Phyre 2 alignment of P39285 with d1nppa2

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Job Description | P39285
Confidence | 71.96% | Date | Thu Jan 5 11:58:57 GMT 2012
Rank | 62 | Aligned Residues | 37
% Identity | 22% | Template | d1nppa2
SCOP info | SH3-like barrel | Translation proteins SH3-like domain | N-utilization substance G protein NusG, C-terminal domain
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 933 | . | . | . | . | . | . | 940 | . | . | . |  |  |  |  |  | . | . | . | . | . | . | 950 | . | . | . | . |  |  |  | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | I | R | I | G | D | T | V | T | I | R | . | . | . | . | . | D | L | T | G | S | V | T | K | I | N | T | . | . | . | R | A | T | T | I | S | D | W | D | R | K | E | I | I | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | F | E | K | G | D | Q | V | R | V | I | E | G | P | F | M | N | F | T | G | T | V | E | E | V | H | P | E | K | R | K | L | T | V | M | I | S | I | F | G | R | M | T | P | V
Template Known Secondary structure |  | S |  |  | T | T |  |  |  |  |  |  | S | S | T | T | T | T |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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