339 d1civa1 Probab=97.85   E-value=0.00014  Score=48.67  Aligned_columns=121  Identities=11%

Q ss_pred             HHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHCCCC------EEEEEECCCC-----CHHHHCCCCCEEEEECCCCCH
Q ss_conf             1024330298---6999477687889999999974996------8999946863-----124332789759998637998
Q batch____       307 QPACTARRRT---RVLILGVNGFIGNHLTERLLREDHY------EVYGLDIGSD-----AISRFLNHPHFHFVEGDISIH  372 (660)
Q Consensus       307 ~~~~~~~~~k---kILITGatGFIGs~Lv~~Ll~~g~y------~V~~l~r~~~-----~~~~~~~~~~~~~i~~Di~~~  372 (660)
                      +...++++.|   ||.||||+|+||++|+-.|.+..=+      +++.+|....     +..--+.+..+.....-.-..
T Consensus        20 ~~e~~~~~~k~~~kV~V~GAaG~Ig~~L~~~La~g~~~g~d~~veL~LlDi~~~~~~l~GvamDL~d~a~p~l~~v~i~~   99 (182)
T d1civa1          20 KAEEETKSWKKIINVAVSGAAGMISNHLLFKLASGEVFGPDQPISLKLLGSERSFAALEGVAMELEDSLYPLLRQVSIGI   99 (182)
T ss_dssp             TTSSSCTTSCCCEEEEEETTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES
T ss_pred             HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             47777516898549999979867779999998538433888638999941764057888889988631001467568707


Q ss_pred             HHHHHHHHCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC---CCEEEEC
Q ss_conf             8999887529989998885576256651999999988999999999999729---8099975
Q batch____       373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPS  431 (660)
Q Consensus       373 ~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlLea~~~~~---~kfI~~S  431 (660)
                      .  ...+.+++|+||-+|+.  ++..-.+-.+.++.|..-...+.+++.++.   .+++.+|
T Consensus       100 ~--~~~a~~~aDivvi~ag~--prkpg~tR~dLl~~N~~I~k~~~~~i~~~a~p~~~vivvs  157 (182)
T d1civa1         100 D--PYEIFQDAEWALLIGAK--PRGPGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVG  157 (182)
T ss_dssp             C--HHHHTTTCSEEEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             C--HHHHHCCCCEEEEECCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             8--26872699899994467--8898988899999899999999999998579975999976