Phyre 2 alignment of P68066 with d1cdwa2

Return to main results | Retrieve Phyre Job Id

Job Description | P68066
Confidence | 22.34% | Date | Thu Jan 5 12:10:55 GMT 2012
Rank | 12 | Aligned Residues | 12
% Identity | 42% | Template | d1cdwa2
SCOP info | TBP-like | TATA-box binding protein-like | TATA-box binding protein (TBP), C-terminal domain
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 89 | 90 | . | . | . | . | . | . | . | . | . | 100
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | P | E | K | Y | P | Q | L | T | I | R | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | P | E | L | F | P | G | L | I | Y | R | M
Template Known Secondary structure |  |  | T | T | T |  | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 280 | . | . | . | . | . | . | . | . | . | 290 | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions