BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (98 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75616 Uncharacterized protein yaaX n=35 Tax=Enterobact... 197 7e-50 UniRef50_B7UI50 Predicted protein n=15 Tax=Enterobacteriaceae Re... 167 1e-40 UniRef50_P64543 Uncharacterized protein ypeC n=98 Tax=Enterobact... 91 9e-18 UniRef50_C8Q6U3 Putative uncharacterized protein n=1 Tax=Pantoea... 60 2e-08 UniRef50_C6DDN4 Putative uncharacterized protein n=5 Tax=Pectoba... 58 1e-07 UniRef50_D0FQN7 Conserved uncharacterized protein n=2 Tax=Entero... 57 2e-07 UniRef50_C4UPW4 Putative uncharacterized protein n=1 Tax=Yersini... 53 2e-06 UniRef50_A1JLC8 Putative exported protein n=32 Tax=Enterobacteri... 53 3e-06 UniRef50_C4S6V6 Putative uncharacterized protein n=3 Tax=Enterob... 52 7e-06 UniRef50_Q47CH5 Putative uncharacterized protein n=2 Tax=Betapro... 47 1e-04 UniRef50_A1JPR3 Putative exported protein n=29 Tax=Enterobacteri... 47 2e-04 UniRef50_C6CL11 Putative uncharacterized protein n=2 Tax=Dickeya... 47 2e-04 UniRef50_C6CAS2 Putative uncharacterized protein n=2 Tax=Enterob... 42 0.008 >UniRef50_P75616 Uncharacterized protein yaaX n=35 Tax=Enterobacteriaceae RepID=YAAX_ECOLI Length = 98 Score = 197 bits (502), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 98/98 (100%), Positives = 98/98 (100%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH Sbjct: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 Query: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR Sbjct: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 >UniRef50_B7UI50 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UI50_ECO27 Length = 98 Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/100 (88%), Positives = 90/100 (90%), Gaps = 4/100 (4%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH Sbjct: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 Query: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGH--GPGKHHR 98 YEWRGNRWH HGPPP PRH+K +DH G H GP KHHR Sbjct: 61 YEWRGNRWHPHGPPPSPRHNKH--NDHRGDHRPGPDKHHR 98 >UniRef50_P64543 Uncharacterized protein ypeC n=98 Tax=Enterobacteriaceae RepID=YPEC_ECO57 Length = 108 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 41/68 (60%), Positives = 52/68 (76%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW 63 +S+ LA +L+ P+AA A EITL+PS+KLQIGDRD+ G YWDGGHWRD +W ++YEW Sbjct: 2 FRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEW 61 Query: 64 RGNRWHLH 71 R NRW H Sbjct: 62 RKNRWWRH 69 >UniRef50_C8Q6U3 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q6U3_9ENTR Length = 118 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 19/103 (18%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLV--PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHY 61 M+ L LS++L P+ A A + P V + IGD+D RGY+WDG WR WWKQH+ Sbjct: 1 MKKTALLLSILLGMPLLASANVSVNINTPGVSIHIGDQDKRGYFWDGYDWRSPSWWKQHH 60 Query: 62 E-----------WRGNRWHLHGP------PPPPRHHKKAPHDH 87 W GN W P PP+H+ + +H Sbjct: 61 NQRVGMKGPHGYWNGNGWQTQHPGNKEPQKRPPQHNNQPQQNH 103 >UniRef50_C6DDN4 Putative uncharacterized protein n=5 Tax=Pectobacterium RepID=C6DDN4_PECCP Length = 140 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 + ++ + + +V+ AP A+ A I L+P V L IG+RD RG YWDG WR WW++H Sbjct: 7 ISALFMGMFVVMPAP-EAKGASIDLMPGVTLNIGERDRRGNYWDGYDWRSERWWQEH 62 >UniRef50_D0FQN7 Conserved uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D0FQN7_ERWPY Length = 122 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%) Query: 16 VAPMAAQ-----AAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHL 70 +AP A Q +A I L P + L +GDRD G+YWDGG WRD+ WW+ +Y + RW Sbjct: 14 IAPQALQTAYADSARIQLAPGMTLHLGDRDRHGHYWDGGRWRDYHWWRTNYRYNEGRWWR 73 Query: 71 H 71 H Sbjct: 74 H 74 >UniRef50_C4UPW4 Putative uncharacterized protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UPW4_YERRO Length = 169 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 16/93 (17%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKK ++ LSL+ + A + +I VP V L +GD+D G YWDG WR WW +H Sbjct: 3 MKKYLFLLGVLSLMPLVAQADMSLDIN-VPGVSLHLGDQDKSGNYWDGYDWRPPQWWHEH 61 Query: 61 ------------YEWRGNRWHLHGPPPPPRHHK 81 Y W G+RW PP P H Sbjct: 62 RGGHIGDHNERGYYWDGSRWQ---PPSAPNGHN 91 >UniRef50_A1JLC8 Putative exported protein n=32 Tax=Enterobacteriaceae RepID=A1JLC8_YERE8 Length = 142 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 7 IVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 ++ L+ + PMA A I L+P V LQIG++D G YWDG WRD WW+ H Sbjct: 27 LITILAWFPLIPMA-NAESIELLPGVSLQIGEQDRSGNYWDGYDWRDQQWWQNH 79 >UniRef50_C4S6V6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C4S6V6_YERBE Length = 150 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 7 IVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 ++ L+ + + PMA A I L+PSV L IG++D G YWDG WRD WW H Sbjct: 27 LITILAWLPLIPMA-NAESIELLPSVTLNIGEQDRSGNYWDGYDWRDRQWWHDH 79 >UniRef50_Q47CH5 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=Q47CH5_DECAR Length = 99 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 16/98 (16%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITL--------VPSVKLQIGDRDNRGYYWDGGHWRDHG 55 M+ I++A SL+ AP+ A AA+I + P V + G RD RGYYWDG +RD Sbjct: 1 MKKILIA-SLIAAAPLFASAADINVNLGGVRIDAPGVSVTFGTRDTRGYYWDGYEYRDPD 59 Query: 56 WWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGP 93 +W++H RG +++ R ++ PH GGH P Sbjct: 60 YWRRHDGHRGEKYYT------GRGNQGVPH-QDGGHCP 90 >UniRef50_A1JPR3 Putative exported protein n=29 Tax=Enterobacteriaceae RepID=A1JPR3_YERE8 Length = 164 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 13/80 (16%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKK ++ LSL+ + A + +I VP V L +GD+D RGYYWDG WR WW +H Sbjct: 1 MKKTLLLLGVLSLMPLMVQADVSLDIN-VPGVSLHLGDQDKRGYYWDGYDWRPPQWWHEH 59 Query: 61 ------------YEWRGNRW 68 Y W G RW Sbjct: 60 RGGHIGDRNERGYYWDGGRW 79 >UniRef50_C6CL11 Putative uncharacterized protein n=2 Tax=Dickeya RepID=C6CL11_DICZE Length = 121 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Query: 14 VLVAPM-AAQAAEITL-VPSVKLQIGDRDNRGYYWDGGHWRDHGWWK 58 VL + M AAQA ++L +P V L IGDRD RGYYWDG W D W Sbjct: 14 VLASAMPAAQADSLSLALPGVYLHIGDRDERGYYWDGNRWCDPDSWS 60 >UniRef50_C6CAS2 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C6CAS2_DICDC Length = 116 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 29 VPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 +P + L IGDRD+RGYYWDG W D W H Sbjct: 33 LPGIYLHIGDRDDRGYYWDGDRWCDPDTWYAH 64 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75616 Uncharacterized protein yaaX n=35 Tax=Enterobact... 125 4e-28 UniRef50_B7UI50 Predicted protein n=15 Tax=Enterobacteriaceae Re... 114 1e-24 UniRef50_C8Q6U3 Putative uncharacterized protein n=1 Tax=Pantoea... 82 6e-15 UniRef50_P64543 Uncharacterized protein ypeC n=98 Tax=Enterobact... 81 2e-14 UniRef50_C4UPW4 Putative uncharacterized protein n=1 Tax=Yersini... 79 4e-14 UniRef50_Q47CH5 Putative uncharacterized protein n=2 Tax=Betapro... 77 2e-13 UniRef50_C4S6V6 Putative uncharacterized protein n=3 Tax=Enterob... 72 6e-12 UniRef50_C6DDN4 Putative uncharacterized protein n=5 Tax=Pectoba... 70 2e-11 UniRef50_A1JLC8 Putative exported protein n=32 Tax=Enterobacteri... 70 2e-11 UniRef50_A1JPR3 Putative exported protein n=29 Tax=Enterobacteri... 69 4e-11 UniRef50_D0FQN7 Conserved uncharacterized protein n=2 Tax=Entero... 60 3e-08 UniRef50_C6CL11 Putative uncharacterized protein n=2 Tax=Dickeya... 59 4e-08 Sequences not found previously or not previously below threshold: UniRef50_C6CAS2 Putative uncharacterized protein n=2 Tax=Enterob... 51 1e-05 >UniRef50_P75616 Uncharacterized protein yaaX n=35 Tax=Enterobacteriaceae RepID=YAAX_ECOLI Length = 98 Score = 125 bits (314), Expect = 4e-28, Method: Composition-based stats. Identities = 98/98 (100%), Positives = 98/98 (100%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH Sbjct: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 Query: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR Sbjct: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 >UniRef50_B7UI50 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UI50_ECO27 Length = 98 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 85/98 (86%), Positives = 86/98 (87%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH Sbjct: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 Query: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 YEWRGNRWH HGPPP PRH+K H GP KHHR Sbjct: 61 YEWRGNRWHPHGPPPSPRHNKHNDHRGDHRPGPDKHHR 98 >UniRef50_C8Q6U3 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q6U3_9ENTR Length = 118 Score = 81.7 bits (200), Expect = 6e-15, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 19/104 (18%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLV--PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHY 61 M+ L LS++L P+ A A + P V + IGD+D RGY+WDG WR WWKQH+ Sbjct: 1 MKKTALLLSILLGMPLLASANVSVNINTPGVSIHIGDQDKRGYFWDGYDWRSPSWWKQHH 60 Query: 62 -----------EWRGNRWHLHGP------PPPPRHHKKAPHDHH 88 W GN W P PP+H+ + +H Sbjct: 61 NQRVGMKGPHGYWNGNGWQTQHPGNKEPQKRPPQHNNQPQQNHD 104 >UniRef50_P64543 Uncharacterized protein ypeC n=98 Tax=Enterobacteriaceae RepID=YPEC_ECO57 Length = 108 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 41/68 (60%), Positives = 52/68 (76%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW 63 +S+ LA +L+ P+AA A EITL+PS+KLQIGDRD+ G YWDGGHWRD +W ++YEW Sbjct: 2 FRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEW 61 Query: 64 RGNRWHLH 71 R NRW H Sbjct: 62 RKNRWWRH 69 >UniRef50_C4UPW4 Putative uncharacterized protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UPW4_YERRO Length = 169 Score = 79.0 bits (193), Expect = 4e-14, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 13/104 (12%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKK ++ LSL+ + A + +I VP V L +GD+D G YWDG WR WW +H Sbjct: 3 MKKYLFLLGVLSLMPLVAQADMSLDIN-VPGVSLHLGDQDKSGNYWDGYDWRPPQWWHEH 61 Query: 61 ------------YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHG 92 Y W G+RW P K H+ G Sbjct: 62 RGGHIGDHNERGYYWDGSRWQPPSAPNGHNPFKGPQHNEGRNQG 105 >UniRef50_Q47CH5 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=Q47CH5_DECAR Length = 99 Score = 76.7 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%) Query: 29 VPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHH 88 P V + G RD RGYYWDG +RD +W++H RG +++ R ++ PH Sbjct: 33 APGVSVTFGTRDTRGYYWDGYEYRDPDYWRRHDGHRGEKYYT------GRGNQGVPH-QD 85 Query: 89 GGHGP 93 GGH P Sbjct: 86 GGHCP 90 >UniRef50_C4S6V6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C4S6V6_YERBE Length = 150 Score = 71.6 bits (174), Expect = 6e-12, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 13/79 (16%) Query: 3 KMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH-- 60 K ++ L+ + + PMA A I L+PSV L IG++D G YWDG WRD WW H Sbjct: 23 KPLLLITILAWLPLIPMA-NAESIELLPSVTLNIGEQDRSGNYWDGYDWRDRQWWHDHQG 81 Query: 61 ----------YEWRGNRWH 69 + W G+RW Sbjct: 82 RDLGERNRHGHYWDGHRWQ 100 >UniRef50_C6DDN4 Putative uncharacterized protein n=5 Tax=Pectobacterium RepID=C6DDN4_PECCP Length = 140 Score = 70.5 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW 63 + ++ + + +V+ AP A+ A I L+P V L IG+RD RG YWDG WR WW++H + Sbjct: 7 ISALFMGMFVVMPAP-EAKGASIDLMPGVTLNIGERDRRGNYWDGYDWRSERWWQEHRGY 65 Query: 64 RGNRWHLHG 72 + HG Sbjct: 66 YRGERNRHG 74 >UniRef50_A1JLC8 Putative exported protein n=32 Tax=Enterobacteriaceae RepID=A1JLC8_YERE8 Length = 142 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 13/79 (16%) Query: 3 KMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH-- 60 K ++ L+ + PMA A I L+P V LQIG++D G YWDG WRD WW+ H Sbjct: 23 KPLLLITILAWFPLIPMA-NAESIELLPGVSLQIGEQDRSGNYWDGYDWRDQQWWQNHQG 81 Query: 61 ----------YEWRGNRWH 69 + W G+RW Sbjct: 82 RDLGERNRHGHYWDGHRWQ 100 >UniRef50_A1JPR3 Putative exported protein n=29 Tax=Enterobacteriaceae RepID=A1JPR3_YERE8 Length = 164 Score = 69.3 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 18/114 (15%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKK ++ LSL+ + A + +I VP V L +GD+D RGYYWDG WR WW +H Sbjct: 1 MKKTLLLLGVLSLMPLMVQADVSLDIN-VPGVSLHLGDQDKRGYYWDGYDWRPPQWWHEH 59 Query: 61 ------------YEWRGNRWHLH-----GPPPPPRHHKKAPHDHHGGHGPGKHH 97 Y W G RW P + H H+ G HG H Sbjct: 60 RGGHIGDRNERGYYWDGGRWQRPPTQDGHNPFRGQGHGNPDHNDGGPHGNQPQH 113 Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 27/58 (46%) Query: 35 QIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHG 92 IGDR+ RGYYWDGG W+ H +RG H + H+ + GHG Sbjct: 63 HIGDRNERGYYWDGGRWQRPPTQDGHNPFRGQGHGNPDHNDGGPHGNQPQHNGNNGHG 120 >UniRef50_D0FQN7 Conserved uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D0FQN7_ERWPY Length = 122 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 33/51 (64%) Query: 21 AQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLH 71 A +A I L P + L +GDRD G+YWDGG WRD+ WW+ +Y + RW H Sbjct: 24 ADSARIQLAPGMTLHLGDRDRHGHYWDGGRWRDYHWWRTNYRYNEGRWWRH 74 >UniRef50_C6CL11 Putative uncharacterized protein n=2 Tax=Dickeya RepID=C6CL11_DICZE Length = 121 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITL-VPSVKLQIGDRDNRGYYWDGGHWRDHGWW-- 57 +K + + + ++ A AAQA ++L +P V L IGDRD RGYYWDG W D W Sbjct: 2 IKPLLLGAIMMGVLASAMPAAQADSLSLALPGVYLHIGDRDERGYYWDGNRWCDPDSWSA 61 Query: 58 KQHYEWRGNRWH 69 ++H+ R + Sbjct: 62 RRHHHARQVYYQ 73 >UniRef50_C6CAS2 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C6CAS2_DICDC Length = 116 Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 23/41 (56%) Query: 29 VPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWH 69 +P + L IGDRD+RGYYWDG W D W H ++ Sbjct: 33 LPGIYLHIGDRDDRGYYWDGDRWCDPDTWYAHRHHPRQVYY 73 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75616 Uncharacterized protein yaaX n=35 Tax=Enterobact... 117 1e-25 UniRef50_B7UI50 Predicted protein n=15 Tax=Enterobacteriaceae Re... 116 2e-25 UniRef50_C4UPW4 Putative uncharacterized protein n=1 Tax=Yersini... 88 6e-17 UniRef50_P64543 Uncharacterized protein ypeC n=98 Tax=Enterobact... 81 1e-14 UniRef50_A1JPR3 Putative exported protein n=29 Tax=Enterobacteri... 80 2e-14 UniRef50_C6CL11 Putative uncharacterized protein n=2 Tax=Dickeya... 80 3e-14 UniRef50_C4S6V6 Putative uncharacterized protein n=3 Tax=Enterob... 79 6e-14 UniRef50_C8Q6U3 Putative uncharacterized protein n=1 Tax=Pantoea... 78 8e-14 UniRef50_C6DDN4 Putative uncharacterized protein n=5 Tax=Pectoba... 78 1e-13 UniRef50_Q47CH5 Putative uncharacterized protein n=2 Tax=Betapro... 77 2e-13 UniRef50_A1JLC8 Putative exported protein n=32 Tax=Enterobacteri... 77 2e-13 UniRef50_C6CAS2 Putative uncharacterized protein n=2 Tax=Enterob... 66 4e-10 UniRef50_D0FQN7 Conserved uncharacterized protein n=2 Tax=Entero... 61 1e-08 Sequences not found previously or not previously below threshold: UniRef50_B1XXV7 Putative uncharacterized protein n=1 Tax=Leptoth... 42 0.008 CONVERGED! >UniRef50_P75616 Uncharacterized protein yaaX n=35 Tax=Enterobacteriaceae RepID=YAAX_ECOLI Length = 98 Score = 117 bits (292), Expect = 1e-25, Method: Composition-based stats. Identities = 98/98 (100%), Positives = 98/98 (100%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH Sbjct: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 Query: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR Sbjct: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 >UniRef50_B7UI50 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UI50_ECO27 Length = 98 Score = 116 bits (290), Expect = 2e-25, Method: Composition-based stats. Identities = 85/98 (86%), Positives = 86/98 (87%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH Sbjct: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 Query: 61 YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR 98 YEWRGNRWH HGPPP PRH+K H GP KHHR Sbjct: 61 YEWRGNRWHPHGPPPSPRHNKHNDHRGDHRPGPDKHHR 98 >UniRef50_C4UPW4 Putative uncharacterized protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UPW4_YERRO Length = 169 Score = 88.2 bits (217), Expect = 6e-17, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 13/108 (12%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKK ++ LSL+ + A + +I VP V L +GD+D G YWDG WR WW +H Sbjct: 3 MKKYLFLLGVLSLMPLVAQADMSLDIN-VPGVSLHLGDQDKSGNYWDGYDWRPPQWWHEH 61 Query: 61 ------------YEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKH 96 Y W G+RW P K H+ G Sbjct: 62 RGGHIGDHNERGYYWDGSRWQPPSAPNGHNPFKGPQHNEGRNQGNPAQ 109 >UniRef50_P64543 Uncharacterized protein ypeC n=98 Tax=Enterobacteriaceae RepID=YPEC_ECO57 Length = 108 Score = 80.5 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 43/89 (48%), Positives = 57/89 (64%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW 63 +S+ LA +L+ P+AA A EITL+PS+KLQIGDRD+ G YWDGGHWRD +W ++YEW Sbjct: 2 FRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEW 61 Query: 64 RGNRWHLHGPPPPPRHHKKAPHDHHGGHG 92 R NRW H K+ ++ G Sbjct: 62 RKNRWWRHDNGYHRGWDKRKAYERGYREG 90 >UniRef50_A1JPR3 Putative exported protein n=29 Tax=Enterobacteriaceae RepID=A1JPR3_YERE8 Length = 164 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 18/114 (15%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH 60 MKK ++ LSL+ + A + +I VP V L +GD+D RGYYWDG WR WW +H Sbjct: 1 MKKTLLLLGVLSLMPLMVQADVSLDIN-VPGVSLHLGDQDKRGYYWDGYDWRPPQWWHEH 59 Query: 61 ------------YEWRGNRWHLH-----GPPPPPRHHKKAPHDHHGGHGPGKHH 97 Y W G RW P + H H+ G HG H Sbjct: 60 RGGHIGDRNERGYYWDGGRWQRPPTQDGHNPFRGQGHGNPDHNDGGPHGNQPQH 113 >UniRef50_C6CL11 Putative uncharacterized protein n=2 Tax=Dickeya RepID=C6CL11_DICZE Length = 121 Score = 79.8 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITL-VPSVKLQIGDRDNRGYYWDGGHWRDHGWW-- 57 +K + + + ++ A AAQA ++L +P V L IGDRD RGYYWDG W D W Sbjct: 2 IKPLLLGAIMMGVLASAMPAAQADSLSLALPGVYLHIGDRDERGYYWDGNRWCDPDSWSA 61 Query: 58 KQHYEWRGNRWH 69 ++H+ R + Sbjct: 62 RRHHHARQVYYQ 73 >UniRef50_C4S6V6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C4S6V6_YERBE Length = 150 Score = 78.6 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 3 KMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYE 62 K ++ L+ + + PMA A I L+PSV L IG++D G YWDG WRD WW H Sbjct: 23 KPLLLITILAWLPLIPMA-NAESIELLPSVTLNIGEQDRSGNYWDGYDWRDRQWWHDHQG 81 Query: 63 WRGNRWHLHGPPPPPRHHKKAP 84 + HG + Sbjct: 82 RDLGERNRHGHYWDGHRWQGRD 103 >UniRef50_C8Q6U3 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q6U3_9ENTR Length = 118 Score = 78.2 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 19/106 (17%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLV--PSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHY 61 M+ L LS++L P+ A A + P V + IGD+D RGY+WDG WR WWKQH+ Sbjct: 1 MKKTALLLSILLGMPLLASANVSVNINTPGVSIHIGDQDKRGYFWDGYDWRSPSWWKQHH 60 Query: 62 -----------EWRGNRWHLHGP------PPPPRHHKKAPHDHHGG 90 W GN W P PP+H+ + +H Sbjct: 61 NQRVGMKGPHGYWNGNGWQTQHPGNKEPQKRPPQHNNQPQQNHDKR 106 >UniRef50_C6DDN4 Putative uncharacterized protein n=5 Tax=Pectobacterium RepID=C6DDN4_PECCP Length = 140 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 4 MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEW 63 + ++ + + +V+ AP A+ A I L+P V L IG+RD RG YWDG WR WW++H + Sbjct: 7 ISALFMGMFVVMPAP-EAKGASIDLMPGVTLNIGERDRRGNYWDGYDWRSERWWQEHRGY 65 Query: 64 RGNRWHLHG 72 + HG Sbjct: 66 YRGERNRHG 74 >UniRef50_Q47CH5 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=Q47CH5_DECAR Length = 99 Score = 77.1 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%) Query: 29 VPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHH 88 P V + G RD RGYYWDG +RD +W++H RG +++ R ++ PH Sbjct: 33 APGVSVTFGTRDTRGYYWDGYEYRDPDYWRRHDGHRGEKYYT------GRGNQGVPH-QD 85 Query: 89 GGHGPGKHHR 98 GGH P + Sbjct: 86 GGHCPPGQAK 95 >UniRef50_A1JLC8 Putative exported protein n=32 Tax=Enterobacteriaceae RepID=A1JLC8_YERE8 Length = 142 Score = 76.7 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 3 KMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYE 62 K ++ L+ + PMA A I L+P V LQIG++D G YWDG WRD WW+ H Sbjct: 23 KPLLLITILAWFPLIPMA-NAESIELLPGVSLQIGEQDRSGNYWDGYDWRDQQWWQNHQG 81 Query: 63 WRGNRWHLHGPPPPPRHHKKAP 84 + HG + Sbjct: 82 RDLGERNRHGHYWDGHRWQHKD 103 >UniRef50_C6CAS2 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C6CAS2_DICDC Length = 116 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 1 MKKMQSIVLALSLVLVAPMAAQAAEITL---VPSVKLQIGDRDNRGYYWDGGHWRDHGWW 57 MK + ++ ++ A A +L +P + L IGDRD+RGYYWDG W D W Sbjct: 2 MKPLLLGIVMAGVLGAAVAVPAAQADSLSLALPGIYLHIGDRDDRGYYWDGDRWCDPDTW 61 Query: 58 KQHYEWRGNRWH 69 H ++ Sbjct: 62 YAHRHHPRQVYY 73 >UniRef50_D0FQN7 Conserved uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D0FQN7_ERWPY Length = 122 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 34/58 (58%) Query: 21 AQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPR 78 A +A I L P + L +GDRD G+YWDGG WRD+ WW+ +Y + RW H + Sbjct: 24 ADSARIQLAPGMTLHLGDRDRHGHYWDGGRWRDYHWWRTNYRYNEGRWWRHEQWRRHQ 81 >UniRef50_B1XXV7 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXV7_LEPCP Length = 350 Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 8/78 (10%) Query: 24 AEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRH---H 80 + ++ V L + + + + H G+ H H P P H H Sbjct: 275 GSVLMLAGVLLHLAESHGHEHPHEALDHE-----HAHRHDDGHHEHRHDPMPAGEHSHAH 329 Query: 81 KKAPHDHHGGHGPGKHHR 98 P H H P HHR Sbjct: 330 HHEPMRHGHPHVPDAHHR 347 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.304 0.131 0.399 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 692,356,627 Number of Sequences: 3077464 Number of extensions: 31497409 Number of successful extensions: 220727 Number of sequences better than 1.0e-01: 90 Number of HSP's better than 0.1 without gapping: 66 Number of HSP's successfully gapped in prelim test: 113 Number of HSP's that attempted gapping in prelim test: 217335 Number of HSP's gapped (non-prelim): 2514 length of query: 98 length of database: 1,040,396,356 effective HSP length: 67 effective length of query: 31 effective length of database: 834,206,268 effective search space: 25860394308 effective search space used: 25860394308 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 87 (38.2 bits)