18 c1vciA_ Probab=100.00  E-value=0  Score=346.75  Aligned_columns=288  Identities=25%

Q ss_pred             CCCCEEEEEEEEEEECCCCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCEECCC
Q ss_conf             99833999607998168987446676451357889889998899988889999998203577776201399987887325
Q batch____         1 MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLH   80 (529)
Q Consensus         1 M~~~~l~~~nls~~y~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGaGKSTll~~i~g~l~~~~~~~~sG~i~~~g~~~~~   80 (529)
                      |+.  |+++|++++|    +++++|+||||++++||+++|+|+||||||||+++|+|.+     .+++|+|.++|+++..
T Consensus         4 M~~--i~~~~l~~~y----~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~-----~p~~G~i~~~g~~~~~   72 (353)
T c1vciA_           4 MVE--VKLENLTKRF----GNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLE-----EPTEGRIYFGDRDVTY   72 (353)
T ss_dssp             CCC--EEEEEEEEEE----TTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSS-----CCSEEEEEETTEECTT
T ss_pred             EEE--EEEEEEEEEE----CCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCC-----CCCCCEEEECCEECCC
T ss_conf             108--9994189984----8889863232468899789998799988889999996687-----4760079988888745


Q ss_pred             CCHHHHHHHHHCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCHH
Q ss_conf             99889987842373898427122115101499987323443138998899999999998748831267630455658988
Q batch____        81 ASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG  160 (529)
Q Consensus        81 ~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~~LSgG  160 (529)
                      .+...      +.+++++|+.        ++.+++.....   .........++.+.++.+++...   ..+++.+||||
T Consensus        73 ~~~~~------~~~~~~~~~~--------~~~~n~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~LSgG  132 (353)
T c1vciA_          73 LPPKD------RNISMVFQHM--------TVYENIAFPLK---KFPKDEIDKRVRWAAELLQIEEL---LNRYPAQLSGG  132 (353)
T ss_dssp             SCGGG------TTEEEECCCC--------CHHHHHHTTCC---CCCHHHHHHHHHHHHHHTTCGGG---TTCCGGGCCSS
T ss_pred             CCHHH------CEEECCCCCC--------EEEECCCCCCH---HHHHHHCCHHHHHHHHHCCCCEE---ECCCCEECCCC
T ss_conf             78323------0220233320--------00001211210---00011000025787631385101---10252035766


Q ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCEEEEEECCEEEEECC
Q ss_conf             99999999887539979998482007899999999999999860268549998089899998589599961782998398
Q batch____       161 ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNY  240 (529)
Q Consensus       161 ekqrv~la~al~~~p~vllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~isH~~~~i~~~~dri~vl~~G~iv~~~~  240 (529)
                      |+||++||+||+.+|++|||||||++||+.++..+++.|+++.++.|+|||++|||++++..+|||+++|++|++++.++
T Consensus       133 q~qrv~iaral~~~p~llllDEP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G~i~~~g~  212 (353)
T c1vciA_         133 QRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGS  212 (353)
T ss_dssp             CHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEEC
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECCEEEEECC
T ss_conf             15768888985078659999561019888999999999999999739824677305788886448899910475725459


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEECC
Q ss_conf             89998731210112222222232222222333322222233323223356404324982788417434212320001024
Q batch____       241 AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGE  320 (529)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~  320 (529)
                      +.+++..|...+...++.......................+...........        .-..+.+.|+ .|.+.+.+.
T Consensus       213 ~~ei~~~p~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~IR-PE~i~l~~~  283 (353)
T c1vciA_         213 PTEVYLRPNSVFVATFIGAPEMNILEVSVGDGYLEGRGFRIELPQMDLLKDY--------VGKTVLFGIR-PEHMTVEGV  283 (353)
T ss_dssp             HHHHHHSCSBHHHHHHSSSSCCEEEEEEECSSEEEETTEEEECCCCCTTGGG--------BTSEEEEEEC-GGGEEESCC
T ss_pred             HHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCEEEECCEEEECCCCCCCCCC--------CCCEEEEEEC-CCCEEECCC
T ss_conf             8899737898227875088775246589607738534318880355556667--------9975999994-001598127


Q ss_pred             CCCCHHHH
Q ss_conf             43445558
Q batch____       321 SGSGKSTT  328 (529)
Q Consensus       321 nGsGKSTl  328 (529)
                      ++.++.++
T Consensus       284 ~~~~~~~l  291 (353)
T c1vciA_         284 HMKRTARL  291 (353)
T ss_dssp             CCSSEEEE
T ss_pred             CCCCCCEE
T ss_conf             87776349