464 c1a1vA_ Probab=85.57   E-value=2.3  Score=20.70  Aligned_columns=116  Identities=20%

Q ss_pred             HCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH--HHHCCCCCCCCCCCCCCCC---------
Q ss_conf             60789979998889986899999998606546887699983438987988--8863867776667543446---------
Q batch____       398 VAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLE--SDLFGHERGAFTGASAQRI---------  466 (692)
Q Consensus       398 ~a~~~~pvli~Ge~GtGK~~~A~~ih~~s~~~~~~~~~i~c~~~~~~~~~--~~l~g~~~~~~~~~~~~~~---------  466 (692)
                      +++.+..++|.+++|+||+  ..+.-........-++..--..+-.+..+  +.++|..-+...+......         
T Consensus         4 ~~~~~q~~il~apTGsGKT--~~~~~~~~~~g~~vlvl~P~r~La~~~~~~l~~~~g~~~~~~~~~~~~~~~~~I~v~T~   81 (429)
T c1a1vA_           4 VPQSFQVAHLHAPTGSGKS--TKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTY   81 (429)
T ss_dssp             CCSSCEEEEEECCTTSCTT--THHHHHHHTTTCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEEEEH
T ss_pred             CCCCCCEEEEECCCCCCHH--HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCEEEECC
T ss_conf             4001976999858988788--99999999779779998463899899999999751845012216476147986899971


Q ss_pred             -----CHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEECCCEEEEEECCCC
Q ss_conf             -----8376447981898325889999999999997229586768887300333899707999
Q batch____       467 -----GRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRD  524 (692)
Q Consensus       467 -----~~~~~a~~gtl~l~~i~~l~~~~q~~l~~~l~~~~~~~~~~~~~~~~~~r~i~~~~~~  524 (692)
                           +.....+-+++++||+|.++...-..+...+....         ...+.++|..|...
T Consensus        82 ~~ll~~~~~l~~~~~VIiDEaH~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~SAT~  135 (429)
T c1a1vA_          82 GKFLADGGSGGAYDIIICDECHSTDATSILGIGTVLDQAE---------TAGARLVVLATATP  135 (429)
T ss_dssp             HHHHHTTCCCCCCSEEEEETTTCCSHHHHHHHHHHHHHTT---------TTTCSEEEEEESSC
T ss_pred             CHHHCCCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHH---------CCCCCEEEEEECCC
T ss_conf             1874374202673179830452034222125688887631---------18883799981485