26 c1in8A_ Probab=99.80   E-value=5.1e-16  Score=126.35  Aligned_columns=257  Identities=15%

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCC---EEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCC
Q ss_conf             3433133678999999999976078997---9998889986899999998606546887699983438987988886386
Q batch____       377 EFGEIIGRSEAMYSVLKQVEMVAQSDST---VLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGH  453 (692)
Q Consensus       377 ~~~~iig~S~~~~~~~~~~~~~a~~~~p---vli~Ge~GtGK~~~A~~ih~~s~~~~~~~~~i~c~~~~~~~~~~~l~g~  453 (692)
                      +|+|+||...+..++...+......+.+   |+|+|++||||+++|++|+..   .+.+|+.++|............   
T Consensus         7 ~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~---l~~~~~~i~~~~~~~~~~~~~~---   80 (298)
T c1in8A_           7 SLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASE---LQTNIHVTSGPVLVKQGDMAAI---   80 (298)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHH---HTCCEEEEETTTCCSHHHHHHH---
T ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH---CCCCEEEEECCCCCCCHHHHHH---
T ss_conf             9778127099999999999998633888885799869889888999999997---0997999941553320124566---


Q ss_pred             CCCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEECCCEEEEEECCCCHHHHHHCCC
Q ss_conf             77766675434468376447981898325889999999999997229586768887300333899707999799987598
Q batch____       454 ERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADRE  533 (692)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~a~~gtl~l~~i~~l~~~~q~~l~~~l~~~~~~~~~~~~~~~~~~r~i~~~~~~l~~~~~~~~  533 (692)
                                    ......++.+|+++++.++.+.|..++..+++..       ......+.++.....+.........
T Consensus        81 --------------~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  139 (298)
T c1in8A_          81 --------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQ-------IDIQPFTLVGATVRSGLLSSPLRSR  139 (298)
T ss_dssp             --------------HHTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSC-------CCCCCCEEEEEESCGGGSCHHHHTT
T ss_pred             --------------HHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCC-------CCCCEEEECCCCCCHHHCCCHHHHH
T ss_conf             --------------8851379989994236769899999999970553-------3444066526545856314643323


Q ss_pred             CCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             61578972280389607723284559999999999999982779988898999998738978807899999999999678
Q batch____       534 FRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTR  613 (692)
Q Consensus       534 ~~~~l~~~l~~~~i~iPpLreR~eDi~~l~~~~l~~~~~~~~~~~~~~~~~a~~~L~~y~WpgN~~eL~~~i~~~~~~~~  613 (692)
                      +         ...+.+++..      ..-...++...+.+.+..   ++.++++.+..+ |+||+|++.+++++++..+.
T Consensus       140 ~---------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~-~~g~~R~~~~ll~~~~~~~~  200 (298)
T c1in8A_         140 F---------GIILELDFYT------VKELKEIIKRAASLMDVE---IEDAAAEMIAKR-SRGTPRIAIRLTKRVRDMLT  200 (298)
T ss_dssp             C---------SEEEECCCCC------HHHHHHHHHHHHHHTTCC---BCHHHHHHHHHT-STTCHHHHHHHHHHHHHHHH
T ss_pred             H---------HHHCCCCCCC------HHHHHHHHHHHHHHCCCC---CCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHH
T ss_conf             4---------4311367898------999999999999982985---588999999998-39998999999999999998


Q ss_pred             ---CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHC
Q ss_conf             ---98016343144103446665578478899999999999999937857767899988489988999999980
Q batch____       614 ---GNVLQLSLPDIVLPEPETPPAATVVALEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRL  684 (692)
Q Consensus       614 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~i~~al~~~~g~~~n~~~aA~~LGi~r~tl~rklk~~  684 (692)
                         ...|+...................     +.+++.+...+...+++.......|+.||++.+++..+++.+
T Consensus       201 ~~~~~~i~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~  269 (298)
T c1in8A_         201 VVKADRINTDIVLKTMEVLNIDDEGLD-----EFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPY  269 (298)
T ss_dssp             HHTCSSBCHHHHHHHHHHHTCCTTCCC-----HHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHHHHHHTTHHH
T ss_pred             HCCCCCCCHHHHHHHHHHHCCCCHHHH-----HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             529887698999999975125510111-----468999999999817695479999998599989999997657