Phyre 2 alignment of P39285 with c2x5cB_

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Job Description | P39285
Confidence | 31.62% | Date | Thu Jan 5 11:58:57 GMT 2012
Rank | 221 | Aligned Residues | 31
% Identity | 23% | Template | c2x5cB_
PDB info | PDB header:viral protein | Chain: B: PDB Molecule:hypothetical protein orf131; | PDBTitle: crystal structure of hypothetical protein orf131 from2 pyrobaculum spherical virus
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 944 | . | . | . | . | . | 950 | . | . |  |  |  |  | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | L | T | G | S | V | T | K | I | . | . | . | . | N | T | R | A | T | T | I | S | D | W | D | R | K | E | I | I | V | P | N | K | A | F
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | A | E | G | S | V | S | I | V | E | T | K | N | G | Y | K | Y | L | V | I | R | H | P | D | G | G | T | H | T | V | P | K | T | D | I
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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