12 d1rrma_ Probab=100.00  E-value=9.8e-45  Score=334.37  Aligned_columns=327  Identities=14%

Q ss_pred             CEEEEECCCHHHHHHHHHHHCCCCEEEEEECHHHHHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             2338966898998999997339985999847558999-999999999967992899998887689998899999999997
Q batch____        12 SYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPL-YLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQ   90 (362)
Q Consensus        12 ~y~V~fG~g~~~~l~~~~~~~~~~rvliVtd~~~~~~-~~~~i~~~L~~~gi~~~~~~~~~~e~~~~~~~v~~~~~~~~~   90 (362)
                      |..|+||+|+++++++++++++.+|+|||||+++.+. +.+++.+.|++.++.+  .+|++++++|++++++++.+.+++
T Consensus         8 p~~i~fG~gal~~l~~~l~~~g~~~~livt~~~~~~~~~~~~i~~~l~~~~i~~--~v~~~~~~~~~~~~v~~~~~~~~~   85 (385)
T d1rrma_           8 NETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKXDAAGLAW--AIYDGVVPNPTITVVKEGLGVFQN   85 (385)
T ss_dssp             CSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEE--EEECBCCSSCBHHHHHHHHHHHHH
T ss_pred             CCEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHHCCCEE--EEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             877797787899999999853996499974833786705899997444379359--996698889898999999999841


Q ss_pred             CCCCCCCEEEEECCHHHHHHHHHHHHHH------------------CCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             6999774799954737897887999986------------------0699599966887666434553068984388624
Q batch____        91 KPHGRDTTLVALGGGVVGDLTGFAAASY------------------QRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKN  152 (362)
Q Consensus        91 ~~~~~~D~IiaiGGGsviD~aK~~a~~~------------------~~g~p~i~VPTT~~a~~~s~~~~~~~i~~~~~k~  152 (362)
                      .++   |+|||+||||++|+||++|..+                  .+++|+++||||  ++++|+++..++++++.++.
T Consensus        86 ~~~---D~iiavGGGsv~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTt--~~tgae~s~~avi~~~~~~~  160 (385)
T d1rrma_          86 SGA---DYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTT--AGTAAEVTINYVITDEEKRR  160 (385)
T ss_dssp             HTC---SEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECS--SSCCTTTCSEEEEEETTTTE
T ss_pred             CCC---CEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEECCC--CCCCCCCCCCEEEEECCCCE
T ss_conf             398---8998617648876632566443188874124420134443359978995287--53684556742787669987


Q ss_pred             EEEECCC---CCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2430368---3488997578735998999835999999998327999--9999987999997118999999999999999
Q batch____       153 MIGAFYQ---PASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAF--FNWLEENLDALLRLDGPAMAYCIRRCCELKA  227 (362)
Q Consensus       153 ~~~~~~~---P~~vivDp~l~~~~P~~~~~~g~~Dal~ha~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  227 (362)
                      +.+.+++   |+++|+||+++.++|++++++|++|+++|++|+++..  ++..+.++....+...+.+.+.+.. .....
T Consensus       161 k~~~~~~~~~P~~vi~Dp~l~~~~P~~~~~sg~~dal~~~~E~~~s~~~~~~~~~~a~~a~~l~~~~l~~~~~~-~~~~~  239 (385)
T d1rrma_         161 KFVCVDPHDIPQVAFIDADXXDGXPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAG-DKDAG  239 (385)
T ss_dssp             EEEEECGGGCCSEEEECGGGTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTT-CHHHH
T ss_pred             EEEEECCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-HHHHH
T ss_conf             89997004052089987335068989999953899999999887526799889999999999999999998604-08899


Q ss_pred             HHHHHCHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---------------------
Q ss_conf             998415663117899988989886776-3007788872456766589999999880899---------------------
Q batch____       228 EVVAADERETGLRALLNLGHTFGHAIE-AEMGYGNWLHGEAVAAGMVMAARTSERLGQF---------------------  285 (362)
Q Consensus       228 ~~~~~~~~~~g~~~~l~~gH~~~Hal~-~~~~~~~~~HG~~va~g~~~~~~l~~~~~~~---------------------  285 (362)
                      ..+......++. ...+.|++++|+++ .+++.++++||.++++.++...+++......                     
T Consensus       240 ~~~~~a~~~~~~-~~~~~g~~~~h~~~~~l~~~~~i~Hg~~~ai~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (385)
T d1rrma_         240 EEXALGQYVAGX-GFSNVGLGLVHGXAHPLGAFYNTPHGVANAILLPHVXRYNADFTGEKYRDIARVXGVKVEGXSLEEA  318 (385)
T ss_dssp             HHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSTTHHHHHHHHTTCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf             866655653111-2101251002233322310014466988998889999851120189999999861853344552100


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHH
Q ss_conf             98899999999997599953623-699899999999865202882669826237812464899989999999998
Q batch____       286 SSAETQRIITLLKRAGLPVNGPR-EMSAQAYLPHMLRDKKVLAGEMRLILPLAIGKSEVRSGVSHELVLNAIADC  359 (362)
Q Consensus       286 ~~~~~~~i~~~~~~lglp~~l~~-~~~~~~~~~~i~~~kk~~~~~~~~~l~~~iG~~~~~~~v~~e~i~~ai~~~  359 (362)
                      .++..+++..|++++|+|+++.+ +.+.+++.+-.....+......+            +..+|+|+++++|+++
T Consensus       319 ~~~~~~~i~~~~~~lglp~~L~elgi~~e~~~~ia~~a~~~~~~~~~------------p~~lt~e~i~~il~~a  381 (385)
T d1rrma_         319 RNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGN------------PREATLEDIVELYHTA  381 (385)
T ss_dssp             HHHHHHHHHHHHHHTTCCSSGGGGTCCGGGHHHHHHHHHTCGGGGGC------------SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCC------------CCCCCHHHHHHHHHHH
T ss_conf             48999999999998788983889399989999999999617453689------------8778989999999998