125 c3nraA_ Probab=99.94   E-value=4.7e-24  Score=163.69  Aligned_columns=331  Identities=15%

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC--CHHEEEEECCHHHHHHHHHHHHHHC
Q ss_conf             88888989999999999873788775354677999999999999999984719--4002999698899999999975312
Q batch____        27 ATALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAP--DDKTIVWTRGTTESINMVAQCYARP  104 (401)
Q Consensus        27 ~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~lA~~~g~~--~~~~i~~t~g~t~a~~~~~~~~~~~  104 (401)
                      .+..+++.+.+++.+.+...    ....|.......+..+.+.+.+.+.+|.+  ++++|++|+|+|++++++++.+   
T Consensus        33 ~~~~p~~~~~~a~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~t~al~~~~~~~---  105 (388)
T c3nraA_          33 DAHEPTPGAFDLFSAGVQSG----GVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT---  105 (388)
T ss_dssp             TTSCCCTTHHHHHHHHHHHT----HHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT---
T ss_pred             CCCCCCHHHHHHHHHHHHCC----CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCHHHHHHHHHCC---
T ss_conf             81118989999999997338----65558986799899999999999870798970214898063069999997133---


Q ss_pred             CCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCC------CCHHHHHHHCCCCCCEEECCCCCCCCCCCCH
Q ss_conf             4675512430367513568999876552694688644878766------3878998632457730000122456643210
Q batch____       105 RLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRL------PDVDLLPELITPRSRILALGQMSNVTGGCPD  178 (401)
Q Consensus       105 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (401)
                       .+++|.|+++.+.|++......    ..|.+.+.++.+....      ++++.++.....++....+.+++++++...+
T Consensus       106 -~~~Gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~nptG~~~~  180 (388)
T c3nraA_         106 -VARGDKVAIVQPDYFANRKLVE----FFEGEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYS  180 (388)
T ss_dssp             -CCTTCEEEEEESCCTHHHHHHH----HTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCC
T ss_pred             -CCCCCEEEEECCCCHHHHHHHH----HCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCC
T ss_conf             -4688789994897157899999----74986899842556676667574889998751358805303687756543589


Q ss_pred             ---HHHHHHHHCCCCCCCCCCCCCCCCCCC--------CCCCCCCCEEEEEECCCCCCCCC--CEEEEECHHHHHHHCHH
Q ss_conf             ---367776410122223321110000133--------66322472079972233667775--07999868899520120
Q batch____       179 ---LARAITFAHSAGMVVMVDGAQGAVHFP--------ADVQQLDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPW  245 (401)
Q Consensus       179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~s~~~~~~~~g--~g~l~~~~~~~~~l~~~  245 (401)
                         ...+...++.++..++.|.++......        ..........+..+..|.++..|  .|++..+..........
T Consensus       181 ~~~l~~i~~~a~~~~i~ii~D~ay~~~~~~~~~~~~~~~~~~~~~~~~v~~~~sk~~~~~g~r~g~~~~~~~~~~~~~~~  260 (388)
T c3nraA_         181 AEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSTESLSGYRLGVAFGSRAIIARXEKL  260 (388)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECCCCCCCGGGCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEECCCHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
T ss_conf             99999999998862821002000133545876663212100027883899942432100012203653797899875320


Q ss_pred             CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf             01665555322001110111112567881166776556589987642179999999863489999986179829904899
Q batch____       246 LGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPGFRSFRCQD  325 (401)
Q Consensus       246 ~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~  325 (401)
                      ....                     ..+.+......+...+... .......+...+.+.+.+.+.+... ++.+..|++
T Consensus       261 ~~~~---------------------~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~~  317 (388)
T c3nraA_         261 QAIV---------------------SLRAAGYSQAVLRGWFDEA-PGWXEDRIARHQAIRDELLHVLRGE-GVFARTPQA  317 (388)
T ss_dssp             HHHH---------------------TSSSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHCC-CCBCCCCSB
T ss_pred             CCCC---------------------CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCC
T ss_conf             1346---------------------7876989999999998437-9999999999999999989987747-978944788


Q ss_pred             CCEEEEEEC--CCCHHHHHHHH-HHCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             857999827--99999999999-8689199970576735577508997799976888899999999999999999866
Q batch____       326 SSLLAFDFA--GVHHSDMVTLL-AEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALELLV  400 (401)
Q Consensus       326 ~~~~~~~~~--~~~~~~l~~~L-~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~t~edid~~i~~l~~~l~~L~  400 (401)
                      ++++|+.++  +.+..+++..| .++||.+++|+.|...      .+++||||++  +++|+++++++.|+++|++++
T Consensus       318 g~~~~~~~~~~~~~~~~~~~~ll~~~gv~~~pg~~f~~~------~~~~iRis~~--~~~e~i~~a~~rl~~~l~~~r  387 (388)
T c3nraA_         318 GSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPH------TADSVRLNFS--QDHEAAVAAARRIVTLVERYR  387 (388)
T ss_dssp             SSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTT------CTTBEEEECC--SCHHHHHHHHHHHHHHHHHHB
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECHHHCCC------CCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHC
T ss_conf             449999768878998999999998579199946231878------9976999903--998999999999999999865


