Phyre 2 alignment of P0AFW8 with c2eayB_

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Job Description | P0AFW8
Confidence | 4.99% | Date | Thu Jan 5 11:27:27 GMT 2012
Rank | 60 | Aligned Residues | 47
% Identity | 13% | Template | c2eayB_
PDB info | PDB header:ligase | Chain: B: PDB Molecule:biotin [acetyl-coa-carboxylase] ligase; | PDBTitle: crystal structure of biotin protein ligase from aquifex2 aeolicus
Resolution | 1.95 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | Y | D | N | L | E | L | A | C | Q | H | H | L | M | L | T | L | E | L | K | D | G | E | K | L | Q | A | K | A | S | D | L | V | S | R | K | N | V | E | Y | L | V | V | E | A | A | G | E | T | R | E | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | G | K | I | E | S | K | X | L | Y | L | G | E | E | V | K | L | . | . | L | G | E | G | K | I | T | G | K | L | V | G | L | S | E | K | G | G | . | . | . | A | L | I | L | T | E | E | G | I | K | E | I
Template Known Secondary structure |  |  |  |  |  |  |  | T | B | T | T | T | T | S |  |  |  |  | . | . |  | S | S | S |  |  |  |  |  |  |  |  |  |  | T | T | S |  | . | . | . |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |  |  | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |  |  |  | . | . | . | . | . | . | . | . | 220 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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