41 c3ffhA_ Probab=99.97   E-value=5e-27  Score=181.63  Aligned_columns=327  Identities=18%

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
Q ss_conf             7899974888788739953788888-898999999999987378877535467799999999999999998471940029
Q batch____         6 PAQFRAQFPALQDAGVYLDSAATAL-KPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTI   84 (401)
Q Consensus         6 ~~~~r~~fp~l~~~~iyld~~~~~~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~lA~~~g~~~~~~i   84 (401)
                      .+++.+++..  ++.|.|+.+-... +|+.|.+++.+.+......+               +++|+.||+++|+ ++++|
T Consensus        17 ~~~~~~~~g~--~~~i~l~~n~np~~~~~~v~~a~~~~~~~~~~y~---------------~~Lr~~iA~~~gv-~~~~I   78 (354)
T c3ffhA_          17 EEEVXAELGL--TKITKLSSNENPLGTSKKVAAIQANSSVETEIYA---------------SSLRKEVADFYQL-EEEEL   78 (354)
T ss_dssp             HHHHHHTTTC--SCCEECSSCSCTTCCCHHHHHHHHTCCSCCCBCC---------------HHHHHHHHHHHTC-CGGGE
T ss_pred             HHHHHHHCCC--CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC---------------HHHHHHHHHHHCC-CHHHE
T ss_conf             8899985284--4328778976899999899999998630637885---------------4899999988288-98898


Q ss_pred             EEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCEE
Q ss_conf             99698899999999975312467551243036751356899987655269468864487876638789986324577300
Q batch____        85 VWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPRSRIL  164 (401)
Q Consensus        85 ~~t~g~t~a~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (401)
                      ++|+|+|+++++++..+    .+++|.|+++.++|++....+.    ..|..+..++.+..+..+.+..+......+...
T Consensus        79 ~~t~G~t~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (354)
T c3ffhA_          79 IFTAGVDELIELLTRVL----LDTTTNTVXATPTFVQYRQNAL----IEGAEVREIPLLQDGEHDLEGXLNAIDEKTTIV  150 (354)
T ss_dssp             EEESSHHHHHHHHHHHH----CSTTCEEEEEESSCHHHHHHHH----HHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEE
T ss_pred             EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHH----HCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC
T ss_conf             87188899999999996----2799899904987278999999----849868898605434654256676301234322


Q ss_pred             ECCCCCCCCCCCCH---HHHHHHHHCCCCCCCCCCCCCCCCCC-----CCCCCCCCCEEEEEECCCCCCCCC--CEEEEE
Q ss_conf             00122456643210---36777641012222332111000013-----366322472079972233667775--079998
Q batch____       165 ALGQMSNVTGGCPD---LARAITFAHSAGMVVMVDGAQGAVHF-----PADVQQLDIDFYAFSGHKLYGPTG--IGVLYG  234 (401)
Q Consensus       165 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~g--~g~l~~  234 (401)
                      ...+++++++...+   ...+...+......++.|........     ...........+..+..|.++..|  .+++..
T Consensus       151 ~~~~~~n~~g~~~~~~~~~~i~~~~~~~~~~iv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~g~~~~~~~~  230 (354)
T c3ffhA_         151 WICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA  230 (354)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHCCCCEEECC
T ss_conf             24685434310069999999998610188699971702430357865001220259848982342000000012203217


Q ss_pred             CHHHHHHHCHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             68899520120016655553220011101111125678811667765565899876421799999998634899999861
Q batch____       235 KSELLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAK  314 (401)
Q Consensus       235 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  314 (401)
                      +......+......+                         .............+.........++..+.....+...+.+
T Consensus       231 ~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  285 (354)
T c3ffhA_         231 DKEIIRQLNIVRPPF-------------------------NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR  285 (354)
T ss_dssp             CHHHHHHHHHTCCSC-------------------------CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCC-------------------------CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             868899999974002-------------------------4442058999999837651899999999999999999973


Q ss_pred             CCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             79829904899857999827999999999998689199970576735577508997799976888899999999999999
Q batch____       315 RPGFRSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAVDR  394 (401)
Q Consensus       315 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~t~edid~~i~~l~~  394 (401)
                      ++++.+. +++++++|+++ +.+.+++.+.|.++||.+++|+.|        +.++++|||++   |+||+|+++++|++
T Consensus       286 l~~~~~~-~~~~~fv~~~~-~~~~~~l~~~L~~~gI~v~~g~~~--------~~~~~iRis~~---t~ee~~~l~~al~~  352 (354)
T c3ffhA_         286 FEKVKLY-PANGNFVLIDL-GIEAGTIFSYLEKNGYITRSGAAL--------GFPTAVRITIG---KEEDNSAVIALLEK  352 (354)
T ss_dssp             CTTCEEC-CCCSSEEEEEC-SSCHHHHHHHHHHTTEECEETTTT--------TCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred             CCCCEEC-CCCCEEEEEEC-CCCHHHHHHHHHHCCEEEEECCCC--------CCCCEEEEEEC---CHHHHHHHHHHHHH
T ss_conf             5992983-79944999977-999899999998489099827356--------89964999828---98999999999898


Q ss_pred             HH
Q ss_conf             99
Q batch____       395 AL  396 (401)
Q Consensus       395 ~l  396 (401)
                      +|
T Consensus       353 iL  354 (354)
T c3ffhA_         353 LL  354 (354)
T ss_dssp             HC
T ss_pred             HC
T ss_conf             49