HHsearch 1.5 NAME d1whha_ FAM FILE d1whha_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1whha_.a3m DATE Mon Mar 8 21:13:53 2010 LENG 102 match states, 102 columns in multiple alignment FILT 106 out of 396 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.8 EVD 0.4368 0.3604 SEQ >ss_dssp CCSCSSCCCCSSCCCSSSSCSSCCSSCTTSEEEETTTEEEEEEEEEECSSSSSEEEEEECSSSCCSSSSEETTEECSCCCTTTEEEECGGGEEECCSCTT CC >sa_dssp EEEEEEEEEEEEEEEEDEEEEEDDEBEEECDACBDCEDDADADDCBEBEDCEDDCAAACBEEEECEBDACCEEDEBBECDDEBABBACCEEBEEDCEDEE EE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECHHHEEECCCCCC CC >ss_conf 9866566776775442000124578541157897796518999730368888318999932888873872877894651899777616888255357887 89 >Consensus gxxgsxsxxpsxxxxxxxxxxxxxxxxvGxrVxvxgxxxGxvryvGxxxxxxgxwxGVeldxpxGkndGsxxGxrYFxcxpxxGxFvxxxxvxxxxdxpx xx >d1whha_ GSSGSSGKSPSSPSLGSLQQREGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGVFAPASRIQRIGSGPS SG >UniRef50_A9VBW0(1709-1793:1911) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VBW0_MONBE E=1e-16 s/c=1.03 id=30% cov=84% ---GNEGNVSAPV----LTRRLATASDVGSRVDVVGYGMGTLRYFGPHKVKRSPRCGVELDDAVGNNNGTVGEHEYFDCADQHGVLVIPGKV-------- -- >UniRef50_UPI00017B52A3(135-232:843) UPI00017B52A3 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B52A3 E=1e-08 s/c=0.62 id=24% cov=88% -RTGESAPAAAQGQNHVRGPASPPPFQVGQRVCFPvddAVHAGEVRFCGLLPGRSsaGMYVGVLLDTPFGNWDGYYKEEKL--CHipsPLYGQLLPLTKV ---------- >UniRef50_UPI00006CFE6E(141-238:250) CAP-Gly domain containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFE6E E=2e-23 s/c=1.11 id=32% cov=93% ----AKQNNPVIITEEDYLKEEAEQMKKGDRCQLKEKKhRGTVEYVGKIPNlGQGYYIGIKLDEPYGKHNGSVGPVQYFECPDKYGIFVRPDKV-EVGDF P--- >UniRef50_Q9NQC7(429-547:956) Probable ubiquitin carboxyl-terminal hydrolase CYLD n=46 Tax=Euteleostomi RepID=CYLD_HUMAN E=4e-13 s/c=0.64 id=31% cov=96% ---GSIGHSPLSLSAQSVMEElntapvqespplamppgNSHGLEVGSLAEVKENPPfyGVIRWIGQPPGLNEVLAGLELEDECaGCTDGTFRGTRYFTCA LKKALFVKLKSCRPDSRFAS-- >UniRef50_C3YV23(144-238:872) Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YV23_BRAFL E=9e-11 s/c=0.72 id=31% cov=86% --SASKKTNVSKAVPLSEKELSELPVKVGMRVfiftEVNGKESqegGVVKYVGKLLKHGGdIYVGIELDNPVGNGSGVYEGERLFHARKDHAALVPL--- ---------- >UniRef50_B8P2B2(600-687:772) Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P2B2_POSPM E=2e-10 s/c=0.76 id=30% cov=73% ----SSSDTITAPTSLSKAgAPRGATLEIGIPCIISSKKarfRAYARYIGEVEGESGPWVGVEVPvsdawpgdklDGRQWNDGSWGGIRYF--------- ---------------- >UniRef50_A8PIA4(212-300:902) Putative uncharacterized protein n=1 Tax=Brugia malayi RepID=A8PIA4_BRUMA E=3e-10 s/c=0.74 id=21% cov=78% ------------------LKLNDGELMEGDRVVWFDalgiPRRGTARWIGYLRGHTNVYVGVDFDEAIGGGTGYFECVELFRSAPNHAGLLPISVCMKEA D----- >UniRef50_A9V4R7(117-184:1569) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4R7_MONBE E=2e-06 s/c=0.79 id=27% cov=65% ----SSATERRHVLQHARTSPPATPLELGTRALLDKNSACILRFVGTVDSFQGTMYGVELLDAKGNTDG------------------------------- -- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2490 0 0 S 2 * * * * * * * * 3573 * * * * * 1421 1351 2731 * * * 2 0 * * * * * * 3768 0 0 S 3 * * 3845 * 3747 * * * 4342 * * * 1534 * * 2339 2287 4092 * * 3 0 * * * * * * 4032 0 0 G 4 2284 * * * * 909 * 4148 * * * * * * * 2281 * * * * 4 0 * * * * * * 4276 0 0 S 5 1914 * * 4120 * * * * * * * 4563 4923 * * 920 3771 * * * 5 48 4934 * 2000 415 * * 4778 1000 0 S 6 3749 * 4966 2781 * * * 3847 3144 5600 * 4700 * 4141 3340 2256 3306 * 4623 * 6 0 * * * * * * 4887 0 0 G 7 2842 * * * * 2319 5471 * 3834 * * 5033 * 4821 5151 1271 4868 5327 * * 7 0 * * * * * * 4898 0 0 K 8 5281 * 4915 * * 3557 4685 * 4779 * 5103 3150 3790 * 3570 1596 2937 5560 * * 8 0 * * * * * * 4927 0 0 S 9 3186 * 4927 4959 * * * 2944 * 5560 * 3150 * * 5591 2586 1743 3733 * * 9 0 * * * * * * 4927 0 0 P 10 4078 * * * * 5680 * 4550 * * 6063 * 637 5858 3617 4113 * 3963 * * 10 78 4242 * 1277 767 * * 4982 1588 0 S 11 2865 * * 5575 * 5350 * 5433 4442 3950 5527 4829 5208 * 3721 1414 3041 5216 * * 11 24 5903 * 1000 1000 * * 4995 1000 0 S 12 2173 * * 4624 * 4803 5187 5216 3231 5433 * 5359 3453 4262 4301 2447 3937 4889 * 5889 12 0 * * * * * * 4995 0 0 P 13 3039 * 5028 4575 * 3339 * 5311 * 5078 * 4688 1702 5294 * 2354 5843 4284 * 5951 13 77 5253 5261 0 * * * 5051 1000 0 S 14 4429 * * 5561 * 3664 5055 5532 5494 4697 5068 3261 * 3470 4949 1887 2471 4894 * * 14 0 * * * * * 0 5046 0 1000 L 15 2893 * * 4480 4521 4640 4898 6159 4329 3599 4856 4148 4883 4335 2923 3487 4171 3653 * 5222 15 46 * 4996 * * * 0 4968 0 1000 G 16 3724 * 3461 2932 * 3685 3774 * * 3380 5635 * 5001 2417 * 3060 3366 * * * 16 21 * 6145 * * * 0 4872 0 2083 S 17 3061 * 4067 4488 * 3893 * * 5926 * * 4934 4026 2615 4542 1561 5361 5123 * * 17 70 * 4404 * * 1837 474 4904 0 2309 L 18 3277 * * 2740 5054 * * 5742 4625 2473 6413 5458 4089 5176 2809 3729 5745 3326 * 5622 18 31 5540 * 1585 585 1263 778 4776 1000 2522 Q 19 2940 * 5552 3639 * 4264 4031 * 3797 2431 4623 5077 5898 3237 5885 4075 4169 3783 * * 19 110 4382 5307 2011 411 1523 617 4901 1574 1944 Q 20 3154 * * 1974 6155 3814 * 5959 2894 * 4878 6057 4312 3823 4718 3867 3961 4141 * * 20 31 * 5556 * * * 0 4937 0 1998 R 21 3664 * 4900 3335 * 6416 6615 3880 3936 2853 * 3848 3619 4629 3115 3055 4497 5398 * * 21 36 5330 * 4087 87 2161 365 4858 1000 2356 E 22 3588 * 2991 3535 * 5848 * * 4614 3537 * 3576 4010 5930 3707 2138 4135 4741 * * 22 0 * * * * 1768 501 4843 0 2078 G 23 2475 * 2995 3782 * 2911 3128 5442 * 4897 * 5636 4462 4249 * 2981 4291 5485 * * 23 21 * 6092 * * 1193 829 4864 0 1689 A 24 2722 5739 * 2905 6141 4061 4009 * 5165 3014 5615 * 2837 4724 4121 4648 3374 5928 * * 24 76 4769 6061 1493 633 0 * 4835 1870 1584 K 25 4904 * 2815 2482 * 3182 * * 2748 * * 3591 3661 3816 * 3371 4537 6188 * * 25 34 5415 * 1375 703 0 * 4793 1550 1000 A 26 4322 6180 * * 2704 * * 3261 * 1517 4877 * * * 6468 4963 4694 2800 5395 4455 26 52 4812 * 702 1376 * * 4878 1904 0 E 27 4734 * 3887 2216 * * 5476 4745 2702 6159 5166 5869 4520 2717 3858 4110 4113 * * 5219 27 61 4593 * 2512 278 * * 4889 2253 0 V 28 5927 6645 * 4386 * * * 1806 5603 3569 6028 * 4414 6871 * * 6761 1136 * * 28 0 * * * * * * 5015 0 0 G 29 * * 5123 * * 134 * * 6035 * * 5099 * * 6008 * * * * * 29 13 * 6847 * * * * 5027 0 0 D 30 5271 * 1253 3932 * * * 5539 * 5158 5361 5459 * 2705 5278 2803 4864 5703 * 5935 30 0 * * * * * 0 4954 0 1000 Q 31 * 5630 6723 5921 6554 * 6851 * 3751 4771 6159 6402 4968 3671 772 5567 4509 5958 * 5602 31 24 5939 * 1000 1000 * 0 4916 1433 1000 V 32 4339 2680 * * * * * 4452 * 5761 * * * * * * 5212 507 * * 32 62 5012 6539 1305 748 * 0 4925 1998 1000 L 33 5959 4814 5358 3001 5744 * 6401 3731 4714 2820 3500 * * 5404 3974 3127 3241 3611 5374 6417 33 24 7118 6784 0 * 0 * 4919 1000 1541 V 34 6560 6525 * * 4037 * * 2822 * 2959 * 6397 * * * 6054 4980 958 4871 4638 34 148 3835 5195 1591 582 0 * 4927 2756 1000 A 35 4273 * 3718 4343 4981 3906 6418 4871 3856 4295 * 3591 3762 5210 4224 2240 4328 5283 * 4861 35 136 3478 * 1201 824 0 * 4895 2747 1612 G 36 4608 * 4041 4477 * 880 * * 4137 * * 3762 * * 5309 3699 4675 6173 * 5374 36 190 3543 4743 2044 401 * * 4935 2949 0 Q 37 5594 * 4305 2554 5717 3609 4054 * 2958 7037 * 3334 4605 3997 4717 3485 4359 5286 * 4148 37 155 3792 5066 1000 1000 0 * 4856 2411 1929 K 38 * 6289 5297 3762 6440 4249 4720 5496 2640 5484 6701 5111 6277 4677 1522 4880 5059 5220 * 4279 38 250 3151 4418 1463 650 0 * 4865 3217 1586 Q 39 3911 4999 6416 4870 5701 6707 * 6124 3317 4047 4641 6254 3339 4623 2419 4778 2932 3609 * 5415 39 161 3420 6367 1200 824 0 * 5013 3084 2097 G 40 3412 5243 * * * 212 * * * * * * * * * 5927 * * * * 40 0 * * * * 0 * 4869 0 1000 I 41 * * * 4304 5722 * 6278 2653 5567 5578 6155 * * 5326 4611 5416 1728 1954 6543 4557 41 0 * * * * * * 4875 0 0 V 42 4346 * * * * * * 1638 * 2148 * * * * * * * 1308 * * 42 22 * 6077 * * * * 4893 0 0 R 43 4460 * * 6751 * * * * 1726 4571 4529 * * 4129 1043 * * 6049 * * 43 0 * * * * 0 * 4877 0 1000 F 44 * * * * 1782 * * * * * * * * * * * * * 3422 699 44 0 * * * * * * 4893 0 0 Y 45 * 4409 * * 5849 * * 1859 4959 4085 4186 5305 * * 6633 6538 4573 1378 * 4609 45 0 * * * * * * 4893 0 0 G 46 * * * * * 46 * * * 5900 * * 6066 * * * * * * * 46 29 5646 * 2521 276 * * 4893 1563 0 K 47 5097 6703 5462 2655 6162 * 5367 5612 3066 4778 6299 4507 1829 4589 4671 4294 4155 * * 4676 47 0 * * * * * * 4893 0 0 T 48 5526 6628 * * * * 5360 2594 * 2131 6563 * 5042 * 6066 * 2263 1875 * 6244 48 115 3871 6882 1646 555 * * 4893 2512 0 D 49 3931 * 3423 2961 * 3985 2831 6914 3333 5808 * 4691 2637 4596 4185 3878 * 5650 * * 49 59 4630 * 1740 513 0 * 4889 2304 1000 F 50 * * 5290 * 2002 2014 6350 * 4370 4666 6191 2659 5346 * 6559 4543 3994 4631 6077 6768 50 13 6758 * 0 * * * 4893 1000 0 A 51 2414 * 4343 3536 6972 3214 4692 6338 2595 5211 5586 5671 * 7037 3971 3723 4313 4328 6696 5621 51 75 6479 4656 2322 322 * * 4893 1000 0 P 52 4224 * 3515 2843 * 4593 * 6713 3805 4835 5631 4448 2477 5145 5586 3027 3580 4033 * * 52 86 4116 * 1673 543 * 0 4873 2534 2013 G 53 * * 4944 3614 * 697 * * 5819 6742 * 3431 5582 5368 5632 4274 5308 7182 * * 53 31 5542 * 0 * 565 1626 4874 1632 2013 Y 54 6315 7067 5001 2876 4275 * 5621 2480 5232 3721 5470 6056 4216 4669 4803 4850 3006 3446 6477 5049 54 12 6938 * 0 * 0 * 4891 1000 1000 W 55 5364 * * * 3387 6297 5739 * 6140 3849 5082 * * * 5463 5456 * 4770 1052 2547 55 0 * * * * * * 4893 0 0 Y 56 2647 3676 * * 3152 6587 * 2867 * 3374 * 7876 * * * * * 1550 * 4059 56 38 5266 * 611 1533 * * 4892 1560 0 G 57 5219 * * * * 39 * * * * * * * * * * * * * * 57 0 * * * * * * 4892 0 0 I 58 * * * * * * * 1818 * 3042 * * * * * * * 749 * * 58 0 * * * * * * 4990 0 0 E 59 4093 * 4171 652 * * 5311 6008 4064 5020 6838 * * 4209 6184 * * 5085 * 6343 59 0 * * * * * * 4990 0 0 L 60 * * * * 2837 * * 5680 * 622 4385 * * * * * * 5238 3478 5227 60 63 4553 * 997 1003 * * 4990 2407 0 D 61 * * 622 3720 6070 * * 5475 5289 4625 5640 5431 4442 6521 6494 5512 5432 6083 * * 61 71 4380 * 1999 415 * * 4990 2508 0 Q 62 4206 * 2215 1494 * 5331 * * 3830 5616 7008 3710 * 5750 4713 4414 4352 6258 * 6628 62 68 4436 * 1604 576 * * 4990 2320 0 P 63 2673 * 5237 4395 * 3968 * * 4024 6789 * 5340 1022 5644 * 3759 5396 * * * 63 94 3988 * 285 2479 * * 4990 2734 0 T 64 6754 5263 5028 3993 6332 * 6001 2979 3382 3915 6205 4242 * 4593 3264 3616 4562 2317 * 5833 64 157 3544 5853 1129 881 * * 4990 2971 0 G 65 5236 * * * * 252 * * * 5403 7041 6135 4359 6764 * 5560 6727 * * * 65 79 4692 6072 0 * * 0 4941 2135 1000 K 66 5512 4673 3973 5644 6635 3980 6462 * 1124 * * 3535 * 6577 3285 4646 3983 * 6761 * 66 71 4371 * 2835 218 * 0 4923 2630 1547 H 67 * 4834 * * * 4636 2244 * * * * 1038 * * 5838 3282 3428 * 6237 * 67 37 5317 * 1531 613 0 * 4923 1581 1547 D 68 * * 693 * * * * * * * * 1974 * * 5853 3605 5196 * * * 68 0 * * * * * * 4990 0 0 G 69 * * * * * 0 * * * * * * * * * * * * * * 69 0 * * * * * * 4990 0 0 S 70 5233 6529 6609 * 6654 * * 4966 4444 5607 5333 6091 * 6260 4418 1655 1649 3899 * 4604 70 12 6896 * 1000 1000 * * 4951 1000 0 V 71 5329 * * * 2904 * 4310 2932 6479 3776 * 5693 5684 * * * * 1604 4742 2550 71 21 6102 * 0 * * * 4951 1000 0 F 72 4103 * 2583 3962 7118 2539 6963 * 2696 6508 7101 2350 * 3425 4984 5056 * * * * 72 0 * * * * * * 4951 0 0 G 73 4767 5238 5463 4237 * 426 * * 4989 6684 * 5216 6748 * 5805 5556 * * * * 73 0 * * * * * * 4951 0 0 V 74 * 6244 * 3697 * * 4542 3175 1917 * * 5729 * 5042 4200 * 3074 1937 * 6993 74 0 * * * * * * 4951 0 0 R 75 * * * 3615 5572 5693 6393 6381 3274 5939 * 6091 5684 2388 1212 5088 4648 * * 6898 75 28 * 5684 * * * * 4951 0 0 Y 76 * * * * 6356 * * 5494 * 2697 6240 * * * * * * 5294 * 372 76 18 * 6312 * * * 0 4924 0 1000 F 77 * * * * 38 * * * * * * * * * * * * * 5272 * 77 33 5477 * 0 * 1000 1000 4907 1428 1673 T 78 5220 * 3761 2132 7094 5280 6528 6882 3490 5156 * 4788 5522 3640 3297 4415 2569 4797 * 6565 78 13 6776 * 0 * 0 * 4913 1000 1000 C 79 4562 550 * * * 4382 * * * * * * 5653 * * 5445 2724 4941 * * 79 74 4314 * 779 1262 * * 4931 2100 0 A 80 3150 * 4156 3401 * 5258 5416 * 1993 * * 7036 2312 4640 2780 5286 6013 * * * 80 165 3212 * 475 1834 * * 4931 3149 0 P 81 4011 * 3466 3272 * 5381 5751 6354 5704 5284 7248 5569 975 4798 * 4369 5412 * * * 81 61 4600 * 858 1158 * * 4931 1823 0 R 82 6202 * 4430 6066 * 2359 6048 * 2186 4508 5243 1976 * 4075 4303 4496 7163 * * 6749 82 0 * * * * * * 4931 0 0 H 83 4105 4637 * * 6168 5415 1301 * 4038 * 6126 5581 5686 6778 3800 4016 4846 * * 2596 83 0 * * * * * * 4931 0 0 G 84 2766 6209 * * * 313 * * * * * 6099 5653 * * * * * * * 84 0 * * * * * * 4931 0 0 V 85 4784 6666 * * * 3765 6292 1867 * 2518 5131 * * 5314 6162 3022 6565 2288 * 6307 85 0 * * * * * * 4927 0 0 F 86 * * * * 380 * * 4824 * 2708 5433 * * * * * * 5648 * * 86 46 5648 6473 1000 1000 * * 4933 1000 0 A 87 3314 6282 * * * 5535 * 3564 6045 2975 * * * 6569 * * 4555 823 * 5647 87 10 * 7217 * * * 0 4940 0 1108 P 88 5716 * * * 6212 6318 5792 6476 2835 5962 * 6262 1656 4411 1623 4817 4974 * * * 88 0 * * * * 1150 864 4916 0 1658 A 89 3694 * * 3498 3850 6626 * 4095 * 2615 * * 1627 5272 5120 4476 * 3746 * 4830 89 8 * 7474 * * 0 * 4911 0 1108 S 90 3815 * 4156 2590 * 4201 4468 * 3941 6259 * 2709 5734 4798 5818 2117 4351 5371 * * 90 0 * * * * 0 * 4896 0 1000 R 91 4695 * 3914 5055 * * 5010 * 1533 * 6039 4218 * 3604 2188 4280 4846 4992 * * 91 0 * * * * * * 4889 0 0 I 92 5269 4035 * * * * * 2750 * 1855 * * * * * * * 1035 * * 92 222 5542 3045 2000 415 * * 4868 1000 0 Q 93 3456 * * 4518 * * * 4589 2602 4514 4947 5197 * 3428 2855 4495 3071 2768 * 6143 93 57 * 4694 * * 0 * 4736 0 2424 R 94 5885 * * 2643 * * 5050 * 1794 4627 5203 5943 5029 5055 1918 4100 * 4763 * * 94 28 * 5698 * * 968 1033 4511 0 1523 I 95 * 5412 4616 4376 4076 * * 3816 * 1900 * * * 4346 5043 5815 * 1351 * * 95 78 5177 5325 2322 322 971 1030 4410 1000 1591 G 96 3626 * 4974 3196 * 1412 * 4164 * * * * 3893 * * 2063 4645 * * * 96 0 * * * * 0 * 4136 0 1531 S 97 * * 620 5306 * * * * * 4348 * * * * 4216 3356 3015 * * * 97 0 * * * * * * 4249 0 0 G 98 4729 * * * 1273 2751 * 4208 * * * * * * * 2697 3596 * * 3198 98 74 4323 * 0 * * * 3782 1000 0 P 99 3712 * * * * * * * 4690 * * * 252 * * * 4460 * * * 99 0 * * * * * * 3797 0 0 S 100 * * * * * * * * * * 3020 * * * 2551 915 2509 * * * 100 0 * * * * * * 3429 0 0 S 101 1250 * * * * * * * * * * * * * * 1196 2804 * * * 101 0 * * * * * * 2628 0 0 G 102 1713 * * * * 525 * * * * * * * * * * * * * * 102 0 * * 0 * * * 1985 0 0 //