 |
| Job Description | P0ACS2 | | Confidence | 44.06% | Date | Thu Jan 5 11:18:53 GMT 2012 |
| Rank | 409 | Aligned Residues | 36 |
| % Identity | 17% | Template | d1p4xa1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
| Resolution | 2.20 |
|
|   |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | T | P | G | E | V | A | K | R | S | G | V | A | V | S | A | L | . |
. |
. |
. |
H | F | Y | E | S | K | G | L | I | T | S | I | R | N | S | G | N | Q | R |
| Query Conservation |   |
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|
| . | . | . | . |
|   |
|
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|
| Template Sequence |   |
L | P | F | K | K | I | V | S | D | L | C | Y | K | Q | S | D | L | V | Q | H | I | K | V | L | V | K | H | S | Y | I | S | K | V | R | S | K | I | D | E | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | S | S |
| G | G | G | T |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |
| S | S | S | T | T |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|