HHsearch 1.5 NAME d1jbia_ FAM FILE d1jbia_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1jbia_.a3m DATE Tue Mar 9 23:02:33 2010 LENG 100 match states, 100 columns in multiple alignment FILT 103 out of 178 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.1 EVD 0.4546 0.7566 SEQ >ss_dssp CCCEECCSCCBTTTCCSSEEEEEECSCCCTTSCCEESSSSEETTSBHHHHHHHHTSSCTTCEEEEEEEECCBCSCCCEECSSCEEECCSCBSCEEEEECC >sa_dssp EEDEEBEBDBDADEBEEEEBCADADEDBDEEECDACADDBAAACABAAAAABBDDBCEDEBCDADACCBEDEDEBDDEDCEDBDADEBEEDDCBACACEE >ss_pred CCCEEEEECCCHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCCHHCCEEEEECCCCCCCEEEEEC >ss_conf 9763776032042168965999838986557871890422478787888753356451787489999748856555430047183004788863899869 >Consensus xxpxxitCxxxxxxxxxxxfxvxCPxxCxxxxxxVxGtxvYxxdSxICxAAiHaGxixxxgGxvxVxxxxxxxxyxgsxxNGIxSxxxxsxxxSFxfxxe >d1jbia_ TAPIAITCFTRGLDIRKEKADVLCPGGCPLEEFSVYGNIVYASVSSICGAAVHRGVISNSGGPVRVYSLPGRENYSSVDANGIQSQMLSRWSASFTVTLE >UniRef50_UPI000180C6CB(265-366:1114) PREDICTED: similar to predicted protein n=1 Tax=Ciona intestinalis RepID=UPI000180C6CB E=3e-13 s/c=0.75 id=28% cov=96% -----ITCHKTGAQIDNSNSIFRCPANCRfTSADKIVGHHWYHIASSVCFAAIHAGAIQKSkGGTIEFLKVGNGFVFEGLLANEINSTTKVEYAERFIVK SQ >UniRef50_B2WMJ6(148-257:610) LCCL domain containing protein n=2 Tax=Pleosporineae RepID=B2WMJ6_PYRTR E=2e-11 s/c=0.64 id=30% cov=87% --------------FSNTTFAFRCPAKCGDVqvlnphvvgplevnyRPLVIGSGVYRGDSFICASAIHAGIVDGiKGGSGRVNLVGAHDDFASTKRHGIE SIPFdSSFPLSFSVVLD >UniRef50_B9PL47(721-810:1004) LCCL domain-containing protein, putative n=4 Tax=Toxoplasma gondii RepID=B9PL47_TOXGO E=1e-07 s/c=0.64 id=27% cov=81% ------TCDATVESIPEilpleegDQIVAVCPQHCVKSlEGSAYGTGVYAPGSTLCTAGVHAGICdgTETACEILVTIGGPKSAFKGTRNHGVASS---- ---------- >UniRef50_C3Z5M7(474-569:1799) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Z5M7_BRAFL E=5e-28 s/c=1.30 id=31% cov=96% -----VTCSTRADYRDDMRYQVYCPPGCVSNYHFLWGTGIYTDDSYICVAALHDGRITNeHGGRVTVIKSDGLTSYQGSTQNGVTSSSYGDWTSHYSFAF D >UniRef50_Q8I252(752-840:1029) Putative uncharacterized protein n=3 Tax=Plasmodium RepID=Q8I252_PLAF7 E=4e-17 s/c=1.00 id=31% cov=83% ----------------GDKFLITCDPNCLDNlSGEVYGSDVYSIDSSICKASIHAGVCniqNKHNCKFLIIINEKQKNYIGTLQNRILSLNQSNNSNlSF TFS-- >UniRef50_A7ATR4(795-902:1597) LCCL domain-containing protein CCP2, putative n=1 Tax=Babesia bovis RepID=A7ATR4_BABBO E=2e-14 s/c=0.74 id=25% cov=77% -----------------------CPQNCSLNSDDLEceggNDGLYSIRTPICIAAIHSGEYSRNV-TLEVKKAAAPTEFEGFYQNGIESTSVPSMVGDVA FTVE >UniRef50_B6JWU3(201-276:316) Putative uncharacterized protein n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWU3_SCHJY E=5e-06 s/c=0.69 id=26% cov=70% ----------------------------RLSKREIWGTDVYTDDSDIVTILAHRGYFSLlkpvvEDAVVDLHVLPPLMEYKGTRTNRIESRSWSTPHDGM SI--- >UniRef50_Q4U8P9(281-387:1197) Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4U8P9_THEAN E=5e-18 s/c=0.86 id=31% cov=98% TSPLDVMCNTRAVDIYSGTFvkpfnvTVRCPMNCNNDPlMSIEGSSIHPSSTSICGAAIYDGVTTPSGGQVVISIVQSMaKYFGGTGSNGLKSEDYEPPA dkNNFSF--- >UniRef50_D2VUM7(73-147:302) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VUM7_NAEGR E=6e-09 s/c=0.82 id=23% cov=61% ----------------------------------IFGTDIYSDSTDIILACQHMGLLQDlplsnsKGILVTVLIEKPPSKYEATFRNNVRSRSWTNISHS ------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 1335 728 * * * 1 0 * * * * * * 2629 0 0 A 2 1471 * * * * * * * * * * * * * * 958 3004 * * * 2 0 * * * * * * 3145 0 0 P 3 * * * * * * * * * * * * 238 * * * * 2715 * * 3 0 * * * * * * 3760 0 0 I 4 * * 4092 * 4170 4162 * 1424 * 2388 * * * * 4096 4092 4347 3322 * * 4 0 * * * * * * 4193 0 0 A 5 1098 * 4139 4682 * * * * 4780 3622 * 4743 4692 3621 * 3575 3675 * * * 5 42 * 5138 * * * * 4598 0 0 I 6 * * * * * * * 1565 * 1903 * * * 5125 * * * 1451 * * 6 0 * * * * 0 * 4963 0 1000 T 7 * * 3027 5442 * * * * 4514 * 4932 5153 5233 * 5437 1808 1271 * * * 7 0 * * * * * * 5093 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 5148 0 0 F 9 5872 5263 2498 3942 4948 4631 4297 * 5879 2986 * 3912 5843 * 4808 2298 4749 * * 3509 9 0 * * * * * * 5148 0 0 T 10 3132 * 2107 5963 5940 * * * 5295 4558 5340 * * * 5771 4139 1624 3152 * 5885 10 56 4712 * 2578 264 * * 5157 1545 0 R 11 * * 4238 4871 * * * 5620 3067 * * 3658 * 4666 1434 * 1927 5542 * * 11 50 4874 * 2394 304 * * 5154 1595 0 G 12 1542 * * * 4491 1298 5804 5691 * 3877 * * 5772 * * 4187 * 5215 * * 12 58 4675 * 1585 585 * * 5154 1637 0 L 13 3775 * 2917 3294 * 5622 * 5562 5593 3407 * 3275 * 5653 3216 2195 4633 4422 * * 13 23 5984 * 1000 1000 * * 5154 1000 0 D 14 5642 * 1246 * 3890 * 4179 * 3481 * * 4710 4737 2727 * 3652 * 5285 * 6148 14 75 4304 * 1964 427 * * 5151 1665 0 I 15 4471 * * * 1711 5007 * 1729 * 4438 3760 5997 * * 3866 * 4765 4778 * 4676 15 99 3918 * 2128 375 * * 5199 2288 0 R 16 5177 4789 3320 4093 4919 5883 5105 5587 3418 3776 * 4762 2532 6094 4823 3390 3106 6252 * 5227 16 77 4260 * 2339 318 * * 5258 1863 0 K 17 4532 6416 3240 2615 * 1595 5862 * 4246 6119 * 4118 * * 6143 3179 4009 5932 * * 17 148 3671 5708 2189 357 * * 5195 2676 0 E 18 3380 * 2409 2702 5916 3940 4181 5861 4792 * 6615 4433 5213 3661 * 3912 3152 * * 5039 18 0 * * * * 0 * 5161 0 1000 K 19 6385 * 5839 3769 * * 6218 4582 2727 * 6162 5017 * 3436 3116 3182 2154 3692 * 5259 19 38 5259 * 1807 486 * * 5208 1436 0 A 20 5622 * * 4815 1061 5162 * 3845 4973 4696 * * * 4918 * 5740 4547 3524 5856 3349 20 101 4153 6436 2251 340 * * 5257 1974 0 D 21 3356 * 4028 6383 4836 * * 4091 4475 2667 4436 4676 * 5250 3478 3115 2758 3871 * * 21 39 6349 6146 1585 585 * 0 5257 1000 1000 V 22 3047 * * * 3061 * * 3001 4409 3459 * * * * * * * 1060 * 5902 22 24 5938 * 0 * 963 1038 5269 1000 1433 L 23 6416 * 4983 3529 5184 * 5330 3109 3563 5327 * 4542 * 4725 3096 2845 3768 3548 * 3373 23 0 * * * * 0 * 5269 0 1000 C 24 * 0 * * * * * * * * * * * * * * * * * * 24 0 * * * * * * 5210 0 0 P 25 6479 * 5111 * * * 5497 * * 6263 * * 221 5292 * 5191 6173 * * * 25 0 * * * * * * 5210 0 0 G 26 1533 * 4898 5159 * 3999 6208 * 4843 * 5055 * 2356 3942 4757 3359 5135 6206 * 6035 26 0 * * * * * * 5210 0 0 G 27 5421 * 3785 5146 * 1413 4010 * 5697 5991 * 1924 * * 4641 4173 * * * 4494 27 115 5315 4271 1000 1000 * * 5210 1000 0 C 28 * 38 * * * 5279 * * * * * * * * * * * * * * 28 129 3546 * 937 1066 1009 991 5304 2940 2206 P 29 2335 * 4167 * 6281 3915 * 4523 5260 2818 6636 4944 5572 4892 3062 3034 4179 4557 * 5730 29 159 3576 5592 2930 203 592 1570 5314 2838 1724 L 30 4189 * 2478 2812 4881 5700 5284 * 4858 2980 * 3996 * 4235 5539 3043 4596 3866 * 6095 30 62 5788 5365 594 1568 0 * 5251 1508 1593 E 31 4620 * 4423 3933 * 4850 5021 4131 5238 4286 6544 3160 4381 5509 6363 2199 3645 3237 * 4701 31 201 3196 5584 2365 311 * 0 5305 3373 1414 E 32 3488 * 3820 3808 6365 3254 * * 2686 6649 * 4085 3568 4561 3956 3244 3257 6849 * 5843 32 42 5120 * 2358 313 390 2078 5191 1534 2193 F 33 3211 6385 3368 3552 5610 1872 4599 * 6156 6276 4906 4282 4528 4858 5432 4697 4460 5628 * 4438 33 57 4685 * 529 1703 * 0 5186 2175 1000 S 34 4655 * 3753 3543 7188 5159 6691 * 3363 4521 5043 5448 4057 4292 3634 2561 2827 4835 * 5338 34 74 4314 * 911 1095 * 0 5186 2316 1000 V 35 5593 * * * * * * 1966 * 3028 * * * * * 6545 5862 804 * * 35 0 * * * * * 0 5206 0 1000 Y 36 * * * 4227 3294 * 6473 3271 3923 * * * * * * 4383 5114 3959 1778 2112 36 30 5603 * 2000 415 * 0 5584 1000 1000 G 37 * * * * * 31 * * * * * 5574 * * * * * * * * 37 51 4837 * 1692 534 * 0 5444 2419 1000 N 38 5659 6514 3839 * * 4126 5472 * * 6582 6193 3848 * * * 1959 1093 * * * 38 84 4146 * 2725 237 * 0 5409 2419 1000 I 39 5887 * 2095 5946 6826 1806 4837 5503 3946 4949 5916 3883 * * 4466 5239 6458 5223 5708 3829 39 46 4999 * 1539 609 * 0 5411 1998 1000 V 40 6831 5932 * 5641 5946 8269 5574 1957 * 3571 5530 * 3797 6539 6681 6753 4064 1563 5192 5398 40 71 4386 * 1653 552 * 0 5169 2180 1000 Y 41 * * * * 4772 * 5096 * * * * * * * * * * * * 98 41 0 * * * * 0 * 5169 0 1000 A 42 3370 * 5294 * * * 4240 * 6685 * * 5752 5773 * 2190 1832 1845 * * * 42 0 * * * * * * 5179 0 0 S 43 3011 * 2026 3782 6247 2977 6322 4040 * 5208 4917 4573 3616 7184 6966 3629 4163 6801 * * 43 0 * * * * * * 5179 0 0 V 44 5009 * 1127 5487 6435 5922 6066 4529 4887 6806 * 3615 * 6295 4091 3879 3796 4340 * 5843 44 0 * * * * * * 5179 0 0 S 45 * * * * * * * * * * * * * * * 151 3335 * * * 45 0 * * * * * * 5179 0 0 S 46 4398 * 3409 6931 3987 5709 5936 * * 6822 * 5161 3237 6869 5051 1245 5187 5777 6926 3406 46 0 * * * * * * 5179 0 0 I 47 * * * * * * * 860 * 2157 * * 5561 * * * 6505 2375 * * 47 0 * * * * * * 5176 0 0 C 48 6456 161 * * * 5441 * 5714 * * * * * * * * * 4262 * * 48 0 * * * * * * 5176 0 0 G 49 2819 6758 * * 6131 3549 * 5547 2273 3176 4547 4942 6963 3959 3016 4269 4318 4752 * * 49 0 * * * * * * 5176 0 0 A 50 346 * * * * 6465 * 4938 * * * * * * * 2881 * 4906 * * 50 0 * * * * * * 5176 0 0 A 51 241 5714 * * * 4176 * * * 3927 * * * * * 6194 * * * * 51 0 * * * * * * 5176 0 0 V 52 5046 * * * 5708 * * 1219 * 2896 3784 * * 5714 * * 5508 1935 * 6434 52 0 * * * * * * 5176 0 0 H 53 * * * * 5091 * 177 6094 * * 5508 * * 6670 6693 * * * * 5066 53 0 * * * * * * 5176 0 0 R 54 1088 * 2646 * 6077 6290 6348 * * * 4718 5776 * 5933 5034 2807 4495 5796 * 5538 54 0 * * * * * * 5176 0 0 G 55 * * * * * 118 * * * * 5933 5243 * 5508 * 6179 * * * * 55 73 4692 6569 0 * * * 5176 2149 0 V 56 3340 * * 4562 * * 6182 3127 5061 3235 6786 6523 * 6686 3791 7073 4352 1520 4510 4519 56 8 7549 * 0 * 0 * 5168 1000 1000 I 57 * 3725 * * 4673 * * 1096 * 2144 6735 * * * * * 4840 3309 * 4450 57 110 3774 * 901 1106 * * 5176 2923 0 S 58 4136 * 3871 5591 * 4476 * * 3916 5482 6641 3893 3839 4277 3515 1985 2548 * * 6569 58 144 3503 7175 199 2955 * * 5176 3079 0 N 59 4002 * 2011 4427 * 4189 7052 6729 3745 5714 * 2036 3301 7359 4425 4423 5689 * 6196 * 59 303 2400 * 1142 871 0 * 5179 4163 1000 S 60 3299 * 4828 2900 5302 5754 4244 * 4018 5384 * 3745 * 3333 5708 2324 2779 6871 * * 60 273 2581 7519 0 * * * 5176 3728 0 G 61 3669 6731 5714 6490 6088 518 4813 * * * * 6189 * * * 4577 4482 4934 * * 61 51 * 4846 * * 0 * 5184 0 1000 G 62 5695 4204 * * * 326 * 5654 5476 5320 * 6421 * 6075 6686 6264 * * * 6397 62 75 4792 6127 3445 139 0 * 5112 1672 1475 P 63 4206 3383 5120 2986 6732 4957 6782 5710 5051 2909 6667 4119 5421 5172 3405 4834 3272 3620 6258 5968 63 0 * * * * 0 * 5163 0 1000 V 64 3792 4539 * * 3645 4198 * 2746 * 3460 6307 * * * * 6895 6459 1065 * * 64 0 * * * * * * 5176 0 0 R 65 6792 * 3795 3579 6474 4624 3902 3850 4740 4515 7022 5165 * 4528 4361 4099 1866 3242 * * 65 0 * * * * * * 5176 0 0 V 66 5982 * * * 5454 6701 * 2116 * 3049 5729 * * * * * * 810 * 6474 66 0 * * * * * * 5176 0 0 Y 67 4599 * * 2960 * 6971 4766 4725 3425 3700 5751 5253 * 4523 2564 4645 2763 3877 7114 4114 67 14 * 6732 * * * * 5165 0 0 S 68 4592 * * * 4046 * * 2503 2221 3147 5518 4209 5313 5828 3366 5236 4920 3168 * 7021 68 0 * * * * 0 * 5162 0 1000 L 69 4090 * * 3580 * 3876 5863 4650 4684 2667 4697 4960 * 4540 3443 4202 3832 2520 * 4976 69 0 * * * * * * 5165 0 0 P 70 3877 * 3886 4189 * 1890 6849 * 3596 5358 * 4725 2227 5647 4435 4461 5051 5454 * 6963 70 26 5831 * 821 1204 * * 5165 1518 0 G 71 3507 * * 4137 * 1321 * * 4843 6521 6840 4507 2643 4546 4897 3595 5145 * 6793 * 71 36 5358 * 0 * * * 5165 1670 0 R 72 4376 * * * * 4957 4700 4282 3545 2689 4228 6335 3924 1919 3661 5380 7042 4759 * 4461 72 47 4950 * 425 1969 * * 5165 1635 0 E 73 4251 * 2689 3385 5144 5254 5645 * 3341 5042 5056 3392 3775 6056 4771 3457 3215 5044 * 6147 73 17 6455 * 3907 100 * * 5165 1000 0 N 74 4500 * 4066 3651 5070 * 4718 5124 4669 4322 7029 3456 * 4093 3834 1685 5927 6115 * 4028 74 11 6992 * 0 * * * 5165 1000 0 Y 75 * * * * 1398 * 5667 * * 6242 * * 6334 * * 5970 * * * 838 75 0 * * * * * * 5155 0 0 S 76 4333 * 4408 2717 5481 4047 4745 4389 3741 3942 5586 4912 3679 5652 7090 4824 2952 3707 * 4539 76 11 7018 * 2585 263 * * 5209 1000 0 S 77 2999 * * 6948 * 708 * * 6250 * * 5944 6483 6148 * 2644 5752 * 5533 * 77 34 5426 * 1000 1000 * * 5209 1000 0 V 78 5839 6837 7154 6180 4416 7133 * 6791 4907 6087 6280 5878 * * 5867 1031 1941 4471 * * 78 68 5042 6002 2000 415 * * 5209 1495 0 D 79 5213 * 4207 3750 3739 4566 5747 5823 3905 3044 6435 5412 6407 7023 3655 3731 2165 7033 * 3981 79 69 4428 * 0 * 0 * 5145 2257 1000 A 80 2501 * * 5417 * 5151 7153 * 3435 6783 5974 5142 * 2123 1724 3893 5695 * * * 80 0 * * * * * * 5153 0 0 N 81 * * * 5813 5682 * 3354 * * * * 365 * * * 6175 4650 * * 4838 81 29 5633 * 0 * * * 5153 1433 0 G 82 5711 * 5444 4944 * 435 * * * * * 2856 * * 4916 * 6100 * * * 82 22 6034 * 1585 585 * * 5153 1000 0 I 83 * * * * 5534 * * 1095 * 4481 5873 * * * * * 6034 1264 5891 * 83 0 * * * * * * 5153 0 0 Q 84 6245 * 6089 3468 6805 7319 5761 6490 2896 3976 * 4185 * 3153 3582 3341 1999 5398 5991 * 84 0 * * * * * * 5236 0 0 S 85 5869 * * * * * * * * 6115 * * * * * 155 3829 * * * 85 0 * * * * * * 5224 0 0 Q 86 5001 * 6422 3350 6563 * 4748 3985 4108 3731 5580 4384 * 3697 2535 2949 3362 4720 * 4980 86 0 * * * * * * 5342 0 0 M 87 3256 * 2700 4796 4950 3763 5743 * 4962 6259 4922 3612 4616 5376 * 1822 3988 6617 * * 87 11 * 7061 * * * * 5382 0 0 L 88 * 6301 5615 6405 2389 4028 4069 6097 4322 3431 * * * 5786 5554 4542 4922 4543 2828 2419 88 93 3996 * 0 * 0 * 5337 2288 1000 S 89 * * 4095 4731 * 1410 * 5186 5624 4987 * 4038 3846 * * 2244 3890 5551 * 5799 89 77 4576 6672 375 2126 * * 5420 2004 0 R 90 4146 * 5665 5440 5522 * 6494 * 5037 6040 * 3861 3139 3987 3547 1480 3313 6143 * 5785 90 91 4032 * 0 * 0 * 5457 2407 1000 W 91 * * * 5897 3152 * 5432 4517 * 5182 5002 5590 3478 * * 3448 5105 6068 2100 1912 91 57 4678 * 0 * * * 5437 2023 0 S 92 3041 * 3210 6109 5053 3346 3305 5736 6180 4196 * 4578 2500 4727 6126 3532 4727 4868 * 6663 92 44 5048 * 1000 1000 * * 5389 1000 0 A 93 4214 5717 4284 4725 * 2993 5339 * 3459 3706 6402 2986 5311 * 2883 3560 3277 4911 * * 93 50 4876 * 0 * * * 5389 1610 0 S 94 3543 * 4841 5806 * 3925 6679 * * * * 5035 * * 4667 511 6126 * * * 94 14 6737 * 0 * * * 5348 1000 0 F 95 * * * * 259 * * 5341 * 5535 4994 * * * * * * 4787 * 4309 95 0 * * * * * * 5316 0 0 T 96 3629 * 6186 4300 * 6780 6255 3695 3977 5862 4039 * * 4075 3805 2554 2558 2807 * * 96 0 * * * * * * 5291 0 0 V 97 * * * * 859 * * 2409 * 3553 * * * * * * * 2699 * 5569 97 0 * * * * * * 5259 0 0 T 98 2450 * * 4906 * * * * 2928 5114 * * * * * 1761 1785 4709 * * 98 0 * * * * * * 4628 0 0 L 99 3781 * 2896 * 4055 4217 * 3996 4052 2447 * * 4160 4178 * 3552 * 2505 * * 99 0 * * * * * * 3980 0 0 E 100 * * 2724 676 * * * * * * * * * 2168 * * * * * * 100 0 * * 0 * * * 3832 0 0 //