Phyre 2 alignment of P0AFW8 with c1b34A_

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Job Description | P0AFW8
Confidence | 30.68% | Date | Thu Jan 5 11:27:27 GMT 2012
Rank | 8 | Aligned Residues | 26
% Identity | 27% | Template | c1b34A_
PDB info | PDB header:rna binding protein | Chain: A: PDB Molecule:protein (small nuclear ribonucleoprotein sm d1); | PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .
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Query Sequence |  | L | A | C | Q | H | H | L | M | L | T | L | E | L | K | D | G | E | K | L | Q | A | K | A | S | D | L
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Template Sequence |  | L | M | K | L | S | H | E | T | V | T | I | E | L | K | N | G | T | Q | V | H | G | T | I | T | G | V
Template Known Secondary structure |  |  |  | T |  | T | T |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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