HHsearch 1.5 NAME d1yqha1 FAM FILE d1yqha1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1yqha1.a3m DATE Wed Mar 10 04:04:38 2010 LENG 101 match states, 101 columns in multiple alignment FILT 102 out of 116 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.2 EVD 0.3904 -1.0904 SEQ >ss_dssp CCCCEEEEEEEEEECSSSCHHHHHHHHHHHHHHSCSEEEECSSCEEEEECHHHHHHHHHHHHHHHHHTTCSEEEEEEEEECCTTTCCCHHHHHGGGCTTC C >sa_dssp EEDDBBBCACBDBECEEDEEEDACEDACCBADECECDDDDDEEDBCABBDCEDACDABEDADDBADECCBDECECDDEDCECDEEBACBDDDCEEECEEC E >ss_pred CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCC C >ss_conf 9100043378996089852779999999999977993799798557744899999999999999997799879999996430499878988776421035 9 >Consensus xxxkvxaxixViPxgxxxsvsxxVaxvixxixxsGlxyxvxpmgTxIEGxxdevxxvvkxxhexxxxxGxxRVxtxiKIdxRxdkxxtxxxKvxkyxxxx x >d1yqha1 XSQQVTXSFSVVPQAKTKDVYSVVDKAIEVVQQSGVRYEVGAXETTLEGELDVLLDVVKRAQQACVDAGAEEVITSIKIHYRPSTGVTIDEKVWKYRDEY A >UniRef50_Q96YQ9(1-94:98) Putative uncharacterized protein STS227 n=1 Tax=Sulfolobus tokodaii RepID=Q96YQ9_SULTO E=9e-15 s/c=0.86 id=25% cov=91% ---KVLVDIAVEPLGTsSTSISKYVKKVFEILDRRGIRYYPAPSMTTIElDDITQLGYLLKEINDELEKMGVKRVVTLLKIDDRRDKENSIDHKLE---- --- >UniRef50_C6DYT3(1-97:98) Putative uncharacterized protein n=5 Tax=cellular organisms RepID=C6DYT3_GEOSM E=7e-27 s/c=1.25 id=24% cov=96% ---KVLVDLCVVPLGVGVSVSNYVAACEKVLTEAGLKIALHSYGTNIEGEWDEVFTAIKRCHEVVHGMGAPRITTTIKLGTRTDRNQSMEDKIRSVREK- - >UniRef50_C1VFN3(1-91:102) Putative uncharacterized protein n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VFN3_9EURY E=9e-10 s/c=0.71 id=22% cov=86% ----VIARFEVIPVHDG-SLSEDIAQAINALDDFDISYELTATDTVIEAdDVDEVFGAVQAAHKAVEGN---RVISSVEIDEQRDREQHVEDRIE----- -- >UniRef50_Q3J998(1-90:92) Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J998_NITOC E=4e-17 s/c=0.99 id=26% cov=89% ---RATAELQMIPIGSEISVRPEISRVIEILQEHDFILETHASGTNIEGELEDILSVIRKIHETLHQEGAVRLISYLKVETRTDKIPTIAGK-------- - >UniRef50_C2D8T1(1-102:108) Putative uncharacterized protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8T1_9ACTN E=4e-17 s/c=0.87 id=28% cov=98% ---ECSVAIQFLPMDAKDDktICKQVDAVIAYIASTGVNYFVAPFETTIEGSYEQCLEIVKNCPLVGAQAGCHSMMTYVKINYHPQGEVlSTAQKLSPYT QHNA >UniRef50_Q2NGG2(2-96:101) Putative uncharacterized protein n=4 Tax=Methanobacteriaceae RepID=Q2NGG2_METST E=1e-16 s/c=0.92 id=29% cov=89% ----ITADFAILPVGTdGTELKKFVTAAVQVIKDSNLNYQLTGMGTQIEANsYEELYPVLAKAQEAVFEAGIGRVYSVIKIDDRRDlENRTLDAKV---- ---- >UniRef50_C5SAS4(1-98:107) Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAS4_CHRVI E=8e-18 s/c=0.93 id=22% cov=93% ----VILDLTIFPTDQGSSFSRFVAPVIAMIRDSGFEHQLSPMGTQVETDtLPEALAIIERANAILDGFGAERVYVVAKFDIRPGASGRLTGKLDSVR-- -- >UniRef50_Q4L5Z5(2-98:98) Similar to unknown protein n=18 Tax=Bacillales RepID=Q4L5Z5_STAHJ E=7e-16 s/c=0.87 id=30% cov=96% --QDTLMSIQIVPKTPnNEDVIPYVDEAIKIIDDSGLHFRVGPLETTVQGDMSECLILIQKLHERMVELECPSIISQVKFYHVP-AGITIETLTGKYDNE -- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * X 1 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 1 * * * * * * * 0 0 0 S 2 970 * * * * * * * * * * * * * * 1030 * * * * 2 0 * * * * * * 1553 0 0 Q 3 * * * 2430 * * 2307 * * * * * * 1363 2162 * * * * * 3 0 * * * * * * 2607 0 0 Q 4 * * 3042 3066 * * * * 907 * * * * 3243 3054 * * * * * 4 0 * * * * * * 4452 0 0 V 5 3446 4898 * * * * * 2320 * * 5087 * * * * * 4889 710 * * 5 0 * * * * * * 4877 0 0 T 6 * * * * 5170 * * 2575 * 2492 * 3718 * * * 3241 1722 2819 * * 6 0 * * * * * * 5020 0 0 X 7 1035 * * * * * * 5212 * 3977 4347 * * * * * * 1425 * * 7 0 * * * * * * 5082 0 0 S 8 1867 * 2396 2325 * 4447 * * * 5336 * * * 5689 5299 2178 * * * * 8 0 * * * * * * 5239 0 0 F 9 * * * * 1785 * * 1200 * 2495 * * * * * * * 3612 * 6038 9 0 * * * * * * 5380 0 0 S 10 2762 3975 * 5047 * * * * 4891 * * 5967 * 1888 * 1678 3176 5998 * * 10 33 5461 * 1000 1000 * * 5380 1000 0 V 11 6233 * * * 5173 * * 2027 * 3381 4206 * * * * * * 890 * 5395 11 0 * * * * * * 5499 0 0 V 12 4645 * 6462 6304 3907 * * 1795 * 2149 5063 * * 6505 * 4873 5154 2275 * 4445 12 0 * * * * * * 5454 0 0 P 13 6214 * * * * 6589 * * * * * * 58 * * 6014 * * * * 13 22 6069 * 1000 1000 * * 5500 1000 0 Q 14 4436 5797 * * 5497 6610 * 2000 5545 2144 3071 4325 * 6857 5486 5030 4036 3129 * * 14 43 5553 6918 959 1043 * * 5500 1557 0 A 15 4865 * 3013 6570 * 666 5414 * 6920 6205 * 6443 * * * * 3993 3898 * 6121 15 84 4468 6450 619 1518 0 * 5497 2393 1000 K 16 4890 * 5498 4031 * 4031 * 6965 2850 5984 * 6414 3710 4216 * 4195 1548 3051 * * 16 377 2120 * 862 1152 0 * 5515 4062 1152 T 17 * * 3098 3404 * 1260 * * 6164 * * 3799 4897 5703 * 2855 3406 * * * 17 157 3464 6335 277 2519 * * 5500 3137 0 K 18 3922 * 3357 2301 * 3635 * 5395 4304 * * 6406 3289 4867 * 3343 2641 3809 * * 18 140 3779 5690 0 * 0 * 5486 2960 1000 D 19 * * 3183 2938 * 5109 6308 * 6583 * * 6188 * 4285 5351 694 * * * * 19 75 4295 * 671 1427 * 0 5469 2185 1000 V 20 4246 * * * 4586 6500 * 3687 4936 2476 4735 6188 6404 6008 6335 6805 4140 1244 * 5282 20 0 * * * * 0 * 5469 0 1000 Y 21 3511 4289 6527 * 6219 3535 4754 3598 5714 6135 * * * * 5519 1071 6637 6252 * 3707 21 0 * * * * * * 5498 0 0 S 22 3159 * 2952 2938 6235 4153 6806 * 2678 * * 6051 3236 4474 2926 3919 5072 * * * 22 0 * * * * * * 5498 0 0 V 23 5005 * 5636 3529 2896 * 4874 3594 * 5540 * * 5707 4808 * * 6400 2796 6662 1439 23 0 * * * * * * 5498 0 0 V 24 6339 * * * * * * 2260 * 6846 * * * 6102 * * * 404 * * 24 0 * * * * * * 5498 0 0 D 25 1209 * 1909 4964 * 6644 * * 4422 * * 5482 6527 5401 4916 3796 4684 6439 * * 25 0 * * * * * * 5498 0 0 K 26 2328 * 4675 1776 * 5148 5528 6503 2873 5536 * * 5614 3884 2859 7160 5806 * * * 26 0 * * * * * * 5585 0 0 A 27 1409 3208 * * * * * 3756 * 4333 * * * * * 5697 * 1425 * * 27 0 * * * * * * 5585 0 0 I 28 * 6762 * 4562 5733 * 4767 1366 6698 4117 * * * 2993 * 6495 4777 1964 * 6959 28 0 * * * * * * 5585 0 0 E 29 2337 * 3763 2033 * 5427 * * 2656 * * 4294 * 5169 2543 4640 6424 * * * 29 0 * * * * * * 5585 0 0 V 30 3368 * * 4946 6211 6868 * 2668 4421 2818 5159 6959 * * 4948 6199 * 1673 * 3223 30 0 * * * * * * 5585 0 0 V 31 6520 * * * 5845 * * 1221 * 1364 6925 * * * * 6142 * 2923 * * 31 21 6086 * 1837 474 * * 5531 1452 0 Q 32 2971 * 3162 3135 * * 5513 * 2114 * * 4939 * 2604 2491 6583 6868 * * * 32 23 6004 * 0 * * * 5586 1389 0 Q 33 2749 * 2996 1801 * * * * 2767 * * 4129 * 4006 5002 3131 5190 * * * 33 20 6208 * 0 * * * 5586 1000 0 S 34 4406 * * 4757 5041 * 5230 * 3747 7249 6700 6386 * 5011 3772 1074 2984 * 6007 4837 34 60 4614 * 871 1141 * * 5586 2078 0 G 35 * 7069 3742 5577 6044 471 * * 6463 * * 3448 5118 7135 5545 * * * * * 35 56 4720 * 626 1506 * * 5586 2225 0 V 36 * 5405 * * 4889 * * 2469 * 967 4411 * 6044 6482 * * * 2795 * 4928 36 0 * * * * * * 5586 0 0 R 37 5010 * 3937 2976 * * 5224 * 1752 6422 * 3495 2785 5805 3448 4731 4302 6701 * * 37 14 6682 * 1000 1000 * * 5586 1000 0 Y 38 5343 5233 * * 3111 * 4610 5226 * * 5284 4834 5049 6210 * 5095 6471 3782 * 869 38 0 * * * * * * 5586 0 0 E 39 6868 6326 * 2062 5345 * 5844 6728 4082 6441 * 6219 * 2033 2554 5256 4114 4670 * 3915 39 0 * * * * * * 5586 0 0 V 40 * * * * * * * 4510 * 1577 3986 * 4290 * * * 3160 1340 * * 40 9 7318 * 3585 126 * * 5586 1000 0 G 41 4376 5139 5405 * 5646 1777 2689 * * * * 2544 * * * 4211 2269 * * * 41 0 * * * * * * 5586 0 0 A 42 2102 * 5009 * * 4230 * * * * * * 852 * * 2959 * * * * 42 0 * * * * * * 5586 0 0 X 43 4493 * 6439 * 2927 6411 * * * 3482 907 5203 * * * 4688 3970 * * 4373 43 0 * * * * * * 5589 0 0 E 44 4292 6842 6448 2096 3525 1167 5646 * * * 6449 6463 * 6554 * 3351 6441 * * * 44 0 * * * * * * 5586 0 0 T 45 * * * * * * * * * * * * * * * 5656 29 * * * 45 0 * * * * * * 5573 0 0 T 46 5826 6626 6417 5269 * * * 3227 * 4639 6819 3601 * 5768 * 5599 1379 1873 * * 46 0 * * * * * * 5573 0 0 L 47 * * * * 4315 * * 1101 * 2802 4004 * * * * * * 1848 * * 47 0 * * * * * * 5573 0 0 E 48 6459 * * 201 * * 7068 * 5320 * * * * 4172 * 5656 * * * 6498 48 148 3359 * 0 * * * 5573 3029 0 G 49 3946 * 5494 * * 393 * * 5965 * * 5398 5660 * * 4650 6498 4610 * * 49 112 3747 * 0 * * * 5573 2934 0 E 50 * * 1551 1800 * 6633 * * 5762 * * 3340 3241 * * 3264 4863 * * * 50 140 3432 * 0 * * * 5573 3238 0 L 51 4680 * 6471 * 3102 * * 2934 * 2459 3806 * 5550 6550 6633 * 5155 4250 2309 3005 51 0 * * * * * * 5573 0 0 D 52 4172 * 983 2633 * 5110 7023 * 5570 * * 4754 4520 6313 4806 3987 5179 * * * 52 0 * * * * * * 5573 0 0 V 53 4448 * 2517 1286 * * * 6368 5683 4452 * * 6538 2785 4840 5521 4142 6836 * 6159 53 0 * * * * * * 5573 0 0 L 54 3877 3515 * * * * * 2677 * 1545 * * * * * * * 1533 * * 54 0 * * * * * * 5573 0 0 L 55 4718 5220 * * 2107 4577 7061 5844 * 2157 1710 6229 * * * 6882 * 4965 5089 5428 55 0 * * * * * * 5573 0 0 D 56 2110 * 3359 2092 * 4674 * 5600 3589 * 5860 5052 5177 3977 4172 5546 3890 * * 6575 56 0 * * * * * * 5573 0 0 V 57 2371 5826 * * * 5656 * 2464 * 1972 6813 * * * 5994 * 5529 1801 * * 57 0 * * * * * * 5573 0 0 V 58 3449 * * * 6025 * * 1789 * 2344 5965 * * * * * 6229 1406 * * 58 0 * * * * * * 5573 0 0 K 59 4766 * 4906 3225 * 3233 6882 * 1446 5394 6550 5666 * 3157 2589 6855 * * * * 59 0 * * * * * * 5573 0 0 R 60 2561 * 3584 2387 5572 6032 6813 * 2702 5586 5369 5342 * 3569 2823 5483 5115 6562 * * 60 0 * * * * * * 5573 0 0 A 61 1598 2202 * * * 4760 * 3112 * 2985 3521 * * * * 6807 * 3692 * * 61 15 * 6633 * * * * 5573 0 0 Q 62 5136 7071 6619 4070 * * 1176 * * 4753 * 3886 4361 2964 6586 * 4333 4855 * 3724 62 0 * * * * 0 * 5520 0 1000 Q 63 4215 * 4122 1117 7056 * * 6094 3686 3653 6753 5196 * 3566 4284 5938 4434 6208 * * 63 0 * * * * * * 5573 0 0 A 64 1750 * * 3871 5436 * 6313 3443 4243 3612 * * * 4886 3600 6024 4987 2587 * 4558 64 0 * * * * * * 5573 0 0 C 65 3316 3768 * * * 3967 * 4031 * 1900 3434 * 3315 * * 5394 5239 2398 * * 65 123 * 3614 * * * * 5573 0 0 V 66 2540 * 6341 3926 2171 6866 2590 4247 * 3507 6422 * * * 6428 * 4480 3098 * 5174 66 9 * 7407 * * 230 2760 5496 0 3027 D 67 3489 * 3274 1848 * 4373 * * 3087 * 6861 3896 6593 3025 3629 4150 6614 7044 * * 67 40 6468 5944 0 * 941 1061 5582 1000 1564 A 68 2038 * 5719 3357 5664 7235 6967 5497 3275 3100 3113 4000 6603 3714 5215 6419 5800 5512 * 5610 68 89 * 4068 * * 0 * 5566 0 1967 G 69 * * 3431 4993 5906 277 * * * * * * * * * * 5444 6535 * * 69 13 * 6830 * * 279 2506 5535 0 2884 A 70 1676 2854 5538 * 4841 4409 6564 3292 * 6380 * * * * * 3844 5563 2268 * 5502 70 60 * 4612 * * 946 1057 5473 0 1681 E 71 5617 * 2990 3633 * 4599 6156 5490 3002 6103 6346 4626 2140 3683 6420 4010 4303 3751 * * 71 0 * * * * 0 * 5503 0 2266 E 72 * * 6506 4080 * 6226 6428 * * * * 6364 5556 6648 397 3291 * * * * 72 0 * * * * * * 5492 0 0 V 73 5687 * * * 6010 6395 * 2019 * 5050 6213 6618 * 6115 * 6775 4229 797 * * 73 0 * * * * * * 5492 0 0 I 74 3936 6405 * 4004 4936 * 5171 2850 * 3730 3388 6841 * 4342 * 3141 6227 3085 * 2412 74 0 * * * * * * 5494 0 0 T 75 4727 6171 * * 6567 * * 3973 * 3896 5559 * * * * 2239 1135 3518 * 4997 75 0 * * * * * * 5494 0 0 S 76 * 6114 3617 * * * 5446 3775 * 5510 * 3172 * 4124 * 3176 2731 2109 * 3003 76 0 * * * * * * 5494 0 0 I 77 4313 * * * 6600 * * 1275 * 2331 3841 * * * * 5555 * 2081 * * 77 0 * * * * * * 5494 0 0 K 78 6526 * 5961 6288 * * 6225 * 664 * 5382 6659 * * 2206 6816 4155 * * * 78 0 * * * * * * 5494 0 0 I 79 3433 * * * 4065 * * 772 * 3437 4416 * * * * * * 3024 * * 79 17 * 6393 * * * * 5494 0 0 H 80 6257 * 704 6403 6050 3517 4415 * * * * 3238 * 6634 * 4217 * 6757 * 4927 80 0 * * * * * 0 5485 0 1000 Y 81 * * 2321 3261 4728 * 4105 3345 * 6639 5549 6583 * 6257 6424 3959 2850 4867 4549 2693 81 37 6257 6346 0 * * 0 5485 1000 1000 R 82 5960 * 6425 * 6066 * 4846 * 3348 * * 6509 * 6273 402 5524 * 5495 * * 82 0 * * * * 1000 1000 5468 0 1627 P 83 4816 * 6342 5543 6448 * * 4402 3163 4740 * * 2089 * 1812 4688 2799 5607 * * 83 123 5286 4156 0 * 0 * 5478 1714 1000 S 84 5641 * 723 4256 * 2082 5502 * 6161 * * * * 6130 * 4823 * * * * 84 132 6805 3673 0 * 0 * 5478 1000 2701 T 85 3325 * * 4679 5406 3340 5607 * 1136 * * 6306 6514 * 3310 6589 5265 3710 * 5252 85 17 6439 * 0 * 0 * 5420 1000 2866 G 86 4644 * 3939 2207 * 2235 4701 5404 4384 * * 3764 4715 4799 5274 4446 3544 4298 * * 86 13 6757 * 0 * * * 5427 1000 0 V 87 4448 * 4058 6432 * 2905 6722 3434 5957 3246 * 3684 4765 2831 4103 5716 5662 2528 * * 87 148 3355 * 0 * * * 5427 2196 0 T 88 4605 * 5411 6536 * 4427 4497 * 5528 * 6596 5285 5265 5308 2970 1860 1635 * * * 88 0 * * * * * * 5422 0 0 I 89 4226 * * * 4731 6135 * 1762 * 2183 1791 * * * * * 4268 4688 * * 89 0 * * * * * * 5422 0 0 D 90 2847 * 2226 1539 * 4145 5550 6875 4036 * * 5423 * 4665 5108 6718 4192 * * * 90 0 * * * * * * 5421 0 0 E 91 6739 * 1951 2039 * 2695 5314 * 3830 * 6430 * * 3662 4522 4534 4330 * * 6403 91 0 * * * * * * 5421 0 0 K 92 * * * * * * * * 208 3811 6727 5253 * * 5208 * * * * * 92 0 * * * * * * 5421 0 0 V 93 * * * * * * * 2202 * 2131 5136 * * * * * 3535 1185 * * 93 37 * 5290 * * * * 5352 0 0 W 94 3735 * 4243 1513 * 3036 * * 5792 * * 5764 * 5720 4768 2231 3671 * 5964 * 94 49 4915 * 1000 1000 0 * 5178 1000 1000 K 95 4267 * * * * * * * 705 * 4976 5405 5265 * 2916 3051 * * * * 95 0 * * * * * * 4908 0 0 Y 96 * * * * 3464 * 4312 * * * * * * * * * * 1670 * 876 96 0 * * * * * * 4705 0 0 R 97 * * 3451 3723 * * 3115 * 3382 * * * 4948 3675 1180 * 3850 * * * 97 0 * * * * * * 4530 0 0 D 98 * * 2685 955 * * * * * * * 4275 4095 3201 3187 * * * * * 98 0 * * * * * * 4075 0 0 E 99 * * * 840 * * 3355 * 1967 * * 3508 * * * * * * * * 99 0 * * * * * * 3658 0 0 Y 100 * * 1641 * * * * * * * * 1552 * * * * * * * 1563 100 0 * * * * * * 1915 0 0 A 101 0 * * * * * * * * * * * * * * * * * * * 101 0 * * 0 * * * 1915 0 0 //