45 c3amlA_ Probab=100.00  E-value=0  Score=505.76  Aligned_columns=467  Identities=12%

Q ss_pred             CHHHHHHCCCCCCCCCCCCCCEEEEEECHHCCC-CCCCCHHHHHHH-HHHHHHCCCCEEEECCC--CCCCCCCCCCCCCC
Q ss_conf             356533202446886647466699981012156-887778889986-58899739989998476--35888888563622
Q batch____        28 RLESAKRLITQRRKKHWDESDVVLITYADQFHS-NDLKPLPTFNQF-YHQWLQSIFSHVHLLPF--YPWSSDDGFSVIDY  103 (559)
Q Consensus        28 ~~~~~~~~~~~~~~~~w~~~~viy~i~~~~f~~-~~~~~l~~~~~~-LdyL~~LGv~~i~L~Pi--f~s~~d~GYd~~dy  103 (559)
                      +.........+...+.=.++.||||+|+++|+. +..+++++++++ ||||++||||+||||||  |++..+|||++++|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~IYE~hv~~~~~~~~~g~~~~~~~~~l~ylk~LGvt~I~LmPv~e~~~~~~wGY~~~~y  234 (693)
T c3amlA_         155 DPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNF  234 (693)
T ss_dssp             CCCGGGCCCCCSCCCCCCSSCEEEEEESTTCSSSSSCCCHHHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             88631112223777788555538997404347888768899999865388997499899990761689988847666523


Q ss_pred             CCCCCCCCCHHHHHHHHHHCE-----EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             334755589999998887152-----999862431378645688864048877870685288878776634555788687
Q batch____       104 HQVASEAGEWQDIQQLGECSH-----LMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTP  178 (559)
Q Consensus       104 ~~idp~~Gt~edlk~Lv~~~h-----VilD~V~NHts~~~~wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~~~~~~~~  178 (559)
                      ++|+|+|||++|||+||++||     ||||+|+||||.+|+|+........+...+|+..++.......           
T Consensus       235 ~a~~~~yGt~~dlk~LVd~aH~~GI~VIlDvV~NH~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~w-----------  303 (693)
T c3amlA_         235 FAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLW-----------  303 (693)
T ss_dssp             EEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSGGGGCSSCCGGGSSBCCGGGGEETTT-----------
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC-----------
T ss_conf             550777889999999999999989879999801434787510347640788862123326898625788-----------


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCHHHH-------------CCCCCCCCCC
Q ss_conf             43257667357316777662137989999999999999998-269979998784531-------------3345766667
Q batch____       179 FQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYL-AKGAEYVRLDAVGFM-------------WKEPGTSCIH  244 (559)
Q Consensus       179 ~~~~~~~~~~~~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~gvDGfRlD~v~~i-------------~~~~~~~~~~  244 (559)
                                       +.++||++||+|+++|+++++||+ ++||||||+|+|++|             ..........
T Consensus       304 -----------------~~~~~n~~~p~V~~~i~d~~~~Wi~ey~iDGfR~Dav~~i~~~~~~~~~~~~~~~~~~~~~~~  366 (693)
T c3amlA_         304 -----------------DSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLDT  366 (693)
T ss_dssp             -----------------TEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTHHHHHBTTTTTTCCCCSCGGGTSSTTB
T ss_pred             -----------------CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             -----------------862116889999999999999999980898067721332011355566555445554446656


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC--CHHHHHHHHHHCC
Q ss_conf             71079999999999976489869995135770666554158765632013805788887632157--7899999997500
Q batch____       245 LEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQ--NVEALCAWAQNLT  322 (559)
Q Consensus       245 ~~~~~~~~~~~r~~~~~~~p~~~~igE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~  322 (559)
                      ..+...|+++++..+++.+|+++++||.+...+...+....++.+++..+++.++..+...+...  ....+........
T Consensus       367 ~~~~~~fl~~~~~~v~~~~p~~~~iaE~~~~~~~~~~~~~~gg~gfd~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (693)
T c3amlA_         367 DVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFRLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLT  446 (693)
T ss_dssp             CHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCTTTTSCGGGTSCCCSEEECTTHHHHHHHHHHHCCGGGCCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             65568999999999988679879994004885655100115897413040807888999986468530135888887763


Q ss_pred             CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             23466603431034446642333334567889888853103582465305767665343246554443234677438899
Q batch____       323 LPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERC  402 (559)
Q Consensus       323 ~~~~~~~~~~fl~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (559)
                      ........++|++|||+.+.........................                           ....+....
T Consensus       447 ~~~~~~~~i~y~esHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~  499 (693)
T c3amlA_         447 NRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPA---------------------------SPTINRGIA  499 (693)
T ss_dssp             CSCTTSCEEECSCCCCTTSCCCBCHHHHHHTTHHHHSCBSSSCC---------------------------CHHHHHHHH
T ss_pred             CCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC---------------------------CCHHHHHHH
T ss_conf             16770105884134886400420002457780100010046777---------------------------745889999


Q ss_pred             HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99997888999808960694674478757888876678898654654884576667643024601699999999999874
Q batch____       403 ARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRRS  482 (559)
Q Consensus       403 ~r~~la~~l~lt~pG~P~iyyGdE~g~~~~~~~~~~~g~~~~~~r~~~~w~~~~~~~~~~~~~~~~l~~~~r~Li~lRk~  482 (559)
                      .+.+++++++++.+|+||||||+|+|+++..+ ....+.....++.+++|+..+    ++....+.++++||+|++||++
T Consensus       500 ~~~~~a~~~~~~~~g~Pliy~G~EfG~~~~~d-~~~~~~~~~~~~~~~~w~~~~----~~~~~~~~L~~~~k~Li~LR~~  574 (693)
T c3amlA_         500 LQKMIHFITMALGGDGYLNFMGNEFGHPEWID-FPREGNNWSYDKCRRQWSLVD----TDHLRYKYMNAFDQAMNALEEE  574 (693)
T ss_dssp             HHHHHHHHHHHHHCSEEEEETTGGGTCCSBCC-CCCGGGTTCCTTSSCCHHHHH----CTTBSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999998089803998570115768888-877677775433546655321----1014305899999999999874


Q ss_pred             CHHHCCCCEEEEECCCCC-EEEEEEEECCCCEEEEEEECCCCCEEEECC-----CCCCEEEE------------------
Q ss_conf             810207967999838996-899999838977899999677987899806-----76425644------------------
Q batch____       483 HNEFHPDNNFTIDTINSS-VMRIPRSNADGNCLTGLFNVSKNIQHVNIT-----NLHGRDLI------------------  538 (559)
Q Consensus       483 ~pal~~g~~~~~~~~~~~-v~a~~R~~~~~~~~ivv~N~s~~~~~~~l~-----~~~~~~l~------------------  538 (559)
                      +|+|+.|........+++ |+||.|..     +|||+|+++.++..+..     ...+..++                  
T Consensus       575 ~p~L~~g~~~~~~~~~~~~Vlaf~R~~-----llvV~N~~~~~~~~~~~i~~~~~G~y~~ilnsd~~~fgG~~~~~~~~~  649 (693)
T c3amlA_         575 FSFLSSSKQIVSDMNEKDKVIVFERGD-----LVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRVGHDVD  649 (693)
T ss_dssp             HCGGGCCCEEEEEEETTTTEEEEEETT-----EEEEEECCSSCCEEEEEEEESSCSEEEEEEETTSGGGTSCCCSCTTCC
T ss_pred             CCCCCCCCEEEEEECCCCCEEEEEECC-----EEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             830107837999751898499999889-----899997658842311671268996389997078411076565666664


Q ss_pred             ---------------CCEECCCCEEEECCCEEEEEC
Q ss_conf             ---------------473446983897886289959
Q batch____       539 ---------------SEVDILGNEITLRPWQVMWIK  559 (559)
Q Consensus       539 ---------------~~~~~~~~~l~L~Py~~~wlk  559 (559)
                                     ....-..-+|+|||.++++|+
T Consensus       650 ~~~~~~~~~~~~~~~~~g~~~s~~vtlP~~s~vVl~  685 (693)
T c3amlA_         650 HFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYY  685 (693)
T ss_dssp             EECEECSCTTCGGGSBTTBSEEEEEEECTTEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEE
T ss_conf             444555555555331157552189995883589999


