Phyre 2 alignment of P68066 with c3q3jA_

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Job Description | P68066
Confidence | 6.07% | Date | Thu Jan 5 12:10:55 GMT 2012
Rank | 55 | Aligned Residues | 36
% Identity | 22% | Template | c3q3jA_
PDB info | PDB header:membrane protein/protein binding | Chain: A: PDB Molecule:plexin-a2; | PDBTitle: crystal structure of plexin a2 rbd in complex with rnd1
Resolution | 1.97 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |  |  | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | D | I | E | Y | R | E | V | P | V | E | V | K | . | . | P | E | V | R | V | E | G | G | Q | H | L | N | V | N | V | L | R | R | E | T | L | E | D | A | V | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | Q | I | E | Y | K | T | L | I | L | N | C | V | N | P | D | N | . | . | . | E | N | S | P | E | I | P | V | K | V | L | N | C | D | T | I | T | Q | V | K | E
Template Known Secondary structure |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | S | S |  | . | . | . | T | T | S |  |  |  |  |  |  |  |  | T | T |  | B |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1493 | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | . | . | . |  |  |  | 1510 | . | . | . | . | . | . | . | . | . | 1520 | . | . | . | . | . | . | . | . | . | 1530

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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