Phyre 2 alignment of P39285 with c2k33A_

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Job Description | P39285
Confidence | 20.90% | Date | Thu Jan 5 11:58:57 GMT 2012
Rank | 425 | Aligned Residues | 23
% Identity | 30% | Template | c2k33A_
PDB info | PDB header:membrane protein, transport protein | Chain: A: PDB Molecule:acra; | PDBTitle: solution structure of an n-glycosylated protein using in2 vitro glycosylation
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 931 | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . |  | . | . | . | . | 950 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query Sequence |  | E | K | P | I | R | I | G | D | T | V | T | I | R | D | L | . | T | G | S | V | T | K | I | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | A | L | V | N | I | G | D | Y | V | S | A | S | T | T | E | L | V | R | V | T | N | L | N
Template Known Secondary structure |  |  |  | S | S |  | T | T |  |  |  |  | S | T | T |  |  | S |  |  |  |  | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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