Phyre 2 alignment of P0AGJ2 with d2gy9b1

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Job Description | P0AGJ2
Confidence | 12.31% | Date | Thu Jan 5 11:29:18 GMT 2012
Rank | 81 | Aligned Residues | 39
% Identity | 23% | Template | d2gy9b1
SCOP info | Flavodoxin-like | Ribosomal protein S2 | Ribosomal protein S2
Resolution | 15.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | R | Q | P | D | L | T | V | C | M | E | Q | V | H | K | P | H | N | V | S | A | I | I | R | T | A | D | A | V | G | V | H | E | V | H | A | V | W | P | G | S | R | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | G | L | P | D | A | L | F | V | I | D | A | D | H | E | H | . | . | . | . | I | A | I | K | E | A | N | N | L | G | I | P | V | F | A | I | V | D | T | N | S | D | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S |  | T | T | T | T |  | . | . | . | . |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |  |  |  |  | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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