 |
| Job Description | P77569 | | Confidence | 85.00% | Date | Thu Jan 5 12:30:40 GMT 2012 |
| Rank | 395 | Aligned Residues | 33 |
| % Identity | 18% | Template | c2l0kA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:stage iii sporulation protein d; |
PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna
|
| Resolution | UNK |
|
|   |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | R | G | L | M | L | L | N | M | L | N | K | L | D | G | G | A | S | V | G | L | L | A | E | L | S | G | L | H | R | T | T | V | R | R |
| Query Conservation |   |
  |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|
|   |
|
|
|   |   | . | . |   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
E | R | T | I | K | I | G | K | Y | I | V | E | T | . |
. |
K | K | T | V | R | V | I | A | K | E | F | G | V | S | K | S | T | V | H | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|