42 c3amkA_ Probab=100.00  E-value=0  Score=511.10  Aligned_columns=461  Identities=14%

Q ss_pred             CHHHHHHCCCCCCCCCCCCCCEEEEEECHHCCC-CCCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCC--CCCCCCCCCC
Q ss_conf             356533202446886647466699981012156-887778889986-588997399899984763588--8888563622
Q batch____        28 RLESAKRLITQRRKKHWDESDVVLITYADQFHS-NDLKPLPTFNQF-YHQWLQSIFSHVHLLPFYPWS--SDDGFSVIDY  103 (559)
Q Consensus        28 ~~~~~~~~~~~~~~~~w~~~~viy~i~~~~f~~-~~~~~l~~~~~~-LdyL~~LGv~~i~L~Pif~s~--~d~GYd~~dy  103 (559)
                      +.........+..++...+..||||+|++.|+. +..+++.+++++ ||||++||||+||||||++.+  .+|||+++||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~iYE~hv~~~~~~~~~~~~~~~~~~~l~ylk~LGvt~I~LmPi~e~~~~~~wGY~~~~y  235 (675)
T c3amkA_         156 DPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNF  235 (675)
T ss_dssp             CCCGGGSCCCCSCCCCCCSSCEEEEECSTTCSSSSSCCCHHHHHHHTHHHHHHTTCCEEEECSCEECSCGGGTTCSCSEE
T ss_pred             CCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             88720000024778887545648998522247898747589999989899997599799984862688989857655523


Q ss_pred             CCCCCCCCCHHHHHHHHHHCE-----EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             334755589999998887152-----999862431378645688864048877870685288878776634555788687
Q batch____       104 HQVASEAGEWQDIQQLGECSH-----LMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTP  178 (559)
Q Consensus       104 ~~idp~~Gt~edlk~Lv~~~h-----VilD~V~NHts~~~~wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~~~~~~~~  178 (559)
                      ++|+|+|||++|||+||++||     ||||+|+|||+.+|+|+........+...+|+..+........           
T Consensus       236 ~av~~~yGt~~dfk~LVd~~H~~GI~VIlDvV~NH~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~w-----------  304 (675)
T c3amkA_         236 FAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLW-----------  304 (675)
T ss_dssp             EEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCEECCTTTSGGGGCSSCCGGGSSBCCGGGGEETTT-----------
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC-----------
T ss_conf             560766789999999999999889889999712535785300445311688874233416887616789-----------


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCHHHHCCCCCCCCC-------------C
Q ss_conf             43257667357316777662137989999999999999998-269979998784531334576666-------------7
Q batch____       179 FQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYL-AKGAEYVRLDAVGFMWKEPGTSCI-------------H  244 (559)
Q Consensus       179 ~~~~~~~~~~~~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~gvDGfRlD~v~~i~~~~~~~~~-------------~  244 (559)
                                       +.+++|++||+||++|+++++||+ ++||||||+|+|++|.........             .
T Consensus       305 -----------------~~~~~n~~~p~Vr~~i~d~~~~Wi~eygIDGfR~Dav~~m~~~~~~~~~~~~~~~~~~~~~~~  367 (675)
T c3amkA_         305 -----------------DSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLDT  367 (675)
T ss_dssp             -----------------TEECBCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTHHHHHBTTTTTTCCCCSCHHHHSSTTB
T ss_pred             -----------------CCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             -----------------852117989999999999999999862998999864553032334565544444433346656


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC--CHHHHHHHHHHCC
Q ss_conf             71079999999999976489869995135770666554158765632013805788887632157--7899999997500
Q batch____       245 LEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQ--NVEALCAWAQNLT  322 (559)
Q Consensus       245 ~~~~~~~~~~~r~~~~~~~p~~~~igE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~  322 (559)
                      ..+.++++++++..+++.+|+++++||.+...+...+....++.+++..+++.++..+...+...  ....+........
T Consensus       368 ~~~~~~fl~~~~~~i~~~~p~~~~iaE~~~~~~~~~~~~~~gg~gfd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (675)
T c3amkA_         368 DVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFRLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLT  447 (675)
T ss_dssp             CHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCTTTTSCGGGTSCCCSEEECTTHHHHHHHHHHHCCGGGCCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             63358999999999988669869997440786345000114798701011736889999986348530136888886662


Q ss_pred             CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             23466603431034446642333334567889888853103582465305767665343246554443234677438899
Q batch____       323 LPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERC  402 (559)
Q Consensus       323 ~~~~~~~~~~fl~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (559)
                      ........++|++|||+.+..............                                 ..+...........
T Consensus       448 ~~~~~~~~v~f~enHD~~r~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~  494 (675)
T c3amkA_         448 NRRYTEKCIAYAESHDDKTIAFLLMDKEMYTGM---------------------------------SDLQPASPTINRGI  494 (675)
T ss_dssp             CSCTTSCEEBCSCCCCCCCHHHHHHGGGHHHHT---------------------------------BTTSCCCHHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCC---------------------------------CCCCCCCCCHHHHH
T ss_conf             376820169961006866200012632331000---------------------------------02445786779999


Q ss_pred             HHHHHHHHHHHHCCCCC-EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99997888999808960-69467447875788887667889865465488457666764302460169999999999987
Q batch____       403 ARFILAHAILLSFPGVP-AIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRR  481 (559)
Q Consensus       403 ~r~~la~~l~lt~pG~P-~iyyGdE~g~~~~~~~~~~~g~~~~~~r~~~~w~~~~~~~~~~~~~~~~l~~~~r~Li~lRk  481 (559)
                      ++.++++++++++||+| |||||+|+|+ ..+......+.....++.+++|+..+    ++.....++++++|+|++|||
T Consensus       495 ~~~kl~~~~~l~~~G~p~liy~G~E~G~-~~~~d~~~~~~~~~~~~~~~~w~~~~----~~~~~~~~L~~f~k~Li~LRk  569 (675)
T c3amkA_         495 ALQKMIHFITMALGGDGYLNFMGNEFGH-PEWIDFPREGNNWSYDKCRRQWSLVD----TDHLRYKYMNAFDQAMNALEE  569 (675)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEETTGGGTC-CSCCCCCCGGGTSCCTTSSCCHHHHH----CTTBSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHH
T ss_conf             9999999999994898317840101146-57888654576888554665877533----333323799999999999987


Q ss_pred             HCHHHCCCCEEEEECCCCC-EEEEEEEECCCCEEEEEEECCCCCEEEECC-----CCCCEEEECCEECCCC---------
Q ss_conf             4810207967999838996-899999838977899999677987899806-----7642564447344698---------
Q batch____       482 SHNEFHPDNNFTIDTINSS-VMRIPRSNADGNCLTGLFNVSKNIQHVNIT-----NLHGRDLISEVDILGN---------  546 (559)
Q Consensus       482 ~~pal~~g~~~~~~~~~~~-v~a~~R~~~~~~~~ivv~N~s~~~~~~~l~-----~~~~~~l~~~~~~~~~---------  546 (559)
                      ++|+|+.|........+++ |+||.|     ..++||+|++++++.....     ...+..++......-+         
T Consensus       570 ~~paL~~g~~~~~~~~~~~~Viaf~R-----~~llvV~N~~~~~~~~~~~i~~p~~G~y~~ilnSd~~~ygG~~~~~~~~  644 (675)
T c3amkA_         570 EFSFLSSSKQIVSDMNEKDKVIVFER-----GDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRVGHDV  644 (675)
T ss_dssp             HHCGGGCCCEEEEEEETTTTEEEEEE-----TTEEEEEECCSSCCEEEEEEEESSCSEEEEEEETTSGGGTCCCCSCSSC
T ss_pred             HCCCCCCCCEEEEEECCCCCEEEEEE-----CCEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCHHCCCCCCCCCCC
T ss_conf             48302078289996338984999998-----8889999764985243378432899659998507520308877566652


Q ss_pred             ---------------EEEECCCEEEEEC
Q ss_conf             ---------------3897886289959
Q batch____       547 ---------------EITLRPWQVMWIK  559 (559)
Q Consensus       547 ---------------~l~L~Py~~~wlk  559 (559)
                                     +|+|||.++++|+
T Consensus       645 ~~~~~~~~~~~~~~~~i~lPp~s~~Vl~  672 (675)
T c3amkA_         645 DHFTSPEGMNRPNSFKVLSPPRTCVAYY  672 (675)
T ss_dssp             CEECEECCCCCSEEEEEEECTTEEEEEE
T ss_pred             CCCCCCCCCCCCCEEEEEECCCEEEEEE
T ss_conf             0014455478440289993892589998


