 |
| Job Description | P39285 | | Confidence | 22.60% | Date | Thu Jan 5 11:58:57 GMT 2012 |
| Rank | 356 | Aligned Residues | 50 |
| % Identity | 16% | Template | c2w6aB_ |
| PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:arf gtpase-activating protein git1; |
PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain
|
| Resolution | 1.40 Å |
|
|   |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | L | Q | S | A | L | N | A | L | E | E | R | K | G | S | L | E | R | I | K | Q | Y | Q | Q | V | I | D | N | Y | P | K | L | S | A | T | L | R | A | Q | L | N | N | M | R | D | E | P | R | S | V |
| Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |
|
| Template Sequence |   |
T | L | Q | E | Y | L | E | L | K | K | A | L | A | T | S | E | A | K | V | Q | Q | L | M | K | V | N | S | S | L | S | D | E | L | R | K | L | Q | R | E | I | H | K | L | Q | A | E | N | L | Q | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
431 | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|