115 c3mi6A_ Probab=98.33   E-value=0.00021  Score=44.97  Aligned_columns=359  Identities=17%

Q ss_pred             CCCHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEECHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC-CCCCC
Q ss_conf             43146799986035653320244688664746669998101215688777888998658899739989998476-35888
Q batch____        16 TFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVLITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPF-YPWSS   94 (559)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~viy~i~~~~f~~~~~~~l~~~~~~LdyL~~LGv~~i~L~Pi-f~s~~   94 (559)
                      .++.+.+.++-.+.+...|.-..+.+..=..-.|+|-..-...++-+   .+.+.+-.+..+++||....|=== |....
T Consensus       298 ~~s~~gl~~~s~~~h~~~r~~~~~~~~~~~~rPV~~NsWea~yfd~~---~~~l~~la~~Aa~lG~E~fVlDDGWf~~r~  374 (742)
T c3mi6A_         298 SYTSAGXNQLSQQXASFYQQHLVNPRFAHEERPVLINNWEATYFDFN---EAKLXTIVNQAKRLGIEXFVLDDGWFGHRD  374 (742)
T ss_dssp             EEESBCHHHHHHHHHHHHHHHTSCTTTTTSCCCCEEECHHHHTTCCC---HHHHHHHHHHHHHHTCCEEEECTTCBTTCS
T ss_pred             EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEECCC---HHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             99658656888879999996315776544578779986521121078---999999999998769719997022236888


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHCE-----EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf             888563622334755589999998887152-----999862431378645688864048877870685288878776634
Q batch____        95 DDGFSVIDYHQVASEAGEWQDIQQLGECSH-----LMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTR  169 (559)
Q Consensus        95 d~GYd~~dy~~idp~~Gt~edlk~Lv~~~h-----VilD~V~NHts~~~~wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~  169 (559)
                      |+-=..-|+..=..+|..  .|+.|++.+|     .-|=+-+-=++.+++.+++       ++||.+..+........  
T Consensus       375 dd~~~LGDW~~~~~kfP~--Gl~~l~d~v~~~Gm~fGlW~EPEmV~~~S~ly~~-------HPDw~l~~~~~~~~~~r--  443 (742)
T c3mi6A_         375 DDTTSLGDWFVDQRKFPD--GIEHFSQAVHQQGXKFGLWFEPEXVSVDSDLYQQ-------HPDWLIHAPKSTPTPGR--  443 (742)
T ss_dssp             STTSCTTCCSBCTTTCTT--HHHHHHHHHHHTTCEEEEEECTTEECSSSSHHHH-------CGGGBCCCTTCCCCCSS--
T ss_pred             CCCCCCCCEEECHHHCCC--CHHHHHHHHHHCCCCCEEEECHHHCCCCCHHHHH-------CCCEEEECCCCCCCCCC--
T ss_conf             853224312447658288--2799999999739832487501325887378885-------96416863897401357--


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCHHHHCCCCCCCCCCCC--
Q ss_conf             55578868743257667357316777662137989999999999999998-269979998784531334576666771--
Q batch____       170 PRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYL-AKGAEYVRLDAVGFMWKEPGTSCIHLE--  246 (559)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~gvDGfRlD~v~~i~~~~~~~~~~~~--  246 (559)
                                                .|--||..||+|++++++.+.-.+ +.|||.+..|....+............  
T Consensus       444 --------------------------~q~vLDl~~P~v~~~i~~~i~~ll~e~gidYiKwD~Nr~~~~~~~~~~~~~~~~  497 (742)
T c3mi6A_         444 --------------------------HQFVLDXARPEVVDYLFKLXSQXIESANLDYIKWDXNRYATEXFSSRLTSDQQL  497 (742)
T ss_dssp             --------------------------SCEEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCSCCCSCCCSSSCGGGGG
T ss_pred             --------------------------CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCC
T ss_conf             --------------------------528985788899999998788887754972599606653010145667643220


Q ss_pred             ----CHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf             ----0799999999999764898699951357706665541587656320138057888876321577899999997500
Q batch____       247 ----KTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLT  322 (559)
Q Consensus       247 ----~~~~~~~~~r~~~~~~~p~~~~igE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  322 (559)
                          ....-+-.+-+.+.+..|++++-.-.            .++..++..+ .......|.+-.+.....+.-......
T Consensus       498 ~~~~~~~~g~y~~ld~L~~~~P~v~iE~Cs------------sGGgR~D~g~-l~~~~~~w~SD~tda~~R~~Iq~g~s~  564 (742)
T c3mi6A_         498 ELPHRYILGVYQLYARLTQAYPNVLFESCA------------SGGGRFDLGX-XYYAPQAWTSDDTDAAERLLIQFGTSY  564 (742)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHCTTCEEEECS------------TTTSSCSHHH-HHHSSEEECCSCCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEEEEC------------CCCCCCCHHH-HCCCCEEECCCCCCHHHHHHHHCCCCC
T ss_conf             258999999999999998758974999214------------8875447266-402761210777455468998708311


Q ss_pred             CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             23466603431034446642333334567889888853103582465305767665343246554443234677438899
Q batch____       323 LPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERC  402 (559)
Q Consensus       323 ~~~~~~~~~~fl~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (559)
                      ..+....                                   +.-+.-..+|...|...                     
T Consensus       565 ~~P~~~~-----------------------------------~~hv~~~p~h~t~r~~~---------------------  588 (742)
T c3mi6A_         565 GYPQAXX-----------------------------------GAHVSAVPNDQXGRITS---------------------  588 (742)
T ss_dssp             TSCGGGE-----------------------------------EEEEECSSCTTTCCCCC---------------------
T ss_pred             CCCHHHC-----------------------------------CCCEEECCCCCCCCCCC---------------------
T ss_conf             4785561-----------------------------------23120077644465431---------------------


Q ss_pred             HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99997888999808960694674478757888876678898654654884576667643024601699999999999874
Q batch____       403 ARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRRS  482 (559)
Q Consensus       403 ~r~~la~~l~lt~pG~P~iyyGdE~g~~~~~~~~~~~g~~~~~~r~~~~w~~~~~~~~~~~~~~~~l~~~~r~Li~lRk~  482 (559)
                          +..-+..++-|...+=.                                     +......+..+.+|+.|++.|+
T Consensus       589 ----l~~r~~val~g~~g~~~-------------------------------------dl~~l~~~e~~~l~~~i~~yK~  627 (742)
T c3mi6A_         589 ----LKTRGAVAFFGDLGYEL-------------------------------------DITKXAPTELDQVKKQVAFYKC  627 (742)
T ss_dssp             ----HHHHHHHHTSSEEEEES-------------------------------------CSTTCCHHHHHHHHHHHHHHHH
T ss_pred             ----HHEEEHHHHCCCCCCCC-------------------------------------CCCCCCHHHHHHHHHHHHHHHH
T ss_conf             ----00000122103421202-------------------------------------0110899899999999999886


Q ss_pred             C-HHHCCCCEEEEECC---CCCEEEEEEEECCCCE-EEEEEECCCCC
Q ss_conf             8-10207967999838---9968999998389778-99999677987
Q batch____       483 H-NEFHPDNNFTIDTI---NSSVMRIPRSNADGNC-LTGLFNVSKNI  524 (559)
Q Consensus       483 ~-pal~~g~~~~~~~~---~~~v~a~~R~~~~~~~-~ivv~N~s~~~  524 (559)
                      + +.++.|.+..+...   +++..++.-...+++. ++++++....+
T Consensus       628 ~R~ll~~G~~~rl~~p~~~~~~~~a~~~v~~d~~~~v~~~~~~~~~~  674 (742)
T c3mi6A_         628 YRQLFQFGKFYRIDSPFVEDGNVTSWQVVSDDQKQAIAARYQLLNHP  674 (742)
T ss_dssp             THHHHHHSEEEECSCTTSTTCCEEEEEEECTTSSEEEEEEEESSCCS
T ss_pred             HHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
T ss_conf             50777645589840667788772399999778886999999716788


