35 c1cygA_ Probab=100.00  E-value=0  Score=531.46  Aligned_columns=394  Identities=21%

Q ss_pred             CCCCCCCEEEEEECHHCCCCCC---------------------CCHHHHHHHHH--HHHHCCCCEEEECCCCC-------
Q ss_conf             6647466699981012156887---------------------77888998658--89973998999847635-------
Q batch____        42 KHWDESDVVLITYADQFHSNDL---------------------KPLPTFNQFYH--QWLQSIFSHVHLLPFYP-------   91 (559)
Q Consensus        42 ~~w~~~~viy~i~~~~f~~~~~---------------------~~l~~~~~~Ld--yL~~LGv~~i~L~Pif~-------   91 (559)
                      |.++++.|||||++|||.+|+.                     |||+|+++|||  ||++||||+|||||||+       
T Consensus         6 ~~~w~~~~iY~i~~drF~~g~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLd~pYl~~LGv~~i~l~P~~~~~~~~~~   85 (680)
T c1cygA_           6 KVNFTSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMN   85 (680)
T ss_dssp             TTCCTTCCEEEECGGGTCCSCGGGCCCGGGBCGGGCSTTSBCCCCHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCS
T ss_pred             HHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf             15641574699932001378888887665566676554441578599999762887799729989998775146665555


Q ss_pred             ----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCE-----EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCC
Q ss_conf             ----888888563622334755589999998887152-----99986243137864568886404887787068528887
Q batch____        92 ----WSSDDGFSVIDYHQVASEAGEWQDIQQLGECSH-----LMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQT  162 (559)
Q Consensus        92 ----s~~d~GYd~~dy~~idp~~Gt~edlk~Lv~~~h-----VilD~V~NHts~~~~wf~~~~~~~~~~~d~y~~~~~~~  162 (559)
                          ++++|||++.||++|||+|||++|||+||++||     ||||+|+||||.+|.|+..+......+++++.+.+...
T Consensus        86 ~~~~~~~~~GY~~~d~~~id~~~Gt~~dfk~lV~~aH~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (680)
T c1cygA_          86 DASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTN  165 (680)
T ss_dssp             SSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             66676777775656243356332899999999999998898899999623368877543200015734546530467887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCC
Q ss_conf             87766345557886874325766735731677766213798999999999999999826997999878453133457666
Q batch____       163 DLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMWKEPGTSC  242 (559)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl~~gvDGfRlD~v~~i~~~~~~~~  242 (559)
                      +....     +.....+.|.+.....+...|  ++||||++||+|+++|++++++|+++||||||||+++++        
T Consensus       166 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~dln~~n~~v~~~~~~~~~~w~~~giDGfR~D~~~~~--------  230 (680)
T c1cygA_         166 DANMY-----FHHNGGTTFSSLEDGIYRNLF--DLADLNHQNPVIDRYLKDAVKMWIDMGIDGIRMDAVKHM--------  230 (680)
T ss_dssp             CTTCC-----BCCSCBCCCSSHHHHHSSBST--TEEEBCTTSHHHHHHHHHHHHHHHTTTCCEEEESCGGGS--------
T ss_pred             CCCCC-----CCCCCCCCCCCCCCCEECCCC--CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC--------
T ss_conf             65665-----336688755665631005778--888546899999999999999998445883776141038--------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHCCC--CHHHHHHHHH
Q ss_conf             6771079999999999976489869995135770666554158-765632013805788887632157--7899999997
Q batch____       243 IHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGA-GDDEAHMVYQFSLPPLVLHAVQKQ--NVEALCAWAQ  319 (559)
Q Consensus       243 ~~~~~~~~~~~~~r~~~~~~~p~~~~igE~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~  319 (559)
                           ..+++++++..++..+| .++++|.+............ ........+++.+...+...+...  ....+...+.
T Consensus       231 -----~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (680)
T c1cygA_         231 -----PFGWQKSLMDEIDNYRP-VFTFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQ  304 (680)
T ss_dssp             -----CSHHHHHHHHHHHHHCC-CEEEECCCCCTTCCCHHHHHHHHHSSCEEBCHHHHHHHHHHHTTCSCCHHHHHHHHH
T ss_pred             -----CHHHHHHHHHHHHHHCC-EEEEEEEECCCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             -----99899999999862188-089998644775322013330367771454207999999986048778999999998


Q ss_pred             HCCCCCCCCCE-EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             50023466603-43103444664233333456788988885310358246530576766534324655444323467743
Q batch____       320 NLTLPSSNTTW-FNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSD  398 (559)
Q Consensus       320 ~~~~~~~~~~~-~~fl~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  398 (559)
                      ..........+ ++|++|||..|.....+.                                                  
T Consensus       305 ~~~~~~~~~~~~v~f~~nHD~~R~~~~~~~--------------------------------------------------  334 (680)
T c1cygA_         305 DTASAYDEVLDQVTFIDNHDMDRFMIDGGD--------------------------------------------------  334 (680)
T ss_dssp             HHHHHCTTGGGCEECSCCTTSCCSCCTTCC--------------------------------------------------
T ss_pred             HHHHHCCCCCCEEEECCCCCCCHHHHHCCC--------------------------------------------------
T ss_conf             876418862432896057875503231799--------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             88999999788899980896069467447875788887667889865465488457666764302460169999999999
Q batch____       399 EERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLIT  478 (559)
Q Consensus       399 ~~~~~r~~la~~l~lt~pG~P~iyyGdE~g~~~~~~~~~~~g~~~~~~r~~~~w~~~~~~~~~~~~~~~~l~~~~r~Li~  478 (559)
                         .+++++|++++|++||+||||||||+|+.         +...+.+|.+|.|          .....++++++|+|++
T Consensus       335 ---~~~~~~a~~~~l~~pG~P~iyyG~E~g~~---------~~~~~~~r~~~~~----------~~~~~~~~~~~~~L~~  392 (680)
T c1cygA_         335 ---PRKVDMALAVLLTSRGVPNIYYGTEQYMT---------GNGDPNNRKMMSS----------FNKNTRAYQVIQKLSS  392 (680)
T ss_dssp             ---THHHHHHHHHHHHSSSEEEEETTGGGTCC---------CCSTTGGGCCCCC----------CCSCSHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHCCCEEEECCEECCCC---------CCCCCCCCCCCCC----------CCCCCHHHHHHHHHHH
T ss_conf             ---99999999999990897199956352436---------8768654321588----------9888589999999999


Q ss_pred             HHHHCHHHCCCCEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEEECC
Q ss_conf             9874810207967999838996899999838977899999677987899806
Q batch____       479 LRRSHNEFHPDNNFTIDTINSSVMRIPRSNADGNCLTGLFNVSKNIQHVNIT  530 (559)
Q Consensus       479 lRk~~pal~~g~~~~~~~~~~~v~a~~R~~~~~~~~ivv~N~s~~~~~~~l~  530 (559)
                      |||++|+|+.|.+..+... +++++|.|+. +++.++|++|++.........
T Consensus       393 lR~~~~al~~G~~~~~~~~-~~v~af~R~~-~~~~~~v~~N~~~~~~~~~~~  442 (680)
T c1cygA_         393 LRRNNPALAYGDTEQRWIN-GDVYVYERQF-GKDVVLVAVNRSSSSNYSITG  442 (680)
T ss_dssp             HHHHCHHHHHCEEEEEEEC-SSEEEEEEEE-TTEEEEEEEECCSSCCEEECS
T ss_pred             HHHHCHHHHCCEEEEEEEC-CCEEEEEEEC-CCCEEEEECCCCCCCCCCCCC
T ss_conf             9876832215717899507-9489999962-994299840455555431122


