Phyre 2 alignment of P0AGJ2 with c2qipA_

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Job Description | P0AGJ2
Confidence | 13.37% | Date | Thu Jan 5 11:29:18 GMT 2012
Rank | 76 | Aligned Residues | 28
% Identity | 18% | Template | c2qipA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:protein of unknown function vpa0982; | PDBTitle: crystal structure of a protein of unknown function vpa0982 from vibrio2 parahaemolyticus rimd 2210633
Resolution | 1.48 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | P | T | C | I | L | M | G | Q | E | K | T | G | I | T | Q | E | A | L | A | L | A | D | Q | D | I | I | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | K | K | V | T | V | Y | G | V | P | . | R | L | T | S | Q | T | L | I | D | C | A | D | N | F | V | A | I | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | G | . | G | G | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 130 | . | . | . | . | . | . | . | . | . |  | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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