Phyre 2 alignment of P76280 with c3agjB_

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Job Description | P76280
Confidence | 22.53% | Date | Thu Jan 5 12:21:33 GMT 2012
Rank | 51 | Aligned Residues | 27
% Identity | 19% | Template | c3agjB_
PDB info | PDB header:translation/hydrolase | Chain: B: PDB Molecule:protein pelota homolog; | PDBTitle: crystal structure of archaeal pelota and gtp-bound ef1 alpha complex
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | H | H | L | E | F | V | R | A | A | A | R | Q | Q | C | Q | L | L | V | F | P | S | L | S | L | L | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | A | V | D | E | A | L | R | L | V | E | S | M | G | G | R | V | I | I | I | P | G | D | S | P | A | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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