HHsearch 1.5 NAME d1wjwa_ FAM FILE d1wjwa_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1wjwa_.a3m DATE Tue Mar 9 22:55:43 2010 LENG 112 match states, 112 columns in multiple alignment FILT 119 out of 284 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.4064 -0.7269 SEQ >ss_dssp CCCCCCCSCCCCCCEEEEEECCCCSSSSTTSCCCCSSSSSTTHHHHHHHHHHHSSSEEEEEECSSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTCCC SSCCCCCCCCCC >sa_dssp EEEEEEEEEEEEECDCDCCACCDEDEEDEDCEEEEEEECCEDBDEDBDECCEECEEAEBDDEEDEEDECBDACACADDEEBACEAACBAADCBCECBCAE CEEBEEDDEEEE >ss_pred CCCCCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC CCCCCCCCCCCC >ss_conf 9754066787533920588882463100258778775197889999999997437844999705997749999808998999999999999999995100 789999998889 >Consensus xxxxxxgxlyxDlPqxlxkVxVxdkxxixxxdxerxxxxpxxlqxxIDxxxxxxxxgrxlVRpSgTEpxxrvxxExxxxxxxxxlxxxxxxxVxxxxggx gxxpxxxxxxxx >d1wjwa_ GSSGSSGAIYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAGGI GERPQPSGPSSG >UniRef50_D1JA39(360-458:464) Probable phosphomannomutase/phosphoglucomutase n=1 Tax=uncultured archaeon RepID=D1JA39_9ARCH E=7e-07 s/c=0.56 id=25% cov=32% ------------------------------------------------------------IRASNTSPLIRVTVEGATDAIMGKLMRKFVGLVED----- ------------ >UniRef50_D2RPX3(342-433:446) Phosphoglucosamine mutase n=8 Tax=Halobacteriaceae RepID=D2RPX3_9EURY E=4e-15 s/c=0.90 id=28% cov=80% ---GSLASLVDDletYPIRRTSIEVDDKERVMETVESTVRERYDEI-DALDGVRIDHGDGWTLVRPSGTEPVVRITAEARDDERAEALFEDAREIV---- --------------- >UniRef50_B5YF33(752-822:827) Mannose-1-phosphate guanyltransferase n=2 Tax=Dictyoglomus RepID=B5YF33_DICT6 E=4e-05 s/c=0.69 id=27% cov=23% -----------------------------------------------------------------------VYAESPTLKESQDLLEEFTNIIKEL---- ------------ >UniRef50_B2A4R9(354-442:442) Phosphoglucosamine mutase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=GLMM_NATTJ E=4e-15 s/c=0.93 id=27% cov=75% ------ASIMEELPQLLVNVKVSNKD---------SAINSQKVQEEKSKVEKQLGsKGRVLIRPSGTEPVIRVMVEGENRETLHEVANHLTQVIKKAAE- ------------- >UniRef50_B8I5R7(710-807:810) Nucleotidyl transferase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I5R7_CLOCE E=1e-07 s/c=0.58 id=12% cov=46% ----------------------------------------------IDGIKLYLEDGWVLIIPDADTPAFKIISEGSSAVTAKEHCVRFHNIVERI---- ------------ >UniRef50_A5N939(758-807:814) Predicted glucose-1-phosphate nucleotidyltransferase containing an additional conserved domain n=5 Tax=Clostridium RepID=A5N939_CLOK5 E=1e-06 s/c=1.09 id=23% cov=23% ------------------------------------------------------------VMPDAEEPLCKIYTECSDYKKLNKL--------------- ------------ >UniRef50_A8GNL3(375-475:480) Phosphomannomutase n=11 Tax=Rickettsia RepID=A8GNL3_RICAH E=5e-10 s/c=0.65 id=22% cov=72% -SSKTLDEIIEDLPKSystpEIKIFVPSRLKLQIIKEIKEKLLEEKIEfNDIDGVRVNTEHGWWLLRSSNTESIIVARAESASKNG-------------- ----------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1582 0 0 S 2 * * * * * * * 2251 * * * * * * * 340 * * * * 2 0 * * * * * * 2767 0 0 S 3 * * * * * 2795 * 2948 * * * * * * * 799 * * * 2721 3 0 * * * * * * 3279 0 0 G 4 2871 * * * * 1128 * * 2742 * * * * * 1964 * * * * * 4 0 * * * * * * 3447 0 0 S 5 * * * 3396 * * * * 3117 * * * 3186 * * 1254 1941 * * * 5 0 * * * * * * 3579 0 0 S 6 3117 * * * * * * * * 816 * * * * * 3378 * 2995 3396 * 6 0 * * * * * * 3579 0 0 G 7 2067 * 2794 * * 696 * * * * * * * * * * * * * * 7 0 * * * * * * 4136 0 0 A 8 1390 * * 3451 * 5449 4054 * * * * 2782 * 4436 * 1987 * * * * 8 0 * * * * * * 4574 0 0 I 9 * * * * 4533 * * 2655 * 1019 2254 * 5399 * * * 5757 4252 * * 9 0 * * * * * * 4893 0 0 Y 10 * * * * 3096 * 5099 4892 * 4580 4157 * * * * * * 2688 5497 876 10 0 * * * * * * 5073 0 0 V 11 3719 * 2131 3453 * * 4290 * 4062 5451 * 3317 * 3987 4998 4160 2880 3572 * * 11 0 * * * * * * 5096 0 0 D 12 5709 * 524 3953 * * * * 3931 * * * 4139 4368 * * 4325 * * * 12 94 4826 5174 1585 585 * * 5160 1572 0 L 13 5751 5004 * * 4667 * * 3984 * 1125 4634 * * * 4202 * 5657 4752 4973 2281 13 0 * * * * 0 * 5152 0 1000 P 14 * * * * 5301 * * * 4817 * * 5425 154 * * * * 5863 * * 14 34 * 5412 * * * * 5323 0 0 N 15 5729 4144 * 5199 * * 5440 5571 5200 * * 2471 * 1483 5481 2353 4468 5344 * * 15 0 * * * * * 0 5244 0 1000 R 16 6281 * 5231 * * * 5920 3529 2299 4738 * * * * 1857 4567 3266 3029 * 3795 16 137 3864 5513 1818 481 * 0 5308 2378 1000 Q 17 5375 * * 5323 * * * 5103 * 1241 5609 5119 * 1599 4549 4832 5952 5309 * * 17 40 5182 * 2000 415 1019 982 5279 1000 1645 L 18 4093 * 3741 5333 * 4485 * 2380 5101 2429 4942 * * * 5327 4503 3644 2376 * 5959 18 35 * 5385 * * * 0 5317 0 1000 K 19 5024 * 5509 * * * * * 1231 * 6509 1644 * * 4121 4202 3673 * * * 19 44 5043 * 1000 1000 1000 1000 5299 1000 1457 V 20 4487 5711 * * 4429 * * 2047 * 3309 6561 * * * * * * 899 * * 20 34 5435 * 1585 585 * 0 5342 1000 1000 K 21 * * 4625 3541 4130 * 6104 3954 2413 5798 * 5234 4360 5333 1934 4969 3354 5442 * 5869 21 0 * * * * 0 * 5342 0 1000 V 22 4301 4417 6716 6071 5357 5551 * 4121 * 4122 6261 * 6088 * * * 6406 561 * * 22 40 5185 * 2000 415 * * 5372 1000 0 A 23 3530 * 3425 3474 * 4440 * 5687 2014 6131 * 4981 2541 6693 3985 4231 * 3769 * * 23 61 5907 5357 0 * * * 5372 1000 0 D 24 * * 936 4124 * * 6566 * 6320 4693 * 2573 6230 5084 5178 3419 * 6046 * 6496 24 85 5547 4809 0 * 0 * 5326 1000 1000 R 25 * * * 5443 * 6212 5946 * 1271 4475 * 5545 5139 4621 1386 6086 * * * * 25 52 5608 6040 2322 322 * 0 5356 1000 1665 R 26 3620 * 3595 4242 6235 4987 4748 6395 5066 3968 * 3274 4235 4208 4412 2841 2811 4164 * * 26 94 * 3991 * * 1053 949 5337 0 2047 V 27 3265 * 4206 4686 * 4423 * 2336 3569 2881 5866 5894 3889 * 4268 6661 5334 2734 * * 27 58 5985 5419 1585 585 1917 444 5362 1000 2375 I 28 * * 5962 * 2725 * * 1152 6055 2471 * * * * 5120 * 6399 3609 4830 5081 28 25 * 5879 * * * 0 5348 0 2832 S 29 4325 5412 4884 3870 * * * * 1879 4195 5706 5453 3903 2812 5249 3649 3104 5362 * * 29 20 * 6219 * * * 0 5315 0 2708 T 30 4820 4677 3504 3364 * 5170 6339 3409 3926 5912 5336 4094 * 5377 4748 4476 2109 3289 * * 30 65 * 4498 * * * 0 5309 0 2745 T 31 4189 4988 4552 * 6350 4811 * 3557 5554 5097 * 2641 4810 * * 3076 1913 3431 6073 * 31 92 6722 4257 0 * 1829 477 5383 1000 3310 D 32 3574 * 1467 2709 * * 6482 * 4368 * 4537 4634 3861 * * 5831 * 4450 4541 3585 32 42 6036 6193 1000 1000 * 0 5383 1000 3324 A 33 1862 * 2085 3325 * 5848 6318 5604 * 5261 * 4089 4039 4873 5776 4781 3890 4752 * * 33 27 5732 * 1585 585 * 0 5370 1000 3344 E 34 3485 6050 4212 1111 5968 6628 * 3998 3530 4117 * * 5695 5393 4773 5007 5662 6037 * * 34 68 4435 * 1631 562 2282 332 5178 1596 3344 R 35 5491 * 5602 5550 * * * 5967 3146 5499 * 3333 * 4977 1287 6002 2534 5389 6204 5771 35 36 * 5339 * * 1605 575 5328 0 2966 Q 36 2736 * 5235 3824 3753 * * 4624 3605 4199 6307 6700 6199 4208 2299 4523 3573 4626 * 4639 36 0 * * * * 3372 147 5323 0 3018 A 37 1857 4057 * 5587 * * * 5027 5090 1620 * * * * 6108 3876 * 3074 5221 5083 37 0 * * * * 2452 291 4994 0 3093 V 38 3328 * * 5460 5762 * * 2232 6078 2353 5505 6380 * 4826 6374 5571 3094 2208 * * 38 51 * 4850 * * 2633 254 5001 0 2678 T 39 3506 * 5483 2122 5460 6366 5144 * 3909 4870 4314 3824 4518 5320 3817 3237 3559 5582 * 5396 39 158 4241 4295 1000 1000 3195 167 5053 1000 2854 P 40 5220 5976 4812 3594 * * 6450 6311 * 5251 5842 4455 709 4442 * 4256 * * * 6022 40 0 * * * * 1709 527 5037 0 3217 P 41 2933 * 4498 2125 * 5921 * 4401 2787 6292 * 5746 2657 4391 5070 5205 4428 4443 * * 41 19 6220 * 3459 138 1957 430 5048 1000 2990 G 42 3450 * 4170 1891 5515 2328 5753 5533 3844 3549 * 4614 6250 5498 6540 5493 6326 5227 * 5729 42 28 * 5720 * * 2616 257 4884 0 2766 L 43 3748 * * * * * 4201 2926 4712 1340 4801 * * 4981 * 5726 * 2184 * * 43 90 6331 4377 2322 322 3054 185 4888 1000 3010 Q 44 4275 * 5788 3734 6904 * 6337 4368 3680 3908 5190 * 5579 1199 4180 4916 4735 4989 * * 44 57 4700 * 0 * 1078 926 4987 1532 3222 E 45 3324 * 2935 1917 * 4095 6095 5050 4137 7023 * 3284 4575 3931 * 3546 5108 6385 * * 45 64 4869 6759 1000 1000 * 0 4803 1465 2437 A 46 1672 * 5902 2837 6427 * 6367 3954 3501 3525 6744 6814 * 5763 3625 4922 3874 5551 5271 * 46 57 5303 6226 3170 170 1554 601 4857 1000 2623 I 47 4667 * * 6277 6853 * * 903 5686 2282 * * 5729 6081 * 6012 * 2943 * * 47 45 5029 * 2866 213 2753 232 5002 1507 2353 N 48 5191 * 651 3651 6748 7100 * * 3862 * * 3559 * 5280 5644 5549 * 5732 * * 48 10 * 7182 * * * 0 5011 0 2356 D 49 2532 * 4968 2733 * 1577 * * 4112 6905 * 4783 * 4037 5413 4172 5060 4749 * * 49 36 * 5346 * * 2586 263 5010 0 2251 L 50 2430 7320 6736 3263 6102 6694 * 2119 4705 2990 * * * 5991 * 5956 * 2112 * 6265 50 18 6296 * 1000 1000 1669 545 4995 1000 2638 V 51 6430 * 6822 3141 * * 6714 4703 2552 4633 4966 6436 * 5113 2517 4556 3744 2040 * * 51 40 5681 7055 1542 607 * 0 4986 1508 2554 K 52 2771 * 5597 3456 5343 6304 * 3002 3377 2926 * 6282 * 4531 3962 3375 * 2888 * * 52 54 5593 5977 2807 222 * 0 4988 1130 2501 K 53 3807 6844 3728 4119 * * * 4856 2376 3878 4444 3644 6918 5115 3032 4270 3937 6093 * 3745 53 24 7006 6808 0 * * 0 5038 1000 2193 Y 54 5009 7243 * * 3319 3939 3525 4901 6340 2330 5026 6423 * 6503 6179 5307 4235 5613 5564 1845 54 201 3111 6131 1320 738 1062 940 4804 3533 2813 T 55 4158 * 2997 3235 * 2235 * * 4029 * * 3765 2177 4794 5226 4212 5187 * * * 55 81 4379 7236 0 * 0 * 4792 2469 2334 L 56 5522 * 1607 3588 6061 5242 4112 * 3987 5747 5991 3155 * 3721 3845 3848 4962 6503 * * 56 133 3507 * 430 1956 0 * 4824 2568 1000 A 57 3155 4643 * 6411 * 763 * 5561 * * * * 6682 * 5351 3149 6434 6434 4927 5469 57 76 4292 * 2421 298 * * 4822 2121 0 R 58 * * * * * * 5838 * 5882 * * * * 5935 644 * * * 1692 * 58 0 * * * * * * 4822 0 0 A 59 1998 4619 * * 5405 3947 * 3853 * 3394 5863 * * * * 3771 5387 1664 6220 6272 59 0 * * * * * * 4893 0 0 F 60 * 6300 * * 1828 * 5134 3942 * 1118 5350 4707 * * * 6837 * 3647 * * 60 0 * * * * * * 4893 0 0 V 61 4592 * * * * * * 1746 * 3071 5751 * * * * * * 936 * * 61 0 * * * * * * 4784 0 0 R 62 * * * * * * * 4969 * 3941 5679 * * * 179 * * * * * 62 0 * * * * * * 4789 0 0 P 63 2363 * * 7058 * 6081 * * 4233 * * * 791 * 5387 4921 6654 5872 * 3872 63 27 5769 * 5000 46 * * 4431 1000 0 S 64 5769 * 2605 * * * * * * * * * * * * 291 * * * * 64 0 * * * * * * 4431 0 0 G 65 3915 * 5872 * * 713 5922 * * * * 2692 4515 * 5517 4203 * 6026 * * 65 0 * * * * * * 4431 0 0 T 66 5171 * 4323 4399 * * * * * * 6116 * * * * 5352 258 * * * 66 0 * * * * * * 4431 0 0 E 67 5872 * 5517 339 * 6042 * * 5026 * * * * 4093 5319 7064 4907 * * * 67 0 * * * * * * 4431 0 0 D 68 4334 * 2650 6768 * * 6938 * 6615 * 6803 3416 695 * * 4532 * * * * 68 0 * * * * * * 4431 0 0 I 69 2943 6675 * * 6683 * * 2795 4092 1711 6304 * * * * 5565 6693 1742 * * 69 0 * * * * * * 4430 0 0 V 70 5124 3166 * * 4106 * * 2022 * 2764 * * * * * * 4932 1528 * 5110 70 0 * * * * * * 4243 0 0 R 71 * * * * * * 3752 * 3317 * * 5659 * * 551 * 4930 3472 * * 71 0 * * * * * * 4159 0 0 V 72 4416 6197 * * * * * 1598 * 2850 * * * * * * 5699 1148 * * 72 0 * * * * * * 4169 0 0 Y 73 * * * * 4184 * 6624 4049 5518 4484 2252 5547 * * 3091 6800 5201 * 4810 1368 73 0 * * * * * * 4169 0 0 A 74 1466 5699 * * 3538 4529 * 4872 * 4194 * * * * * 3246 3680 2203 * * 74 0 * * * * * * 4169 0 0 E 75 * * 5838 107 * * * * * * * 4986 * 5471 * * * * * * 75 0 * * * * * * 4169 0 0 A 76 1186 4354 6431 * * 1449 * * * * * * * * * 3109 5819 * * * 76 0 * * * * * * 4444 0 0 N 77 3311 7315 3154 3861 * 4194 7281 * 3911 5063 * 4340 2364 5442 4296 3208 3883 5964 * 4484 77 0 * * * * * * 4526 0 0 S 78 6062 * 1680 5548 * * * 7077 6477 * * 3303 * 6055 * 2078 1887 6748 * * 78 0 * * * * * * 4526 0 0 Q 79 3628 * 3703 2423 * 6637 5538 6419 4244 4214 4610 6913 3842 2777 3460 4722 5217 4057 * 5298 79 14 6645 * 0 * * * 4675 1000 0 E 80 2694 * 3082 1527 7394 7029 6063 6027 3904 * * 4272 6995 6159 6637 3909 3943 4740 * 5863 80 0 * * * * * * 4677 0 0 S 81 3828 * 3320 2956 * 3953 6897 3877 3303 3647 * 5749 * 3951 3796 4410 3674 4673 5184 5004 81 0 * * * * * * 5048 0 0 A 82 1485 4672 * * * * * 4285 6204 2072 5339 * 6627 * 4856 4984 3579 3104 * * 82 0 * * * * * * 5033 0 0 D 83 6395 * 1837 1965 * 5676 5295 6082 3149 4809 * 3323 * 4048 4803 * 4392 * * * 83 0 * * * * * * 5091 0 0 R 84 3161 7113 4216 2220 * 6266 6219 6394 2471 6447 * 5701 * 3534 3651 3187 4488 6735 5513 6439 84 0 * * * * * * 5075 0 0 L 85 6230 6871 * * 5299 * 3968 2327 5269 1098 5282 * * 6495 * 6922 4737 3970 5777 4982 85 0 * * * * * * 5075 0 0 A 86 1937 2740 * 5244 5437 6077 * 4424 * 2779 4333 * * 5101 6361 3836 3741 3496 * 6948 86 5 * 8075 * * * * 5237 0 0 Y 87 4832 * 3080 2670 7380 4895 6852 4407 3581 4982 * 3486 * 4009 2998 3312 4074 4839 * 7105 87 0 * * * * * 0 5242 0 1000 E 88 2771 * 3679 1893 5356 6852 4195 * 3480 5122 4934 * * 4250 3572 4225 4628 5294 * 6433 88 0 * * * * * 0 5242 0 1000 V 89 3771 * * * 2514 6239 * 2059 * 2737 6324 * * * * * 6242 2346 4849 3451 89 0 * * * * 0 * 5122 0 1000 S 90 1407 3726 * 3810 * 5075 4418 4735 4177 5737 4486 * * * 3625 3866 6268 3628 * * 90 0 * * * * * * 5124 0 0 L 91 4147 * 3191 2797 * 3607 6805 6056 3731 5510 7083 3444 * 2547 3509 3813 4313 7135 * * 91 0 * * * * * * 5123 0 0 L 92 2721 * * * * * 3611 2518 4091 1916 * * * * 4506 5923 * 2324 * 6939 92 0 * * * * * * 5114 0 0 V 93 5178 * * * 6464 * * 1642 * 3908 * * * * * * 5071 878 * * 93 13 * 6828 * * * * 5123 0 0 F 94 4840 * 4646 2048 5725 * 4023 5046 2457 5347 * 4536 * 2918 3618 * * 6155 * 3396 94 0 * * * * 0 * 5095 0 1000 Q 95 3355 * 2766 2265 * * * * 2760 * * 5059 * 2797 2602 4373 6299 * * * 95 11 * 7103 * * * * 5080 0 0 L 96 3489 * * 2583 2548 * 5631 2769 * 2313 4631 6414 * 5560 5520 * * 6065 * 3395 96 0 * * * * 0 * 5314 0 1000 A 97 1708 2123 * * * 5481 * 3210 * 2350 5257 * * 4026 * * * 4318 * * 97 0 * * * * * * 4627 0 0 G 98 * * 3840 3293 * 1024 * * 4586 * * 3057 4197 3058 * * * * * * 98 0 * * * * * * 4503 0 0 G 99 4131 * * 3151 * 413 * * 4598 * * * * * * 4709 * * * * 99 0 * * * * * * 3760 0 0 I 100 2360 * * * * * * 1986 4173 2870 * * * 4200 * * * 1708 * * 100 0 * * * * * * 3286 0 0 G 101 2789 * * * * 226 * * * * * * * * * * * * * * 101 0 * * * * * * 3286 0 0 E 102 4084 * 2493 2553 * 4014 4212 * 2345 * * * 3916 * * 2723 * 3996 * * 102 0 * * * * * * 3195 0 0 R 103 * * * 3902 * * 3869 * 1952 * * * 1980 2157 2961 * * * * * 103 0 * * * * * * 2991 0 0 P 104 3672 * * * * * * * * * * * 118 * * * * * * * 104 0 * * * * * * 2945 0 0 Q 105 * * * 2496 * * * * * * * * * 1879 * 1808 2641 3252 * * 105 0 * * * * * * 2633 0 0 P 106 * * * * * * * * * 2290 * * 330 * * * * * * * 106 0 * * * * * * 2160 0 0 S 107 * 2223 * * * * * * * * * * 783 * * 2289 * * * * 107 0 * * * * * * 2027 0 0 G 108 1814 * * * * 1874 * * 2159 * * * * * 2191 * * * * * 108 0 * * * * * * 1777 0 0 P 109 1814 * * * * * * * * * * * 483 * * * * * * * 109 0 * * * * * * 1777 0 0 S 110 * * * 1000 * * * * * * * * * * * 1000 * * * * 110 0 * * * * * * 1445 0 0 S 111 * * * * * * * * * * * * * * * 1000 * * * 1000 111 0 * * * * * * 1445 0 0 G 112 * * * * * 0 * * * * * * * * * * * * * * 112 0 * * 0 * * * 1445 0 0 //