Phyre 2 alignment of P39285 with d1whka_

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Job Description | P39285
Confidence | 65.91% | Date | Thu Jan 5 11:58:57 GMT 2012
Rank | 71 | Aligned Residues | 23
% Identity | 13% | Template | d1whka_
SCOP info | SH3-like barrel | Cap-Gly domain | Cap-Gly domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 931 | . | . | . | . | . | . | . | . | 940 | . | . | . | . |  |  | . | . | . | . | . | 950 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | E | K | P | I | R | I | G | D | T | V | T | I | R | D | . | . | L | T | G | S | V | T | K | I | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | V | K | L | H | E | G | S | Q | V | L | L | T | S | S | N | E | M | A | T | V | R | Y | V | G
Template Known Secondary structure |  |  |  |  |  |  | S | S |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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