLNVSVAAGVALYEV 255 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%) Query: 4 TRYARICEMLAR--RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM- 60 YA + ++L R P L V ++ V N AI+R+A+ VG V + T+ Sbjct: 130 FPYADVADILDRAGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAAGVIIANKRAAGVTVG 189 Query: 61 -ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 +AG+ + + I A+ LK G + + + ++MG Sbjct: 190 SYKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVSGASERAEG-SCWDAPFEGRVALVMG 248 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREN 175 E GI++ L D +P GM +SLNV+ A+ + +E R +NAG + E Sbjct: 249 SEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATTALCFEWLR--RNAGELMGEE 302 >UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRI6_9FIRM Length = 262 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--R 58 + +I + + +E + N+ IIR+ DA + V + + Sbjct: 97 ITVRHLDKILNLSTIDSSRQFIILENLQDMGNIGTIIRSCDAFSIDGVILAGDCADVFAP 156 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 +A GS + + +A+ L+ G + + LSD +V E + T +++ Sbjct: 157 KTVRSAMGSLFRLPIY-CCDTEEAITLLQKGGFTVYSAELSDRSVRLGEEKLPQKTAVVI 215 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 G E G++ L D+ + IP+ +SLN SVA+++I +E + R+ Sbjct: 216 GNEGNGVSDTVKKLCDKSLFIPIS-SAESLNASVAASVIAWEMSKVRE 262 >UniRef50_B7C827 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C827_9FIRM Length = 244 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 4/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMAS--AAAGSNSWVQVKTHRT 78 + ++ V P NV I+RTA + G+ ++ + + + ++ G+ ++ V Sbjct: 99 ILLLDNVQDPGNVGTILRTAHSFGIDCIYMSKGCADIYNPKTIQSSQGALFYIPVIQ-TD 157 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + L+ + +++ AT L D D ++I ++ IL+G E G+ +E + L++ + Sbjct: 158 LVEEIKKLQERNIEVYATALHDKHKDLQDIKPSKKYAILVGNEGQGVRKELIDLSNHIVK 217 Query: 139 IPMIGMVQSLNVSVASALILY 159 I M +SLNV++A+++ +Y Sbjct: 218 IEME-TFESLNVAIATSICMY 237 >UniRef50_Q112U6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Oscillatoriales RepID=Q112U6_TRIEI Length = 234 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 9/211 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + P R +I +L +R D+TV +E +++PHN SA++R+ D+ GV +VH V + Sbjct: 17 ITPARREKILSVLQQRTRDITVILEDIYQPHNASAVLRSCDSFGVQDVHIVENKNIFTIT 76 Query: 61 ASAAAGSNSWVQVKTHR-----TIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 S GS+ W+ + + + + LK +G I AT + E+ Sbjct: 77 QSVTIGSDRWLTLYRYNEQSINNTEECLKRLKNEGYVIAATTPYKEHITIEELSVNTKVA 136 Query: 116 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREN 175 ++ G E G+++ A AD + IPM+G +S N+SV++AL LY + + N Sbjct: 137 LMFGSEINGLSEYAKNNADVSVKIPMVGFSESFNISVSAALCLYNLMSRLKKEH----NN 192 Query: 176 SMLPEAEQQRLLFEGGYPVLAKVAKRKGLPY 206 L E E+ L + + + Sbjct: 193 WKLTETEKLDLELNWLQKSIKGGELIEKKFF 223 >UniRef50_Q6MNP1 Putative RNA methylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP1_BDEBA Length = 238 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 3/194 (1%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 + R +I +++A R D V +E ++ N+SA++R+A+ +G H + + + Sbjct: 29 LTDERRQKIEKVVALRNFDTAVVLEGIYDRGNISAVMRSAEGLGFGNFHVIETQEKFKEA 88 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 G++ WV+VK + D V LK QG +I THL NA EID++ T +++G Sbjct: 89 NRVTQGADKWVEVKKWKKTADCVKALKNQGYKIYVTHLDANAKPLHEIDFSGKTALVLGN 148 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180 E+ G+T E +A ADQ IIIPM G VQS N+SVA AL LY + R N+ L E Sbjct: 149 ERDGVTPEMIAAADQTIIIPMTGFVQSFNISVAGALGLYHISQDRLK---RRGTNASLTE 205 Query: 181 AEQQRLLFEGGYPV 194 EQ L Sbjct: 206 EEQGILRAHYYMRT 219 >UniRef50_B3RWG3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RWG3_TRIAD Length = 246 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 4/195 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVH-AVWPGSRMRT 59 R ++ + R + V +E + N AI RT DA+G H P R++T Sbjct: 50 FTKERLDKMTNAVKNRTRSIAVVLEGITNEGNEQAIYRTMDALGFQTAHRIPSPLYRLKT 109 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 AG+ W+ +++ ++ + ++ LK G +ILAT + D++ T +++G Sbjct: 110 CGRTDAGAMKWIDIESWKSTEECISQLKSCGYKILATSSENKTKTLDSFDFSNKTAVVLG 169 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E+ GI++EA+ L D I M+G V+S NVSVA+A+ILY + R Y + L Sbjct: 170 SEQEGISKEAMNLVDNVFRISMVGFVESYNVSVAAAIILYHIYQDRIRKLGY---HGDLT 226 Query: 180 EAEQQRLLFEGGYPV 194 EAEQ LL + Sbjct: 227 EAEQDDLLLQYMLKE 241 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 20/189 (10%) Query: 1 MNPTRYARICEMLARRQ------------------PDLTVCMEQVHKPHNVSAIIRTADA 42 ++P +Y+ + E+ R + L + ++ V P N+ A+IR+A A Sbjct: 143 VDPFQYSSLNELADRAEKKAKAMEAANSAAARIAARPLFIALDGVTDPQNLGAVIRSAAA 202 Query: 43 VGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSD 100 G + V S A +AG+ + + V + A+ LK +G ++ Sbjct: 203 FGANGVILPERRSASVNAAAWKVSAGAAAHMPVARVVNLTKALEGLKERGYYVVGLDGGG 262 Query: 101 NAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 + + + P +++G E +G+ + D IP+ V+SLN SVA+ + LY Sbjct: 263 DKLVGETGFESDPLVVVLGSEGSGLGRLVRETCDAIAGIPISSSVESLNASVAAGISLYA 322 Query: 161 AQRQRQNAG 169 R+ A Sbjct: 323 VSNARRKAA 331 >UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0516 n=21 Tax=Borrelia RepID=Y516_BORBU Length = 228 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 3/162 (1%) Query: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62 + + E +++ + ++++ P N AI+RTA+ + V S T+ Sbjct: 64 DFENLLETFKKKENAFILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVLR 123 Query: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122 ++G++ +V+ T I + + LK G I + ++ +I+ + +++G E Sbjct: 124 TSSGASQYVKKMTVTNINNTINLLKNYGFWIYTGDIKGQDINKIKIN-DKKIALILGNEG 182 Query: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQ 164 G+ + +D I IP G + SLNVSV++ ++++E +RQ Sbjct: 183 KGVHKLIKENSDFLIRIPTSGKIDSLNVSVSTGILIFEIKRQ 224 >UniRef50_B0MYM4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYM4_9BACT Length = 228 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 5/209 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM 60 M+ R + L R +T+ E + N SA++R +A GV ++H + + Sbjct: 23 MSEERRQVLQRTLDSRTRYMTILTENTYHAQNASALVRHCEAFGVQDIHTIETRCKFNPN 82 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR-PTCILMG 119 + G++ W+ + HRT +A+A LKG+G +I+AT D P ++ G Sbjct: 83 VNIVRGTDKWIDLHRHRTTAEAIADLKGRGYRIVATTPHREDKTPETFDVAASPFVLVFG 142 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E GI+ E +A AD+ + IPM GMV+SLNVS ++A+++Y + + + L Sbjct: 143 TEHAGISDEIVAAADEFLRIPMCGMVESLNVSASAAILIYMLSSRMRE----TVPDWRLT 198 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKGLPYPH 208 ++ +L+ + + YP Sbjct: 199 AGKRAEILYRWTFASVRDAEAILRRKYPE 227 >UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A651_MYCS5 Length = 233 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 3/161 (1%) Query: 3 PTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW-PGSR-MRTM 60 Y+ I ++ + P + + ++ + +N+ AIIR+A+A G+ ++ + + Sbjct: 68 DFTYSDINKIYESK-PKIVLVLDHIMDTYNLGAIIRSANAAGIKDIVMPKENCADITSNV 126 Query: 61 ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ 120 ++G + ++ + LK I + L N+ + Y P ++G Sbjct: 127 LKVSSGGFIGINFYKVSSLNAFLNKLKKHSYWIYGSMLDKNSTSYYSAKYNFPMAFILGN 186 Query: 121 EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEA 161 E+ GI++ AL D+ I IP G V+SLNVSVA+ ++L++ Sbjct: 187 EEKGISKSALVEVDEKIHIPQSGSVESLNVSVAAGILLFDI 227 >UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7Q7_9FIRM Length = 244 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR--TMASAAAGSNSWVQVKTHRT 78 + ++ V P NV I+R+A + G V + + + + G+ +QV Sbjct: 103 VILLDDVQDPGNVGTILRSAYSFGFDTVVLSKHCADVYSDKVIRSTQGALFHMQVIR-TD 161 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + LK + + ++ T L +NA I+ +L G E G+++E LA D+ + Sbjct: 162 LSQIIDQLKEKKIPVIGTAL-ENASAMSTIEAVDRVALLFGNEGNGVSKELLAKCDETMY 220 Query: 139 IPMIGMVQSLNVSVASALILYEAQR 163 I M +SLNV+VA+ + +Y+ +R Sbjct: 221 IEMH-AFESLNVAVAAGIAMYKFRR 244 >UniRef50_Q038C4 rRNA methylase n=8 Tax=Lactobacillus RepID=Q038C4_LACC3 Length = 253 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 7/164 (4%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--R 58 + P R ++ E L+ + + ++ + P NV ++RTADA G+ V + Sbjct: 93 VMPRRAEQLPEPLSGQ----FLLLDAIQDPGNVGTLVRTADAAGIQTVVFGNGTADAFGP 148 Query: 59 TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILM 118 + A GS V++ + + + + L G+ + + L++ A + I + +++ Sbjct: 149 KVLRAMQGSQFHVRIVSAK-LMPIIKALHRGGIPVYGSELNEKAKSYHSIQPSERFALIV 207 Query: 119 GQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 G E G+ L D ++ IP+ G +SLNV+VA+A++++ Sbjct: 208 GNEGNGMDPVLLQNTDTNLYIPIRGKAESLNVAVAAAVMMFHLV 251 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 7/176 (3%) Query: 1 MNPTRYARICEML----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 ++ Y R+ +++ + + ++ + N AI RTA+ GV + GS Sbjct: 74 LSAIEYTRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECAGVDAIIIPERGSV 133 Query: 57 MR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 +AG+ + V +I A+ L+ G++I+A A + ++ P Sbjct: 134 SVGGDAIKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAAS-EKAADLYTDVPMKLPL 192 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGM 170 I+MG E G + + L +AD + IP +G + SLNVSVA+ +++YE RQ++ Sbjct: 193 GIVMGAEDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVVRQQRLQSS 248 >UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03G93_PEDPA Length = 255 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRT 78 + ++ V P N+ ++RTADA G V + A GS +Q+K Sbjct: 112 WLVLDNVQDPGNIGTMVRTADAAGFTGVVFGDGTADFYNPKILRAMQGSQYHLQLKRL-N 170 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + + K QG I + L +NA D+R+ID ++MG E G+++ + + D ++ Sbjct: 171 LEKWIRNCKDQGSVIFGSILDENARDYRKIDVPDQFSLIMGNEGNGMSERLIEMTDMNLY 230 Query: 139 IPMIGMVQSLNVSVASALILY 159 IP+ G +SLNV+VA+ ++++ Sbjct: 231 IPIKGSAESLNVAVAAGVLMF 251 >UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacillus RepID=Q1G9C5_LACDA Length = 260 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRT 78 V ++ + P NV IIRTADA G V + + GS + + Sbjct: 118 WVLLDDLADPGNVGTIIRTADAAGFDGVILSNKTVDLYNPKVQRSMQGSQFHLNLIK-AD 176 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + DA+A LK + + A+ L A + +++G E G++ E ALAD+ + Sbjct: 177 LPDAIASLKAADIPVYASLLDPAAKQLGDFAPVAQVALIIGNEAHGVSPEIEALADEKLY 236 Query: 139 IPMIGMVQSLNVSVASALILYEAQ 162 IP+ G +SLN +VA+ +++Y Sbjct: 237 IPIKGRAESLNAAVAAGIMIYHFS 260 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 TV ++ V P NV IIRTA A G +V + + + G+ + + Sbjct: 101 TVVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISR-TE 159 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + A+ LK G+ ++ T L A E+ + +++G E GI L + DQ + Sbjct: 160 LIPALNELKELGVTVIGTAL-QGAQPLSELPVSENIAVVLGNEGQGIRPATLDICDQRAL 218 Query: 139 IPMIGMVQSLNVSVASALILYEAQR 163 I M +SLNV+VA+ + LY +R Sbjct: 219 IEMS-SFESLNVAVAAGICLYRYRR 242 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 185 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 85/162 (52%), Gaps = 5/162 (3%) Query: 4 TRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MA 61 + ++ E + ++ + ++++ P N+ IIRTAD+ GV + A+ + + Sbjct: 104 FKKKKLSESINKKDK-FVLILDRIQDPGNMGTIIRTADSAGVDAIIALKGCVDIYNPKVI 162 Query: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121 + GS + + + + V LK I++++L+ + +IDY +++G E Sbjct: 163 RSTMGSIFDMNII-DASQDETVDMLKSLDFNIVSSYLNTE-NFYDKIDYGSKVALVIGNE 220 Query: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 GI +E ++ +D + IP+ G +SLN +++SA+++YE ++ Sbjct: 221 ANGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYEIKK 262 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 9/169 (5%) Query: 2 NPTRYARICEML-----ARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR 56 P +C + + ++ V P N+ I RTADA G + V + Sbjct: 86 TPQGLLAVCRNPGLTPPDKLTGGRYLVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCAD 145 Query: 57 MRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPT 114 + A G+ + + A L G + + AT L ++ VD R++D + Sbjct: 146 PWSPKTIRATMGACFRLP-AWETDLETVRALLDGADIPLYATALREDTVDVRDVDL-KRA 203 Query: 115 CILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 +++G E GI+ EALAL + I IPM +SLN ++A+ ++L+E R Sbjct: 204 AVVIGSEGRGISDEALALCRRTIKIPMRARCESLNAAMAAGVVLWEMCR 252 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 3/160 (1%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 I +L ++ + V ++ V N AI+R+A A GV V GS + +AG Sbjct: 86 IESVLKEKENPVFVLLDGVTDTRNFGAILRSAAATGVDAVFISSTGSAPLNGDVVKTSAG 145 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 V + + + D V +LK + L + + D P ++ G E GI+ Sbjct: 146 GAFKVPISKVQHLKDVVYYLKAHDIPTLGIT-EKSTETLYDSDLKGPLALVFGAEDVGIS 204 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166 L + D +PM V SLNVSVA A++ YE RQR+ Sbjct: 205 NGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYETIRQRR 244 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 8/173 (4%) Query: 4 TRYARICEMLAR----RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--M 57 Y ++L R L V ++QV PHN+ A++R+ A G V S Sbjct: 157 YGYTSALDLLDRARAVGHTPLLVALDQVTDPHNLGAVLRSTGAFGGDGVIIPERRSVGVN 216 Query: 58 RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR-PTCI 116 T+ +AG+ + V V + + LK +G ++ ++ P + Sbjct: 217 ATVWKVSAGAAARVPVARETNLVRTLETLKKEGCFVVGLD-GGGETLMEDLSLADSPLVL 275 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 + G E G+++ D IP+ V+SLN +VA+ + LYE R R+ A Sbjct: 276 VTGAEGAGLSRLVRETCDVIASIPISQTVESLNAAVATGISLYEVDRLRRAAA 328 >UniRef50_C6VPS4 rRNA methylase n=8 Tax=Lactobacillales RepID=C6VPS4_LACPJ Length = 257 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 10/172 (5%) Query: 1 MNPTRY-------ARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWP 53 + P A I ++ + ++ V P N+ ++RTADA G V Sbjct: 87 VTPQGVFALATLPAAIEDLSQLDLTRPWLLLDNVQDPGNIGTMVRTADAAGFAGVAFGTG 146 Query: 54 GSRM--RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYT 111 + + A GS +Q+ + + V L+ QG + + L+ A + +ID Sbjct: 147 TVDIHQPKVERAMQGSQFHLQLIS-TDLDKLVDQLQAQGSPVYGSELNPQAARYLDIDAP 205 Query: 112 RPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQR 163 ++MG E G+++E LA DQ++ IP+ G +SLNV+VA+ ++++ R Sbjct: 206 ASFGLIMGNEGNGMSRELLARTDQNLYIPIKGQAESLNVAVAAGVLMFGLYR 257 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 20/190 (10%) Query: 1 MNPTRYARICEMLARRQ------------------PDLTVCMEQVHKPHNVSAIIRTADA 42 + P +Y + E++ R + L + ++ V P N+ A+IR+A A Sbjct: 139 VQPYQYHSLQELVERAEKKARAMEAADSDSARINARPLFIALDGVTDPQNLGAVIRSAAA 198 Query: 43 VGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSD 100 G + V S T A +AG+ + + V + A+ L+ +G + Sbjct: 199 FGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGG 258 Query: 101 NAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE 160 + + T P +++G E G+++ D IP+ V+SLN SVA+ + LY Sbjct: 259 DKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYA 318 Query: 161 AQRQRQNAGM 170 R+ A + Sbjct: 319 VANARRLAAL 328 >UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2 Tax=Archaeoglobaceae RepID=Y2399_ARCFU Length = 224 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%) Query: 1 MNPTRYARICEMLARR--QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--R 56 ++P +YA ++ + + ++ V N+ A IRTA+ G V Sbjct: 57 VSPIKYADFEFIVKKALTGGSFILFLDNVVDQRNIGACIRTAEFFGAAGVVLPKRRVGSI 116 Query: 57 MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 A+AG+ + + A+ LK G LA L D + P + Sbjct: 117 QEGAVKASAGAVFHIPIARVENFASAIKKLKKLGFTTLAADLDGE--DLEAVSLLLPAAV 174 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 ++G E G+++ D + IP +G V SLN+SVA+ + LY RQ+ Sbjct: 175 VIGGEDRGVSRPVKKQCDFVVKIPGVGKVNSLNLSVAAGIFLYTLSRQK 223 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 4/152 (2%) Query: 17 QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQVK 74 P L V ++QV PHN+ A++R+A A G V + A +AG+ + V V Sbjct: 204 HPPLLVALDQVTDPHNLGAVLRSAAAFGADGVIIPEHRAASVNAAAWKVSAGAAAIVPVA 263 Query: 75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR-PTCILMGQEKTGITQEALALA 133 + A+ LK G ++ V ++ T P ++ G E GI++ Sbjct: 264 QATNLTRALQDLKRAGAFVIGLD-GGGDVALPDLQLTDVPLVVVTGSEGRGISRLVRDTC 322 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 DQ + IP+ ++SLN +VA+ + LY+ +R Sbjct: 323 DQIVSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_C1E8J5 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=C1E8J5_9CHLO Length = 234 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 6/204 (2%) Query: 1 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEV-HAVWPGSRMRT 59 ++ R AR+ ++ +R DL +E V+ NV A+ R+ +A+G+ + G + Sbjct: 28 VSEERIARLDAVVQQRSFDLMPILEGVYDIGNVLAVCRSTEALGIGSLGVISDAGLAFKQ 87 Query: 60 MASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMG 119 + G+ W ++ R+ +A+ +K +G ++L T + + D+T PT +++G Sbjct: 88 SGRTSGGAVKWTNLEQWRSTEEAIREVKARGYRVL-TTVFEGGHPLEHYDWTVPTAVILG 146 Query: 120 QEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLP 179 E+ G++ EA LAD + I M G +SLNVSVAS++I++ A + R L + L Sbjct: 147 NERDGVSDEAKRLADGGVYISMNGFTESLNVSVASSMIMHHAVQDRTR---RLGSHGNLS 203 Query: 180 EAEQQRLLFEGGYPVLAKVAKRKG 203 E E++ L L ++ G Sbjct: 204 EREKETLRAVYL-ARLVPRYQKHG 226 >UniRef50_D2EID2 TrmH family RNA methyltransferase n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EID2_PEDAC Length = 256 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 3/147 (2%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSWVQ 72 + ++ V P N+ ++RTADA G V + A GS +Q Sbjct: 107 NDTTGQWLLLDNVQDPGNIGTMVRTADAAGFTGVIFGSGTADFYNPKILRAMQGSQYHLQ 166 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALAL 132 +K + + + + L ++A +R+ID + ++MG E G++ E + Sbjct: 167 LKRL-NLQKWIEACHQAHQAVYGSILDEHAQSYRDIDAPKDFSLIMGNEGNGMSPELVKA 225 Query: 133 ADQDIIIPMIGMVQSLNVSVASALILY 159 D ++ IP+ G +SLNV+VA+ ++++ Sbjct: 226 TDCNLYIPIKGNAESLNVAVAAGVLMF 252 >UniRef50_UPI0001BC4585 23S rRNA methyltransferase n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4585 Length = 224 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 3/141 (2%) Query: 21 TVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAGSNSWVQVKTHRT 78 + ++ + P N+ +IR DA G ++ + ++ GS V++ Sbjct: 75 LIVLDDIQDPGNLGTMIRLVDAAGFSDIFLTKHSVDCYNEKVVRSSMGSIFHVRLHVMEK 134 Query: 79 IGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDII 138 + + +L+ + +L T L ++V + E+ + G E G+++E L LA+Q II Sbjct: 135 -KEILEYLQTENYHVLVTTLQRDSVAYTEMQLKEKNAFVFGNEGHGVSKEFLELAEQKII 193 Query: 139 IPMIGMVQSLNVSVASALILY 159 IP+ G +SLNV++A+ +IL+ Sbjct: 194 IPISGQAESLNVAMAAGIILF 214 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 9/172 (5%) Query: 1 MNPTRYARICEMLARR-----QPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS 55 + P I + + P V +++ P N+ IIR A+A G V Sbjct: 87 VTPQGVFAIADFKIKNINDLSNPTFIVIADRIQDPGNIGTIIRAAEAFGAEAVLVTHGTC 146 Query: 56 RMRTMA--SAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRP 113 + A+AGS ++ V + + + G+ ++ T L + +D+T+P Sbjct: 147 NPFSNKALRASAGSIFFLPVIKVT-VKEIEEFVSKYGLNLVITDL-KATISSFNMDFTKP 204 Query: 114 TCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 I+ G E G++Q+ A+ IP G +SLNV++A+ ILYE RQR Sbjct: 205 LAIVFGNESKGVSQDLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQR 256 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 3/163 (1%) Query: 16 RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR--MRTMASAAAGSNSWVQV 73 + L V ++ + P N+ AIIR+ A V S + +AG+ V V Sbjct: 173 KNSPLIVALDGITDPRNLGAIIRSVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPV 232 Query: 74 KTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALA 133 + A+ KG G +L + P CI++G E G+++ Sbjct: 233 ARAGNLNRALESFKGMGYFVLGLDGDGDVSLPALAVAKEPVCIVVGSEGKGLSRLVRENC 292 Query: 134 DQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENS 176 DQ + IP+ ++SLN S+A + LYE RQR + G + N Sbjct: 293 DQIVSIPIDSAMESLNASMAVGITLYEIARQR-SGGSAEQGNP 334 >UniRef50_A5US41 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexaceae RepID=A5US41_ROSS1 Length = 262 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%) Query: 1 MNPTRYARICE--MLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMR 58 ++P + +A +P L + ++ V P N+ ++R+A+AVGV +V + Sbjct: 91 VHPQGVVALASWPHVAPGKPGLLLVIDAVQDPGNLGTLLRSAEAVGVAQVLCSVGTVDLY 150 Query: 59 --TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCI 116 + +A G++ + ++ + L + A + + D+ +P+ + Sbjct: 151 APKVVRSAMGAHFRLAMEQDLSWDAIGERLASVD-HVYAADPEAR-MPYYAADWRQPSAL 208 Query: 117 LMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165 L+G E G++ A LA + I IPM G +SLNV+VA+++IL+EA RQR Sbjct: 209 LVGNEAHGLSDAARRLATKQIAIPMRGGTESLNVAVAASVILFEALRQR 257 >UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJH5_9BACT Length = 282 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 8/163 (4%) Query: 13 LARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMA--SAAAGSNSW 70 L L V + + P N+ A+IRTA+A G + AAAGS Sbjct: 110 LTHHPAPLFVLADGIQSPGNLGALIRTAEAAGATGILVTVGTVDPFQPKALRAAAGSAFR 169 Query: 71 VQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEA- 129 + + ++ D + L QG++++ + + + D+ +P + +G E G+ Sbjct: 170 LPIIAGSSVADELQKLYRQGVRLVTADIHGD-TPYEAFDWRQPVLLWLGSEGHGLRSLTD 228 Query: 130 ---LALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG 169 LA + + IPM G V+SLNV+VA A++LYEA+RQR+ + Sbjct: 229 DFKHRLAARLV-IPMEGQVESLNVAVAGAILLYEARRQRRQSS 270 >UniRef50_Q7MW92 RNA methyltransferase, TrmH family n=2 Tax=Porphyromonas gingivalis RepID=Q7MW92_PORGI Length = 254 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 15/176 (8%) Query: 2 NPTRYARICEMLARRQP---DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM- 57 P + ++ A +P LT+ ++ V P NV I+RTAD G+ V + + Sbjct: 80 TPQPLMAVFDLPAEPEPVVEGLTLLLDGVQDPGNVGTILRTADWFGIRHVWLGTGSADVF 139 Query: 58 -RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREI---DYTRP 113 + A+ G+ + VQ + D +A+ + QG+ + L + E ++T P Sbjct: 140 SPKVVQASMGALARVQPTPLKNTVDTLAYFRRQGIPVYGAFLDGQS--LYEAPLPNFTEP 197 Query: 114 TCILMGQEKTGITQEALALADQDIIIP-----MIGMVQSLNVSVASALILYEAQRQ 164 +++G E GI+ E A + IP + G +SLNV++A+A++ E +R+ Sbjct: 198 AILVLGSEGRGISPEVAAEITDRLTIPASGLSVKGHTESLNVAIATAILCSEWRRR 253 >UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR56_AZOPC Length = 274 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 9 ICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRT--MASAAAG 66 + L L + +E + KP N+ AI+RTA+A + P + + + ++ G Sbjct: 114 LLADLNLSNNPLIIVLESIEKPGNLGAILRTAEAAKIDATIICNPSTDIYNPNVVRSSIG 173 Query: 67 SNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGIT 126 + + +A+LK + +QI A L+ + D+T + I++G E G+T Sbjct: 174 CLFSNPIAVASN-EETLAYLKSKSVQIFAAELTAFKQ-YYNTDFTSASAIVIGAEVNGLT 231 Query: 127 QEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 L A Q I IPM G++ SLNVSV+ A+I +EA RQR + Sbjct: 232 NFWLDNAHQRIKIPMQGIIDSLNVSVSVAIITFEAIRQRNS 272 >UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0619 Length = 262 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 10/175 (5%) Query: 2 NPTRYARICEMLAR-------RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPG 54 P I + + +Q + +E + P N+ I+RTA + V + Sbjct: 86 TPQGLMAIVKQRNKSLNDFTIKQNGTYLILEGIKDPGNLGTIVRTAYGLFVDAIFLTKDC 145 Query: 55 SRMR--TMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTR 112 + + A G+ S + + + + V + ++I AT L + + + Sbjct: 146 VELYSPKVVRATMGAISKIDIIRNYEMTSYVDFFRENKVKIYATDLY-QSNNLYTTKFDG 204 Query: 113 PTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQN 167 + I++G E TGI++ A AD I IP ++SLN ++A++++LYE RQ+ Sbjct: 205 SSAIVIGNEATGISEYTRAQADSTIKIPTRDNLESLNAAIATSIVLYEVARQKNF 259 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 182 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 8/168 (4%) Query: 1 MNPTRYARICEMLA---RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR- 56 + P + R+ + + + DL + ++++ P N+ +IIR+A +G + + Sbjct: 78 VEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACLGFSTIILPSRRTVG 137 Query: 57 -MRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 115 ++ A+G+ V V + A+ LK +G I + ++ + DY+ P Sbjct: 138 LTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYGADMGGQSIV--KTDYSFPAV 195 Query: 116 ILMGQEKTGITQEALALADQDIIIPM-IGMVQSLNVSVASALILYEAQ 162 +++G E TGI ++ DQ + IP G V SLN + A+++I+++ Sbjct: 196 LVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMFDMF 243 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 182 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 10/158 (6%) Query: 15 RRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM--RTMASAAAGSNSWVQ 72 R++ + V ++QV P N+ AI+RT A G + S + +A AAG+ V Sbjct: 161 RQERPVLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMDRVP 220 Query: 73 VKTHRTIGDAVAHLKGQGMQILATHLSDN--------AVDFREIDYTRPTCILMGQEKTG 124 + A+ L G L +R+ R I+MG E G Sbjct: 221 FARVTNLSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSEGEG 280 Query: 125 ITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQ 162 + + D + IPM G +SLNVS A+++ LYEA Sbjct: 281 LRRLVAEHCDHLVKIPMPGGFESLNVSHATSIALYEAL 318 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.188 0.592 Lambda K H 0.267 0.0577 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,803,354,737 Number of Sequences: 3077464 Number of extensions: 102377802 Number of successful extensions: 242297 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2604 Number of HSP's successfully gapped in prelim test: 605 Number of HSP's that attempted gapping in prelim test: 234829 Number of HSP's gapped (non-prelim): 3449 length of query: 229 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 105 effective length of database: 658,790,820 effective search space: 69173036100 effective search space used: 69173036100 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 92 (39.6 bits)