61 d1pama4 Probab=100.00  E-value=0  Score=496.11  Aligned_columns=360  Identities=19%

Q ss_pred             CCCCCCCCCCCCCEEEEEECHHCCCCCC---------------------CCHHHHHHHHH--HHHHCCCCEEEECCCCCC
Q ss_conf             2446886647466699981012156887---------------------77888998658--899739989998476358
Q batch____        36 ITQRRKKHWDESDVVLITYADQFHSNDL---------------------KPLPTFNQFYH--QWLQSIFSHVHLLPFYPW   92 (559)
Q Consensus        36 ~~~~~~~~w~~~~viy~i~~~~f~~~~~---------------------~~l~~~~~~Ld--yL~~LGv~~i~L~Pif~s   92 (559)
                      ++....+.|++++|||||+|+||++++.                     |||+|+++|||  ||++||||+||||||+++
T Consensus         3 ~~~~~~~~w~~~~viY~i~~~~F~~~d~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLD~~YLk~LGv~~I~L~Pi~~~   82 (406)
T d1pama4           3 DTSVSNKQNFSTDVIYQIFTDRFSDGNPANNPTGAAFDGSCTNLRLYCGGDWQGIINKINDGYLTGMGITAIWISQPVEN   82 (406)
T ss_dssp             TTSTTCCSCCTTCCEEECCGGGTCCSCGGGCCCGGGBCTTCCSTTSBCCCCHHHHHHHHHTTTTGGGTCCEEEECCCEEE
T ss_pred             CCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCCCCC
T ss_conf             88888833530282899821113577867676666666676665564688689999744988899629989998776346


Q ss_pred             C------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCE-----EEEEECCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf             8------------8888563622334755589999998887152-----9998624313786456888640488778706
Q batch____        93 S------------SDDGFSVIDYHQVASEAGEWQDIQQLGECSH-----LMFDFVCNHMSAKSEWFKNYLQQHPGFEDFF  155 (559)
Q Consensus        93 ~------------~d~GYd~~dy~~idp~~Gt~edlk~Lv~~~h-----VilD~V~NHts~~~~wf~~~~~~~~~~~d~y  155 (559)
                      +            ++|||+++||++|||+|||++|||+||++||     ||||+|+||||.+|+|++...+....+.+++
T Consensus        83 ~~~~~~~~~~~~~~~~GY~~~d~~~id~~~Gt~~dfk~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~  162 (406)
T d1pama4          83 IYSVINYSGVNNTAYHGYWARDFKKTNPAYGTMQDFKNLIDTAHAHNIKVIIDFAPNHTSPASSDDPSFAENGRLYDNGN  162 (406)
T ss_dssp             CCCCEEETTEEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCC
T ss_conf             55444556667677777465745433734389999999999998789899997604524687632100002465556766


Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHC
Q ss_conf             85288878776634555788687432576673573167776621379899999999999999982699799987845313
Q batch____       156 IAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMW  235 (559)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl~~gvDGfRlD~v~~i~  235 (559)
                      .+.....+       ........+........+.++.+..++||||++||+|++++++++++|+++||||||+|++.++ 
T Consensus       163 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~~~~~~~~w~e~giDGfR~D~~~~~-  234 (406)
T d1pama4         163 LLGGYTND-------TQNLFHHYGGTDFSTIENGIYKNLYDLADLNHNNSSVDVYLKDAIKMWLDLGVDGIRVDAVKHM-  234 (406)
T ss_dssp             EEECSTTC-------TTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGS-
T ss_pred             CCCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHC-
T ss_conf             46667766-------6673466677777776762006855354315898899999999999998449978887575658-


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHCCCCH---
Q ss_conf             34576666771079999999999976489869995135770666554158-76563201380578888763215778---
Q batch____       236 KEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGA-GDDEAHMVYQFSLPPLVLHAVQKQNV---  311 (559)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~p~~~~igE~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---  311 (559)
                                  ...+++++++.+++. +++++++|++....+....+.. .....++.+++.+...+...+.....   
T Consensus       235 ------------~~~~~~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (406)
T d1pama4         235 ------------PFGWQKSFMATINNY-KPVFTFGEWFLGVNEISPEYHQFANESGMSLLDFRFAQKARQVFRDNTDNMY  301 (406)
T ss_dssp             ------------CHHHHHHHHHHHHHH-SCCEEEECCCCCTTCCCHHHHHHHHHSSSEEBCHHHHHHHHHHHTTCSSCHH
T ss_pred             ------------CHHHHHHHHHHHHHC-CCEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCHH
T ss_conf             ------------989999999998515-9639998311675245346652366677122071799999999708887789


Q ss_pred             HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999997500234666034310344466423333345678898888531035824653057676653432465544432
Q batch____       312 EALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDAL  391 (559)
Q Consensus       312 ~~l~~~~~~~~~~~~~~~~~~fl~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  391 (559)
                      ...................++|++|||..|.....+.                                           
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~-------------------------------------------  338 (406)
T d1pama4         302 GLKAMLEGSEVDYAQVNDQVTFIDNHDMERFHTSNGD-------------------------------------------  338 (406)
T ss_dssp             HHHHHHHHHHHHSTTGGGCEECSCCTTSCCSCCTTSC-------------------------------------------
T ss_pred             HHHHHHHHHHHHCCCHHHCEEECCCCCCCHHHHHCCC-------------------------------------------
T ss_conf             9999985234315670210431678762235430582-------------------------------------------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
Q ss_conf             34677438899999978889998089606946744787578888766788986546548845766676430246016999
Q batch____       392 SRRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYH  471 (559)
Q Consensus       392 ~~~~~~~~~~~~r~~la~~l~lt~pG~P~iyyGdE~g~~~~~~~~~~~g~~~~~~r~~~~w~~~~~~~~~~~~~~~~l~~  471 (559)
                                .+++++|++++||+||+||||||||+|++         |...+.+|.+|+|          .....++++
T Consensus       339 ----------~~~~~~a~~~~~~~pG~P~iy~G~E~g~~---------g~~d~~~r~~~~~----------~~~~~~~~~  389 (406)
T d1pama4         339 ----------RRKLEQALAFTLTSRGVPAIYYGSEQYMS---------GGNDPDNRARLPS----------FSTTTTAYQ  389 (406)
T ss_dssp             ----------HHHHHHHHHHHHHSSSEEEEETTGGGTCC---------CCSTTGGGCCCCC----------CCSCSHHHH
T ss_pred             ----------HHHHHHHHHHHHHHCCCEEEECCHHCCCC---------CCCCHHHCCCCCC----------CCCCHHHHH
T ss_conf             ----------89999999999982897198767101507---------8856322454788----------756418999


Q ss_pred             HHHHHHHHHHHCHHHCC
Q ss_conf             99999999874810207
Q batch____       472 ELSRLITLRRSHNEFHP  488 (559)
Q Consensus       472 ~~r~Li~lRk~~pal~~  488 (559)
                      ++|+|++|||++|||++
T Consensus       390 ~~~~L~~lR~~~paL~~  406 (406)
T d1pama4         390 VIQKLAPLRKSNPAIAY  406 (406)
T ss_dssp             HHHHHTTHHHHCHHHHC
T ss_pred             HHHHHHHHHHHCCCCCC
T ss_conf             99999999987621359


