HHsearch 1.5 NAME d1p3ie_ FAM FILE d1p3ie_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1p3ie_.a3m DATE Mon Mar 8 18:47:09 2010 LENG 104 match states, 104 columns in multiple alignment FILT 106 out of 143 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.4049 -1.1005 SEQ >ss_dssp CCCSSCCCCCCTTHHHHHHHHHHHHCCSCCSCHHHHHHHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHH TSCC >sa_dssp EEEEEEEEEEEEDDDDDDDDEEDEEDEDCEDEEEDBCEDBDEDBEEEEEEDECEEEDBDEDAEEDBEDDDCBDECADECADEDECEEDDEEBCDDBCEED EDDE >ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC CCCC >ss_conf 9878788567873579999997317800120237999999999986187863657999999999999999999999999984398203768999999966 7469 >Consensus txxxxxxxrxrpgxxaLrEIrxxQxstxllIpkxpFxRLVrEIxxxxxxxxRxqxxALxALQeAaExyLvxlfedaxlxaxHakRvTixxkDixLxxrir gxxx >d1p3ie_ TGESKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIR GERA >UniRef50_D1YVU1(4-69:70) Archaeal histone n=2 Tax=Euryarchaeota RepID=D1YVU1_METPS E=0.0008 s/c=0.68 id=35% cov=63% ------------------------------ISKAPIARLLSQAGGD-----RISAEAVDEMVKYTEDYVLKVGTEASKLCIHAGRKTIKADDIKLAVeRL R---- >UniRef50_C5P239(1-61:208) Putative uncharacterized protein n=8 Tax=Coccidioides RepID=C5P239_COCP7 E=3e-08 s/c=0.98 id=27% cov=53% ---------------------------------------------EIEHEYCWQCTAIELLQKAAEAILCTLFECSVMAMAHYKHIMVNADNMKLVLGI- ---- >UniRef50_C5GTA3(28-109:206) Predicted protein n=4 Tax=Ajellomyces dermatitidis RepID=C5GTA3_AJEDR E=4e-13 s/c=0.92 id=33% cov=80% --------------KSLCEICFYQKSENLIFLKTIFTHLIHEI---NERNHQFQHFILDVIQVTAEFTLITLFKYNIKTMTHHSCVTLTVRDTQLIINI- ---- >UniRef50_Q54Z07(33-82:89) Histone H3.v2 n=1 Tax=Dictyostelium discoideum RepID=H3V2_DICDI E=2e-06 s/c=1.07 id=33% cov=49% --------------------------------------------------YRMSVGAIHALRTAFECYMNIIMTDCAIMAAHGKRKTITDRDIAFHQYIK ---- >UniRef50_A6SEZ8(25-123:153) Histone H3 n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SEZ8_BOTFB E=6e-10 s/c=0.66 id=36% cov=70% ---------------------------DLIIPKSSFASLAREIVEDIKPgeNYRIDDPTLLSLQECAEAHIVQEFEMATIFTNRASRATIQLEDMKDAKF I----- >UniRef50_B4KT71(110-207:214) Histone H3 n=2 Tax=Drosophila RepID=B4KT71_DROMO E=5e-20 s/c=1.01 id=31% cov=92% ----KQSNPFRRAQKFKREVRLLQRTPNFMIPRISFGRVVREIMLErcdCEPHFRITMGALEALQTATEMFLTQRFQDSYMMTMHRQRVTLELRDMALMA FI----- >UniRef50_Q8JKV9(1020-1088:1111) Histone h3, h4 n=1 Tax=Heliothis zea virus 1 RepID=Q8JKV9_9VIRU E=2e-09 s/c=0.93 id=29% cov=63% -----------------------------FIPTLPFCRAWKNIEIQIDSyqvvHLRYRGQALLLMRDVTECYLARLLEAAYIVMLNSGRKTLMAKDFK-- -------- >UniRef50_D2XB48(146-224:232) Histone H3 n=1 Tax=Marseillevirus RepID=D2XB48_9VIRU E=7e-11 s/c=0.87 id=30% cov=77% -----------------QEVRSQMRSTCLIIPKERFRTMAKEISKKEGHDVHIAEAALDMLQVIVESCTVRLLEKALVITYSGKRTRVTSKDIETA---- ---- >UniRef50_UPI000023D8E0(369-463:471) hypothetical protein FG08859.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023D8E0 E=1e-07 s/c=0.60 id=32% cov=66% -------------------------------PSLPpaFVKRVAQTALQSSglSNQRLSAETLDALIQSSEWFFEQLGDDLGAYADHAKRKTIEESDVfTL MKRL----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 3020 190 * * * 1 0 * * * * * * 2821 0 0 G 2 3489 * 4324 * * 933 * * * * * * * 4827 3759 2428 4561 * * * 2 0 * * * * * * 3162 0 0 E 3 * * * 4269 * 1326 * * 2410 * * 4668 * * 5330 2592 3373 4856 * * 3 0 * * * * * * 3347 0 0 S 4 3656 * * * * * * 2424 3275 4030 * * * 2941 * 2297 3204 2970 * * 4 31 5569 * 0 * * * 3486 1000 0 K 5 5072 * * * * * 5630 * 1215 * * * * 2394 2093 5670 3737 * * * 5 0 * * * * * * 3698 0 0 K 6 4309 * * 5501 * * 4635 * 1305 5258 * 6072 4036 4051 1976 * * 3925 * * 6 0 * * * * * * 3842 0 0 P 7 * * 6072 4822 * * * 4610 1779 * 5358 * 1862 4587 2677 3566 4811 * * * 7 14 * 6723 * * * * 3842 0 0 H 8 5039 * * * * 4807 2203 * 2448 6205 5550 4641 5490 4556 1999 5904 6140 * * 3150 8 0 * * * * 0 * 3919 0 1000 R 9 5175 * * 5025 * * 5307 * 3263 * * 5478 3965 4670 543 * * * * * 9 41 * 5140 * * * * 3875 0 0 Y 10 3357 * * * 2116 * 4989 4429 4005 5345 * 5546 6378 * 3203 6098 5771 6270 3287 2207 10 23 * 5971 * * 971 1029 3974 0 1480 R 11 6258 * * * * * 4067 4734 1827 * * 6077 6206 * 886 * 5647 5750 * * 11 92 6213 4367 2000 415 * 0 3970 1000 1520 P 12 3514 * * * * * * 5731 6169 5036 * * 529 3794 5032 4580 * * 6398 * 12 52 5633 6034 1000 1000 1350 719 4042 1000 2349 G 13 5054 * * * 5925 670 6533 4472 5476 4216 4788 * * 5976 4962 4602 6152 4657 * 6183 13 16 6536 * 2585 263 398 2053 4028 1000 2191 T 14 3543 * 4074 5759 6488 * * 5607 4224 5861 5460 4592 3962 3581 * 2828 1493 5271 * * 14 0 * * * * * 0 4101 0 1000 V 15 5441 6005 * * 5124 5124 6599 6331 2565 2850 5221 4532 * 4379 2991 6390 5819 1736 * * 15 13 * 6796 * * * 0 4203 0 1000 A 16 657 * * * 6000 5960 5011 * * 5849 * * * * * 4328 4694 2519 5441 * 16 42 * 5114 * * 0 * 4244 0 1541 L 17 * * * * * * * 3849 4723 369 * * * 5993 5649 6474 5963 4168 * * 17 38 5266 * 1585 585 * 0 4285 1313 1000 R 18 5764 3762 * 6887 * * 4711 * 1958 5193 7016 6825 * 3386 1222 * * * 5193 6928 18 63 5119 6177 2009 412 * 0 4317 1527 1000 E 19 * * 4898 212 * * * * 4731 * 6437 * * 4572 * 6429 * * * * 19 0 * * * * * 0 4390 0 1475 I 20 * * * * * * * 155 * 6375 6121 * * * * * * 3734 * * 20 0 * * * * 942 1060 4426 0 1475 R 21 4815 5439 * * * * 4036 * 3608 6137 6319 5397 * 4912 598 * 5272 6495 * 5855 21 0 * * * * * 0 4422 0 1000 R 22 4212 * * 5391 4223 * 4204 * 1745 6073 * 5951 5304 4181 1828 4618 5555 * * 4039 22 0 * * * * 0 * 4422 0 1000 Y 23 * * * * 3651 * 3661 4995 6011 1927 6000 6511 * 4163 6392 * * * * 1193 23 0 * * * * * * 4448 0 0 Q 24 * * * 5320 * * * * 5513 * 5133 4419 * 260 4969 6511 * * * * 24 23 6011 * 1585 585 * * 4448 1000 0 K 25 3018 * 6561 5424 * * 5110 * 1568 5403 6538 5531 * 4340 2028 3359 5140 * * * 25 0 * * * * * * 4448 0 0 S 26 6834 * 6124 * 6482 4348 4824 6046 6011 6392 6421 4447 * 6616 6000 850 2317 * * * 26 0 * * * * * * 4448 0 0 T 27 6251 * 5425 3488 6664 5456 * 5422 * * * 5693 4058 * 6511 4995 753 3483 6155 * 27 14 * 6672 * * * * 4448 0 0 E 28 * 5161 2210 2473 * 3841 4371 * 4021 6517 7142 2854 * 4140 4846 3889 5194 4886 * 5669 28 17 * 6385 * * * 0 4465 0 1000 L 29 6766 6496 * * 3095 * 6133 5992 * 702 6822 5368 4060 * 6184 4400 4688 5312 * * 29 0 * * * * * 0 4458 0 1254 L 30 6322 6119 * * 4171 * * 2586 * 712 4655 * * * * 4800 6492 4470 * 6821 30 13 * 6821 * * 590 1576 4495 0 1254 I 31 * 6051 * * 3354 * * 566 * 2870 5604 * * * * 5492 * 4958 * * 31 0 * * * * 483 1814 4550 0 1191 R 32 6115 * * 6154 * * 7680 * 4699 4120 * 6788 855 4400 2378 3861 * * * * 32 0 * * * * * 0 4607 0 1000 K 33 6727 * * 5508 6176 * 5854 6051 718 6123 * * * 4993 2360 4763 5271 6488 * * 33 0 * * * * * 0 4607 0 1000 L 34 2166 * * 5207 * 4978 * 3752 6350 1273 5903 6445 * 6424 4725 3908 4269 5508 * * 34 16 6546 * 3000 193 * 0 4607 1000 1000 P 35 4583 4774 * * * 6171 * 4546 * * * * 726 4733 4220 3163 7046 4325 * * 35 33 5482 * 1000 1000 0 * 4607 1000 1000 F 36 * * * * 123 * * 5559 * 4467 6001 * * * * * * * * * 36 32 5509 * 2000 415 * * 4610 1000 0 Q 37 2215 4585 * 4833 5979 4833 3954 4086 * 7036 5139 6128 * 2567 4379 2452 4547 4610 * * 37 0 * * * * * * 4610 0 0 R 38 6201 5582 * * * * 5556 * 3838 * 7195 * * * 370 5438 4376 * * 5459 38 0 * * * * * * 4671 0 0 L 39 5324 6178 * 6778 5338 * * 5763 * 463 4832 * * * 6064 7028 * 2989 * * 39 0 * * * * * * 4671 0 0 V 40 3178 5713 * * * 5527 * 2870 * 4847 * * * * * * * 596 5993 * 40 11 * 7028 * * * * 4671 0 0 R 41 6029 5582 * 6490 * 5526 4780 * 2522 * * * * 3487 710 5651 * * * * 41 8 7436 * 4907 49 * 0 4668 1000 1000 E 42 * * 4558 571 * 5485 * 7436 4326 * * 5217 * 3907 5489 4138 5288 * * 6904 42 0 * * * * * 0 4668 0 1000 I 43 5651 6305 * * 4329 * * 658 * 2995 * * * * * * 4278 3224 * * 43 51 * 4846 * * * 0 4668 0 1000 A 44 1854 4181 5205 4618 * 4545 * 4045 * 3528 3969 * * 5347 * 3548 2677 3643 * * 44 31 7186 6090 0 * * 0 4619 1000 1951 Q 45 4447 5135 4926 3885 * 5123 5292 4691 3971 3321 4447 4007 5441 1936 3682 6647 5208 4743 * 5403 45 0 * * * * 2298 328 4629 0 2344 D 46 5191 * 2726 2136 6171 6158 6389 * 2545 5411 5402 4174 5851 3719 5647 3328 4280 6737 * 7232 46 184 4254 3887 1383 698 270 2550 4703 2354 2205 F 47 6079 5166 * 5221 2514 6824 4587 2801 5888 3300 4488 3943 * 5201 * 3551 7133 4089 6406 2801 47 259 2681 6862 1284 763 * 0 4581 3244 2399 K 48 5858 * 4504 3806 5922 2560 * 5414 2647 4722 5959 4225 6403 4766 3927 2541 3802 5466 * 6638 48 145 3389 * 960 1041 1953 431 4574 3043 2538 T 49 3291 * 3569 3593 * 4090 3669 * 7102 * * 3840 2899 4939 3459 3286 2776 * 6623 * 49 184 3064 * 1478 642 912 1094 4581 3038 2399 D 50 5112 * 1898 2908 * 4101 4002 * 3860 * * 2593 3477 5627 4617 4328 7214 7203 * * 50 149 3351 * 1593 581 * 0 4646 2868 1366 L 51 6420 4999 * * 2496 5246 4628 3183 7309 1728 4972 7209 * 5291 * 6894 * 3872 6318 2822 51 64 4536 * 1054 948 608 1541 4728 1928 1366 R 52 * 5224 * * * * 4053 6108 4094 * 7239 5890 * 3914 564 4373 * * 5285 * 52 18 6327 * 0 * * 0 4887 1000 1000 F 53 * * * * 1371 * * 1906 * 5314 5305 * * * * * 6807 5317 2260 4230 53 0 * * * * * 0 4887 0 1000 Q 54 4084 * 5822 5581 * * 7279 * * * * 5347 * 1309 3281 3063 2171 * 5435 * 54 0 * * * * * 0 4887 0 1000 S 55 2293 5724 5046 4753 * 4041 4321 7037 3331 7013 6294 * 2841 7322 4194 2517 5580 4440 * 5090 55 0 * * * * * 0 4887 0 1000 S 56 3426 * 3202 2040 5189 3587 6999 6248 6133 5809 5378 5302 5165 3377 7177 2793 4056 * * 7239 56 0 * * * * * 0 4887 0 1000 A 57 495 4413 * * * 6105 * 5543 * * * * * * * 3641 3537 4604 * * 57 0 * * * * * 0 4887 0 1000 V 58 * * * * 5106 * * 1863 * 808 4175 6170 * * * * * 4168 * * 58 8 * 7506 * * * 0 4915 0 1000 M 59 3883 * 2576 2516 6077 5024 5709 4589 4877 2164 5032 4583 6737 3787 * 5231 * 4455 * * 59 0 * * * * 483 1814 4952 0 1191 A 60 548 4788 5610 5491 * * * 4494 * 4043 4625 * * * * 4769 5501 4934 * * 60 0 * * * * 0 * 4915 0 1000 L 61 6850 * * * 5062 * * 2726 * 475 3880 * 6816 * * * * 6149 * * 61 0 * * * * * * 4918 0 0 Q 62 * * * 5267 * * 4492 6052 6009 * 4864 * * 346 4380 7006 * 5510 * * 62 0 * * * * * * 4918 0 0 E 63 5281 6135 5879 1019 5581 5623 * * 4607 6414 * * * 3394 5775 5231 3339 3263 * 6298 63 0 * * * * * * 4918 0 0 A 64 676 5901 * * * * * 3907 * 5686 6893 * * * * 3344 3599 4059 * 5510 64 0 * * * * * * 4918 0 0 S 65 1265 5263 * * 4719 * * 6623 * 6612 * * * * * 2217 2369 3459 * * 65 0 * * * * * * 4918 0 0 E 66 * * 5058 74 * * * * * * * * * * 5661 * * * * * 66 0 * * * * * * 4955 0 0 A 67 1482 4539 3211 5641 4210 6253 * 5369 * 5501 4056 5709 5033 5438 * 3784 5128 5217 3750 5481 67 35 * 5393 * * * * 4955 0 0 Y 68 * 5363 * 5196 1729 * 4493 4553 * * 5358 * * 6086 * * 4118 5922 * 1163 68 0 * * * * * 0 4937 0 1316 L 69 5573 * * * 3687 * * 3239 * 657 3803 * * * * 6411 5363 4218 * * 69 0 * * * * * 0 4937 0 1316 V 70 5878 5137 * 3687 * 5459 6562 3266 * 4747 * 6490 * 7018 * 6459 2568 989 * * 70 0 * * * * 732 1330 4937 0 1316 A 71 5687 5762 4410 4029 * 3388 4054 6538 3833 5847 7167 4437 * 2122 3412 3434 2937 * * * 71 0 * * * * * 0 4958 0 1000 L 72 5276 * * 4371 3957 * 5974 4189 * 867 4018 * * 5762 4226 * 7393 3868 5658 6103 72 0 * * * * * 0 4958 0 1000 F 73 * * * * 699 3830 * * * 2239 3713 * * * * 5276 * * * * 73 0 * * * * * 0 4958 0 1000 E 74 4640 * 4485 780 * 4807 * * 3647 * * 6930 * 3750 6123 4359 3979 6885 * * 74 0 * * * * * 0 4958 0 1000 D 75 5064 4553 998 4059 * 4825 4325 6504 5382 4735 4574 4837 * 5341 * 7117 7071 7039 * 3556 75 13 * 6755 * * * 0 4958 0 1000 T 76 1373 3609 5698 * * 4292 * * * 3461 * 5128 * * * 2176 3454 5069 * * 76 0 * * * * * 0 4964 0 1390 N 77 6531 * 6202 6484 7150 4640 6851 4091 * 3864 5357 1782 * 3115 5356 3602 4453 4330 * 2752 77 0 * * * * * 0 4964 0 1390 L 78 3398 * * * * * * 3310 3038 1352 3468 6644 5635 5422 3940 * 4976 5022 * 5695 78 0 * * * * * 0 4964 0 1390 C 79 3511 1420 * * 5218 * * 3889 * 2386 4314 6891 * * * 6528 4041 4565 * 3638 79 0 * * * * 742 1314 4964 0 1390 A 80 1156 4062 * * * * * 6292 * * 3119 * 5464 * * 3170 2326 5035 * * 80 0 * * * * * 0 4958 0 1000 I 81 4093 * 6068 6885 4805 * 6441 1915 4197 2157 5738 4209 * 5097 4843 4847 3941 5724 * 3814 81 0 * * * * * 0 4958 0 1000 H 82 * * * * 6433 * 195 * 6123 * * 5917 * * 5063 5382 * * * 5066 82 0 * * * * * 0 4958 0 1000 A 83 938 3840 * * * 2970 5133 * * * * * * * 3216 3584 5701 5464 * 5708 83 0 * * * * * 0 4958 0 1000 K 84 6856 * 6951 6784 * 2756 4368 * 985 * * 3594 * 5288 3531 3688 * * * * 84 0 * * * * * 0 4958 0 1000 R 85 * 4390 * * * * 5708 * * * * * * 5459 135 * * * * * 85 0 * * * * * 0 4958 0 1000 V 86 5897 * 5658 6292 * * * 3093 2731 4261 5459 6506 * * * * 4815 833 * * 86 0 * * * * * 0 4958 0 1000 T 87 * * * * * * * 4694 * 5762 5708 * * * 5382 * 152 * * * 87 0 * * * * * 0 4958 0 1000 I 88 * * * * * * * 1320 * 1289 6784 * * * * * 6532 2553 * * 88 0 * * * * * 0 4958 0 1000 M 89 6850 * 4009 3539 4376 * 7326 5441 3875 5199 1582 4256 * 3899 5419 * 2515 6704 * 6771 89 0 * * * * 0 * 4922 0 1000 P 90 3001 * 4725 3434 * 6576 * 5738 3792 4138 5533 7239 2286 3917 4828 3950 5220 2640 * * 90 0 * * * * * * 4919 0 0 K 91 6443 * 3697 5060 * 7162 * * 1218 * * * 6103 6025 1807 3707 4643 6347 * * 91 0 * * * * * * 4919 0 0 D 92 * * 79 * * * * * * * * 4236 * * * * * * * * 92 63 4547 * 0 * * * 4919 1613 0 I 93 6386 * * * 4318 * * 1555 * 3239 1596 * * * * 6889 3804 3627 * * 93 33 5473 * 0 * * * 4922 1310 0 Q 94 3251 6547 7163 4124 * * 5608 6828 2252 4625 * 4678 * 1562 3605 6610 4360 6835 * 6314 94 0 * * * * * * 4883 0 0 L 95 6118 * 5911 * 4086 * * 5500 * 235 6212 * * * * * 5340 * * * 95 0 * * * * * * 4840 0 0 A 96 1290 5934 * 5426 * * 5306 3912 * * 3009 * * * * 6019 5011 2138 4742 5345 96 0 * * * * * * 4838 0 0 R 97 4208 * 7367 6239 * * * 5143 3608 2734 3706 * * 3947 1473 4684 4673 3753 * 6387 97 36 5349 * 0 * * * 4767 1000 0 R 98 * 5652 6066 5321 4397 5027 6015 6748 3715 5312 6760 3999 * 5201 820 6707 * * * 4038 98 0 * * * * * * 4767 0 0 I 99 5961 6073 * * 5818 * * 914 * 1451 * * * 5129 * * * 5243 * * 99 36 6228 6465 1000 1000 * * 4613 1000 0 R 100 * * * * * 4259 4970 * 3270 4287 * 5849 * 4860 496 * * * * * 100 0 * * * * 0 * 4113 0 1000 G 101 * * * * * 286 * * 5468 * * 5300 * * 2921 * * * * * 101 0 * * * * * * 3666 0 0 E 102 * * 2304 1229 * * * 5404 3519 * * * * 3749 2430 * * * * * 102 0 * * * * * * 3518 0 0 R 103 * 3205 * * * * * * 2294 * * * * * 540 * * * * * 103 0 * * * * * * 2621 0 0 A 104 0 * * * * * * * * * * * * * * * * * * * 104 0 * * 0 * * * 1587 0 0 //